Query 006286
Match_columns 652
No_of_seqs 206 out of 830
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 21:04:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 8E-217 2E-221 1810.8 56.4 645 3-652 138-785 (785)
2 PLN00149 potassium transporter 100.0 1E-214 3E-219 1794.4 56.8 635 3-652 138-779 (779)
3 PLN00151 potassium transporter 100.0 5E-214 1E-218 1787.0 56.1 629 3-652 215-852 (852)
4 PLN00150 potassium ion transpo 100.0 5E-213 1E-217 1779.2 55.8 625 3-652 155-779 (779)
5 TIGR00794 kup potassium uptake 100.0 3E-192 6E-197 1603.8 53.2 579 3-652 109-688 (688)
6 PRK10745 trkD potassium transp 100.0 8E-173 2E-177 1427.9 48.5 524 14-652 96-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 1E-165 2E-170 1361.1 35.4 459 5-467 76-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 1E-157 2E-162 1279.1 44.8 526 14-651 101-626 (627)
9 TIGR00911 2A0308 L-type amino 88.8 1.1 2.3E-05 50.6 7.3 87 62-152 165-255 (501)
10 COG0531 PotE Amino acid transp 81.9 14 0.0003 40.4 11.6 176 61-243 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 80.9 22 0.00048 38.9 12.8 168 64-244 135-317 (429)
12 TIGR03813 put_Glu_GABA_T putat 78.5 42 0.0009 37.7 14.2 19 343-361 434-452 (474)
13 PRK10435 cadB lysine/cadaverin 77.9 49 0.0011 36.8 14.4 23 65-87 124-146 (435)
14 TIGR00907 2A0304 amino acid pe 77.7 17 0.00037 40.7 10.9 25 63-87 144-168 (482)
15 PRK10655 potE putrescine trans 75.8 62 0.0013 35.8 14.4 43 64-106 125-170 (438)
16 TIGR00930 2a30 K-Cl cotranspor 73.2 29 0.00063 43.2 12.0 25 62-86 203-227 (953)
17 PF13520 AA_permease_2: Amino 69.0 19 0.00042 39.2 8.4 252 32-299 85-366 (426)
18 PRK15049 L-asparagine permease 69.0 50 0.0011 37.7 11.9 23 64-86 146-168 (499)
19 TIGR00906 2A0303 cationic amin 67.0 1.2E+02 0.0026 35.3 14.6 45 62-106 161-208 (557)
20 PRK11021 putative transporter; 64.7 1.7E+02 0.0036 32.2 14.6 27 62-88 115-141 (410)
21 TIGR03810 arg_ornith_anti argi 62.2 1.3E+02 0.0029 33.7 13.6 44 201-244 274-317 (468)
22 KOG3145 Cystine transporter Cy 59.6 16 0.00034 39.7 5.2 89 65-164 212-340 (372)
23 TIGR00905 2A0302 transporter, 59.0 49 0.0011 37.2 9.4 25 63-87 130-154 (473)
24 TIGR01773 GABAperm gamma-amino 54.3 3.2E+02 0.007 30.3 14.8 45 64-108 128-175 (452)
25 PF14362 DUF4407: Domain of un 53.8 1.2E+02 0.0025 32.3 10.8 54 282-335 13-70 (301)
26 TIGR00910 2A0307_GadC glutamat 52.4 2.1E+02 0.0045 32.8 13.2 46 140-185 202-249 (507)
27 TIGR00908 2A0305 ethanolamine 50.2 93 0.002 34.4 9.7 24 64-87 123-146 (442)
28 PRK10238 aromatic amino acid t 47.1 1.2E+02 0.0025 34.1 9.9 113 65-181 129-250 (456)
29 PRK10746 putative transport pr 46.7 2.2E+02 0.0048 32.0 12.1 25 343-367 427-451 (461)
30 PRK10249 phenylalanine transpo 45.9 1.7E+02 0.0038 32.8 11.1 102 65-168 138-247 (458)
31 PRK11357 frlA putative fructos 43.8 2.7E+02 0.0058 30.9 12.1 45 63-107 128-175 (445)
32 COG4059 MtrE Tetrahydromethano 40.5 26 0.00057 36.6 3.2 30 338-367 257-286 (304)
33 TIGR00913 2A0310 amino acid pe 39.8 5.1E+02 0.011 28.9 13.6 22 344-365 443-464 (478)
34 PF06570 DUF1129: Protein of u 39.6 1.3E+02 0.0027 30.5 8.0 21 342-362 179-199 (206)
35 KOG3643 GABA receptor [Signal 38.5 26 0.00057 39.8 3.1 90 237-330 225-324 (459)
36 PRK11387 S-methylmethionine tr 38.3 2.3E+02 0.005 31.8 10.6 21 66-86 133-153 (471)
37 PRK10644 arginine:agmatin anti 37.1 1.7E+02 0.0037 32.5 9.2 24 64-87 127-150 (445)
38 PRK10580 proY putative proline 34.1 3.2E+02 0.007 30.5 10.9 24 342-365 424-447 (457)
39 TIGR03428 ureacarb_perm permea 32.0 7.8E+02 0.017 27.7 16.4 26 62-87 144-169 (475)
40 PF00324 AA_permease: Amino ac 31.6 40 0.00087 37.7 3.2 35 135-169 203-239 (478)
41 KOG4742 Predicted chitinase [G 29.6 24 0.00052 38.0 0.9 31 155-194 172-207 (286)
42 PRK11049 D-alanine/D-serine/gl 24.6 7.6E+02 0.016 27.8 11.7 106 138-244 217-333 (469)
43 PRK05151 electron transport co 24.1 2.2E+02 0.0048 29.1 6.6 47 263-309 15-63 (193)
44 PF05297 Herpes_LMP1: Herpesvi 23.2 27 0.00059 37.7 0.0 60 306-368 126-190 (381)
45 PF05313 Pox_P21: Poxvirus P21 22.7 96 0.0021 31.5 3.7 60 166-236 89-149 (189)
46 PF05545 FixQ: Cbb3-type cytoc 22.5 76 0.0017 25.0 2.4 29 351-379 19-47 (49)
47 cd05900 Ig_Aggrecan Immunoglob 21.8 1E+02 0.0022 28.4 3.5 27 444-470 76-102 (112)
48 TIGR01940 nqrE NADH:ubiquinone 21.6 3E+02 0.0065 28.4 7.0 47 263-309 14-62 (200)
49 PRK13108 prolipoprotein diacyl 21.5 3.8E+02 0.0083 30.9 8.6 20 284-303 23-42 (460)
50 PF06155 DUF971: Protein of un 21.3 54 0.0012 28.7 1.5 15 621-635 25-39 (89)
51 PF02508 Rnf-Nqr: Rnf-Nqr subu 20.2 4E+02 0.0086 27.1 7.5 47 263-309 15-63 (190)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=8.2e-217 Score=1810.77 Aligned_cols=645 Identities=61% Similarity=1.056 Sum_probs=586.8
Q ss_pred CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhccccc
Q 006286 3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTH 82 (652)
Q Consensus 3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~ 82 (652)
+.++|++||+|+++|++++++|++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++||+||+
T Consensus 138 ~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~ 217 (785)
T PLN00148 138 SSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTH 217 (785)
T ss_pred hhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccH
Confidence 35689999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccc
Q 006286 83 RVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGS 162 (652)
Q Consensus 83 kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~ 162 (652)
|||++|||||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|
T Consensus 218 kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~ 297 (785)
T PLN00148 218 RVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAAS 297 (785)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCC
Q 006286 163 IKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFP 242 (652)
Q Consensus 163 Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fP 242 (652)
||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 298 Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fP 377 (785)
T PLN00148 298 IRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFP 377 (785)
T ss_pred eEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 006286 243 RVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVL 322 (652)
Q Consensus 243 r~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~ 322 (652)
|+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|++
T Consensus 378 rvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~ 457 (785)
T PLN00148 378 RVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLL 457 (785)
T ss_pred CceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeC
Q 006286 323 FFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTE 402 (652)
Q Consensus 323 ~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~ 402 (652)
+|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||+
T Consensus 458 ~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~ 537 (785)
T PLN00148 458 FFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSE 537 (785)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred CCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHHH
Q 006286 403 LANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMS 482 (652)
Q Consensus 403 ~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~ 482 (652)
+++|+|++|.||++|+|++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.+++++|||++|+++
T Consensus 538 ~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~ 617 (785)
T PLN00148 538 LATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQS 617 (785)
T ss_pred CCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHHHHhhhccCC-C-C-CCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCC
Q 006286 483 IAEFIQMEAEGFT-N-L-DAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPD 559 (652)
Q Consensus 483 L~~FI~~e~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~ 559 (652)
|++|||+|+.+.+ + + .+++|++++++++++..+++....+++ +..+..+.. .+ +.+.+.++.++.++.++++
T Consensus 618 L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 692 (785)
T PLN00148 618 IAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQ---ELADIDDSI-QS-SKSLTLQSLQSAYEDENPG 692 (785)
T ss_pred HHHHHHhhhhccccccccccccccccccccccccccccccccccc---ccccccccc-cc-ccccccccccccccccccc
Confidence 9999999975321 0 1 111144566654433211110000000 000000000 00 0111222334444444454
Q ss_pred CCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccC
Q 006286 560 LNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIP 639 (652)
Q Consensus 560 ~~~~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IP 639 (652)
..++++++|+.+++.+.+++++||+++|++|||+||+||+||++|||||+|+|+||++||++|+|||||||+|.++|+||
T Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IP 772 (785)
T PLN00148 693 QSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIP 772 (785)
T ss_pred cccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCC
Confidence 45677888876655556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeeEEEC
Q 006286 640 HICLIEVGINYYL 652 (652)
Q Consensus 640 h~~LlEVGmvY~v 652 (652)
|+|||||||+|||
T Consensus 773 h~~LleVGM~Y~V 785 (785)
T PLN00148 773 HISLIEVGMIYYV 785 (785)
T ss_pred hHHeEEcceEEEC
Confidence 9999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.4e-214 Score=1794.44 Aligned_cols=635 Identities=51% Similarity=0.930 Sum_probs=575.6
