BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006303
(651 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439759|ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Vitis vinifera]
gi|297741486|emb|CBI32618.3| unnamed protein product [Vitis vinifera]
Length = 842
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/614 (63%), Positives = 475/614 (77%), Gaps = 14/614 (2%)
Query: 40 LASSSSLSSIPTVHS--SQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESV 97
L +S+S P + S S+ LLS VR DL++ Y+D+A+KL +DGR ++F+ + E++
Sbjct: 36 LLTSTSARLSPPISSLRSRHPLLSDVRWDLNN----YSDLATKLVQDGRFDDFSTMAETL 91
Query: 98 VVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKL 157
++S +S+ +E+V++GI +REGR+ CVV VL+K+++LG+ PLELFDGS +L
Sbjct: 92 ILSGVELSQL-----VELVSAGISGLLREGRVYCVVEVLRKVDKLGICPLELFDGSTLEL 146
Query: 158 LKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV 217
L EC+R+L+ G+VE V L+E+L+ F PVK+L E +++CVNK + NLA+RYACI+
Sbjct: 147 LSKECRRILNCGQVEEVVELIEILDGFHFPVKKLLEPLDFIKICVNKRNPNLAVRYACIL 206
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A ILFC + EFGKKRDL SAL A++ASK+ L PNMY RT+IDVCG+C Y KSR
Sbjct: 207 PHAQILFCTIIHEFGKKRDLGSALTAFEASKQKLIGPNMYCYRTMIDVCGLCSHYQKSRY 266
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
IYE+L +Q +T NIYVFNSLMNVN HDL +T VYKNMQ LGV ADMASYNILLKACC+A
Sbjct: 267 IYEELLAQKITPNIYVFNSLMNVNVHDLSYTFNVYKNMQNLGVTADMASYNILLKACCVA 326
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G LAQEIY EV++LE+ G+LKLDVFTYSTI+KVFADAK WQMALK+KEDMLSAGV PN
Sbjct: 327 GRVDLAQEIYREVQNLESNGMLKLDVFTYSTIIKVFADAKLWQMALKIKEDMLSAGVIPN 386
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+TWS+LI++CANAG+ EQA+ LF+EML AGCEPNSQC NILL ACVEACQ+DRAFRLF+
Sbjct: 387 TVTWSALISSCANAGITEQAIQLFKEMLLAGCEPNSQCYNILLHACVEACQYDRAFRLFQ 446
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SW S+ Q +E K + IT+ PN + NSH+ SF K F F PTTTT
Sbjct: 447 SWKDSRFQEI---SGGTGNGNTVGVELKHQNCITSMPNCLSNSHHLSFSKSFPFTPTTTT 503
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YNILMKAC TDYYR KALM+EM+T GLSPNHISW+ILID CGG+GN+ GA++ILK MRE
Sbjct: 504 YNILMKACGTDYYRAKALMDEMKTAGLSPNHISWSILIDICGGTGNIVGAVRILKTMREA 563
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDVVAYTTAIK CV SK LK AFSLF EMK YQIQPNLVTY TLLRARSRYGSLHEV
Sbjct: 564 GIKPDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVTYNTLLRARSRYGSLHEV 623
Query: 638 QQCLAVYQDMWKAG 651
QQCLA+YQ M KAG
Sbjct: 624 QQCLAIYQHMRKAG 637
>gi|224068636|ref|XP_002326162.1| predicted protein [Populus trichocarpa]
gi|222833355|gb|EEE71832.1| predicted protein [Populus trichocarpa]
Length = 828
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/608 (62%), Positives = 454/608 (74%), Gaps = 9/608 (1%)
Query: 49 IPTVHSSQTALLSTV----RRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNV 104
IP VHS LLST+ + SS DY+A++ASKLA+DGRL++F MI ESV+ S
Sbjct: 45 IPAVHSRSPPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEP 104
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
S F + LS+ VA GI K++++G +DCVV LKK ELGV+ L+ DG LLK E R
Sbjct: 105 SSFVAALSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKEFIR 164
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP-RADIL 223
+++ G+VE V +ME L F KEL + I+++CV+K + +A+RYA I P IL
Sbjct: 165 IVNCGDVEQVVYIMETLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRIL 224
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN + EFG+K L SAL AYD +K LS PNMY+ RTIIDVCG+CGDYMKSR IYEDL
Sbjct: 225 FCNIISEFGRKGHLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLI 284
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ V N+YVFNSLMNVNAHDL +T V+KNMQ LGV AD+ASYNILLKACC+AG LA
Sbjct: 285 NRKVIPNVYVFNSLMNVNAHDLGYTFSVFKNMQNLGVTADVASYNILLKACCIAGRVDLA 344
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++IY EVK LE+ VLKLDVFTY IVK+FADAK WQMALK+KEDMLS+GVTPN WSS
Sbjct: 345 KDIYREVKQLESAEVLKLDVFTYCMIVKIFADAKMWQMALKIKEDMLSSGVTPNMHIWSS 404
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ACANAGLVEQA+ LFEEML +GC+PNSQCCNILL ACV+ACQ+DRAFRLF+ W S+
Sbjct: 405 LISACANAGLVEQAIQLFEEMLLSGCKPNSQCCNILLHACVQACQYDRAFRLFQCWKGSE 464
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q D+ GN D I EH K N VPNSH+ +F K+F F PT TY++LMK
Sbjct: 465 AQEVFHGDHSGNADEI---EHAQKHC-PNMTTIVPNSHHLNFIKKFPFTPTPATYHMLMK 520
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
AC +DY+R KALM+EM+TVG+SPNHISW+ILID CG SGNV GA+QILK MR G+ PDV
Sbjct: 521 ACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRMAGVEPDV 580
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
VAYTTAIKVCV +K LK AFSLF EMK QI PNLVTY TLLRAR+RYGSL EVQQCLA+
Sbjct: 581 VAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLREVQQCLAI 640
Query: 644 YQDMWKAG 651
YQDM KAG
Sbjct: 641 YQDMRKAG 648
>gi|449448705|ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/663 (59%), Positives = 485/663 (73%), Gaps = 21/663 (3%)
Query: 1 MRV--VFGSSSSSSSAIVATQTRLYNHRN-KPNKHPVTKLFPLASSSSLSSIPTVHSSQT 57
MRV + GSSS+S + R Y H + K K ++ L P + SS + S
Sbjct: 1 MRVFLILGSSSASIAG-----PRRYRHSHCKAPKSSLSNLSPTGTHLPFSSHTSTRHSPP 55
Query: 58 ALLSTVRRDLSSRN-------DYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASM 110
ALLS+V D++ + +YA +ASKLA+ G+LE+FAM+VESVVV+ S+F +M
Sbjct: 56 ALLSSVELDIAGASSGGRIPIQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAM 115
Query: 111 LSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGE 170
L++E+VA GI + +REG++ VV VL+K+ ELG++ LEL D + L+ +C+R+ SGE
Sbjct: 116 LAVELVAKGISRCLREGKVWSVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAKSGE 175
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
+E V LMEVL F V+E+ + +++LCV+ + +AIRYA I+P ADILFC + E
Sbjct: 176 LEELVELMEVLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINE 235
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGKKRDL SA AY SK +++ NMYI RTIIDVCG+CGDY KSR IY+DL +QNV N
Sbjct: 236 FGKKRDLKSAYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVIPN 295
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+VFNSLMNVNAHDL +T ++YKNMQ LGV ADMASYNILLKACCLAG LAQ+IY EV
Sbjct: 296 IFVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV 355
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
KHLE GVLKLDVFTYSTIVKVFADAK W+MAL+VKEDM SAGV+PN +TWSSLI++CAN
Sbjct: 356 KHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCAN 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+GLVE A+ LFEEM+ AGCEPN+QCCN LL ACVE QFDRAFRLFRSW + ++ G
Sbjct: 416 SGLVELAIQLFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAFRLFRSW--KEKELWDGI 473
Query: 471 DYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
+ +TD +N++ + NT PN + H SF F+FKPT TTYNILMKAC TD
Sbjct: 474 ERKSSTD--NNLDADSTSQLCNTKMPNAPSHVHQISFVGNFAFKPTITTYNILMKACGTD 531
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
YY KALM EM++VGL+PNHISW+IL+D CG S +VE A+QIL MR G+ PDVVAYTT
Sbjct: 532 YYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRMAGVDPDVVAYTT 591
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
AIKVCV K K AFSLFEEMK ++IQPNLVTY TLLRARS YGSLHEVQQCLA+YQDM
Sbjct: 592 AIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMR 651
Query: 649 KAG 651
K+G
Sbjct: 652 KSG 654
>gi|30679784|ref|NP_195903.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332278227|sp|Q8GYL7.3|PP361_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g02830, chloroplastic; Flags: Precursor
gi|332003140|gb|AED90523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 852
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/662 (55%), Positives = 471/662 (71%), Gaps = 18/662 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNS-SFTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AG 651
AG
Sbjct: 661 AG 662
>gi|39104565|dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
Length = 852
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/662 (55%), Positives = 471/662 (71%), Gaps = 18/662 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNS-SFTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AG 651
AG
Sbjct: 661 AG 662
>gi|449521499|ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02830, chloroplastic-like [Cucumis sativus]
Length = 855
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/667 (58%), Positives = 481/667 (72%), Gaps = 23/667 (3%)
Query: 1 MRV--VFGSSSSSSSAIVATQTRLYNHRN-KPNKHPVTKLFPLASSSSLSSIPTVHSSQT 57
MRV + GSSS+S + R Y H + K K ++ L P + SS + S
Sbjct: 1 MRVFLILGSSSASIAG-----PRRYRHSHCKAPKSSLSNLSPTGTHLPFSSHTSTRHSPP 55
Query: 58 ALLSTVRRDLSSRN-------DYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASM 110
ALLS+V D++ + +YA +ASKLA+ G+LE+FAM+VESVVV+ S+F +M
Sbjct: 56 ALLSSVELDIAGASSGGRIPIQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAM 115
Query: 111 LSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGE 170
L++E+VA GI + +REG++ VV VL+K+ ELG++ LEL D + L+ +C+R+ SGE
Sbjct: 116 LAVELVAKGISRCLREGKVWSVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAKSGE 175
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
+E V LMEVL F V+E+ + +++LCV+ + +AIRYA I+P ADILFC + E
Sbjct: 176 LEELVELMEVLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINE 235
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGKKRDL SA AY SK +++ NMYI RTIIDVCG+CGDY KSR IY+DL +QNVT N
Sbjct: 236 FGKKRDLKSAYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVTPN 295
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+VFNSLMNVNAHDL +T ++YKNMQ LGV ADMASYNILLKACCLAG LAQ+IY EV
Sbjct: 296 IFVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV 355
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
KHLE GVLKLDVFTYSTIVKVFADAK W+MAL+VKEDM SAGV+PN +TWSSLI++CAN
Sbjct: 356 KHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCAN 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+GLVE A+ LFEEM+ AGCEPN+QCCN LL ACVE QFDRAFRLFRSW + ++ G
Sbjct: 416 SGLVELAIQLFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAFRLFRSW--KEKELWDGI 473
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ +TD + + + T PN + H SF +FKPT TTYNILMKAC TDYY
Sbjct: 474 ERKSSTDNNLDADSTSQLCTTKMPNAPSHVHQISFVGNLAFKPTITTYNILMKACGTDYY 533
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KALM EM++VGL+PNHISW+IL+D CG S +VE A+QIL MR G+ PDVVAYTTAI
Sbjct: 534 HAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRMAGVDPDVVAYTTAI 593
Query: 591 KVCVRSKRL------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
KV + L K AFSLFEEMK ++IQPNLVTY TLLRARS YGSLHEVQQCLA+Y
Sbjct: 594 KVSIPLAVLVLKXNWKLAFSLFEEMKGFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIY 653
Query: 645 QDMWKAG 651
QDM K+G
Sbjct: 654 QDMRKSG 660
>gi|255568444|ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535493|gb|EEF37162.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 786
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/544 (61%), Positives = 409/544 (75%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
+S L + +A GI K++RE +D VV L ++LG+ P +LFD + LLK EC R+++
Sbjct: 41 SSGLHMIALAKGISKNLRERNVDSVVDALNTADQLGLPPSQLFDAASMDLLKTECLRIVN 100
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
G +E + LME L + +KEL E R+++LCV++ + +LA+RYA + P IL C+
Sbjct: 101 FGRLEDIILLMETLAGYSFSIKELVEPSRVIKLCVHQRNPHLAVRYARLFPHEGILMCSI 160
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V++FGKK DL SAL AY+A +H + P+MY+ R +IDVCG+CGDYM+SR I+ED+ SQ V
Sbjct: 161 VKQFGKKGDLDSALAAYEAYMQHSTVPDMYLYRALIDVCGLCGDYMQSRYIFEDIVSQKV 220
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI+VFNSLMNVNAHDL +TL VYK MQ LGV ADM SYNILLK+C LAG LAQ+IY
Sbjct: 221 IPNIFVFNSLMNVNAHDLGYTLHVYKKMQNLGVTADMTSYNILLKSCSLAGKVDLAQDIY 280
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E K LE G+LKLD FTY TI+K+FADAK WQ+ALK+KEDMLS+GVTPNT TWSSLI+A
Sbjct: 281 REAKQLELAGLLKLDDFTYCTIIKIFADAKLWQLALKIKEDMLSSGVTPNTFTWSSLISA 340
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
ANAGLV+QA+ LFEEML AGC PNS CCNILL ACVEACQ+DRAFRLF +W S+ Q
Sbjct: 341 SANAGLVDQAIKLFEEMLLAGCVPNSHCCNILLHACVEACQYDRAFRLFNAWKGSEIQNT 400
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DY+ D IS+ H + I PN NS + SF K+F F P++ TYN LMKAC +
Sbjct: 401 FTTDYNCPVDDISSAMHACEDYIITVPNLASNSLHLSFLKKFPFTPSSATYNTLMKACGS 460
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY R KALM+EM+ VGLSPNHISW+ILID CG SGN+EGA+QILK MR G+ PDV+AYT
Sbjct: 461 DYNRAKALMDEMQAVGLSPNHISWSILIDICGSSGNMEGAIQILKNMRMAGIEPDVIAYT 520
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
TAIKV V SK LK AFSLF EMK YQ++PNLVTY TLLRAR+RYGSL EVQQCLA+YQDM
Sbjct: 521 TAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVTYDTLLRARTRYGSLKEVQQCLAIYQDM 580
Query: 648 WKAG 651
KAG
Sbjct: 581 RKAG 584
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 294 FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+N+LM D + MQ +G+ + S++IL+ C +GN A +I +K++
Sbjct: 451 YNTLMKACGSDYNRAKALMDEMQAVGLSPNHISWSILIDICGSSGNMEGAIQI---LKNM 507
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
G+ + DV Y+T +KV ++K +MA + +M + PN +T+ +L+ A G
Sbjct: 508 RMAGI-EPDVIAYTTAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVTYDTLLRARTRYGS 566
Query: 414 ---VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
V+Q + ++++M +AG + N N L Q E C+
Sbjct: 567 LKEVQQCLAIYQDMRKAGYKSND---NYLKQLIEEWCE 601
>gi|356572391|ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 811
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/651 (54%), Positives = 445/651 (68%), Gaps = 41/651 (6%)
Query: 3 VVFGSSSSSSSAIVATQTRLYNHRNKPNKHP-VTKLFPLASSSSLSSIPTVHSSQTALLS 61
V+ GSS + + +T + H KP P + KL P +S+ ++S AL
Sbjct: 5 VILGSSVVTPFSSSSTPHHQHRHPIKPPHKPSLPKLAPFSSNWNIS---------CAL-- 53
Query: 62 TVRRDLSSRNDYYADMASKLAKDGRL-EEFAMIVESVVVSEGNVSKFASMLSLEMVASGI 120
A +A D +L +EF ++ E + S ++ E++A +
Sbjct: 54 ------------QAPLALSHCADSKLVQEFEVVFEDFIDS--------GVVDAELLAKVV 93
Query: 121 VKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEV 180
+ IR ++ V+ L K+ ++ +GS ++ EC RL+ VE V LMEV
Sbjct: 94 LLGIRGKKVRSVIHALNKVQGRRISLSTHLNGS--DIIAKECCRLVTCSHVEEAVELMEV 151
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
L F++ ++EL + I++ CV + LA+RYAC++P A ILFCN + EFGK+RDLVSA
Sbjct: 152 LARFQISIRELVQPSDIIKRCVLSRNPILAVRYACLLPHAHILFCNIISEFGKRRDLVSA 211
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L+AY+ASKKHL++PNMYI R ID CG+C DYMKSR IYEDL +Q +T NIYVFNSLMNV
Sbjct: 212 LKAYEASKKHLNTPNMYIYRATIDTCGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNV 271
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N+HDL +TL +Y+NMQ LG+ DM SYNILLKACC+AG LAQ+IY E+KHLE+ G LK
Sbjct: 272 NSHDLSYTLNLYQNMQNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLK 331
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LDVFTYSTI+KVFAD K WQMALK+K+DMLSAGV+ N + WSSLINACA+AGLVEQA+ L
Sbjct: 332 LDVFTYSTIIKVFADVKLWQMALKIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQL 391
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FEEML AGCEPN+QC NI+L ACVEA Q+DRAFR F SW K + GE Y+ S
Sbjct: 392 FEEMLLAGCEPNTQCFNIILNACVEAYQYDRAFRFFHSWKGKKMLGSSGEGYN------S 445
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
N+ +T+ PN + NSH +F +RF F PTTTTYNIL+KAC TDYY KAL+ EM
Sbjct: 446 NIGQGHMHDVTSIPNGISNSHILNFAERFPFTPTTTTYNILLKACGTDYYHAKALIKEME 505
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
TVGLSPN ISW+ILID CG S NVEGA++ILK M + G+ PDV+AYTTAIKVCV SK
Sbjct: 506 TVGLSPNQISWSILIDICGASSNVEGAIEILKTMGDAGIKPDVIAYTTAIKVCVESKNFM 565
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QA +L+EEMK YQI+PN VTY TLL+ARS+YG LHEVQQCLA+YQDM KAG
Sbjct: 566 QALTLYEEMKCYQIRPNWVTYNTLLKARSKYGFLHEVQQCLAIYQDMRKAG 616
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 294 FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+N L+ D + K M+ +G+ + S++IL+ C + N A EI +K +
Sbjct: 483 YNILLKACGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASSNVEGAIEI---LKTM 539
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
G+ K DV Y+T +KV ++K + AL + E+M + PN +T+++L+ A + G
Sbjct: 540 GDAGI-KPDVIAYTTAIKVCVESKNFMQALTLYEEMKCYQIRPNWVTYNTLLKARSKYGF 598
Query: 414 ---VEQAMHLFEEMLQAGCEPN 432
V+Q + ++++M +AG +PN
Sbjct: 599 LHEVQQCLAIYQDMRKAGYKPN 620
>gi|357510555|ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500581|gb|AES81784.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 829
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/586 (56%), Positives = 421/586 (71%), Gaps = 21/586 (3%)