Q ss_pred CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCccee-ehhHHHHHHHHHhhhcccc
Q 006286 3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMV-VFLACLVLIGHFVLQYRGT 81 (652)
Q Consensus 3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~v-v~is~~ILv~LF~~Q~~GT 81 (652)
+.++|++||+|+.+|++++++|++|+||+||||+|||||||||||||||+..|...++++ |||||+||++||++||+||
T Consensus 138 ~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT 217 (779)
T PLN00149 138 GSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGT 217 (779)
T ss_pred hhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhcccc
Confidence 367999999999999999999999999999999999999999999999999976444455 9999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCcc
Q 006286 82 HRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAG 161 (652)
Q Consensus 82 ~kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~ 161 (652)
+|||++|||||++||++||++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++
T Consensus 218 ~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~ 297 (779)
T PLN00149 218 HRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQL 297 (779)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeehhhhhhhHHHHhccccchhhccccc---cccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHc
Q 006286 162 SIKLAFCCIVFPCLVLQYMGQAAFLSKNFS---AAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYAL 238 (652)
Q Consensus 162 ~Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~---~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~L 238 (652)
|||+||+++|||||+|||+||||||++||+ +.+||||+++|+|++||++++||+||||||||+|||+||+++||++|
T Consensus 298 ~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~L 377 (779)
T PLN00149 298 SIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSAL 377 (779)
T ss_pred ceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999996 56679999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHH
Q 006286 239 GCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLAL 318 (652)
Q Consensus 239 g~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~ 318 (652)
|||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||+++++
T Consensus 378 g~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~ 457 (779)
T PLN00149 378 GCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAI 457 (779)
T ss_pred CCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEE
Q 006286 319 LYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGL 398 (652)
Q Consensus 319 ~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~v 398 (652)
+|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+
T Consensus 458 ~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~v 537 (779)
T PLN00149 458 CFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGL 537 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred EEeCCCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHH
Q 006286 399 LFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFEND 478 (652)
Q Consensus 399 f~t~~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~ 478 (652)
|||++.+|+|++|.||++|+|++||++||+|||++|+|+||++|||+++|+++++||+|||++||||||..++++|||++
T Consensus 538 f~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~ 617 (779)
T PLN00149 538 IHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKD 617 (779)
T ss_pred EEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHhhhccCCC-C--CCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhccccc
Q 006286 479 IVMSIAEFIQMEAEGFTN-L--DAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQ 555 (652)
Q Consensus 479 lv~~L~~FI~~e~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~ 555 (652)
|+++|++|||+|+.+.+. + ..++|++++++++++..+++....+++ . .. . .+ .++++.++.++. +.
T Consensus 618 Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~---~-~~-~~~~~~~~~~~~-~~ 686 (779)
T PLN00149 618 LVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGIQLREDD----S-DK---Q-EP-AGTSELREIRSP-PV 686 (779)
T ss_pred HHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccc----c-cc---c-cc-ccccccccccCc-cc
Confidence 999999999999743211 1 111245666665433221110000000 0 00 0 00 011111111111 11
Q ss_pred CCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcc
Q 006286 556 ESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVF 635 (652)
Q Consensus 556 ~~~~~~~~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~ 635 (652)
+ ..++++||+.+++.+.+++++||+++|++|||+||+||+||++|||||+|||+||++|||+|+|||||||+|.++
T Consensus 687 ~----~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~ 762 (779)
T PLN00149 687 S----RPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYA 762 (779)
T ss_pred c----CcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccc
Confidence 1 223678887766666678999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeEEeeeEEEC
Q 006286 636 LNIPHICLIEVGINYYL 652 (652)
Q Consensus 636 L~IPh~~LlEVGmvY~v 652 (652)
|+|||+|||||||+|||
T Consensus 763 L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 763 LSVPHASTLEVGMVYHV 779 (779)
T ss_pred cCCChHHeEEeceEEEC
Confidence 99999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=4.6e-214 Score=1787.01 Aligned_cols=629 Identities=42% Similarity=0.757 Sum_probs=566.5
Q ss_pred CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhccccc
Q 006286 3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTH 82 (652)
Q Consensus 3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~ 82 (652)
++++|++||+|+++|+++++++++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++|||||+
T Consensus 215 ~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~ 294 (852)
T PLN00151 215 SLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTS 294 (852)
T ss_pred hHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccch
Confidence 55799999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccc
Q 006286 83 RVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGS 162 (652)
Q Consensus 83 kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~ 162 (652)
|||++|||||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|
T Consensus 295 kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~s 374 (852)
T PLN00151 295 KVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRS 374 (852)
T ss_pred hhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCC
Q 006286 163 IKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFP 242 (652)
Q Consensus 163 Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fP 242 (652)
||+||+++|||||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||+|||+||+++||++|||||
T Consensus 375 Iqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fP 454 (852)
T PLN00151 375 IQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFP 454 (852)
T ss_pred eeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 006286 243 RVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVL 322 (652)
Q Consensus 243 r~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~ 322 (652)
|+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|++
T Consensus 455 RvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~ 534 (852)
T PLN00151 455 RLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPV 534 (852)
T ss_pred CceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeC
Q 006286 323 FFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTE 402 (652)
Q Consensus 323 ~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~ 402 (652)
+|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||+
T Consensus 535 ~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~ 614 (852)
T PLN00151 535 VFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNE 614 (852)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred CCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCC-CchhhHHHHHH
Q 006286 403 LANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPN-SGDDFENDIVM 481 (652)
Q Consensus 403 ~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~-~~~~f~~~lv~ 481 (652)
+++|+|++|.||++|+|++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.++ +++|||++|++
T Consensus 615 ~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~ 694 (852)
T PLN00151 615 LVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIE 694 (852)
T ss_pred CCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 77899999999
Q ss_pred HHHHHHHhhhccCCCCCCCC----CC---cceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhh-hhhccc
Q 006286 482 SIAEFIQMEAEGFTNLDAPV----DG---WLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQ-KLQSMY 553 (652)
Q Consensus 482 ~L~~FI~~e~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~s~~ 553 (652)
+|++|||+|+.....+.+++ ++ +++.....+..... + .+... .+...+++...+ +.++.
T Consensus 695 ~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~---~~~~~~~~~~~~~~~~~~- 761 (852)
T PLN00151 695 SLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVY----S-----LGVPL---LADYRLTSKPIPEASTSE- 761 (852)
T ss_pred HHHHHHHhhhhhccccccccccccccccccccccccCCCcccc----c-----ccccc---cccccccccccccccccc-
Confidence 99999999974321000000 00 11111110000000 0 00000 000000000000 00110
Q ss_pred ccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCC
Q 006286 554 EQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPA 633 (652)
Q Consensus 554 ~~~~~~~~~~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~ 633 (652)
+.+.+ ..+++++ .+.+++++||+++|++|||+||+||+||++|||||+|+|+||++||++|+|||||||+|.