Query: 66 DLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIR 125
+LS RN+ + + + L L+EF ++ + S+ +V E++A+ ++ I+
Sbjct: 40 NLSPRNNSTSLLQTPLI----LKEFETVLHGELDSDVDV---------ELLANAVLIGIQ 86
Query: 126 EGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ + V+ L K+ G++ + L + NEC ++ G +E V LMEVL F+
Sbjct: 87 DRNVRTVIDSLNKVE--GLSEISLSTHLDASAIANECCHMVTCGHIEEAVELMEVLSRFQ 144
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
L + +L + I++ C+ LA+RYA ++P+A +LFC+ + EF K+RDLVSAL+AYD
Sbjct: 145 LSIAKLVQPSDIIKRCILSRKPTLAVRYASLLPQAPVLFCSIISEFSKRRDLVSALKAYD 204
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
A KK+L PNMYI R IID CG+CGD+MKSR IYEDL +Q +T NIYVFNSLMNVNAHDL
Sbjct: 205 ALKKNLKGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNAHDL 264
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++L +Y+NMQKLG+ DMASYNILLKACC+AG +AQ++Y ++KHLE+ G LKLDVFT
Sbjct: 265 SYSLNLYQNMQKLGLKPDMASYNILLKACCVAGRVDVAQDMYRDLKHLESVGQLKLDVFT 324
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YSTI+KVFADAK WQMALK+K DMLSAGV+ NTI WSSLINACA+AGLVEQA+ LFEEML
Sbjct: 325 YSTIIKVFADAKLWQMALKIKRDMLSAGVSLNTIAWSSLINACAHAGLVEQAIQLFEEML 384
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AGCEPN+QC NI+L ACVE CQ+DRAFRLF SW SK V L E + SN E
Sbjct: 385 LAGCEPNTQCFNIILHACVEGCQYDRAFRLFHSWKGSKMLVPLDESCN------SNSEQG 438
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
++T P + +SH SF +RF F PTTTTYNIL+KAC T+YY KAL+NEMRTVGLS
Sbjct: 439 GMHNVTTVPTGISSSHILSFTERFPFTPTTTTYNILLKACGTNYYHAKALINEMRTVGLS 498
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ISW+ILI+ CG S NV+G ++IL+ M + G+ PDV++YTTAIKVCV SK QA +L
Sbjct: 499 PNQISWSILINICGASENVDGVIEILRTMVDAGIKPDVISYTTAIKVCVESKNFTQALTL 558
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ EMK Y PNLVTY TLLRARS+YGSL EVQQ LA+YQDM KAG
Sbjct: 559 YREMKSYGTHPNLVTYNTLLRARSKYGSLREVQQGLAIYQDMRKAG 604
>gi|7413558|emb|CAB86037.1| putative protein [Arabidopsis thaliana]
Length = 798
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/628 (52%), Positives = 420/628 (66%), Gaps = 48/628 (7%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNSS-FTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIR + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIR--------------IIHGFG 229
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 230 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 289
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 290 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 349
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 350 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 409
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 410 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 469
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 470 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 526
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 527 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 586
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
IK EM+ YQI+PN
Sbjct: 587 IK----------------EMRRYQIKPN 598
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 41/144 (28%)
Query: 516 TTYNILMKACC--------TDYYRVKALM------------------------------- 536
T+YNIL+K CC D Y+ M
Sbjct: 322 TSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALK 381
Query: 537 --NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++M++VG++PN +W+ LI AC +G VE A + + M G P+ + + CV
Sbjct: 382 VKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACV 441
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNL 618
+ + +AF LF+ K + +L
Sbjct: 442 EACQYDRAFRLFQSWKGSSVNESL 465
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ KP N LM D + M+ + ++ + S+ IL+ C +G V+ A
Sbjct: 283 NIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQD 342
Query: 570 ILK---IMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I K M G+ D Y T IKV +K K A + ++MK + PN T+ +L+
Sbjct: 343 IYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLI 402
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
A + G V+Q ++++M +G
Sbjct: 403 SACANAGL---VEQANHLFEEMLASG 425
>gi|115452331|ref|NP_001049766.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|108707551|gb|ABF95346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|108707553|gb|ABF95348.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548237|dbj|BAF11680.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|215686909|dbj|BAG90779.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/620 (44%), Positives = 389/620 (62%), Gaps = 25/620 (4%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E + S ++T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PNLVTY TLL AR++Y
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNKY 609
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
GSL EVQQCLA+YQ+M KAG
Sbjct: 610 GSLQEVQQCLAIYQEMRKAG 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +N LM + + V M++ G+ D+ S++IL+ + G++ +
Sbjct: 493 VTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMD---IYGSSQNRDGAIQAL 549
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ G +KL+V Y+ +K + K ++AL + E+M + + PN +T+ +L+ A
Sbjct: 550 RRMQRVG-MKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNK 608
Query: 411 AGL---VEQAMHLFEEMLQAGCEPNSQCC-NILLQAC----------VEACQFDRAFRLF 456
G V+Q + +++EM +AG + N N++++ C E Q D+ F
Sbjct: 609 YGSLQEVQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKESF 668
Query: 457 RSWTLSKTQVALGEDYDGN 475
+ L K L +D D N
Sbjct: 669 K-LVLEKVTTFLQKDVDQN 686
>gi|242036071|ref|XP_002465430.1| hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor]
gi|241919284|gb|EER92428.1| hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor]
Length = 821
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/579 (46%), Positives = 371/579 (64%), Gaps = 13/579 (2%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCV 132
YYA +AS LA GRL +F + E + + G+ FA+ +S +++ G+ ++RE + V
Sbjct: 62 YYARVASNLAGAGRLRDFLLAAEGLRAAAGDDPSFAARISARLLSRGVAAAVRERGLPFV 121
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
+ + + V +E+ D + C+ LL+ + FV ++E L + V+ +
Sbjct: 122 LEFFRDAERVRVPAVEMLDADASDTVAGACRMLLEERRMVEFVEVVEALARYGFYVQGIV 181
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
++++ V + + ++AIRYA I P + +L CN + FGK+++L +AL + A K L
Sbjct: 182 NPMDVLKIFVKQRNPDIAIRYARIFPNSQLLLCNTMEAFGKRKELKNALLVFGALKDQLG 241
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
NM+ CR+IID+CG CG +++R I+E L + +T N YVFNSLMNVNA+ L + VY
Sbjct: 242 GINMFACRSIIDICGHCGSSVQARIIFEGLLADKITPNTYVFNSLMNVNAYSLSYNFSVY 301
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K+MQ L V D+ SYNILLK CC A LAQEIY E+K E G+LKLDVFTYST++KV
Sbjct: 302 KHMQNLSVPPDLTSYNILLKTCCNAREFNLAQEIYEEMKKKERNGLLKLDVFTYSTMIKV 361
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FADAK W+MA +KEDM G+ N +TWSSLIN AN+GLV++A+ + EEM++ GC+P
Sbjct: 362 FADAKVWKMASNIKEDMQVNGIRLNLVTWSSLINVYANSGLVDRAIEILEEMIRDGCQPT 421
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ C NI+L ACV++CQ+DRAFRLF SW S +++L + D K+ S +
Sbjct: 422 APCFNIILTACVKSCQYDRAFRLFYSWKESGIKISLSPEQKRGLDGGFTF-CKEYPSSGS 480
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
T VP F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+
Sbjct: 481 TILVVP------------FRPTVTTYNILMKACGTNAERAKSVMNEMRRNGLCPDLISWS 528
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+D G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +
Sbjct: 529 ILMDIYGTSQNRDGAVQALRRMQRVGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTH 588
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Q++PNLVTY TLL ARS YGSL EVQQCLA+YQ+M KAG
Sbjct: 589 QLKPNLVTYKTLLAARSNYGSLLEVQQCLAIYQEMRKAG 627
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +N LM + + V M++ G+ D+ S++IL+ + N A + +
Sbjct: 491 VTTYNILMKACGTNAERAKSVMNEMRRNGLCPDLISWSILMDIYGTSQNRDGAVQ---AL 547
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ G ++L+V Y+ +K + K ++AL + E+M + + PN +T+ +L+ A +N
Sbjct: 548 RRMQRVG-MRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAARSN 606
Query: 411 AGL---VEQAMHLFEEMLQAGCEPN 432
G V+Q + +++EM +AG + N
Sbjct: 607 YGSLLEVQQCLAIYQEMRKAGYQAN 631
>gi|326533124|dbj|BAJ93534.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534390|dbj|BAJ89545.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 837
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/637 (43%), Positives = 397/637 (62%), Gaps = 30/637 (4%)
Query: 29 PNKHPVTKLFPLASS----SSLSSIPTVHSSQTA--------LLSTVRRDLSSRNDYYAD 76
PN +P K+ PL S S + PT + + + LLS V + S+ DYY+
Sbjct: 35 PNPNPKAKVIPLLSDVGRLQSATPTPTPNGNPNSNPKGKVLPLLSDVGSNPSAI-DYYSR 93
Query: 77 MASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVL 136
+AS LA GRL +F + E + + G+ FA+ ++ +++ G+V ++RE + V+ L
Sbjct: 94 VASNLAGAGRLGDFLIAAEGLRAASGDAG-FAARINWRLLSRGVVAALREHGLPHVLEFL 152
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ + +GV + D + C++LLD + FV +E L VK + +
Sbjct: 153 RDADRIGVHAAVMLDADASDAIAAACRKLLDDRIMAEFVEAIEALASCGFFVKGIVDPMD 212
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D ++AIRYA I P + +L CN + FGK+++L AL+ + A K L NM
Sbjct: 213 VLKIFVRKRDPDMAIRYARIFPHSQLLLCNTMEAFGKRKELKYALKVFGALKDQLGGINM 272
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+C CG +++R I+E L ++ +T N +VFNSLMN NAH + + VYK+MQ
Sbjct: 273 FACRSIIDICSHCGSSVQARIIFEGLLAEKITPNTHVFNSLMNANAHSMSYNFSVYKHMQ 332
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KLGV D+ASYNILLK CC A AQEIY E+K E G+LKLDVFTYST++KVFA+A
Sbjct: 333 KLGVRPDLASYNILLKTCCNAREFNTAQEIYEEMKKKENDGILKLDVFTYSTMMKVFAEA 392
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W+MA +K+DM + G N +TWSSLINA AN+GL++ A+ + EEM++ GC+P + C
Sbjct: 393 KMWKMASNIKDDMRAVGARLNLVTWSSLINAYANSGLIDGAIEILEEMIRDGCQPTAPCF 452
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TP 494
NI+L A V++CQ+DRAFRLF SW +V+L + G+ N ++ TN T
Sbjct: 453 NIILTALVKSCQYDRAFRLFNSWMEFGIKVSLSLEQKGSLP--DNFTFCEEHPSTNGGTI 510
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
VP F+PT TTYNILM AC T+ R K++MNEM+ GL P+ ISW+IL
Sbjct: 511 LVVP------------FRPTVTTYNILMMACGTNDERAKSVMNEMKRNGLCPDRISWSIL 558
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+D G S N GA+Q L+ M+ G+ +V AYT AIK CV SK LK A LFEEMK +Q+
Sbjct: 559 MDIYGTSQNRNGAIQALRRMQRVGIKLNVSAYTVAIKACVESKDLKLALHLFEEMKAHQL 618
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN+VTY TLL ARS+YGSL E+Q+CLA+YQ+M +AG
Sbjct: 619 KPNMVTYRTLLTARSKYGSLKEIQKCLAIYQEMRQAG 655
>gi|357112772|ref|XP_003558181.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Brachypodium distachyon]
Length = 849
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/635 (43%), Positives = 391/635 (61%), Gaps = 26/635 (4%)
Query: 29 PNKHPVTKLFP-------LASSSSLSSI-----PTVHSSQTALLSTVRRDLSSRNDYYAD 76
PN K+ P L S++S S+ P++ + LLS V + S+ +YY+
Sbjct: 35 PNPKAKAKVIPVLSDVGRLQSATSTSTPNGNPNPSLKAKVLPLLSDVGSNPSAI-EYYSR 93
Query: 77 MASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVL 136
+AS LA GRL +F + E + + G+ FA+ +S +++ G+V ++ + + V+ L
Sbjct: 94 VASNLAGAGRLGDFLIAAEGLRAASGDAG-FAARISWRVLSRGVVVALGQHGLPHVLEFL 152
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ + +G+ + D + C++LL+ + FV +E L VK + +
Sbjct: 153 RDADRIGLHAAAMLDADASDAVAAACRQLLEERIMTEFVKAIEDLANCGFFVKGIVDPMD 212
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D ++AIRYA I P + +L CN + FGK+++L AL+ + A K L NM
Sbjct: 213 VLKIFVKKRDPDMAIRYARIFPHSQLLLCNTMEAFGKRKELKHALKVFGALKDQLGGINM 272
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+C CG +++R I+E L ++ +T N +VFNSLMN NAH L + L VYK+MQ
Sbjct: 273 FACRSIIDICSHCGSSVQARIIFEGLLAEKITPNTHVFNSLMNANAHSLSYNLSVYKHMQ 332
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KLGV D+ASYNILLK CC A AQEIY E+K E G+LKLDVFTYST++KVFA+A
Sbjct: 333 KLGVSPDLASYNILLKTCCNAREFDSAQEIYEEMKKKEQNGLLKLDVFTYSTMMKVFAEA 392
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W+MA +KEDM + G N +TWSSLINA AN+GLV+ A+ + EEM++ GC+P + C
Sbjct: 393 KMWKMASNIKEDMRAVGARLNLVTWSSLINAYANSGLVDGAIEILEEMIRDGCQPTAPCF 452
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
NI+L A V++ Q+DRAFRLF SW S +++L + G + S T
Sbjct: 453 NIILTALVKSRQYDRAFRLFYSWKESGIRISLSLEQKGCLPDNFTFCKEHPSSNGGTILE 512
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
VP F+PT TTYNILM AC T+ R +++MNEMR GL P+ ISW+IL+D
Sbjct: 513 VP------------FRPTVTTYNILMMACGTNDERARSIMNEMRRNGLCPDRISWSILMD 560
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G S N GA+Q L+ M+ G+ +V AYT AIK CV SK L A LFEEMK +Q++P
Sbjct: 561 IYGTSQNRNGAIQALRRMQRVGIKLNVSAYTVAIKACVESKDLNTALHLFEEMKAHQLKP 620
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
N+VTY TLL AR +YGSL E+QQCLA+YQ+M KAG
Sbjct: 621 NMVTYRTLLTARCKYGSLQEIQQCLAIYQEMRKAG 655
>gi|218192576|gb|EEC75003.1| hypothetical protein OsI_11066 [Oryza sativa Indica Group]
Length = 668
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/587 (43%), Positives = 360/587 (61%), Gaps = 25/587 (4%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E + S ++T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PNL
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNL 596
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I +D++S V LN+ ++SL+N A+ + +E+ + M + G +NI+L C
Sbjct: 376 IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCV 435
Query: 336 LAGNTVLAQEIYGEVKHL--------EAKGVL----------------------KLDVFT 365
+ A ++ + K E KG + V T
Sbjct: 436 KSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCEEHTSNSSTLLVVPFRPTVTT 495
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++K A + A V +M G+ P+ I+WS L++ ++ + A+ M
Sbjct: 496 YNILMK--ACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQ 553
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED----YDGNTDR 478
+ G + N + ++ACVE A LF + + LG++ YD D+
Sbjct: 554 RVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLGQESHDSYDQQVDQ 610
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI-- 570
P +N LM + ++ M+ +G+ P+ S+ IL+ C + + A +I
Sbjct: 280 PNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYE 339
Query: 571 -LKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+K ++G+ DV Y+T +KV +K K A + ++M+ ++ NLVT+ +L+ A
Sbjct: 340 EIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINA- 398
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
Y + V + + + ++M + G
Sbjct: 399 --YANSGLVDRAIEILEEMTRDG 419
>gi|27476073|gb|AAO17004.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 572
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/561 (42%), Positives = 341/561 (60%), Gaps = 25/561 (4%)
Query: 33 PVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAM 92
P ++ P S + +++P LLS V RD ++ YY+ +AS L GRL EF +
Sbjct: 34 PPSRCRPSPSPKAKAALP--------LLSDVGRDPTAIK-YYSRVASNLVGAGRLREFLL 84
Query: 93 IVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG 152
E + + G+ F +S +++ G+ ++R+ + V+ L+ +G+ + D
Sbjct: 85 AAEGLRAASGDAG-FEGRISRRLLSRGVAAALRDQGLPHVLEFLRDAGRVGIRAAVMLDA 143
Query: 153 SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR 212
+ + C+ LL + FV +E L + V+ + + ++++ V K D N+AIR
Sbjct: 144 DAYDTVAAACRLLLAERSMTEFVEAVEALAQCGFFVQGIVDPMDVLKIFVKKRDPNMAIR 203
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
YA I P++ +L CN + FGK+++L AL + A K NM+ CR+IID+CG CG
Sbjct: 204 YARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSS 263
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ LGV D+ SYNILLK
Sbjct: 264 VQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLK 323
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC A LAQEIY E+K E G+LKLDVFTYST++KVFADAK W++A +K+DM SA
Sbjct: 324 TCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSA 383
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI+L CV++CQ+DRA
Sbjct: 384 GVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCVKSCQYDRA 443
Query: 453 FRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
FRLF W +++L + G D S E + S ++T VP F
Sbjct: 444 FRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVVP------------F 489
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D G S N +GA+Q L
Sbjct: 490 RPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQAL 549
Query: 572 KIMREDGMSPDVVAYTTAIKV 592
+ M+ GM +V AYT AIKV
Sbjct: 550 RRMQRVGMKLNVTAYTVAIKV 570
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 339 NTVLAQEIYGEVKH-LEAKGVLK-----LDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
NT+ A E+KH L G LK +++F +I+ + A + E +L+
Sbjct: 217 NTMEAFGKRKELKHALTVFGALKDQFGGINMFACRSIIDICGHCGSSVQARIIFEGLLAD 276
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+TPN ++SL+N NA +++ M G P+ NILL+ C A ++ A
Sbjct: 277 KITPNVYVFNSLMNV--NAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLA 334
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ ++ K++ + F YS+ K F+
Sbjct: 335 QEIY-----------------------EEIKKKEQNGLLKLDVFT----YSTMMKVFA-- 365
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ M +D + +M++ G+ N ++W+ LI+A SG V+ A++IL+
Sbjct: 366 ------DAKMWKLASD------IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILE 413
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
M DG P + + CV+S + +AF LF + K Y ++ +L
Sbjct: 414 EMTRDGCQPTAPCFNIILTGCVKSCQYDRAFRLFYDWKEYGVKISL 459
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI-- 570
P +N LM + ++ M+ +G+ P+ S+ IL+ C + + A +I
Sbjct: 280 PNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYE 339
Query: 571 -LKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+K ++G+ DV Y+T +KV +K K A + ++M+ ++ NLVT+ +L+ A
Sbjct: 340 EIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINA- 398
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
Y + V + + + ++M + G
Sbjct: 399 --YANSGLVDRAIEILEEMTRDG 419
>gi|222624701|gb|EEE58833.1| hypothetical protein OsJ_10405 [Oryza sativa Japonica Group]
Length = 483
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/423 (50%), Positives = 285/423 (67%), Gaps = 15/423 (3%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
++++ V K D N+AIRYA I P++ +L CN + FGK+++L AL + A K NM
Sbjct: 3 VLKIFVKKRDPNMAIRYARIFPQSQLLLCNTMEAFGKRKELKHALTVFGALKDQFGGINM 62
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
+ CR+IID+CG CG +++R I+E L + +T N+YVFNSLMNVNAH + VYK+MQ
Sbjct: 63 FACRSIIDICGHCGSSVQARIIFEGLLADKITPNVYVFNSLMNVNAHSFSYNFSVYKHMQ 122
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
LGV D+ SYNILLK CC A LAQEIY E+K E G+LKLDVFTYST++KVFADA
Sbjct: 123 NLGVPPDLTSYNILLKTCCNAKEYKLAQEIYEEIKKKEQNGLLKLDVFTYSTMMKVFADA 182
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K W++A +K+DM SAGV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C
Sbjct: 183 KMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCF 242
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPN 495
NI+L CV++CQ+DRAFRLF W +++L + G D S E + S ++T
Sbjct: 243 NIILTGCVKSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLL 300
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
VP F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+
Sbjct: 301 VVP------------FRPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILM 348
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++
Sbjct: 349 DIYGSSQNRDGAIQALRRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLK 408
Query: 616 PNL 618
PNL
Sbjct: 409 PNL 411
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 43/252 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I +D++S V LN+ ++SL+N A+ + +E+ + M + G +NI+L C
Sbjct: 191 IKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNIILTGCV 250
Query: 336 LAGNTVLAQEIYGEVKHL--------EAKGVL----------------------KLDVFT 365
+ A ++ + K E KG + V T
Sbjct: 251 KSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCEEHTSNSSTLLVVPFRPTVTT 310
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++K A + A V +M G+ P+ I+WS L++ ++ + A+ M
Sbjct: 311 YNILMK--ACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQ 368
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED----YDGNTDR--- 478
+ G + N + ++ACVE A LF + + LG++ YD D+
Sbjct: 369 RVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLGQESHDSYDQQVDQRTY 428
Query: 479 --ISNMEHKDKQ 488
S+ HK Q
Sbjct: 429 AAWSDQAHKKHQ 440
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI-- 570
P +N LM + ++ M+ +G+ P+ S+ IL+ C + + A +I
Sbjct: 95 PNVYVFNSLMNVNAHSFSYNFSVYKHMQNLGVPPDLTSYNILLKTCCNAKEYKLAQEIYE 154
Query: 571 -LKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+K ++G+ DV Y+T +KV +K K A + ++M+ ++ NLVT+ +L+ A
Sbjct: 155 EIKKKEQNGLLKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAY 214
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G V + + + ++M + G
Sbjct: 215 ANSGL---VDRAIEILEEMTRDG 234
>gi|168055626|ref|XP_001779825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668737|gb|EDQ55338.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 734
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 341/617 (55%), Gaps = 16/617 (2%)
Query: 39 PLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVV 98
P S S+L+ T+ + +RR YY +A +LA +G + +F +++ +
Sbjct: 99 PSTSESALAQFETISPEDVKV--CLRR--KGMLKYYTLLAGQLASEGYMTQFTELLQMLA 154
Query: 99 VSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL 158
+ + F L + G + ++D V +L+ L + G S LL
Sbjct: 155 DAGIDKELFTYKLDTAQLNIGFRLLLSRQQLDLFVSILRNLTKAGYTAPNFVQKSTLDLL 214
Query: 159 KNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP 218
+E L+ +G E V L+E L E V+ L + +V C +++LA R+ ++
Sbjct: 215 ADELLSLVKAGRTEFCVELVEYLTESGFFVRNLIDPVSVVSSCAKLRNIDLARRFVELLS 274
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
R + +REF + +L S + D K+ P+++ R +ID CG + K+ +
Sbjct: 275 RNPWHYNLIIREFSRHGNLRSCFKVLDFMKELGVMPDVFTYRVLIDSCGRHKEPSKATIV 334
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+E + + N +V+NS+MNVN +L +++MQ G+ AD+ SYNILLKA +G
Sbjct: 335 FEKMLNDGFEPNRFVYNSIMNVNVGNLSEVRRYFQHMQGAGIAADVTSYNILLKAYAASG 394
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA ++Y ++K G + LDV YST++ VF AK W+ AL+VK DML AGVTPN
Sbjct: 395 RADLAGDLYAQIKK---AGKVTLDVVFYSTLINVFGKAKMWEEALRVKADMLEAGVTPNV 451
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+TW+S+I ACA AGLV+Q+ F+EML AGC PN C N+LLQAC+ A QFDRAF LF
Sbjct: 452 VTWTSIIGACATAGLVDQSFREFDEMLNAGCRPNVNCYNMLLQACIMASQFDRAFLLFEE 511
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF---DKRFS-FKPT 514
W + + E ++ S K + IT P + S+ D R + +P
Sbjct: 512 WKTTGRMRSYSEIFN-----YSAPLAKTHELITVIPGSLLQSNLGEKIDEDVRLACCRPN 566
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN +MKAC + +V++LM EMR +GL P+ SW+IL+D+ G G+VEGA + L+ M
Sbjct: 567 IITYNCMMKACGSASEKVRSLMREMRALGLVPDVKSWSILLDSYGSKGDVEGASEALEEM 626
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PDVVAYT+ I+ CV++ L++AF F +MK ++PN VTY +LLR YG+L
Sbjct: 627 KAAGFKPDVVAYTSLIQACVQAGHLEKAFDYFSKMKAAGVRPNAVTYNSLLRRHRNYGTL 686
Query: 635 HEVQQCLAVYQDMWKAG 651
EVQ+ LA+Y++M +AG
Sbjct: 687 PEVQRALALYEEMREAG 703
>gi|413956099|gb|AFW88748.1| hypothetical protein ZEAMMB73_433087 [Zea mays]
gi|413956100|gb|AFW88749.1| hypothetical protein ZEAMMB73_433087 [Zea mays]
Length = 487
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 208/306 (67%), Gaps = 21/306 (6%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K E G+LKLDVFTYST++KVFADAK W+MA +KEDM + GV N +TWSSLINA A
Sbjct: 1 MKKKERDGLLKLDVFTYSTMMKVFADAKMWKMASNIKEDMQANGVRLNLVTWSSLINAYA 60
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+GLV++A+ + +EM++ GC+P + C NI+L ACV++CQ+DRAFRLF SW S +++L
Sbjct: 61 NSGLVDRAIEILKEMIRDGCQPTAPCFNIILTACVKSCQYDRAFRLFYSWKESGIKISLS 120
Query: 470 ED----YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+ DG + D +T VP F+PT TTYNILMKAC
Sbjct: 121 SEQKRVIDGGFTFCKEYPNND-----STILVVP------------FRPTVTTYNILMKAC 163
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T+ R K+ MNEMR GL P+ ISW+ILID G S N +GA+Q L+ M+ GM +V A
Sbjct: 164 GTNAERAKSTMNEMRRNGLCPDLISWSILIDIYGSSQNRDGAVQALRRMQRVGMRLNVSA 223
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT AIK CV +K LK A LFEEMK +Q++PNLVTY TLL AR YGSL EVQQCLA+YQ
Sbjct: 224 YTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAARINYGSLQEVQQCLAIYQ 283
Query: 646 DMWKAG 651
+M KAG
Sbjct: 284 EMRKAG 289
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 291 IYVFNSLM---NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ +N LM NA K T+ M++ G+ D+ S++IL+ + G++
Sbjct: 153 VTTYNILMKACGTNAERAKSTMN---EMRRNGLCPDLISWSILID---IYGSSQNRDGAV 206
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ ++ G ++L+V Y+ +K + K ++AL + E+M + + PN +T+ +L+ A
Sbjct: 207 QALRRMQRVG-MRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAA 265
Query: 408 CANAGL---VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
N G V+Q + +++EM +AG + N L + VE C+
Sbjct: 266 RINYGSLQEVQQCLAIYQEMRKAGFQANDY---YLKELIVEWCE 306
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++ CG + ++++ ++R + ++ ++ L+++ ++ + ++
Sbjct: 151 PTVTTYNILMKACGTNAE--RAKSTMNEMRRNGLCPDLISWSILIDIYGSSQNRDGAVQA 208
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ MQ++G+ ++++Y + +KAC + LA ++ E+K + LK ++ TY T++
Sbjct: 209 LRRMQRVGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQ----LKPNLVTYKTLLA 264
Query: 372 V---FADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + Q L + ++M AG N LI
Sbjct: 265 ARINYGSLQEVQQCLAIYQEMRKAGFQANDYYLKELI 301
>gi|302769928|ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
gi|300164027|gb|EFJ30637.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
Length = 532
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 295/530 (55%), Gaps = 40/530 (7%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVV--SEGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y A +LA+ GRL E +V+ + + G+ F ++ + V G V + + R+
Sbjct: 26 FYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHAVRDGCVSVLEQRRLP 85
Query: 131 CVVGVLKKLNELGVA-PLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
+V + L+E+G++ P + G +L+ +EC RLL VE + +E L + VK
Sbjct: 86 YLVEFCRALSEMGISSPSDYLGRYGLQLVIDECGRLLQENRVEECIRCLERLAKCGFVVK 145
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF-CNFV-REFGKKRDLVSALRAYDAS 247
L + ++ C + LA+RYAC++P DIL CN + ++F + DL S + + A
Sbjct: 146 NLVKPTLCMEACARMHNTALALRYACLLP--DILHSCNMIMQKFRDQGDLQSVFQVFQAL 203
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ P+MY +ID CG CGD K+ AI+E L LN+YV NS+MN +A +++
Sbjct: 204 ESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVCNSMMNAHAGNIQH 263
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L +Y+ MQ G+ AD+ +YNI+ KAC L+ N VLA +Y E+K E +KL+V +Y
Sbjct: 264 VLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE----IKLNVLSYG 319
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++++F +AK ++K DM S G+ PN +TW+SL+ AC+ LVE+ + ++++M+QA
Sbjct: 320 TLIQIFGEAKMLDRVFQMKRDMDSTGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQA 379
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN+ N LL ACV+ Q D+A +LFR W S +A +E +D+
Sbjct: 380 GCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA-------------GIEVQDE 426
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
I +S + +P + YN +M+AC + +A+M EM + GL P+
Sbjct: 427 SVI-----------FSEW-----VRPDSVAYNTMMRACDKLPKQAEAVMQEMVSSGLRPD 470
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
SW ILI++ G +G+ +GA+Q + M + G+ DVVAYT IKV +SK
Sbjct: 471 KRSWCILINSYGCNGDKQGAVQAFQRMGKSGIIADVVAYTAIIKVRFKSK 520
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ ++ + ++AC NT LA L +L + + + I++ F D
Sbjct: 143 VVKNLVKPTLCMEACARMHNTALA---------LRYACLLPDILHSCNMIMQKFRDQGDL 193
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q +V + + S GV P+ ++ LI+AC G E+A +FE +L+AG N CN +
Sbjct: 194 QSVFQVFQALESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVCNSM 253
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A A RL+R S G D T I + ++ P
Sbjct: 254 MNA--HAGNIQHVLRLYRQMQGS------GIAADVTTYNIVFKACR----LSKNPVLALR 301
Query: 500 SHYSSFDKRFSFKPTT--TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ K + T I +A D RV + +M + G+ PN ++WT L+ A
Sbjct: 302 LYEELKAKEIKLNVLSYGTLIQIFGEAKMLD--RVFQMKRDMDSTGIVPNVVTWTSLVGA 359
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK------- 610
C VE LQ+ + M + G +P+ Y + CV + +A LF E K
Sbjct: 360 CSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA 419
Query: 611 -----------HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+ V Y T++RA + +Q AV Q+M +G
Sbjct: 420 GIEVQDESVIFSEWVRPDSVAYNTMMRACDKLP-----KQAEAVMQEMVSSG 466
>gi|302765062|ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
gi|300166766|gb|EFJ33372.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
Length = 533
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 294/531 (55%), Gaps = 41/531 (7%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVV--SEGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y A +LA+ GRL E +V+ + + G+ F ++ + V G V + + R+
Sbjct: 26 FYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHAVRDGCVSVLEQRRLP 85
Query: 131 CVVGVLKKLNELGVA-PLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
VV + L+ELG++ P + G +L+ +EC RLL VE + +E L + VK
Sbjct: 86 YVVEFCRALSELGISSPSDYLGRYGLQLVIDECGRLLQENRVEECIRCLERLAKCGFVVK 145
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-FCNFV-REFGKKRDLVSALRAYDAS 247
L + ++ C + LA+RYAC++P DIL CN + ++F + DL S + + A
Sbjct: 146 NLVKPTLCMEACARMHNTALALRYACLLP--DILQSCNMIMQKFRDQGDLQSVFQVFQAL 203
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ P+MY +ID CG CGD K+ AI+E L LN+YV NS+MN +A +++
Sbjct: 204 ESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVCNSMMNAHAGNIQH 263
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L +Y+ MQ G+ AD+ +YNI+ KAC L+ N VLA +Y E+K E +K++V +Y
Sbjct: 264 VLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE----IKMNVLSYG 319
Query: 368 TIVKV-FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
T+++V F +AK ++K DM S G+ PN +TW+SL+ AC+ LVE+ + ++++M+Q
Sbjct: 320 TLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQ 379
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AGC PN+ N LL ACV+ Q D+A +LFR W S +A +E +D
Sbjct: 380 AGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA-------------GIEVQD 426
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
+ +I +S + +P + YN +M+AC + +A+M EM + GL P
Sbjct: 427 ESAI-----------FSEW-----VRPDSVAYNTMMRACDKLPKQAEAVMQEMVSSGLRP 470
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+ SW ILI++ G +G+ +GA+Q + M G+ DVVAYT IKV S+
Sbjct: 471 DKRSWCILINSYGCNGDKQGAVQAFQRMGRSGIIADVVAYTAIIKVRFESR 521
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 145/353 (41%), Gaps = 49/353 (13%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ ++ + ++AC NT LA L +L + + + I++ F D
Sbjct: 143 VVKNLVKPTLCMEACARMHNTALA---------LRYACLLPDILQSCNMIMQKFRDQGDL 193
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q +V + + S GV P+ ++ LI+AC G E+A +FE +L+AG N CN +
Sbjct: 194 QSVFQVFQALESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVCNSM 253
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A A RL+R S G D T I ++ + N V
Sbjct: 254 MNA--HAGNIQHVLRLYRQMQGS------GIAADVTTYNIVF------KACRLSKNPVLA 299
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYY---RVKALMNEMRTVGLSPNHISWTILID 556
K K +Y L++ + RV + ++M + G+ PN ++WT L+
Sbjct: 300 LRLYEELKAKEIKMNVLSYGTLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVG 359
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK------ 610
AC VE LQ+ + M + G +P+ Y + CV + +A LF E K
Sbjct: 360 ACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRIL 419
Query: 611 ------------HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+ V Y T++RA + +Q AV Q+M +G
Sbjct: 420 AGIEVQDESAIFSEWVRPDSVAYNTMMRACDKLP-----KQAEAVMQEMVSSG 467
>gi|224102265|ref|XP_002334200.1| predicted protein [Populus trichocarpa]
gi|222870081|gb|EEF07212.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 187/273 (68%), Gaps = 5/273 (1%)
Query: 49 IPTVHSSQTALLSTV----RRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNV 104
IP VHS LLST+ + SS DY+A++ASKLA+DGRL++F MI ESV+ S
Sbjct: 45 IPAVHSRSPPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEP 104
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
S F + LS+ VA GI K++++G +DCVV LKK ELGV+ L+ DG LLK EC R
Sbjct: 105 SSFVAALSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKECIR 164
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP-RADIL 223
+++ G+VE V +ME L F KEL + I+++CV+K + +A+RYA I P IL
Sbjct: 165 IVNCGDVEQVVYIMETLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRIL 224
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN + EFG+K L SAL AYD +K LS PNMY+ RTIIDVCG+CGDYMKSR IYEDL
Sbjct: 225 FCNIISEFGRKGHLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLI 284
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