T Consensus 762 ~~~~~---~~~~~~~-----~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~ 833 (852)
T PLN00151 762 EVSPV---LPSSSMS-----SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGI 833 (852)
T ss_pred ccccc---ccccccc-----cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcc
Confidence 00111 0123333 223578999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeEEeeeEEEC
Q 006286 634 VFLNIPHICLIEVGINYYL 652 (652)
Q Consensus 634 ~~L~IPh~~LlEVGmvY~v 652 (652)
++|+|||++|+||||+|||
T Consensus 834 ~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 834 ANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred cccCCChHHeEEeceEEEC
Confidence 9999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=4.7e-213 Score=1779.17 Aligned_cols=625 Identities=45% Similarity=0.848 Sum_probs=568.1
Q ss_pred CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhccccc
Q 006286 3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTH 82 (652)
Q Consensus 3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~ 82 (652)
..++|++||+|+.+|++++++|++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++||+||+
T Consensus 155 ~~~~k~~lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~ 234 (779)
T PLN00150 155 KTRIQRKLENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTH 234 (779)
T ss_pred hhHHHHhhhcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccch
Confidence 34589999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccc
Q 006286 83 RVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGS 162 (652)
Q Consensus 83 kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~ 162 (652)
|||++|||||++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|
T Consensus 235 kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~ 314 (779)
T PLN00150 235 KVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKS 314 (779)
T ss_pred hhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCC
Q 006286 163 IKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFP 242 (652)
Q Consensus 163 Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fP 242 (652)
||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 315 Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fP 394 (779)
T PLN00150 315 MQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFP 394 (779)
T ss_pred eeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 006286 243 RVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVL 322 (652)
Q Consensus 243 r~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~ 322 (652)
|+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|++
T Consensus 395 rvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~ 474 (779)
T PLN00150 395 RVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFT 474 (779)
T ss_pred CceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeC
Q 006286 323 FFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTE 402 (652)
Q Consensus 323 ~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~ 402 (652)
+|+++|++|||||+.|||||||+||++|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||+
T Consensus 475 ~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~ 554 (779)
T PLN00150 475 VFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTD 554 (779)
T ss_pred HHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred CCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHHH
Q 006286 403 LANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMS 482 (652)
Q Consensus 403 ~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~ 482 (652)
+++|+|++|.||++|||++||++||+|||++|+|+||++|||+++++++++||+|||++||||||+.++++|||++|+++
T Consensus 555 ~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~Lves 634 (779)
T PLN00150 555 LAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIAS 634 (779)
T ss_pred CCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCCC
Q 006286 483 IAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNY 562 (652)
Q Consensus 483 L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~ 562 (652)
|++|||+|+.+.+ . + ++++++..+++...+. .++ .. .. . ++..+.+.++.++..+.+.+ .
T Consensus 635 L~~FIr~e~~~~~-~--~-~~~~~~~~~~~~~~~~-----~~~--~~-~~---~--~~~~~~~~~~~~~~~~~~~~---~ 694 (779)
T PLN00150 635 LERFIEIESFREQ-S--D-LESMAASWTPEELMGE-----GNS--VG-SG---L--FTQYDQSDINFATSQEWKRP---S 694 (779)
T ss_pred HHHHHHhhhhccc-c--c-cccccccccccccccc-----CCc--cc-cc---c--cccccccccccccccccccc---c
Confidence 9999999974311 1 1 1122222211100000 000 00 00 0 00000011111211111111 1
Q ss_pred CCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccCCCC
Q 006286 563 RPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHIC 642 (652)
Q Consensus 563 ~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~ 642 (652)
++++++ ++.+++++||+++|++|||+||+||+||++|||||+|||+||++||++|+|||||||+|.++|+|||+|
T Consensus 695 ~~~~~~-----~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~ 769 (779)
T PLN00150 695 SQEDSV-----SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHEC 769 (779)
T ss_pred cccccc-----ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHH
Confidence 223333 223478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeeEEEC
Q 006286 643 LIEVGINYYL 652 (652)
Q Consensus 643 LlEVGmvY~v 652 (652)
|+||||+|||
T Consensus 770 LleVGmvY~V 779 (779)
T PLN00150 770 LLKVGMVYYV 779 (779)
T ss_pred eEEeceEEEC
Confidence 9999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2.8e-192 Score=1603.82 Aligned_cols=579 Identities=41% Similarity=0.765 Sum_probs=550.1
Q ss_pred CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhccccc
Q 006286 3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTH 82 (652)
Q Consensus 3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~ 82 (652)
..++|+++|++++.|++++++|++|+||++|||+||||||||||||||+++.|++++++|+||||+||++||++||+||+
T Consensus 109 ~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~ 188 (688)
T TIGR00794 109 TTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTA 188 (688)
T ss_pred hhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccH
Confidence 45789999999888899999999999999999999999999999999999999998889999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccc
Q 006286 83 RVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGS 162 (652)
Q Consensus 83 kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~ 162 (652)
|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|
T Consensus 189 kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~ 268 (688)
T TIGR00794 189 KVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLP 268 (688)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCC
Q 006286 163 IKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFP 242 (652)
Q Consensus 163 Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fP 242 (652)
||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 269 Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~P 348 (688)
T TIGR00794 269 IQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFP 348 (688)
T ss_pred ceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 006286 243 RVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVL 322 (652)
Q Consensus 243 r~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~ 322 (652)
|+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++||++||+|+++||+.+||||++++++|++
T Consensus 349 r~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~ 428 (688)
T TIGR00794 349 RVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLL 428 (688)
T ss_pred CceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHH-hccCCCCCccCCcEEEEe
Q 006286 323 FFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILA-QGSSLGIVRVPGIGLLFT 401 (652)
Q Consensus 323 ~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rvpG~~vf~t 401 (652)
+|+.+|+.|||||+.|++||||+||++|++++++|++|+||++++++++.+|++|++++++ +.++.++.|+||+|+|||
T Consensus 429 ~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t 508 (688)
T TIGR00794 429 VFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYS 508 (688)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEee
Confidence 9999999999999999999999999999999999999999999999999999999999987 444455689999999999
Q ss_pred CCCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHH
Q 006286 402 ELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVM 481 (652)
Q Consensus 402 ~~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~ 481 (652)
++++++|+++.||++|||++||++||+||+++|+|+||++|||+++++++++ |+|||++||||||+++.+++|++++++
T Consensus 509 ~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~ 587 (688)
T TIGR00794 509 NLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVN 587 (688)
T ss_pred CCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999754 899999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCC
Q 006286 482 SIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLN 561 (652)
Q Consensus 482 ~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~ 561 (652)
+|++||+++... +.. + ++ . . + + +
T Consensus 588 ~L~~fi~~~~~~--~~~-----------~------------~~----~------~------~----------~---~--- 610 (688)
T TIGR00794 588 SIVEFVEHECGF--NLN-----------N------------LE----E------L------S----------D---K--- 610 (688)
T ss_pred HHHHHHHHHhhh--ccc-----------c------------cc----c------c------c----------c---c---
Confidence 999999986421 000 0 00 0 0 0 0 0
Q ss_pred CCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccCCC
Q 006286 562 YRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHI 641 (652)
Q Consensus 562 ~~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~ 641 (652)
++ +.+.+||++++++++|+||+|++||++++++++|+++||..||++|.|||||||++...++|||+
T Consensus 611 -----~~--------~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~ 677 (688)
T TIGR00794 611 -----RC--------RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPD 677 (688)
T ss_pred -----cc--------ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChh
Confidence 00 01257899999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeeeEEEC
Q 006286 642 CLIEVGINYYL 652 (652)
Q Consensus 642 ~LlEVGmvY~v 652 (652)
|++||||.||+
T Consensus 678 rvvevG~~~~i 688 (688)
T TIGR00794 678 RLLEVGTVVEI 688 (688)
T ss_pred hEEEEeeEEEC
Confidence 99999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=8.5e-173 Score=1427.91 Aligned_cols=524 Identities=29% Similarity=0.519 Sum_probs=496.2
Q ss_pred cccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhcccccchhhhhhhHHH
Q 006286 14 KKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVI 93 (652)
Q Consensus 14 ~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~ 93 (652)
+++|.+++++|++|+||++|||+|||||||||||||||+..|+++ ++|+||||+||++||++||+||+|||++|||||+
T Consensus 96 ~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~ 174 (622)
T PRK10745 96 ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIML 174 (622)
T ss_pred cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcccccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHH
Confidence 445668999999999999999999999999999999999999996 5999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccceeeehhhhhhh
Q 006286 94 LWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFP 173 (652)
Q Consensus 94 ~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~Iriaw~~~V~P 173 (652)
+||++||++|+|||++ ||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||
T Consensus 175 vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P 253 (622)
T PRK10745 175 TWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLP 253 (622)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHH
Confidence 9999999999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcceEEecCCcc
Q 006286 174 CLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWV 253 (652)
Q Consensus 174 ~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~ 253 (652)
||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||+++
T Consensus 254 ~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~ 333 (622)
T PRK10745 254 SLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEME 333 (622)
T ss_pred HHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 006286 254 RGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLS 333 (652)
Q Consensus 254 ~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~s 333 (652)
+||||||+|||+||++|++++++||||+|||+|||+||++||++||+|++++++.+|+|+++++++++++|+.+|+.||+
T Consensus 334 ~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~ 413 (622)
T PRK10745 334 SGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFS 413 (622)
T ss_pred CCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeCCCCCCchhhhh
Q 006286 334 SACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTH 413 (652)
Q Consensus 334 a~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h 413 (652)
||+.|++||||+|+++|++++++|++|++|++++++++.+++++++++++..++.++.|+||+|+|+|+.++++|+++.|
T Consensus 414 anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h 493 (622)
T PRK10745 414 ANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLH 493 (622)
T ss_pred HHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999998887777779999999999999999999999
Q ss_pred hhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHHHHHHHHHhhhcc
Q 006286 414 FLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG 493 (652)
Q Consensus 414 ~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~ 493 (652)
++||||++||++||+||+++|+|+|+++||++++++++ ++|||++||||||+||.++.+++ .+.+
T Consensus 494 ~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~~---------~~~~--- 558 (622)
T PRK10745 494 NLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFHR---------CGLE--- 558 (622)
T ss_pred HhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHHH---------HHhC---
Confidence 99999999999999999999999999999999999996 69999999999999876542221 0000
Q ss_pred CCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCCCCCcccccccCc
Q 006286 494 FTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDT 573 (652)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~~~f~~~~~ 573 (652)
+ . +++
T Consensus 559 -----------------------g------------------~------------------------------~~~---- 563 (622)
T PRK10745 559 -----------------------G------------------L------------------------------SCR---- 563 (622)
T ss_pred -----------------------C------------------C------------------------------CCC----
Confidence 0 0 000
Q ss_pred cccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCc---hhHHHHHHHHHHHHHhhcCCCCcccccCCCCeEEeeeEE
Q 006286 574 KFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAP---FLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINY 650 (652)
Q Consensus 574 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss---~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY 650 (652)
-..++|.+||+.+...++++ |-|| .|.||.||++++...+++|++|++|+|+-+
T Consensus 564 ------------------~~~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v 620 (622)
T PRK10745 564 ------------------MMETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQV 620 (622)
T ss_pred ------------------ccceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEE
Confidence 01578999999999888877 6666 689999999999999999999999999998
Q ss_pred EC
Q 006286 651 YL 652 (652)
Q Consensus 651 ~v 652 (652)
|+
T Consensus 621 ~i 622 (622)
T PRK10745 621 EI 622 (622)
T ss_pred eC
Confidence 85
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.1e-165 Score=1361.15 Aligned_cols=459 Identities=42% Similarity=0.779 Sum_probs=452.1
Q ss_pred hhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhcccccch
Q 006286 5 PFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRV 84 (652)
Q Consensus 5 ~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kv 84 (652)
.+++..|++++.|+.++++|++|+||++|||+||||||||||||||++..|+++ ++|+||||+||++||++||+||+||
T Consensus 76 L~~~~~~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~i 154 (534)
T PF02705_consen 76 LIRRFLKSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKI 154 (534)
T ss_pred HHHHhhccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHH
Confidence 356778888888888899999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCcccee
Q 006286 85 AFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIK 164 (652)
Q Consensus 85 g~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~Ir 164 (652)
|++|||||++||++||++|+|||++ +|+||+|+||+|+++||.+||+.||.+||+|+||+||+||||||||||||+|||
T Consensus 155 g~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir 233 (534)
T PF02705_consen 155 GKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIR 233 (534)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhh
Confidence 9999999999999999999999999 599999999999999999999999999999999999999999999999999999
Q ss_pred eehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcc
Q 006286 165 LAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 244 (652)
Q Consensus 165 iaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 244 (652)
+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+
T Consensus 234 ~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 313 (534)
T PF02705_consen 234 IAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRL 313 (534)
T ss_pred hhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 006286 245 KVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFF 324 (652)
Q Consensus 245 ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F 324 (652)
||+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|++++++.+|||+.+++++++++|
T Consensus 314 ~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f 393 (534)
T PF02705_consen 314 KIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFF 393 (534)
T ss_pred EEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeCCC
Q 006286 325 GSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELA 404 (652)
Q Consensus 325 ~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~ 404 (652)
+.+|+.||+||+.|++||||+||++|++++++|++|+||++++++++++++++++++.++.++.++.|+||+|+|+|+..
T Consensus 394 l~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~ 473 (534)
T PF02705_consen 394 LVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSP 473 (534)
T ss_pred HHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecc
Q 006286 405 NGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKD 467 (652)
Q Consensus 405 ~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d 467 (652)
+++|+.+.|+++||+++||+++|+|++++|+|+||++|||+++++++ +++|||++||||||
T Consensus 474 ~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 474 DGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred ccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 99999999999999999999999999999999999999999999996 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-158 Score=1279.12 Aligned_cols=526 Identities=31% Similarity=0.594 Sum_probs=497.6
Q ss_pred cccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhcccccchhhhhhhHHH
Q 006286 14 KKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVI 93 (652)
Q Consensus 14 ~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~ 93 (652)
++...++.++|++|+|+++|||+||||||||||||||+++.|.++ ++|+|||++||++||++||+||++||++|||||+
T Consensus 101 ~~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvEGL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~ 179 (627)
T COG3158 101 PRRTALLIILGLIGAALFYGDAVITPAISVLSAVEGLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVML 179 (627)
T ss_pred CCCchhhhhHHHHhHHHHhcccccchhHHHHHHhccccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHH
Confidence 456779999999999999999999999999999999999999998 6999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccceeeehhhhhhh
Q 006286 94 LWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFP 173 (652)
Q Consensus 94 ~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~Iriaw~~~V~P 173 (652)
+||+++|..|++||++ ||+||+|+|||||++|+.++|..||+.||+||||+||+||||||||||||+|||.||+++|+|
T Consensus 180 lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P 258 (627)
T COG3158 180 LWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLP 258 (627)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcceEEecCCcc
Q 006286 174 CLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWV 253 (652)
Q Consensus 174 ~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~ 253 (652)
||+|||+||||++++||++..||||.++|+|++||++++||+||||||||+|||+||+++||++||++||+||.|||++.
T Consensus 259 ~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~ 338 (627)
T COG3158 259 CLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETE 338 (627)
T ss_pred HHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 006286 254 RGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLS 333 (652)
Q Consensus 254 ~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~s 333 (652)
.||||||.|||+|++++++++++||+|++||+|||+|||++|++||+|++.+++..|||+.+.+.++.++|+.+|..||+
T Consensus 339 ~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~ 418 (627)
T COG3158 339 SGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFA 418 (627)
T ss_pred cceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeCCCCCCchhhhh
Q 006286 334 SACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTH 413 (652)
Q Consensus 334 a~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h 413 (652)
||+.|++||||+|+++|++++++|.||++|+++.+++..++++|+|.+++.+++..+.||||+++|+|+..+-+|.++.|
T Consensus 419 AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlh 498 (627)
T COG3158 419 ANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLH 498 (627)
T ss_pred hhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHHHHHHHHHhhhcc
Q 006286 414 FLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG 493 (652)
Q Consensus 414 ~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~L~~FI~~e~~~ 493 (652)
++|||+++||++||+++++.|+|+|+++||++++++++ +++|++++|||||+|+.++ ..+....