++ V N+YVFNSLMNVNAHDL + V+KNMQ
Sbjct: 285 NRKVIPNVYVFNSLMNVNAHDLGYPFRVFKNMQ 317
>gi|108707552|gb|ABF95347.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215765857|dbj|BAG87554.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 451
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 187/274 (68%), Gaps = 15/274 (5%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W++A +K+DM SAGV N +TWSSLINA AN+GLV++A+ + EEM + GC+P + C NI
Sbjct: 2 WKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAIEILEEMTRDGCQPTAPCFNI 61
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEHKDKQSITNTPNFV 497
+L CV++CQ+DRAFRLF W +++L + G D S E + S ++T V
Sbjct: 62 ILTGCVKSCQYDRAFRLFYDWKEYGVKISLSPEQKGCFGDNFSYCE--EHTSNSSTLLVV 119
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P F+PT TTYNILMKAC T+ R K++MNEMR GL P+ ISW+IL+D
Sbjct: 120 P------------FRPTVTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDI 167
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G S N +GA+Q L+ M+ GM +V AYT AIK CV +K LK A LFEEMK +Q++PN
Sbjct: 168 YGSSQNRDGAIQALRRMQRVGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPN 227
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LVTY TLL AR++YGSL EVQQCLA+YQ+M KAG
Sbjct: 228 LVTYKTLLTARNKYGSLQEVQQCLAIYQEMRKAG 261
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +N LM + + V M++ G+ D+ S++IL+ + G++ +
Sbjct: 125 VTTYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMD---IYGSSQNRDGAIQAL 181
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ G +KL+V Y+ +K + K ++AL + E+M + + PN +T+ +L+ A
Sbjct: 182 RRMQRVG-MKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNK 240
Query: 411 AGL---VEQAMHLFEEMLQAGCEPNSQCC-NILLQAC----------VEACQFDRAFRLF 456
G V+Q + +++EM +AG + N N++++ C E Q D+ F
Sbjct: 241 YGSLQEVQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKESF 300
Query: 457 RSWTLSKTQVALGEDYDGN 475
+ L K L +D D N
Sbjct: 301 K-LVLEKVTTFLQKDVDQN 318
>gi|168063169|ref|XP_001783546.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664933|gb|EDQ51635.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 198/341 (58%), Gaps = 25/341 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+P++Y R +ID CG C + K+ ++E + N++V+NSLMNV+ DL Y
Sbjct: 7 APDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMNVSVGDLDEVQRYY 66
Query: 313 KNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++MQ+ G+ ++AS+NILLKA G LA ++Y ++ G L LDV +Y+ ++
Sbjct: 67 QHMQQGAGITGNLASFNILLKAYAACGRADLAADLYFRIQQ---TGELNLDVVSYNAVIN 123
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
VF AK W+ AL+VK D++ AGVTPN +TW+S+I ACA AGLVE+ F+EML AGC P
Sbjct: 124 VFGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEACATAGLVERVFQEFDEMLSAGCCP 183
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N C N LLQACV A Q +RAF+LF+ W T +I H +
Sbjct: 184 NVDCYNALLQACVMAGQNERAFQLFQEWK--------------QTGQI----HIFPRPSP 225
Query: 492 NTPNFVPNSHYSSFDKRFS-FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
+ ++ ++ S R S KP TYN +MKAC R+++LM EM+ L P+ S
Sbjct: 226 SWNGYIDEENWDSL--RLSRCKPNLLTYNWMMKACGAAPERIRSLMLEMQAFNLIPDVTS 283
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
W+IL+ A G +G++EG + K MR PDVVAYTT IK
Sbjct: 284 WSILLGAYGSNGDLEGCMDTFKEMRRARFKPDVVAYTTLIK 324
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 22/229 (9%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M GV P+ T+ +LI++C +A +FE ML+ G +PN N L+ V
Sbjct: 1 MREFGVAPDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMN--VSVGD 58
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D R ++ + G GN N+ K + + Y +
Sbjct: 59 LDEVQRYYQ-------HMQQGAGITGNLASF-NILLKAYAACGRAD--LAADLYFRIQQT 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRT------VGLSPNHISWTILIDACGGSG 562
+YN ++ + R K +R G++PN ++WT +I+AC +G
Sbjct: 109 GELNLDVVSYNAVINV----FGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEACATAG 164
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
VE Q M G P+V Y ++ CV + + ++AF LF+E K
Sbjct: 165 LVERVFQEFDEMLSAGCCPNVDCYNALLQACVMAGQNERAFQLFQEWKQ 213
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGAL 568
FKP YN LM D V+ M+ G++ N S+ IL+ A G + A
Sbjct: 40 GFKPNVFVYNSLMNVSVGDLDEVQRYYQHMQQGAGITGNLASFNILLKAYAACGRADLAA 99
Query: 569 QI-LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +I + ++ DVV+Y I V R+K ++A + ++ + PN+VT+ +++ A
Sbjct: 100 DLYFRIQQTGELNLDVVSYNAVINVFGRAKMWEKALRVKADIIEAGVTPNVVTWTSIIEA 159
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + V Q + +M AG
Sbjct: 160 CATAGLVERVFQ---EFDEMLSAG 180
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR G++P+ ++ LID+CG A + + M +DG P+V Y + + V V
Sbjct: 1 MREFGVAPDLYTYRALIDSCGRCNESSKAAVVFETMLKDGFKPNVFVYNSLMNVSVGD-- 58
Query: 599 LKQAFSLFEEMKH-YQIQPNLVTYITLLRARSRYG 632
L + ++ M+ I NL ++ LL+A + G
Sbjct: 59 LDEVQRYYQHMQQGAGITGNLASFNILLKAYAACG 93
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 59/411 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL 318
++I CG + ++ + E +R+Q V+ N+ +NS ++ A K L++ + M +
Sbjct: 292 SVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTV 351
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV-------------------- 358
G++ + SYN AC + G V A E+ +K + A+G+
Sbjct: 352 GLVPTVISYNSATAACAVNGRWVEALEL---LKEMPAQGIAPNTISYNSALDACAKGGQW 408
Query: 359 ---LKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+KL D+ ++++ + + W+ A+++ +M +AG+TPN IT++S
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSA 468
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I AC + ++AM LF EM G PN N ++ AC + Q++ A +L +
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG--MPAR 526
Query: 465 QVALGE-DYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
VA Y+ + E + Q + P P KP +YN
Sbjct: 527 GVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGP-------------KPDIISYNSA 573
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ AC + L+ +M TVGL+PN +S+ I ACG + A++ILK M+ G
Sbjct: 574 VTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGA 633
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+P+++ Y+ AI C + R K+A L +++ + P+ TY+T++ A R
Sbjct: 634 TPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 134/583 (22%), Positives = 245/583 (42%), Gaps = 103/583 (17%)
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE-----FRLP 187
+GVL + E + P G+ + G+ + V L +L E +R
Sbjct: 46 LGVLSRRGEGSLEPSTRSRGAASR-----------GGKPKSLVKLKSILLEAKGRDWRTA 94
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF---GKKRDLVSALRAY 244
+ LDE F+I ++ N+AI AC R +RE G D+V+ A
Sbjct: 95 LAALDE-FKISGGSLDTTSYNIAI-AACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAI 152
Query: 245 DASKKHLS------------------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
A K +P++ + I C G + ++ + E + +Q
Sbjct: 153 AACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQG 212
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +NS + A ++ +++ + + + G +YN ++ AC G + A
Sbjct: 213 VPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAM 272
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ G++ + + DV +YS+++ + W+ A+ + E M + GV+PN I+++S
Sbjct: 273 DLLGQMLTND----IPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSA 328
Query: 405 INACANA----------------GLVE-------------------QAMHLFEEMLQAGC 429
I+ACA GLV +A+ L +EM G
Sbjct: 329 IDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGI 388
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKD 486
PN+ N L AC + Q+++A +L R + +G D D N+ + +
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMS------TVGSDPDIISFNSAIDACGRGQQ 442
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
++ +P + P TYN ++AC + L EM T GL
Sbjct: 443 WETAVELLREMPTA---------GLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGL 493
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN +++ +IDAC E A+Q+L M G++PDV++Y +AI+ C + ++ + A
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L + M +P++++Y + + A ++ G E L + +DM
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRWREA---LGLLKDM 593
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+ ++ID C + + + + ++ V ++ +NS + + L+
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M G D+ SYN + AC +G +E G +K + G L + +Y +
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRW---REALGLLKDMATVG-LTPNTVSYGAAI 609
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ W +A+++ ++M + G TPN IT+S+ I+ACA G ++A+ L ++ + G
Sbjct: 610 HACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLT 669
Query: 431 PNSQ 434
P++Q
Sbjct: 670 PDAQ 673
>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 49/420 (11%)
Query: 236 DLVSALRAYDASKK------HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
D ALRA D K+ H S M +I CG G + ++ + ++ + ++
Sbjct: 9 DRRKALRALDGMKRLPRELLHQKSHCM-----VITACGRGGQWEQAVKLLREMPTAGLSP 63
Query: 290 NIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N++ A K L + K M +G+ D+ +Y+ + AC A +
Sbjct: 64 NVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALAL- 122
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI-------- 399
+K + A G L DV TYS+ V A + W+ AL + ++M + G+TPN I
Sbjct: 123 --LKEMTAVG-LTPDVITYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSM 179
Query: 400 ----TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T++S I+ C+ G ++ + L +EM G PN N + AC + Q+ A L
Sbjct: 180 SPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALAL 239
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF---- 511
+ T V L D IS D S T P + + +
Sbjct: 240 LKE----MTAVGL------TPDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEM 289
Query: 512 -----KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +Y+ + D ++V AL+ +M VGL+P+ I+ IDAC G E
Sbjct: 290 TVVGLTPNVVSYSAAIACAKGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWE 349
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL +LK M G++P VV Y +AI C R R K+ L EEM+ + P+++TY L+
Sbjct: 350 TALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHALM 409
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 64/286 (22%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A+K+ +M +AG++PN IT++++ ACA + A+ L +EM G P+ +
Sbjct: 46 WEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSS 105
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ AC + Q+ A L K+ ++ TP+ +
Sbjct: 106 AVDACAKGEQWKGALALL----------------------------KEMTAVGLTPDVI- 136
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL-- 554
TY+ + AC + AL+ EM VGL+PN IS+ L
Sbjct: 137 ------------------TYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPS 178
Query: 555 ----------IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
ID C G + L +LK M G++P+V+ Y +AI C + + K+A +
Sbjct: 179 MSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALA 238
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L +EM + P++++Y + + A S+ G+ ++ C + WK
Sbjct: 239 LLKEMTAVGLTPDVISYSSAIDACSK-GATAQLFPC--AKGEQWKG 281
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV------------ 300
+PN+ + ID C G + ++ A+ +++ + +T ++ ++S ++
Sbjct: 214 TPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPC 273
Query: 301 -NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
K L + K M +G+ ++ SY+ + AC +A + +K + A G L
Sbjct: 274 AKGEQWKGALALLKEMTVVGLTPNVVSYSAAI-ACAKGDQWKVALAL---LKKMTAVG-L 328
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV T ++ + + W+ AL + ++M + G+TP+ + ++S I+ACA G ++ +
Sbjct: 329 TPDVITCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVD 388
Query: 420 LFEEMLQAGCEPNSQCCNILLQACV 444
L EEM + G P+ + L+ CV
Sbjct: 389 LLEEMRELGVVPDVITYHALMVTCV 413
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I ACG G E A+++L+ M G+SP+V+ Y C + ++ K A +L +EM
Sbjct: 35 MVITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAV 94
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ P+++TY + + A ++ + + LA+ ++M
Sbjct: 95 GLTPDVITYSSAVDACAKG---EQWKGALALLKEM 126
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR-AIYEDLRSQNVTL 289
G D++S A DA K ++ ++ C G+ K A+ +++ +T
Sbjct: 246 VGLTPDVISYSSAIDACSKG-ATAQLFPCAK--------GEQWKGALALLKEMTVVGLTP 296
Query: 290 NIYVFNSLMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
N+ +++ + D K L + K M +G+ D+ + N + AC G A +
Sbjct: 297 NVVSYSAAIACAKGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWETALAL-- 354
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K + A G L V Y++ + A W+ + + E+M GV P+ IT+ +L+ C
Sbjct: 355 -LKEMAAVG-LTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHALMVTC 412
Query: 409 AN 410
N
Sbjct: 413 VN 414
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 183/410 (44%), Gaps = 58/410 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ ++ V LR ++ +P++ I CG G + S + +++ + V N
Sbjct: 299 GRWKEAVEVLRQMESQG---VTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNT 355
Query: 292 YVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FNS + ++ +E+ + + LG+ D S+N + AC +G A E+
Sbjct: 356 IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALEL--- 412
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K + AK LK D +Y++ ++ W+MAL+++ M + G+TPN I+ + I AC
Sbjct: 413 LKEMPAK-RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G ++ + L +M G PN N ++ C + Q+++A
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL---------------- 515
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
D ++ M K + P + TYN + AC
Sbjct: 516 -------DLLAKM------------------------KELAMTPDSITYNSAIAACSKRG 544
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ AL+ EM GL+P+ IS+T IDA G +G E A+++L+ M G++P+V+ Y
Sbjct: 545 RWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYN 604
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ IK C R ++A L +E+K + P+L++Y + A + G E
Sbjct: 605 SVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA 654
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 20/389 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN++ + I+ CG + + ++ ++ + V + +NS + ++ +
Sbjct: 177 SPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIG 236
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M +G+ D +YN ++ C G +E + + AKG L + +Y+ +
Sbjct: 237 LLREMPSVGLTPDAITYNSVITGC---GKEGQWKEALSVLTEMSAKG-LTPETISYNMAI 292
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W+ A++V M S GVTP+ I++ + I AC G E ++ L +EM G
Sbjct: 293 RACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVA 352
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ N + AC + Q+++A L R T + L D I+ +
Sbjct: 353 PNTIHFNSAIVACGKGGQWEKAVELLR----EVTALGLTPDATSFNSAIA--------AC 400
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNH 548
T + + KP +YN ++AC + L +M T GL+PN
Sbjct: 401 TKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS I I ACG G + L++L+ M G++P+V+ Y +AIK C + + ++A L +
Sbjct: 461 ISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAK 520
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEV 637
MK + P+ +TY + + A S+ G E
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEA 549
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 171/392 (43%), Gaps = 20/392 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P+ + I CG G + + + ++ S +T + +NS++ + K L V
Sbjct: 213 PDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSV 272
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + SYN+ ++AC +G A E+ ++ +E++GV DV +Y +K
Sbjct: 273 LTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEV---LRQMESQGVTP-DVISYDAAIK 328
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
W+ ++ + ++M GV PNTI ++S I AC G E+A+ L E+ G P
Sbjct: 329 ACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTP 388
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ N + AC ++ ++ A L + + + D IS +
Sbjct: 389 DATSFNSAIAACTKSGRWKEALELLKEMPAKRLK----------PDAISYNSAIEACGKG 438
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
K P + NI ++AC + L+ +M GL+PN I
Sbjct: 439 GQWEMALELRRQMPTK--GLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVI 496
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ I CG G E AL +L M+E M+PD + Y +AI C + R K+A +L EM
Sbjct: 497 TYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREM 556
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ P++++Y + A + G + L
Sbjct: 557 PGQGLTPDVISYTAAIDAYGKNGQWERAVELL 588
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 33/387 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I CG G + K+ + ++ + +T + FNS + + K LE