T Consensus 499 nlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~------------~l~~~~~- 562 (627)
T COG3158 499 NLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPR------------ALRLCRK- 562 (627)
T ss_pred HhhhhheeeeeEEEEEEEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHH------------HHHHHhh-
Confidence 99999999999999999999999999999999999998 5999999999999998754 1111100
Q ss_pred CCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCCCCCcccccccCc
Q 006286 494 FTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDT 573 (652)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~~~f~~~~~ 573 (652)
++ .+|+.
T Consensus 563 ----------------------~G------------------------------------------------~~f~i--- 569 (627)
T COG3158 563 ----------------------KG------------------------------------------------LKFDI--- 569 (627)
T ss_pred ----------------------cC------------------------------------------------ceecc---
Confidence 00 00100
Q ss_pred cccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccCCCCeEEeeeEEE
Q 006286 574 KFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYY 651 (652)
Q Consensus 574 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~ 651 (652)
-...|.+|++.++++++|++-+-- +-.|..|.||.-++...++||.+|++|+|---|
T Consensus 570 -------------------m~tsFfl~re~l~~~~~~g~~~w~--~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 570 -------------------METSFFLSRESLIASKNSGMPRWR--DRLFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred -------------------cceEEEEEeeeeecCCCCCchHHH--HHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 024689999999999999886532 357899999999999999999999999995544
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=88.78 E-value=1.1 Score=50.61 Aligned_cols=87 Identities=15% Similarity=0.115 Sum_probs=43.7
Q ss_pred eehhHHHHHHHHHhhhcccccchhhh---hhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCcccee-e
Q 006286 62 VVFLACLVLIGHFVLQYRGTHRVAFM---FAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWT-S 137 (652)
Q Consensus 62 vv~is~~ILv~LF~~Q~~GT~kvg~~---F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~-~ 137 (652)
...+++++++++..+.-+|.+..+++ +.-+.++=++.+.+.|++.+.+-++. ..+|...+.-.. ++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGTE-TSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCCC-CcHHHHHHH
Confidence 35677888888999999997665543 33332222233444555544321111 112221110000 1223333 4
Q ss_pred ccceeeeecchhhhh
Q 006286 138 LAGLFLCTTGSEAMF 152 (652)
Q Consensus 138 LG~v~L~iTG~EAly 152 (652)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 566778888888643
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=81.91 E-value=14 Score=40.38 Aligned_cols=176 Identities=15% Similarity=0.133 Sum_probs=99.0
Q ss_pred eeehhHHHHHHHHHhhhcccccchhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCc---cceee
Q 006286 61 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGR---DGWTS 137 (652)
Q Consensus 61 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~---~g~~~ 137 (652)
....++.+++++++.++-+|....++...-..++=+..+..+++..+..++......+++... ++. .-...
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 206 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP------GGGSFGGILAA 206 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc------ccchHHHHHHH
Confidence 467889999999999999999988877666555555555555555555433332222221111 110 12335
Q ss_pred ccceeeeecchhhh--hc-cCCCCCccceeeehhhhhhhHHHHhccccchhhccccc-ccc-----Cccc---cccc-Cc
Q 006286 138 LAGLFLCTTGSEAM--FA-DLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFS-AAP-----LSFH---ASIP-DP 204 (652)
Q Consensus 138 LG~v~L~iTG~EAl--yA-DlGHF~~~~Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~-~~~-----npFy---~~iP-~~ 204 (652)
++.++.+.+|-|+. +| ++=+ .+|.|-.|-..-..-+.++-.+++.+....-|. +.. +|+. .... .+
T Consensus 207 ~~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~ 285 (466)
T COG0531 207 ILLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNW 285 (466)
T ss_pred HHHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccH
Confidence 56667888998864 33 2333 445565555443333333333333333333332 111 3443 2222 35
Q ss_pred chHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCc
Q 006286 205 LRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPR 243 (652)
Q Consensus 205 ~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr 243 (652)
..+-+.+++.++..-+..+.+.+.--+..+.-+-|++|+
T Consensus 286 ~~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 286 GAIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555566666666666666666676667777778899998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=80.92 E-value=22 Score=38.93 Aligned_cols=168 Identities=16% Similarity=0.107 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHhhhcccccchh---hhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccce-eecc
Q 006286 64 FLACLVLIGHFVLQYRGTHRVA---FMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGW-TSLA 139 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg---~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~-~~LG 139 (652)
.++++++++...+..+|.+..+ ..++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 4567778888888988965554 5666665554444444555432 22222222221 11221 1233
Q ss_pred ceeeeecchhhhhc--cCCCCCccceeeehhhhhhhHHHHhccccchhhccc-c-c---cccCccc----ccccCcchHH
Q 006286 140 GLFLCTTGSEAMFA--DLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKN-F-S---AAPLSFH----ASIPDPLRWP 208 (652)
Q Consensus 140 ~v~L~iTG~EAlyA--DlGHF~~~~Iriaw~~~V~P~L~L~Y~GQaA~l~~~-p-~---~~~npFy----~~iP~~~~~p 208 (652)
..+.+.+|-|+.-. +-=+-.+|.+..|-..-+.=+ .+.|+.-....... | + +.++|+. +...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45566778776543 333445566766654322211 22243332222111 1 1 1223432 2222333333
Q ss_pred HHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcc
Q 006286 209 VLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 244 (652)
Q Consensus 209 ~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 244 (652)
+.+.+.++..-+..+.+.+.=-+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 444444444444444444444444445578999973
No 12
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=78.45 E-value=42 Score=37.68 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=13.7
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 006286 343 GWVALMFTTVFLAIMYVWH 361 (652)
Q Consensus 343 GW~pl~ia~i~~~iM~~W~ 361 (652)
-|.+++++++++....-|.
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888776666565
No 13
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=77.88 E-value=49 Score=36.75 Aligned_cols=23 Identities=9% Similarity=0.037 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhhhcccccchhhh
Q 006286 65 LACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 65 is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
++++++.++..+.-+|++..+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 45566667888999999877765
No 14
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=77.72 E-value=17 Score=40.69 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=18.3
Q ss_pred ehhHHHHHHHHHhhhcccccchhhh
Q 006286 63 VFLACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 63 v~is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
..+.+++++++..+.-+|.+..+..
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 5567777888888899997655444
No 15
>PRK10655 potE putrescine transporter; Provisional
Probab=75.80 E-value=62 Score=35.76 Aligned_cols=43 Identities=19% Similarity=0.089 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHhhhcccccchhhh---hhhHHHHHHHHHHHhhhhh
Q 006286 64 FLACLVLIGHFVLQYRGTHRVAFM---FAPVVILWLLSTTGIGIYN 106 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg~~---F~PIm~~Wf~~i~~~Giyn 106 (652)
.++.++++.+..+.-+|++..+++ ..-..++-++.+...|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777888999997766654 2233333344444555443
No 16
>TIGR00930 2a30 K-Cl cotransporter.
Probab=73.18 E-value=29 Score=43.16 Aligned_cols=25 Identities=4% Similarity=0.123 Sum_probs=18.7
Q ss_pred eehhHHHHHHHHHhhhcccccchhh
Q 006286 62 VVFLACLVLIGHFVLQYRGTHRVAF 86 (652)
Q Consensus 62 vv~is~~ILv~LF~~Q~~GT~kvg~ 86 (652)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4457788888888898899865543
No 17
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=68.99 E-value=19 Score=39.18 Aligned_cols=252 Identities=14% Similarity=0.091 Sum_probs=132.4
Q ss_pred hcCccccchhhhhhhhccceec-cccCCcc--eeehhHHHHHHHHHhhhcccccchhhh---hhhHHH-HHHHHHHHhhh
Q 006286 32 FSIGVLTPAISVLSSIDGLQVQ-LQNRHTR--MVVFLACLVLIGHFVLQYRGTHRVAFM---FAPVVI-LWLLSTTGIGI 104 (652)
Q Consensus 32 igDGvlTPAiSVLSAveGl~v~-~p~~~~~--~vv~is~~ILv~LF~~Q~~GT~kvg~~---F~PIm~-~Wf~~i~~~Gi 104 (652)
.=+-+.+.+....++.+-+... .|++.++ ....++.++++..+.+.-+|....+++ .+=+.+ .-++.+.+.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~ 164 (426)
T PF13520_consen 85 WVAYILSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGI 164 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEE
Confidence 3344445555555566555443 2444321 245678888888999999998776654 333333 34455566666
Q ss_pred hhhcccCcce-----eeecChHHHHHHHhhcCccc-eeeccceeeeecchhhhhccCCCCCccceeeehhhhhhhHHHHh
Q 006286 105 YNVIKWNPRV-----YQALSPYYIYKFFKYTGRDG-WTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQ 178 (652)
Q Consensus 105 yni~~~~p~V-----l~A~nP~y~~~f~~~~~~~g-~~~LG~v~L~iTG~EAlyADlGHF~~~~Iriaw~~~V~P~L~L~ 178 (652)
+...+ +..- ....+|. +..+ +..++..+.+.+|-|+.=.-.+-.-+|.+..|=..-+.-+.++.
T Consensus 165 ~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y 234 (426)
T PF13520_consen 165 VSFSF-SGFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIY 234 (426)
T ss_dssp HSTTC-CHHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHH
T ss_pred eeecc-cccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHH
Confidence 65532 1110 0111111 1111 44566778888998876554444445566555433222232222
Q ss_pred ccccchhhccccc----cccC------cccccc-cCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcceEE
Q 006286 179 YMGQAAFLSKNFS----AAPL------SFHASI-PDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVV 247 (652)
Q Consensus 179 Y~GQaA~l~~~p~----~~~n------pFy~~i-P~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~ 247 (652)
-+..-++...-|. ..+| .+++.. .++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+. ..
T Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~~-~~ 313 (426)
T PF13520_consen 235 ILFSIALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPKW-FA 313 (426)
T ss_dssp HHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGG-GG
T ss_pred hhhhheeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhhh-hh
Confidence 2222333333221 1112 233332 4578888888888877777777776776777777888999942 22
Q ss_pred ecCCccCCcccchhhHHHHHHHhh-hee--EEe---cCchhHHHhhhhhhhhHHHHHH
Q 006286 248 HKARWVRGQVYIPEINWVLMILSL-AVT--VGF---RDTNRLANAYGSACMALTFVST 299 (652)
Q Consensus 248 hTS~~~~GQIYIP~vNw~Lmi~~l-~v~--~~F---~~s~~l~~AYGiaV~~~M~iTT 299 (652)
|++| +| .|..-.++...+. +.. ..| ++.+.+.+.+.+......+++.
T Consensus 314 ~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 314 KVNK--FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp TTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred hccc--cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2321 22 2554444333332 222 223 2345677777776666666653
No 18
>PRK15049 L-asparagine permease; Provisional
Probab=68.96 E-value=50 Score=37.68 Aligned_cols=23 Identities=17% Similarity=-0.016 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHhhhcccccchhh
Q 006286 64 FLACLVLIGHFVLQYRGTHRVAF 86 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg~ 86 (652)
.++.++++++..+.-+|....+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777888888888766654
No 19
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=66.99 E-value=1.2e+02 Score=35.33 Aligned_cols=45 Identities=27% Similarity=0.296 Sum_probs=27.2
Q ss_pred eehhHHHHHHHHHhhhcccccchhh---hhhhHHHHHHHHHHHhhhhh
Q 006286 62 VVFLACLVLIGHFVLQYRGTHRVAF---MFAPVVILWLLSTTGIGIYN 106 (652)
Q Consensus 62 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Giyn 106 (652)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456677777777888899766654 34444444444455556543
No 20
>PRK11021 putative transporter; Provisional
Probab=64.72 E-value=1.7e+02 Score=32.18 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=21.4
Q ss_pred eehhHHHHHHHHHhhhcccccchhhhh
Q 006286 62 VVFLACLVLIGHFVLQYRGTHRVAFMF 88 (652)
Q Consensus 62 vv~is~~ILv~LF~~Q~~GT~kvg~~F 88 (652)
...+++++++.+..+.-+|.+..+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356778888888999999988887654
No 21
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=62.17 E-value=1.3e+02 Score=33.68 Aligned_cols=44 Identities=7% Similarity=-0.201 Sum_probs=28.6
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcc
Q 006286 201 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 244 (652)
Q Consensus 201 iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 244 (652)
..++..+.+.+.+.++..-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555555555656666666666667777788999975
No 22
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=59.57 E-value=16 Score=39.71 Aligned_cols=89 Identities=26% Similarity=0.567 Sum_probs=54.5
Q ss_pred hHHHHHHHHHhhhcccccchhh--hhhhHHHHHHHHHHHhhhh---------------------hhcccCcceeeecChH
Q 006286 65 LACLVLIGHFVLQYRGTHRVAF--MFAPVVILWLLSTTGIGIY---------------------NVIKWNPRVYQALSPY 121 (652)
Q Consensus 65 is~~ILv~LF~~Q~~GT~kvg~--~F~PIm~~Wf~~i~~~Giy---------------------ni~~~~p~Vl~A~nP~ 121 (652)
.+|+.+.=.|+-| +|-.++|+ +.|-+.+.|.++-...++. -++||-|+..
T Consensus 212 mt~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~------ 284 (372)
T KOG3145|consen 212 MTVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAY------ 284 (372)
T ss_pred HHHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh------
Confidence 3444444444444 46667776 6666666665544433321 2344444322
Q ss_pred HHHHHHhhcCccceeeccceeeeecchhh-----------------hhccCCCCCcccee
Q 006286 122 YIYKFFKYTGRDGWTSLAGLFLCTTGSEA-----------------MFADLGQFTAGSIK 164 (652)
Q Consensus 122 y~~~f~~~~~~~g~~~LG~v~L~iTG~EA-----------------lyADlGHF~~~~Ir 164 (652)
.=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.=+.
T Consensus 285 ---mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vS 340 (372)
T KOG3145|consen 285 ---MNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVS 340 (372)
T ss_pred ---hcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHH
Confidence 22455667888 78999999999965 68999999865433
No 23
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=59.04 E-value=49 Score=37.20 Aligned_cols=25 Identities=28% Similarity=0.420 Sum_probs=17.7
Q ss_pred ehhHHHHHHHHHhhhcccccchhhh
Q 006286 63 VFLACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 63 v~is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
..++++++++++.+..+|+...+++
T Consensus 130 ~~~~~~~~~~~~~ln~~Gi~~~~~i 154 (473)
T TIGR00905 130 ILGASVLLWVFTFLVLRGVRQAAFI 154 (473)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456666677888999999776543
No 24
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=54.28 E-value=3.2e+02 Score=30.35 Aligned_cols=45 Identities=4% Similarity=0.032 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHhhhcccccchhhhhhh---HHHHHHHHHHHhhhhhhc
Q 006286 64 FLACLVLIGHFVLQYRGTHRVAFMFAP---VVILWLLSTTGIGIYNVI 108 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg~~F~P---Im~~Wf~~i~~~Giyni~ 108 (652)
.+++++++++..+.-+|++..+.+--. +.++-++.+.++|+..+.
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~ 175 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIF 175 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666667777888898777654432 233333334445554433
No 25
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=53.85 E-value=1.2e+02 Score=32.30 Aligned_cols=54 Identities=19% Similarity=0.363 Sum_probs=38.9
Q ss_pred hHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHHhh
Q 006286 282 RLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFG----SIEIIYLSSA 335 (652)
Q Consensus 282 ~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~----~ie~~f~sa~ 335 (652)
+-=..||.+|..+.++.++-+++.+..+.+.+++.++++.++++ .+|-..+|+.