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M + D SYN ++AC G +A E+ + + KG L +V + + +
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELR---RQMPTKG-LTPNVISSNIAI 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + WQ L++ M + G+TPN IT++S I C G E+A+ L +M +
Sbjct: 468 RACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMT 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
P+S N + AC + ++ A L R +S T +G +R +
Sbjct: 528 PDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVEL 587
Query: 483 EHKDKQSITNTPNFVP-----------NSHYSSFD-----KRFSFKPTTTTYNILMKACC 526
+ + TPN + + D K + P +YN+ + AC
Sbjct: 588 -LRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACG 646
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+AL + EM GL+P+ IS+T I AC G E AL +L +M G+SP
Sbjct: 647 KRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTAT 706
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+Y+ AI+ C + R ++A L EM
Sbjct: 707 SYSLAIEACGKGGRREEAVCLVREMAQ 733
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 194/467 (41%), Gaps = 93/467 (19%)
Query: 118 SGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGL 177
S IV + G+ + V +L+++ LG+ P D + F C + SG +
Sbjct: 360 SAIVACGKGGQWEKAVELLREVTALGLTP----DATSFNSAIAACTK---SGR---WKEA 409
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+E+L+E +P K L KPD AI Y + I C G + ++
Sbjct: 410 LELLKE--MPAKRL------------KPD---AISY-----NSAIEACGK----GGQWEM 443
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
LR +K +PN+ I CG G + + + + +Q +T N+ +NS
Sbjct: 444 ALELRRQMPTKGL--TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501
Query: 298 MNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ ++ L++ M++L + D +YN + AC G +E ++ +
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW---KEAVALLREMPG 558
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G L DV +Y+ + + W+ A+++ M + G+TPN IT++S+I AC G E
Sbjct: 559 QG-LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWE 617
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A+ L +E+ + P+ N+ + AC + +++ A L R
Sbjct: 618 KALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE----------------- 660
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
+P P +Y ++AC + + +
Sbjct: 661 ---------------------MPAE---------GLTPDVISYTSAIRACNAEGEWEKAL 690
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
L+N M G+SP S+++ I+ACG G E A+ +++ M + G+S
Sbjct: 691 GLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLS 737
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 141/338 (41%), Gaps = 53/338 (15%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ L + M++ GV+ SY + C G A E+ E+ E + +VF
Sbjct: 127 REALGILDEMKEGGVVCAH-SYTTAITTCGRQGQWEKALELLREIPEQEG---VSPNVFC 182
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++ ++ W++A+ + +M V P+ I+++S I AC G E+ + L EM
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMP 242
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P++ N ++ C + Q+ A + ++ M K
Sbjct: 243 SVGLTPDAITYNSVITGCGKEGQWKEALSV-----------------------LTEMSAK 279
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
P T +YN+ ++AC + ++ +M + G
Sbjct: 280 ------------------------GLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQG 315
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ IS+ I ACGG G E ++ +L M G++P+ + + +AI C + + ++A
Sbjct: 316 VTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAV 375
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L E+ + P+ ++ + + A ++ G E + L
Sbjct: 376 ELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 52/308 (16%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-KEDMLSAGVT 395
A T +E G + ++ GV+ +Y+T + W+ AL++ +E GV+
Sbjct: 120 AATTGKWREALGILDEMKEGGVVC--AHSYTTAITTCGRQGQWEKALELLREIPEQEGVS 177
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN ++S I AC + E A+ L EM P+ N ++AC Q++R L
Sbjct: 178 PNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGL 237
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R + S+ TP+ +
Sbjct: 238 LR----------------------------EMPSVGLTPDAI------------------ 251
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN ++ C + +AL + EM GL+P IS+ + I ACG SG + A+++L+
Sbjct: 252 -TYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQ 310
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G++PDV++Y AIK C + + + L +EM + PN + + + + A + G
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370
Query: 634 LHEVQQCL 641
+ + L
Sbjct: 371 WEKAVELL 378
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 187/413 (45%), Gaps = 35/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ + I CG G + ++ ++ED+R+ V ++ + S + N K +
Sbjct: 170 APDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVS 229
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + + +G+ ++ SY+ ++ AC G +A ++ E+K + L ++ TY+ +
Sbjct: 230 LLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMR----LAPNIITYNAAI 285
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A W+ A+ + +M + G+ P+ +++SS+I+AC+ ++A+ + EM G
Sbjct: 286 DACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLS 345
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW-TLSKTQVALGEDYDGNTDRISNMEHKD--- 486
PN+ N + AC + Q+ A L R T TQ +G Y+ + E
Sbjct: 346 PNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIG--YNSAIAACAKGEQWKEAL 403
Query: 487 ---KQSITNTPNFVPNSHYSSFDK------------------RFSFKPTTTTYNILMKAC 525
++ T + S+ S+ D P YN + AC
Sbjct: 404 ALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDAC 463
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L+ EM TVGLSP+ S++ I AC + AL +LK M G++PD+
Sbjct: 464 GRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDL 523
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ Y +AI C + R K A +L EM+ + PN+++Y + + A R G E
Sbjct: 524 ICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKE 576
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 198/438 (45%), Gaps = 33/438 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + + G+ AL ++ + +P++ + I C G + ++ ++
Sbjct: 174 ISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRK 233
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +T N+ ++S++ A + K L++ + M+ + + ++ +YN + AC G
Sbjct: 234 IPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGR 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+ + L DV +YS+++ + W+ A+ + +M + G++PN I
Sbjct: 294 WKEAIDLLREMPTVG----LPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAI 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++S I+ACA G ++A L EM AG N + AC + Q+ A L R
Sbjct: 350 SYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREM 409
Query: 460 TLSKTQVALGEDYDGNTDRIS--NMEHKDKQSITN--TPNFVPNS--HYSSFD------- 506
+ Y D N+ K K+ + T PN + S+ D
Sbjct: 410 PTVGLHTTV-FSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQ 468
Query: 507 -----------KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
P +Y+ + AC + A++ EM GL+P+ I +
Sbjct: 469 WEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNS 528
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
IDAC G + A+ +L MR G++P++++Y++AI CVR + K+ +L EEM+
Sbjct: 529 AIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSG 588
Query: 614 IQPNLVTYITLLRARSRY 631
+ P+++TY L+ ++Y
Sbjct: 589 VVPDVITYHALMVTCAKY 606
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 204/510 (40%), Gaps = 109/510 (21%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY---------MK 274
+C + G+ A+R ++P++ +ID C G + M
Sbjct: 36 YCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMP 95
Query: 275 SRAIYEDLRS--------------------------QNVTLNIYVFNSLMN--VNAHDLK 306
++ I D RS ++VT N+ ++NS +N A +
Sbjct: 96 TKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWE 155
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + K M +G+ D+ SY+ + AC G A E++ + + GV DV TY
Sbjct: 156 IAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELF---EDMRTSGVAP-DVITY 211
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A+ W+ A+ + + + G+TPN I++SS+I ACA G + A+ L EM
Sbjct: 212 GSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKA 271
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNME 483
PN N + AC + ++ A L R V L D Y D S +
Sbjct: 272 MRLAPNIITYNAAIDACAKGGRWKEAIDLLR----EMPTVGLPPDVVSYSSVIDACSKGD 327
Query: 484 H--------KDKQSITNTPNFVP-NSHYSSFDKRFSFK---------PTTTT------YN 519
++ ++ +PN + NS + K +K PT YN
Sbjct: 328 RWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYN 387
Query: 520 ILMKACCTD-------------------------------------YYRVKALMNEMRTV 542
+ AC + + K L+ EM TV
Sbjct: 388 SAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATV 447
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL+PN + + IDACG E A+ +L+ M G+SPDV +Y++AI C + + K+A
Sbjct: 448 GLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEA 507
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++ +EM + P+L+ Y + + A S+ G
Sbjct: 508 LAVLKEMSAAGLAPDLICYNSAIDACSKGG 537
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 185/417 (44%), Gaps = 62/417 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRT----IIDVCGICGDYMKSRAIYEDLRSQNVT 288
+ D ALRA D KK P I + I CG G + ++ + ++ ++
Sbjct: 9 RSGDWRKALRAVDGMKKL---PGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAA 65
Query: 289 LNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ ++++++ A ++ + V+ M G+ D SY + AC G +A ++
Sbjct: 66 PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ + A+ V +V Y++ + A A W++A+ + ++M + G+ P+ I++SS I+
Sbjct: 126 ---LREMLARDVTP-NVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAIS 181
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AC G E+A+ LFE+M +G P+ + AC ++ A L R
Sbjct: 182 ACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRK-------- 233
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+P P +Y+ ++ AC
Sbjct: 234 ------------------------------IPT---------VGLTPNVISYSSVITACA 254
Query: 527 TD-YYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +++ L+ EM+ + L+PN I++ IDAC G + A+ +L+ M G+ PDVV
Sbjct: 255 KEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVV 314
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+Y++ I C + R K+A + EM + PN ++Y + + A ++ G E + L
Sbjct: 315 SYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLL 371
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + Y+ ++ AC A+ + EM T G++P+ S+ I+AC G + AL +
Sbjct: 66 PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M ++P+V+ Y +AI C ++ + + A SL +EM + P++++Y + + A R
Sbjct: 126 LREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR 185
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G E L +++DM +G
Sbjct: 186 GGRWEEA---LELFEDMRTSG 203
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 59/405 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
++RD AL DA L ++ I CG + ++ + +++++ + ++
Sbjct: 206 RRRDWTRALTVLDAP---LIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLV 262
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN+ M+ A LE++ ++ G ++ SYN + AC AG A E+ E+
Sbjct: 263 SFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREM 322
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACA 409
+ L ++ D +Y+T++ FA W+ AL++ +M A GV P+ I++++ ++ CA
Sbjct: 323 QGLS----VRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCA 378
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AG E+A L E L G +P+ N ++ AC A ++ +A LF +
Sbjct: 379 KAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLF----------GMM 428
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CT 527
E+ DR+S +N M AC
Sbjct: 429 EEVGVAPDRVS-------------------------------------FNTAMHACNRAL 451
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ ++ EM ++PN S+TI +DACG +G E AL++++ M G+ +V YT
Sbjct: 452 KWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYT 511
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A+ C R + + L EEM ++PN+V+Y + A +R G
Sbjct: 512 AAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVG 556
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ + + +KAC G +E G ++ ++A+G L+ D+ +++T + A + +A
Sbjct: 225 DVVGFTMAIKAC---GQARRWREALGVLREMQARG-LRPDLVSFNTAMDALGKAGQYDLA 280
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ ++ G PN +++++ I+AC AG+V++A L EM P+S N ++ A
Sbjct: 281 LELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAA 340
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ Q+ A L L++ + A G D D IS + + +
Sbjct: 341 FAKKNQWKAALEL-----LAEMKEAPGVD----PDLISY--NTAMHVCAKAGRWERATEL 389
Query: 503 SSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+ +P +YN +M AC +Y + L M VG++P+ +S+ + AC
Sbjct: 390 LTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNR 449
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+ + ALQIL+ M ++P+V +YT A+ C R+ ++A L EEM+ + N+ T
Sbjct: 450 ALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHT 509
Query: 621 YITLLRARSRYGSLHEV 637
Y + A R G++ V
Sbjct: 510 YTAAMDACCRGGAVDRV 526
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 169/417 (40%), Gaps = 86/417 (20%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ F + GK AL + + H +PN+ T I CG G
Sbjct: 258 RPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAG------- 310
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
M AH E+ + MQ L V D SYN ++ A
Sbjct: 311 --------------------MVDRAH------ELLREMQGLSVRPDSVSYNTVMAAFAKK 344
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A E+ E+K EA GV D+ +Y+T + V A A W+ A ++ + L G+ P+
Sbjct: 345 NQWKAALELLAEMK--EAPGV-DPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPD 401
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++++++++AC AG QA+ LF M + G P+ N + AC A ++ A ++ R
Sbjct: 402 VVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILR 461
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
ME + S P +
Sbjct: 462 -----------------------EMEAR------------------------SIAPNVKS 474
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y I + AC ++ R LM EM G+ N ++T +DAC G V+ L +L+ M
Sbjct: 475 YTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMD 534
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G+ P+VV+YT A+ R + +A ++ E+M ++ + V+Y T L R G
Sbjct: 535 GKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +T+ I ACG + AL +L+ M+ G+ PD+V++ TA+ ++ + A LF E
Sbjct: 227 VGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTE 286
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + PNLV+Y T + A R G + + L Q +
Sbjct: 287 IEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL 325
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 46/418 (11%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314
+++ T+I +C CG Y ++ A+ E++ ++NV+ NIY FN+L+ V + L +L K
Sbjct: 189 DVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKR 248
Query: 315 MQKL-------------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L G+ D+ +YN LL G +E Y + +E + V+
Sbjct: 249 QNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKW---KESYDILFEIEDQHVIT- 304
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV TYST++ FA + + +A+++ E M+ V PN IT++SLI AC A QA F
Sbjct: 305 DVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFF 364
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVAL------G 469
++M G PN + ++ +C + AF LF + T AL
Sbjct: 365 DDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHS 424
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------YSSFD--KRFSFKPTTT 516
+ ++ D + M+ Q N + H + D KR KP
Sbjct: 425 KQWEQAMDVLEWMQDAGIQ--LNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVI 482
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ L+ AC D R ++ M+ ++PN +++ +L+ C GN A Q++ ++
Sbjct: 483 MFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLL 542
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+E G ++ + T IK CVRS ++AF ++ +M+ +I+P+L T+ L A G
Sbjct: 543 QEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGG 600
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 179/394 (45%), Gaps = 37/394 (9%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I Y + +YE + + V N+ +NSL+ + A++ + +MQ
Sbjct: 311 TLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQ 370
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +Y+ ++ +C N V A +++ E+ E + D T+S ++ V +K