T Consensus 13 ~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~ 70 (301)
T PF14362_consen 13 NKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSI 70 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33457899999999999998888888888887666655554444 4565555543
No 26
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=52.41 E-value=2.1e+02 Score=32.82 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=23.9
Q ss_pred ceeeeecchhhh--hccCCCCCccceeeehhhhhhhHHHHhccccchh
Q 006286 140 GLFLCTTGSEAM--FADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAF 185 (652)
Q Consensus 140 ~v~L~iTG~EAl--yADlGHF~~~~Iriaw~~~V~P~L~L~Y~GQaA~ 185 (652)
+++.+.+|-|+. .|+==+--+|.+-.|=...+.-+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888865 4554455566655554443333344444443333
No 27
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=50.23 E-value=93 Score=34.41 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHhhhcccccchhhh
Q 006286 64 FLACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
.+++++++.+..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 456666777788888898777764
No 28
>PRK10238 aromatic amino acid transporter; Provisional
Probab=47.11 E-value=1.2e+02 Score=34.14 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=52.9
Q ss_pred hHHHHHHHHHhhhcccccchhh---hhhhHHHHHHHHHHHhhhhhhccc--Ccc-eeeecChHHHHHHHhhcCccce-ee
Q 006286 65 LACLVLIGHFVLQYRGTHRVAF---MFAPVVILWLLSTTGIGIYNVIKW--NPR-VYQALSPYYIYKFFKYTGRDGW-TS 137 (652)
Q Consensus 65 is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Giyni~~~--~p~-Vl~A~nP~y~~~f~~~~~~~g~-~~ 137 (652)
.+++++++++.+.-+|+...+. .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888888876654 333333333333333344332221 121 11110000 00011222222 23
Q ss_pred ccceeeeecchhh--hhccCCCCCccceeeehhhhhhhHHHHhccc
Q 006286 138 LAGLFLCTTGSEA--MFADLGQFTAGSIKLAFCCIVFPCLVLQYMG 181 (652)
Q Consensus 138 LG~v~L~iTG~EA--lyADlGHF~~~~Iriaw~~~V~P~L~L~Y~G 181 (652)
++.++.+.+|-|+ ..|+=-+=.+|++-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4556778889887 4455456667777776543 23344455554
No 29
>PRK10746 putative transport protein YifK; Provisional
Probab=46.71 E-value=2.2e+02 Score=32.04 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=17.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHH
Q 006286 343 GWVALMFTTVFLAIMYVWHYGSRKR 367 (652)
Q Consensus 343 GW~pl~ia~i~~~iM~~W~~G~~~~ 367 (652)
.......+.+++.+++.++...+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567778888888777777665443
No 30
>PRK10249 phenylalanine transporter; Provisional
Probab=45.92 E-value=1.7e+02 Score=32.77 Aligned_cols=102 Identities=21% Similarity=0.200 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhhhcccccchhh---hhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHH--HhhcCccc-eeec
Q 006286 65 LACLVLIGHFVLQYRGTHRVAF---MFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKF--FKYTGRDG-WTSL 138 (652)
Q Consensus 65 is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f--~~~~~~~g-~~~L 138 (652)
++.++++++..+.-+|.+..|. .+.=+.++..+.+.++|++-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 4566677777888888876654 3333344455555556665443322210 1111111000 00123333 2445
Q ss_pred cceeeeecchhhh--hccCCCCCccceeeehh
Q 006286 139 AGLFLCTTGSEAM--FADLGQFTAGSIKLAFC 168 (652)
Q Consensus 139 G~v~L~iTG~EAl--yADlGHF~~~~Iriaw~ 168 (652)
..++.+.+|-|+. .|+=-+-.+|+|-.|=.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 5567788898865 56555666676655543
No 31
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=43.76 E-value=2.7e+02 Score=30.92 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=26.9
Q ss_pred ehhHHHHHHHHHhhhccccc---chhhhhhhHHHHHHHHHHHhhhhhh
Q 006286 63 VFLACLVLIGHFVLQYRGTH---RVAFMFAPVVILWLLSTTGIGIYNV 107 (652)
Q Consensus 63 v~is~~ILv~LF~~Q~~GT~---kvg~~F~PIm~~Wf~~i~~~Giyni 107 (652)
..+++++++.+..+.-+|.+ |+...+.=+.++=++.+.++|++..
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35666777777788999875 4444444334444445555666543
No 32
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=40.55 E-value=26 Score=36.57 Aligned_cols=30 Identities=17% Similarity=0.586 Sum_probs=25.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHhHHHH
Q 006286 338 KIPNGGWVALMFTTVFLAIMYVWHYGSRKR 367 (652)
Q Consensus 338 Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~ 367 (652)
|=.+|||..++++.+...+..+|++--+.+
T Consensus 257 ~~i~~G~isiv~Gliiv~iLii~N~kvEv~ 286 (304)
T COG4059 257 VSIQGGWISIVAGLIIVLILIIWNRKVEVK 286 (304)
T ss_pred cccccchhhhHHHHHHHHHHHHhcchhhhh
Confidence 334899999999999999999999865554
No 33
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=39.77 E-value=5.1e+02 Score=28.94 Aligned_cols=22 Identities=9% Similarity=0.232 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhHH
Q 006286 344 WVALMFTTVFLAIMYVWHYGSR 365 (652)
Q Consensus 344 W~pl~ia~i~~~iM~~W~~G~~ 365 (652)
-++..++..++..++.+++-.+
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~ 464 (478)
T TIGR00913 443 FFEAYLSLPIFIALYIGHKVYK 464 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3456666777777777766654
No 34
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=39.61 E-value=1.3e+02 Score=30.50 Aligned_cols=21 Identities=14% Similarity=0.406 Sum_probs=16.8
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 006286 342 GGWVALMFTTVFLAIMYVWHY 362 (652)
Q Consensus 342 GGW~pl~ia~i~~~iM~~W~~ 362 (652)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999998888766653
No 35
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=38.54 E-value=26 Score=39.79 Aligned_cols=90 Identities=21% Similarity=0.309 Sum_probs=59.0
Q ss_pred HcCCCCcceEEecCCccCC----cccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHH-----
Q 006286 237 ALGCFPRVKVVHKARWVRG----QVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIY----- 307 (652)
Q Consensus 237 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~----- 307 (652)
+-|-.||+-+...=++..| |+|+|.+= ++ .+-=|-.-=|-++-.+=-.+++|+|..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L---iV-ilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL---IV-ILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh---hh-HHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 4789999999998888888 99999851 11 11111222355556666889999999999998765221
Q ss_pred HHhhhhHHHHHHHHHHHHH-HHHH
Q 006286 308 FVWNQSLFLALLYVLFFGS-IEII 330 (652)
Q Consensus 308 ~vw~~~~~~~~~~~~~F~~-ie~~ 330 (652)
+|.-.-+.+..+|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 2233345555677777766 4543
No 36
>PRK11387 S-methylmethionine transporter; Provisional
Probab=38.28 E-value=2.3e+02 Score=31.80 Aligned_cols=21 Identities=24% Similarity=-0.023 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhhcccccchhh
Q 006286 66 ACLVLIGHFVLQYRGTHRVAF 86 (652)
Q Consensus 66 s~~ILv~LF~~Q~~GT~kvg~ 86 (652)
.+++++.+..+.-+|.+..+.
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344455667778888776553
No 37
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=37.12 E-value=1.7e+02 Score=32.51 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=16.9
Q ss_pred hhHHHHHHHHHhhhcccccchhhh
Q 006286 64 FLACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 64 ~is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
.+..++++++..+.-+|++..+++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHH
Confidence 345666667788899998766653
No 38
>PRK10580 proY putative proline-specific permease; Provisional
Probab=34.09 E-value=3.2e+02 Score=30.48 Aligned_cols=24 Identities=8% Similarity=0.170 Sum_probs=18.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHH
Q 006286 342 GGWVALMFTTVFLAIMYVWHYGSR 365 (652)
Q Consensus 342 GGW~pl~ia~i~~~iM~~W~~G~~ 365 (652)
+.++.+.++.+.+.+.+.++.-.+
T Consensus 424 ~~~~~~~~~~~~~~~~~~~y~~~~ 447 (457)
T PRK10580 424 DTRISLYVGFAWIVLLLIGWMFKR 447 (457)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567788888888888888876543
No 39
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=31.99 E-value=7.8e+02 Score=27.68 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=18.6
Q ss_pred eehhHHHHHHHHHhhhcccccchhhh
Q 006286 62 VVFLACLVLIGHFVLQYRGTHRVAFM 87 (652)
Q Consensus 62 vv~is~~ILv~LF~~Q~~GT~kvg~~ 87 (652)
...++.++++++..+.-+|++..+++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 35566677777888888998766553
No 40
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=31.62 E-value=40 Score=37.74 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=21.3
Q ss_pred eeeccceeeeecchh--hhhccCCCCCccceeeehhh
Q 006286 135 WTSLAGLFLCTTGSE--AMFADLGQFTAGSIKLAFCC 169 (652)
Q Consensus 135 ~~~LG~v~L~iTG~E--AlyADlGHF~~~~Iriaw~~ 169 (652)
|..+.-.+.+.+|-| +.+|+==.=-+|+|..|-..