Sbjct: 371 GISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKE----IPPDPMTFSALLSVCQHSKQ 426
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A+ V E M AG+ N +S++++ C AG ++ A + +E + G +PN
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTA 486
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ AC A DRAFR+ + ED+ N+ + T V
Sbjct: 487 LIHACKVARDLDRAFRVLE---------LMKEDHVTPNLVTFNV-------LLGTCEVVG 530
Query: 499 NS----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
NS + + F+ T+N L+K C + KA + ++M+ + P+ ++
Sbjct: 531 NSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFN 590
Query: 553 ILIDACGGSGNVEGALQIL--------KIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L A G+ A+ ++ KI+ R G +P V AY + I CV+S ++AF
Sbjct: 591 ALSMAAEEGGDWRRAIDVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAF 650
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+++ MK ++ N+VTY ++ S L EV
Sbjct: 651 DVYKGMKTSGVRANIVTYNLIISILSGQRKLSEV 684
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASY 327
GD+ ++ AI + V +I +N++++ H D++ + K M++ V D+ S+
Sbjct: 100 GDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVFVMLKRMRE-KVSPDIVSF 158
Query: 328 NILLKAC---CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
N L AC C + V E+ E + ++ DVFT+ST++ + + A
Sbjct: 159 NTALAACQRQCDWESGVAILEMMSEDQ-------IERDVFTFSTLISLCDRCGKYDEAFA 211
Query: 385 VKEDMLSAGVTPNTITWSSLINACANA-----------GLVEQAMHLFEEMLQAGCEPNS 433
+KE+M + V+PN T+++LI C N+ + A LF E AG P+
Sbjct: 212 LKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDI 271
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N LL +E ++ ++ + ED TD I+ T
Sbjct: 272 VTYNSLLGVYMEMGKWKESYDILFEI----------EDQHVITDVITYS--------TLI 313
Query: 494 PNFVPNSHYS----SFDKRFSFK--PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
F YS ++K + P TYN L+ AC ++ + A ++M+ G+S
Sbjct: 314 STFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGIS 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++++ +I +C N A + M + PD + ++ + VC SK+ +QA +
Sbjct: 374 PNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDV 433
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E M+ IQ N+ Y ++ + G L + + L
Sbjct: 434 LEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRIL 469
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 175/454 (38%), Gaps = 99/454 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + F K R A+ Y+ + PN+ ++I C ++ ++ A ++D
Sbjct: 307 ITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDD 366
Query: 282 LRSQNVTLNI-----------------------------------YVFNSLMNVNAHDLK 306
+++Q ++ N+ F++L++V H +
Sbjct: 367 MQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQ 426
Query: 307 F--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++V + MQ G+ ++ Y+ ++ C AG A I E K + +K +V
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECK----RDGIKPNVI 482
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ ++ A+ A +V E M VTPN +T++ L+ C G A + +
Sbjct: 483 MFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLL 542
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ G N Q N L++ CV + ++ +AF ++ L +
Sbjct: 543 QEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQR--------------------- 581
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT- 541
+P+ +T+N L A D+ R +M +MR
Sbjct: 582 --------------------------IRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIK 615
Query: 542 --------VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
G +P+ ++ LI AC S N + A + K M+ G+ ++V Y I +
Sbjct: 616 TEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISIL 675
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L + + EMK ++ P+ T ++ A
Sbjct: 676 SGQRKLSEVLKVINEMKQEEVTPDSETIALMIDA 709
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 24/262 (9%)
Query: 191 LDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
LD+ FRI+ C KP+V I+F + RDL A R +
Sbjct: 462 LDDAFRILDECKRDGIKPNV--------------IMFTALIHACKVARDLDRAFRVLELM 507
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
K+ +PN+ ++ C + G+ + + L+ N+ FN+L+ V +H+
Sbjct: 508 KEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEW 567
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL---- 361
+ EVY MQ + ++++N L A G+ A ++ +++ K ++++
Sbjct: 568 QKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIKTEKILIRMAGHT 627
Query: 362 -DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V Y++++ + +Q A V + M ++GV N +T++ +I+ + + + + +
Sbjct: 628 PSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISILSGQRKLSEVLKV 687
Query: 421 FEEMLQAGCEPNSQCCNILLQA 442
EM Q P+S+ +++ A
Sbjct: 688 INEMKQEEVTPDSETIALMIDA 709
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/315 (18%), Positives = 124/315 (39%), Gaps = 47/315 (14%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+KL ++ ++ W+ A+ + M GV P+ ++++++++A ++ ++
Sbjct: 82 IKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVF 141
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ + M + P+ N L AC C ++ + +S+ Q+
Sbjct: 142 VMLKRM-REKVSPDIVSFNTALAACQRQCDWESGVAILE--MMSEDQI------------ 186
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKACCTDY 529
++ T + +D+ F+ K P T+N L+ C
Sbjct: 187 -------ERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSL 239
Query: 530 YR-------------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ L E + GL P+ +++ L+ G + + IL + +
Sbjct: 240 ATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIED 299
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ DV+ Y+T I ++++ A ++E+M Q+ PN++TY +L+ A R +
Sbjct: 300 QHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNF-- 357
Query: 637 VQQCLAVYQDMWKAG 651
Q A + DM G
Sbjct: 358 -SQAFAFFDDMQAQG 371
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 48/540 (8%)
Query: 97 VVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFK 156
V+ S G + ++L EMVA G + +R + ++ + N+ G A FD
Sbjct: 4 VLASWGILDPLETLLK-EMVAEG--RPLRPNTLVKLITAYGRGNKSGDA----FD----- 51
Query: 157 LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACI 216
L N+ + S V F L+++L EF +L K ++ C
Sbjct: 52 -LFNQAESFACSPTVHAFTKLIDILVN--------SGEFERAELVYKK-----LVQKGCQ 97
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+ R + +R FG+ L SA+ + K S P+ Y +++ G G ++R
Sbjct: 98 LDR--FAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ + + +T NI +N LM+ L L ++ M++ G + +YNILL A
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG A++++ H D +TYST+V + + A KV +M+ GV
Sbjct: 216 CSAGRVGAARKLF----HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + ++SL+ A AG +++ L +EM + G P++ N ++ A +A + D A
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F S + L Y+ D + Q+ V F P
Sbjct: 332 VFARMVESGCKPDL-ISYNILIDSYARFGDA-AQARQMLEEMVEAG----------FIPE 379
Query: 515 TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TYN L+ TD A++ EM T G P+ +++ L+D G G + A ++ +
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ G+ PD ++Y I RL +A LF++MK + Y L+RA R G
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 197/439 (44%), Gaps = 37/439 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ +G+ A ++ ++ SP ++ +ID+ G++ ++ +Y+ L
Sbjct: 33 LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV 92
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ L+ + +N L+ + L +E+++ M+ G D +Y L+ A AG
Sbjct: 93 QKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQ 152
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + LE +G L ++ TY+ ++ F MAL + +M G P+ +T+
Sbjct: 153 EARSFFDAM--LE-RG-LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY 208
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L++A +AG V A LF +M GC P+S + L+ ++ + + A ++FR
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268
Query: 462 SKTQVALGEDYD---------GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
V L +Y+ GN DR+ + + + F P++ FSF
Sbjct: 269 RGVAVDL-VNYNSLLATLAKAGNMDRVWKLMKE-----MSRKGFHPDA--------FSF- 313
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T + L KA D R + M G P+ IS+ ILID+ G+ A Q+L+
Sbjct: 314 --NTIMDALGKANKPDAAR--EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G P+ Y + I ++ +AF++ EEM+ +P++VTY L+ + G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429
Query: 633 SLHEVQQCLAVYQDMWKAG 651
E Q+ ++Q M G
Sbjct: 430 ---ENQRAARLFQQMKDKG 445
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 180/404 (44%), Gaps = 56/404 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL ++ ++K N+Y ++ G G ++ +++ ++ N+ +N++++
Sbjct: 218 ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 277
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DLK L++++ MQK GV D ++N L+ C +Q ++ E ++ +
Sbjct: 278 ACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAE---MQRR 334
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D+FTY+T++ ++A + M ++PN +T+S++I+ G E+
Sbjct: 335 GI-EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEE 393
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ +M ++G P+ N L+ + +FD A +
Sbjct: 394 AIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACK------------------- 434
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ME R K TYN L+ A Y
Sbjct: 435 ----DME------------------------RVGLKADVVTYNALIDAYGKQGKYKDAAG 466
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M+ GL PN ++++ LIDA +G + A I + G+ PDVV Y++ I C
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A L +EM IQPN+VTY +L+ A R G + V+
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVE 570
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 199/426 (46%), Gaps = 30/426 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ V +G+ AL+ + A KK PN+ TIID CG G D K+ I+E++
Sbjct: 237 YSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEM 296
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + V + FNSL+ V + + + V+ MQ+ G+ D+ +YN L+ A C G
Sbjct: 297 QKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQM 356
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA I ++ + +V TYST++ + ++ A+ + DM +GV P+ ++
Sbjct: 357 ELAASIMSSMRLKN----ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVS 412
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LI+ A G + A+ ++M + G + + N L+ A + ++ A LF
Sbjct: 413 YNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDK-M 471
Query: 461 LSKTQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ V Y D S H+D SI + F KR KP Y+
Sbjct: 472 KAEGLVPNVLTYSALIDAYSKAGMHQDATSI-----------FVEF-KRAGLKPDVVLYS 519
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE------GALQIL 571
L+ +CC A L+ EM G+ PN +++ LIDA G +G V+ G + I
Sbjct: 520 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPIN 579
Query: 572 KIMREDGMSPDVVAYT-TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ S +++ T T+ + + A S+F EM+ + ++PN+VT+ +L A SR
Sbjct: 580 VFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSR 639
Query: 631 YGSLHE 636
SL E
Sbjct: 640 CSSLQE 645
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 52/404 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN+ T+ID G G + ++ +Y D++ V + +N+L+++ A +F L
Sbjct: 372 SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALT 431
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+M+++G+ AD+ +YN L+ A G A ++ ++K A+G++ +V TYS ++
Sbjct: 432 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMK---AEGLVP-NVLTYSALI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A Q A + + AG+ P+ + +SSLI++C GLVE A+ L +EM QAG +
Sbjct: 488 DAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ A G ++ N+E
Sbjct: 548 PNIVTYNSLIDAY------------------------------GRNGQVDNVEAAKGNMP 577
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
N N V + K + + + ++ A ++ +EM+ GL PN ++
Sbjct: 578 INVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAV--------SVFHEMQQFGLKPNVVT 629
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ +++AC +++ A +L+ MR V + + +R +A LF+E+
Sbjct: 630 FSAILNACSRCSSLQEASVLLEQMRF--FDSWVYGIAHGLLMGLREHVWVEAQRLFDEIA 687
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA------VYQDMW 648
Y L +G Q+ + V+++ W
Sbjct: 688 RMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAW 731
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 28/298 (9%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHL 420
+V+ YS +V + + + ALKV + M AG PN IT++++I+AC G+ +++A+ +
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDI 292
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTD 477
FEEM + G EP+ N L+ C ++ + R+F + + +D Y+ D
Sbjct: 293 FEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVF----AEMQRRGIEQDIFTYNTLID 348
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVK 533
+ + + + + N P TY+ ++ K C +
Sbjct: 349 AVCKGGQMELAASIMSSMRLKN-----------ISPNVVTYSTMIDGYGKLGC--FEEAI 395
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L ++M+ G+ P+ +S+ LID G + AL K M G+ DVV Y I
Sbjct: 396 GLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY 455
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + K A LF++MK + PN++TY L+ A S+ G +H Q +++ + +AG
Sbjct: 456 GKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAG-MH--QDATSIFVEFKRAG 510
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 70/345 (20%)
Query: 315 MQKLGVMADMASYNILLKACCLAGN-TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M K ADMA+ IL A ++GN T L E + + ++ L+ F Y +++
Sbjct: 123 MGKHSPEADMAAQEIL-SAPSMSGNSTALLLEKW-------SHQLVGLEDFPY--LLREL 172
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSL----INACANAGLVEQAMHLFEEMLQAGC 429
+ W+ AL+ E M+ G + WS L I+ G VE A+ +F +AG
Sbjct: 173 GNRGEWERALQGYEWMVQQGHLRSE--WSKLASIMISTLGRLGKVEIALDVFNRAQKAGF 230
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N + ++ A + + A ++F++
Sbjct: 231 GNNVYAYSAMVSAYGRSGRCREALKVFQAM------------------------------ 260
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC---TDYYRVKALMNEMRTVGLSP 546
K+ KP TYN ++ AC D + + EM+ G+ P
Sbjct: 261 -----------------KKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEP 303
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ LI C E + ++ M+ G+ D+ Y T I + +++ A S+
Sbjct: 304 DRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIM 363
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ I PN+VTY T++ YG L ++ + +Y DM ++G
Sbjct: 364 SSMRLKNISPNVVTYSTMIDG---YGKLGCFEEAIGLYHDMKESG 405
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 56/404 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL ++ ++K N+Y ++ G G ++ +++ ++ N+ +N++++
Sbjct: 219 ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 278
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DLK L+++ MQK GV D ++N L+ C G +Q ++ E ++ +
Sbjct: 279 ACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE---MQRR 335
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D+FT++T++ ++A + M ++PN +T+S++I+ G E+
Sbjct: 336 GI-EQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEE 394
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ +M ++G P+ N L+ + +FD A
Sbjct: 395 AISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL----------------------- 431
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ KD + R K TYN L+ A Y
Sbjct: 432 -----IACKDME-------------------RVGLKADVVTYNALIDAYGKQGKYKDAAC 467
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M+ GL PN ++++ LID+ +G + + + G+ PDVV Y++ I C
Sbjct: 468 LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCC 527
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A L +EM IQPN+VTY +L+ A RYG +++
Sbjct: 528 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 184/408 (45%), Gaps = 61/408 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SPN+ T+ID G G + ++ ++Y D++ V + +N+L+++ A +F L
Sbjct: 373 SPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALI 432
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+M+++G+ AD+ +YN L+ A G A ++ ++K +G++ +V TYS ++
Sbjct: 433 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMK---GEGLVP-NVLTYSALI 488
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A Q V + AG+ P+ + +SSLI++C GLVE A+ L +EM QAG +
Sbjct: 489 DSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 548
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ A + R G D++ ++
Sbjct: 549 PNIVTYNSLIDA------YGRY---------------------GQADKLEAVK------- 574
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPN 547
N PN V S + KP + N +D+ V A + +EM+ GL PN
Sbjct: 575 ANMPNSVQKIGERSME--VVRKPPPSQQN------ASDHTGVLAAVSVFHEMQQFGLKPN 626
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++++ +++AC +++ A +L+ MR DG V + + +R + +A LF
Sbjct: 627 VVTFSAILNACSRCASLQEASVLLEQMRFFDGW---VYGIAHGLLMGLREQVWVEAQRLF 683
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA------VYQDMW 648
+E+ Y L +G Q+ + V+++ W
Sbjct: 684 DEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAW 731
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 25/292 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHL 420
+V+ YS +V + + + ALKV + M AG PN IT++++I+AC G+ ++QA+ +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNT--D 477
F+EM + G EP+ N L+ C ++ + R+F + + +D + NT D
Sbjct: 294 FDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVF----AEMQRRGIEQDIFTFNTLID 349
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVK 533
+ + + T N P TY+ ++ K C +
Sbjct: 350 AVCKGGQMELAASIMTTMRGKN-----------ISPNVVTYSTMIDGYGKLGC--FEEAI 396
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L ++M+ G+ P+ +S+ LID G + AL K M G+ DVV Y I
Sbjct: 397 SLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAY 456
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ + K A LF++MK + PN++TY L+ + S+ G +V ++
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFK 508
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ N + G N +++ ++ A G SG AL++ + M++ G P+++ Y T I C
Sbjct: 222 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACG 281
Query: 595 RSK-RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ LKQA +F+EM+ ++P+ +T+ +L+ SR G + Q+ A Q
Sbjct: 282 KGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQ 333
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+I+I G G VE AL + ++ G +V AY+ + RS R ++A +F+ MK
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PNL+TY T++ A + G +++Q L ++ +M K G
Sbjct: 264 AGCKPNLITYNTIIDACGKGGV--DLKQALDIFDEMQKEG 301
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 200/456 (43%), Gaps = 46/456 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I C R++ + +L++++ A + P++ + I C + ++ +
Sbjct: 193 IAACGNARQWERAVELLASMAARG------TPPDVLTYSSAIAACAKVSRWKEAVGLLRS 246
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ Q V N+ V+++ ++ + +++ K M +G+ D+ +Y+ ++ AC G
Sbjct: 247 MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + E + KGV+ ++ TYS ++ A W+ A+ + +M GV P+ I
Sbjct: 307 WEPAFRLLME---MPTKGVVA-NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVI 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SS I+ACA G E+A+ L EM G PN+ I++ AC + ++ A L +
Sbjct: 363 TYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM 422
Query: 460 TLSKTQVALGEDYDGNTD---RISNMEH-----KDKQSITNTPNFVPNSHYSSFD----- 506
+ +Y D + S E ++ + TPN + S+ S+ D
Sbjct: 423 QAHGVPPDV-INYSAAIDACAQASRWEQALWLLREMPATGLTPNVI--SYNSAIDACAKT 479
Query: 507 -------------KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
P TY+ ++ +C +AL EM+ G++P+ +S
Sbjct: 480 GRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSC 539
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
I+AC G E AL +L M G+ PD ++Y TAI C + R K+ L EM
Sbjct: 540 NTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMST 599
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ P+ ++Y + A S G E L + +DM
Sbjct: 600 VGLTPDAISYRFAMSACSVDGLWKEA---LVLLRDM 632
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 190/427 (44%), Gaps = 26/427 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+RE + D AL D ++ P+ + I CG + ++ + + ++
Sbjct: 158 LREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGT 217
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ ++S + A K + + ++M+ GV ++ Y+ + AC G A +
Sbjct: 218 PPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVD 277
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ +K + A G L DV TYST++ A W+ A ++ +M + GV N IT+S +I
Sbjct: 278 L---LKEMPAVG-LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVI 333
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---S 462
ACA G E+A+ L EM + G P+ + + AC + Q++ A L R + +
Sbjct: 334 GACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVT 393
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ G R E D + VP P Y+ +
Sbjct: 394 PNAISYGIVISACAKRGRWREAIDLLQEMQA-HGVP--------------PDVINYSAAI 438
Query: 523 KAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC + + + L+ EM GL+PN IS+ IDAC +G + A+++L+ M G++
Sbjct: 439 DACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLA 498
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV+ Y+ I C ++ ++A LF EM+ I P++V+ T + A ++ G E
Sbjct: 499 PDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDV 558
Query: 641 LAVYQDM 647
L M
Sbjct: 559 LGEMPTM 565
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 44/401 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID C G + + + ++ ++ V NI ++ ++ A ++ +
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + MQ+ GV D+ +Y+ + AC G +E G ++ + +GV + +Y ++
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQW---EEAVGLLREMPMEGVTP-NAISYGIVI 403
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A W+ A+ + ++M + GV P+ I +S+ I+ACA A EQA+ L EM G
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
PN N + AC + + A L R +++ A+G ++ D
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDL 523
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
M+ +Q IT P + N + AC + +AL +
Sbjct: 524 FREMQ---RQGIT---------------------PDVVSCNTAINACAQGGWWEEALDVL 559
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM T+GL P+ IS+ IDAC + + +L+ M G++PD ++Y A+ C
Sbjct: 560 GEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVD 619
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
K+A L +M + P++VTY + + A ++ G E
Sbjct: 620 GLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEA 660
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 55/391 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN +I C G + ++ + +++++ V ++ +++ ++ A ++ L
Sbjct: 393 TPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALW 452
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M G+ ++ SYN + AC G + +A E+ ++ + A G L DV TYS ++
Sbjct: 453 LLREMPATGLTPNVISYNSAIDACAKTGRSKIAVEL---LREMPAHG-LAPDVITYSAVI 508
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + W+ AL + +M G+TP+ ++ ++ INACA G E+A+ + EM G
Sbjct: 509 ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ + AC + ++ L R + ++
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLR----------------------------EMSTV 600
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
TP+ + +Y M AC D + L+ +M VGLSP+
Sbjct: 601 GLTPDAI-------------------SYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDV 641
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ I+AC G + A +L+ M G++PDV ++ AI C + A + E
Sbjct: 642 VTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFE 701
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
M+ + PN TY+T + A R G + Q
Sbjct: 702 MRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F++ V M KLG+ D ++N L+ C G A
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ E+ K + +V +Y+T++ MA+ V + M G PN +T+S++
Sbjct: 184 ELFNEM----VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI 239
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM EM++ G PN N ++ Q + A RLF+
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM----- 294
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G D NT + + + K+ + + V + + ++ +P +TYN LM
Sbjct: 295 ---VGRDVMPNTVTFTILVDGLCKEGMVSEARLV----FETMTEK-GVEPDISTYNALM- 345
Query: 524 ACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
D Y ++ LMNE + V G +P S+ ILI+ S ++ A +L M
Sbjct: 346 ----DGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++PD V Y+T ++ + R K+A +LF+EM Y PNLVTY+ LL ++G L E
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 637 VQQCL 641
+ L
Sbjct: 462 ALKLL 466
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 200/452 (44%), Gaps = 38/452 (8%)
Query: 212 RYACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
R I PR ++ F F+ F KK+ + + + + N+Y +I+
Sbjct: 83 RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
S ++ + + + FN+L+N N +K +E++ M K G ++ SY
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ C GNT +A +++ K +E G K +V TYSTI+ + A++ +
Sbjct: 203 TVINGLCKTGNTSMAVDVF---KKMEQNGC-KPNVVTYSTIIDSLCKDRLVNDAMEFLSE 258
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ G+ PN T++S+++ N G + +A LF+EM+ PN+ IL+ +
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTPNFVPNSHYS 503
A +F + T + + Y+ D R+ N E K I P +H
Sbjct: 319 VSEARLVFETMTEKGVEPDIST-YNALMDGYCLQRLMN-EAKKVFEIMIRKGCAPGAHSY 376
Query: 504 SF-------DKRF-------------SFKPTTTTYNILMKACCTDYYRVKALMN---EMR 540
+ +R + P T TY+ LM+ C R K +N EM
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC-QLGRPKEALNLFKEMC 435
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ G PN +++ IL+D G+++ AL++LK M+E + P++V YT I+ + +L+
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE 495
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A LF ++ +P++ TY +++ + G
Sbjct: 496 VAKELFSKLFGDGTRPDIRTYTVMIKGLLKEG 527
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 52/327 (15%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V++ + ++ ++ V M G+ P+ IT+++LIN N G +++A+ LF
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM++ G EPN ++ + A +F+ + + + Y D +
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNV-VTYSTIIDSLC- 244
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
KD+ + + F+ S +R P TYN ++ C L EM
Sbjct: 245 ---KDRL-VNDAMEFL-----SEMVER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI--------- 590
+ PN +++TIL+D G V A + + M E G+ PD+ Y +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354
Query: 591 ------------KVCV--------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
K C +S+R+ +A SL EM H + P+ VTY TL
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + G ++ L ++++M G
Sbjct: 415 MQGLCQLG---RPKEALNLFKEMCSYG 438
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++K M G ++ +Y ILL C G+ A ++ +K E K L+ ++
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK--EKK--LEPNIVH 480
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +++ A ++A ++ + G P+ T++ +I GL ++A LF +M
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G PNS N+++Q ++ A RL + V L
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y V +L N+M ++ N S ILI+ +V+ ++ +L M + G+ PD + +
Sbjct: 109 YSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNA 168
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++K+A LF EM +PN+++Y T++ + G+ + V++ M
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN---TSMAVDVFKKME 225
Query: 649 KAG 651
+ G
Sbjct: 226 QNG 228
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 56/422 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R +L CN + + K + + +D H P++Y +I G+ ++
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ + + N+ +N ++ A L +E+ ++M G++ D+ +Y+IL+ C
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ + A+ + E+ + LK + TY+ ++ F + A ++K++M++ G+
Sbjct: 297 MEKRSREAKLMLLEMIDVG----LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 352
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N I W++L+N AG +E+A+ + +EM++ G EP+SQ ++L++ RAF L
Sbjct: 353 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
K+ PT
Sbjct: 413 LDEM-----------------------------------------------KKRKLAPTV 425
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY++++ C + A++ EM GL PN + +T L+ A G VE + IL+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MRE G+ PDV Y + I ++KR+++A + EM +++PN TY + S+ G
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 634 LH 635
+
Sbjct: 546 ME 547
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 179/421 (42%), Gaps = 37/421 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ +++ A D KK +P + II+ CG+ + AI ++ + N
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 461
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+ +LM +A + ++ + + + M++ G++ D+ YN L+ C A A+ E+
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LE + L+ + TY + ++ A ++A + +MLS GV PN +++LI
Sbjct: 522 --LERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLS 462
G V +A +F +L + Q ++L+ + AF +F +
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ G GN D+ S + ++ I P TYNIL+
Sbjct: 638 YNSLISGSCKQGNVDKASQL--LEEMCIK------------------GINPDIVTYNILI 677
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + R K L +++ GL+PN +++ ++D S N A Q+L+ M G+
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 737
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD Y + C + ++ ++A LF+EM + V++ TL+ + G L E
Sbjct: 738 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHL 796
Query: 641 L 641
L
Sbjct: 797 L 797
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 185/416 (44%), Gaps = 60/416 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
F+ + K ++ A R ++ PN+ I +I+ G C G+ ++ +++ + S
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCKEGNVTEAFSVFRFILS 593
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ ++ L++ + + K ++ +Q+ G++ + +YN L+ C GN
Sbjct: 594 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 653
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ + KG+ D+ TY+ ++ A + A + +D+ G+TPN +T++
Sbjct: 654 ASQL---LEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++++ + A L EEML G P++ N++L C + +F++A LF+
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM--- 766
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+K F+ +T ++N L+
Sbjct: 767 ------------------------------------------LEKGFA---STVSFNTLI 781
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ C +A L+ EM PNH+++T LID +G + A ++ M+E +
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
P YT+ + + + +LFEEM I+P+ +TY ++ A R G++ E
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 55/298 (18%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV + M + V P+ T++++I+A G V+ A + EM + GC PN N+++
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A D A L RS + K V YD + ME + +++ +
Sbjct: 261 CRARLLDEAIELKRS-MVDKGLVPDLYTYDILINGFC-MEKRSREAKLMLLEMID----- 313
Query: 504 SFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
KP TYN L+ + +R+K +EM G+ N I W L++
Sbjct: 314 -----VGLKPEPITYNALIDGFMRQGDIEQAFRIK---DEMVACGIEANLIIWNTLLNGV 365
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI---- 614
+G +E AL+I++ M E G+ PD Y+ I+ R + + +AF L +EMK ++
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 425
Query: 615 -------------------------------QPNLVTYITLLRARSRYGSLHEVQQCL 641
+PN V Y TL+ A ++ G + E + L
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQ 569
P TYN+++ C +A L M GL P+ ++ ILI+ C + E L
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L+ M + G+ P+ + Y I +R ++QAF + +EM I+ NL+ + TLL
Sbjct: 308 LLE-MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVC 366
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G + ++ L + Q+M + G
Sbjct: 367 KAGKM---EKALEIMQEMMEKG 385
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 502 YSSFDKRFSFK--PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ FD + K P TY ++ A C + K ++ EM G SPN +++ ++I
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++ A+++ + M + G+ PD+ Y I KR ++A + EM ++P
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+TY L+ R G +++Q + +M G
Sbjct: 320 PITYNALIDGFMRQG---DIEQAFRIKDEMVACG 350
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 16/229 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMA 322
G C G ++ + E++ + N + SL+ N A + ++ MQ+ VM
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+Y LL GN E+ + + AKG+ + D TY ++ + A
Sbjct: 843 TAKTYTSLLHGYHNIGNM---SEVSALFEEMVAKGI-EPDKMTYYVMIDAYCREGNVMEA 898
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+K+++L G+ + + +LI A + + L E+ ++G C+++ +
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958
Query: 443 CVEACQFDRAFRLFRS-----WTLSKTQVALGEDYDGNTDRISNMEHKD 486
A D A + RS W + T +LG+ DGN + +N E D
Sbjct: 959 FQIAGNMDEAAEVLRSMVKFGWVSNTT--SLGDLVDGNQNG-ANSEDSD 1004
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 58/403 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP +I++ G MK+ +++++Q +TLN ++ L++ V D
Sbjct: 298 SPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFS 357
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M + G+ D +YNILLKA C + A ++ G +K ++ TY TI+