T Consensus 203 ~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 203 FAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 556666778888988 34555445555566554433
No 41
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=29.63 E-value=24 Score=37.99 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=24.2
Q ss_pred CCCCCccceeeehhhhhhhHHHHhccccch-----hhcccccccc
Q 006286 155 LGQFTAGSIKLAFCCIVFPCLVLQYMGQAA-----FLSKNFSAAP 194 (652)
Q Consensus 155 lGHF~~~~Iriaw~~~V~P~L~L~Y~GQaA-----~l~~~p~~~~ 194 (652)
=+++||.+|||+|-. ..||+. =|++|||-+.
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVA 207 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhc
Confidence 469999999999998 445543 4788998666
No 42
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=24.58 E-value=7.6e+02 Score=27.76 Aligned_cols=106 Identities=13% Similarity=0.042 Sum_probs=47.1
Q ss_pred ccceeeeecchhhh--hccCCCCCccceeeehhhhhhhHHHHhccccchhhc--cccc---cccCcccccc----cCcch
Q 006286 138 LAGLFLCTTGSEAM--FADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLS--KNFS---AAPLSFHASI----PDPLR 206 (652)
Q Consensus 138 LG~v~L~iTG~EAl--yADlGHF~~~~Iriaw~~~V~P~L~L~Y~GQaA~l~--~~p~---~~~npFy~~i----P~~~~ 206 (652)
+..++.+.+|-|+. .|.==+-.+|++..|-.. ..-...+.|.-....+. ..++ +.++||-... -++..
T Consensus 217 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 295 (469)
T PRK11049 217 FQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAA 295 (469)
T ss_pred HHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHH
Confidence 33456677788754 333335556666665532 22233333443332222 1222 2235543221 11222
Q ss_pred HHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCCcc
Q 006286 207 WPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 244 (652)
Q Consensus 207 ~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 244 (652)
.-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 296 ~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 296 SVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 22223333333333444444444445555578999964
No 43
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=24.05 E-value=2.2e+02 Score=29.15 Aligned_cols=47 Identities=17% Similarity=0.190 Sum_probs=32.3
Q ss_pred HHHHHHHhhheeEEecCchhHHHhh--hhhhhhHHHHHHHHHHHHHHHH
Q 006286 263 NWVLMILSLAVTVGFRDTNRLANAY--GSACMALTFVSTLLTSLVIYFV 309 (652)
Q Consensus 263 Nw~Lmi~~l~v~~~F~~s~~l~~AY--GiaV~~~M~iTT~L~~~v~~~v 309 (652)
|-..+.-.+.++-..--|+++.||. |+||+.||.+++.+..++=.++
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444445555556677777776 6788999999999988876555
No 44
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=23.19 E-value=27 Score=37.74 Aligned_cols=60 Identities=13% Similarity=0.450 Sum_probs=0.0
Q ss_pred HHHHhh--hhHHHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHH---HHHHHHHHHHHhHHHHH
Q 006286 306 IYFVWN--QSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTT---VFLAIMYVWHYGSRKRY 368 (652)
Q Consensus 306 ~~~vw~--~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~---i~~~iM~~W~~G~~~~~ 368 (652)
|.+.|+ -++|..++|++.|+.-=.+...|.+. |=.||++++-. ++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 444455 47788888888777655555566554 67899998754 56777789988776653
No 45
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=22.72 E-value=96 Score=31.53 Aligned_cols=60 Identities=23% Similarity=0.182 Sum_probs=39.1
Q ss_pred ehhhhhhhHHHHhccccchhh-ccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHH
Q 006286 166 AFCCIVFPCLVLQYMGQAAFL-SKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCY 236 (652)
Q Consensus 166 aw~~~V~P~L~L~Y~GQaA~l-~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~ 236 (652)
|=+.+=+|||+.+|+ +.+ +.||.+..| ..+-.--++.|+..=++-||+ +|-+|+++..-+
T Consensus 89 As~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 89 ASLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 344556899999997 333 568877666 344445555566556667888 777777666544
No 46
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.45 E-value=76 Score=24.95 Aligned_cols=29 Identities=21% Similarity=0.590 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHhHHHHHhhhhcCCCChH
Q 006286 351 TVFLAIMYVWHYGSRKRYLYDLHNKVPMK 379 (652)
Q Consensus 351 ~i~~~iM~~W~~G~~~~~~~~~~~~~~~~ 379 (652)
.+++.....|.|-+++|.++|...+++++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 33344445566655555555655566554
No 47
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=21.84 E-value=1e+02 Score=28.36 Aligned_cols=27 Identities=26% Similarity=0.413 Sum_probs=21.6
Q ss_pred EEEEEecCCCCcEEEEEEEeeecccCC
Q 006286 444 YLIGRIGPKSYRMYRCIVRNGYKDVPN 470 (652)
Q Consensus 444 ~~v~~l~~~~~~~yR~vvryGY~d~~~ 470 (652)
..+..+...|.+.|+|.+.+|.-|+.+
T Consensus 76 L~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 76 LEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred EEEeecccccCEEEEEEEecCCCCcee
Confidence 456667777889999999999887654
No 48
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=21.56 E-value=3e+02 Score=28.37 Aligned_cols=47 Identities=11% Similarity=0.252 Sum_probs=31.6
Q ss_pred HHHHHHHhhheeEEecCchhHHHhh--hhhhhhHHHHHHHHHHHHHHHH
Q 006286 263 NWVLMILSLAVTVGFRDTNRLANAY--GSACMALTFVSTLLTSLVIYFV 309 (652)
Q Consensus 263 Nw~Lmi~~l~v~~~F~~s~~l~~AY--GiaV~~~M~iTT~L~~~v~~~v 309 (652)
|-..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++=.++
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444555555666777766 6788999999999988876554
No 49
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.52 E-value=3.8e+02 Score=30.92 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=14.2
Q ss_pred HHhhhhhhhhHHHHHHHHHH
Q 006286 284 ANAYGSACMALTFVSTLLTS 303 (652)
Q Consensus 284 ~~AYGiaV~~~M~iTT~L~~ 303 (652)
-..||+++..-+++...+..
T Consensus 23 I~~YGl~ialGil~a~~l~~ 42 (460)
T PRK13108 23 VRAYAVCVITGIIVALLIGD 42 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 36799988888887655443
No 50
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=21.26 E-value=54 Score=28.70 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=11.0
Q ss_pred HHHHHHhhcCCCCcc
Q 006286 621 AYSFLRKNSRSPAVF 635 (652)
Q Consensus 621 ~Y~FLRkNcR~~~~~ 635 (652)
-|.|||+|||.+.-.
T Consensus 25 ~~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 25 PYEWLRDNCPCAECR 39 (89)
T ss_dssp EHHHHHHT-SSSSTC
T ss_pred CHHHHhccCCChhhc
Confidence 378999999987644
No 51
>PF02508 Rnf-Nqr: Rnf-Nqr subunit, membrane protein; InterPro: IPR003667 The rnf genes of Rhodobacter capsulatus, essential for nitrogen fixation, are thought to encode a system for electron transport to nitrogenase. The rnfABCDGEH operon comprises seven genes that show similarities in gene arrangement and deduced protein sequences to homologous regions in the genomes of Haemophilus influenzae and Escherichia coli. Four of the rnf gene products were found to be similar in sequence to components of an Na+-dependent NADH:ubiquinone oxidoreductase (NQR) from Vibrio alginolyticus []. The NQR-type enzyme of Klebsiella pneumoniae was shown to catalyse sodium-dependent NADH oxidation in the respiratory chain [].; GO: 0016020 membrane
Probab=20.17 E-value=4e+02 Score=27.06 Aligned_cols=47 Identities=26% Similarity=0.272 Sum_probs=31.4
Q ss_pred HHHHHHHhhheeEEecCchhHHHh--hhhhhhhHHHHHHHHHHHHHHHH
Q 006286 263 NWVLMILSLAVTVGFRDTNRLANA--YGSACMALTFVSTLLTSLVIYFV 309 (652)
Q Consensus 263 Nw~Lmi~~l~v~~~F~~s~~l~~A--YGiaV~~~M~iTT~L~~~v~~~v 309 (652)
|-..+.-.+.+.-...-|+++.|| -|+|++.+|++++.+..++=.++
T Consensus 15 ~N~vl~~~LGlcp~l~vs~~~~~a~~mGlav~~V~~~s~~~~~~l~~~i 63 (190)
T PF02508_consen 15 NNPVLVQFLGLCPFLAVSTSLENALGMGLAVTFVLTLSSVLISLLRNFI 63 (190)
T ss_pred hHHHHHHHHHhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555555556666665 46788899999999998886665
Done!