Sbjct: 358 VFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQ----TYITII 413
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +MA K +M AG PN T++ +++ G +++A + +EM AG +
Sbjct: 414 DGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQ 473
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L+Q + AF+ + R++ +
Sbjct: 474 PNFRSYTTLMQGFASIGEIGLAFKCLK--------------------RVNEITQ------ 507
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
KP +Y L+KACC A+ EM G+ N+
Sbjct: 508 ---------------------KPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNN 546
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ L+D G++ A I++ MR++G +PD+ +YT+ + C ++ +++A EE
Sbjct: 547 YIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEE 606
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
MK +QPNL TY L+ + S+ ++ L Y +M AG
Sbjct: 607 MKQQDLQPNLQTYTILIHG---WTSVSHPEKALICYDEMKAAG 646
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 169/389 (43%), Gaps = 27/389 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+I G GD +R +E +R+ + +++ +N+L+ + A +L+ + + M+ G
Sbjct: 129 LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEG 188
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + A+++ ++ +GN A++ + +V YS+I+ + A
Sbjct: 189 IFPNAATFSAIISGYGSSGNVEAAEKWF----QRSVSENWNHNVAIYSSIIHAYCKAGNM 244
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM---LQAGCEPNSQCC 436
+ A + DM G+ ++ L++ A + Q +++F ++ + G P +
Sbjct: 245 ERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTY 304
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ + + ++ ++ K A G + NT + + N
Sbjct: 305 GCLINL------YTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANA--- 355
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
+S F+ +P TYNIL+KA C +A L+ M+T G SP ++
Sbjct: 356 -----FSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYI 410
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID +G+V A + + M+ G P+ Y + V+ ++ +A S+ +EM+
Sbjct: 411 TIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELA 470
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+QPN +Y TL++ + G + +CL
Sbjct: 471 GVQPNFRSYTTLMQGFASIGEIGLAFKCL 499
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 179/430 (41%), Gaps = 51/430 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ N +R + ++L A+ + + PN II G G+ + ++
Sbjct: 161 YNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSV 220
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S+N N+ +++S+++ A +++ + +M++ G+ A + YNIL+
Sbjct: 221 SENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEA 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ ++K G L TY ++ ++ AL+ ++M + G+T N T+
Sbjct: 281 QCLNVFHKLKARIDTG-LSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTY 339
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S L++ G A +FE+M +AG EP+ NILL+A ++ Q RA +L
Sbjct: 340 SMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQL------ 393
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ M+ + T + + + D R ++K
Sbjct: 394 -----------------LGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYK--------- 427
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
++EM+ G PN ++ +++ G ++ A ++ M G+ P
Sbjct: 428 -------------TVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQP 474
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +YTT ++ + AF + + +P +++Y +LL+A + G + Q +
Sbjct: 475 NFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRM---QNAI 531
Query: 642 AVYQDMWKAG 651
AV ++M AG
Sbjct: 532 AVTEEMAFAG 541
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + F K D+ A + K PN I+ G ++ ++ +++
Sbjct: 409 YITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEME 468
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + +LM A ++ + K + ++ + SY LLKACC AG
Sbjct: 469 LAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQ 528
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
A + E+ A + ++ + ++T++ +A W+ A + + M G TP+ +
Sbjct: 529 NAIAVTEEM----AFAGVPMNNYIFNTLLDGWAQRGDMWE-AYGIMQKMRQEGFTPDIHS 583
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++S +NAC AG +++A EEM Q +PN Q IL+ ++A
Sbjct: 584 YTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKAL 636
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI G G+ GA + MR G+ V AY I+ + ++ L+ A S EEM+
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
I PN T+ ++ S YGS V+ +Q
Sbjct: 186 IEGIFPNAATFSAII---SGYGSSGNVEAAEKWFQ 217
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N YI T++D GD ++ I + +R + T +I+ + S +N A D++ E
Sbjct: 545 NNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETI 604
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M++ + ++ +Y IL+ + A Y E+K A G++ Y + +
Sbjct: 605 EEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMK---AAGLIPDKPLYYCIVTSL 661
Query: 373 FADA 376
+ A
Sbjct: 662 LSKA 665
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 29/428 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F K DL AL + S +I G CG +++ AI+E++R +
Sbjct: 280 FAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPR 339
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N+L+ V A LK V M++ GV + +Y+ L+ A AG A+ +
Sbjct: 340 TRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIV-- 397
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +EA V + + + +S I+ + D WQ + +V +M ++GV P+ + ++ +I+
Sbjct: 398 -LKEMEASNV-QPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTF 455
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSK 463
++ AM F+ ML G EP++ N L+ A + DRA LF ++
Sbjct: 456 GKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCN 515
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T + + G+ +R ++ K+ + + VPNS T T I +
Sbjct: 516 TTFNIMINSFGDQERWDDV--KNLLAHMRSQGLVPNS-------------VTYTTLIDIY 560
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ +++M+ GL P+ + LI+A G E A+ + MR DG+ P +
Sbjct: 561 GKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSL 620
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+A + I +R +AF++ + MK ++P++VTY TL++A R +V +V
Sbjct: 621 LALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVP---SV 677
Query: 644 YQDMWKAG 651
Y++M +G
Sbjct: 678 YEEMILSG 685
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 184/412 (44%), Gaps = 45/412 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L++ A +DL+ L + M++ G +D +Y+++
Sbjct: 180 QSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLI 239
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ ++ + Q++Y E++ + L+LDV + I+ FA A AL+
Sbjct: 240 IRSLMRKNRVDSAILQKLYREIECDK----LELDVQLSNDIIVGFAKAGDLSKALEFLGV 295
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ +G++ T T ++I A N G +A +FEEM G +P ++ N LL+ V+A
Sbjct: 296 VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 449 FDRAFRLFRSWTLSKTQVALGE-------DYDGNTDR-------ISNMEHKDKQSITNTP 494
A F + ++ V+ E D GN R + ME + Q
Sbjct: 356 LKDA--EFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVF 413
Query: 495 NFVPNSHYSSFDKRFSF-----------KPTTTTYNILM----KACCTDYYRVKALMNEM 539
+ + +S+ + + SF +P YN+++ K C D+ A + M
Sbjct: 414 SRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDH--AMATFDRM 471
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID +G + A ++ + M E G SP + I +R
Sbjct: 472 LSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERW 531
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L M+ + PN VTY TL+ + G ++ +CL DM AG
Sbjct: 532 DDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECL---DDMKAAG 580
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 104/262 (39%), Gaps = 42/262 (16%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D +F N + FGK L A+ +D P+ T+ID G + ++
Sbjct: 442 RPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEE 501
Query: 278 IYEDL-----------------------------------RSQNVTLNIYVFNSLMNVNA 302
++E++ RSQ + N + +L+++
Sbjct: 502 LFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYG 561
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+F +E +M+ G+ YN L+ A G L+++ + + G LK
Sbjct: 562 KSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG---LSEQAVSAFRAMRVDG-LK 617
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ ++++ F + + A V + M + P+ +T+++L+ A ++ +
Sbjct: 618 PSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSV 677
Query: 421 FEEMLQAGCEPNSQCCNILLQA 442
+EEM+ +GC P+ + +L A
Sbjct: 678 YEEMILSGCTPDRKARAMLRSA 699
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y+IL+ A +A + R L+P +++ LI AC + ++E AL ++ MR+D
Sbjct: 171 YSILIHALGQSEKLYEAFLLSQRQ-NLTP--LTYNALISACARNNDLEKALNLITRMRQD 227
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAF--SLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G D V Y+ I+ +R R+ A L+ E++ +++ ++ ++ ++ G L
Sbjct: 228 GYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLS 287
Query: 636 EVQQCLAVYQ 645
+ + L V Q
Sbjct: 288 KALEFLGVVQ 297
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 182/407 (44%), Gaps = 16/407 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN + I VCG CG ++ ++ +++ V L V++++ N +
Sbjct: 228 PNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAAST 287
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + V ++ +YN+ + C G +E + + G ++ DV TY+ +V
Sbjct: 288 LREIHDWPVKPNVFNYNLAICTCTDCGEW---EEALDLLHFMREVGGVEPDVVTYNIVVA 344
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + A+++ +M G+ P+ I++++ I+AC + GL E+A+ +F EM +AG P
Sbjct: 345 ACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRP 404
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ AC+ A Q++ A F G D + + +
Sbjct: 405 NIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTAL 464
Query: 492 NTPNFVPN-----SHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
+ S KR KP +YN ++ AC C + + AL+ EM GL
Sbjct: 465 SACEVGEQWGRALSLLRDMPKR-GVKPVVISYNTVISACGKCGEGDQALALLREMPERGL 523
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ I A SG + A+++++ M G++ D + Y++A+ + R +QA S
Sbjct: 524 MPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALS 583
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L EM+ + P ++ Y +RA G E L + ++M AG
Sbjct: 584 LLREMQGAGVSPTVICYTAAIRACGEAGKGDEA---LLLLREMPTAG 627
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 152/349 (43%), Gaps = 61/349 (17%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKAC--CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L + ++M K GV + SYN ++ AC C G+ LA ++ + +G++ DV T
Sbjct: 476 ALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALAL-----LREMPERGLMP-DVIT 529
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++ + +++ A+++ +M AGV + IT+SS + A+AG EQA+ L EM
Sbjct: 530 FNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQ 589
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG P C ++AC EA + D A L R +
Sbjct: 590 GAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGV--------------------- 628
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
TPN FS+ T + AC D + + AL+NEM +G
Sbjct: 629 -------TPNL------------FSYSAT-------ISACGKDGRWEQGLALLNEMPALG 662
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+PN +T I CG G E A+ + M G+ P VV YT+A+ + A
Sbjct: 663 LTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLAL 722
Query: 604 SLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L EMK I+PN TY ++ A G H V Q V +DM AG
Sbjct: 723 ELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQ---VQRDMASAG 768
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 154/353 (43%), Gaps = 19/353 (5%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T+I CG CG+ ++ A+ ++ + + ++ FNS + N+ + + + M +
Sbjct: 497 TVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRA 556
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV AD +Y+ L AG A + ++ ++ GV V Y+ ++ +A
Sbjct: 557 GVAADAITYSSALTGLAHAGRWEQALSL---LREMQGAGV-SPTVICYTAAIRACGEAGK 612
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M +AGVTPN ++S+ I+AC G EQ + L EM G PN C
Sbjct: 613 GDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTA 672
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ C Q++RA FRS S Q + G T +S + H + +
Sbjct: 673 AITGCGIGGQWERAVATFRSMIASGIQPTV----VGYTSAVSALAHCGEVDLA------- 721
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
S + +P TY ++ AC + V + +M + G++P + I
Sbjct: 722 LELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIR 781
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A G GN A +L M G+ P V Y AI C +S + ++A L +EM
Sbjct: 782 ASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEM 834
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 168/373 (45%), Gaps = 57/373 (15%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+ + RA + ++ ++ +V++ ++ A ++ L++ M +LG M + N
Sbjct: 104 ELAEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVN 163
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L AC AG QE G ++ A G+ +LDV +Y+ + W++AL + +
Sbjct: 164 AALDACGKAGRV---QEALGLMRDARASGI-ELDVVSYNCAIPACVTGGDWELALSMIRE 219
Query: 389 MLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M + G+ PN IT+ + I C G ++A L EM G + L+ V +
Sbjct: 220 MEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGG---------VPLKTSVYSA 270
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F+ AFR W + + L E +D
Sbjct: 271 VFN-AFRRVDHWQAAAST--LREIHD---------------------------------- 293
Query: 508 RFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV-GLSPNHISWTILIDACGGSGNV 564
+ KP YN+ + C C ++ L++ MR V G+ P+ +++ I++ ACG +G
Sbjct: 294 -WPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQG 352
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A++I + M E G+ PDV+++TTAI C ++A S+F EM+ ++PN++T+ +
Sbjct: 353 EKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAV 412
Query: 625 LRARSRYGSLHEV 637
+ A G E
Sbjct: 413 MSACIAAGQWEEA 425
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 177/457 (38%), Gaps = 80/457 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN Y +D CG G ++ + D R+ + L++ +N + V D + L +
Sbjct: 157 PNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSM 216
Query: 312 YKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ + G+ + +Y +K C G A + E+K G + L YS +
Sbjct: 217 IREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKD----GGVPLKTSVYSAVF 272
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGC 429
F WQ A ++ V PN ++ I C + G E+A+ L M + G
Sbjct: 273 NAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGV 332
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP+ NI++ AC +A Q ++A +FR ++V + D T IS
Sbjct: 333 EPDVVTYNIVVAACGKAGQGEKAIEIFR----EMSEVGIKPDVISFTTAISACGSCG--- 385
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCT--------DYY--------- 530
+ S F +R +P T+N +M AC D++
Sbjct: 386 -------LSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGA 438
Query: 531 ------------------------------------RVKALMNEMRTVGLSPNHISWTIL 554
R +L+ +M G+ P IS+ +
Sbjct: 439 ANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTV 498
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I ACG G + AL +L+ M E G+ PDV+ + +AI S R A L EM +
Sbjct: 499 ISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGV 558
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +TY + L + G +Q L++ ++M AG
Sbjct: 559 AADAITYSSALTGLAHAGRW---EQALSLLREMQGAG 592
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 5/206 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN++ I CG G + + A+ ++ + +T N + + + + ++ +
Sbjct: 629 TPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVA 688
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++M G+ + Y + A G LA E+ E+K E G+ + + TY+ ++
Sbjct: 689 TFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMK--EEAGI-EPNEQTYAAVI 745
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +V+ DM SAG+TP + S I A G +A L EM AG
Sbjct: 746 LACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVP 805
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF 456
P C N + AC ++ ++ A L
Sbjct: 806 PTVSCYNAAITACGKSGKWQEALDLL 831
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C + ++ M +G PN +DACG +G V+ AL +++ R G+ DVV+
Sbjct: 137 CFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVS 196
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y AI CV + A S+ EM+ Y I+PN +TY ++ R G E L
Sbjct: 197 YNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEM 256
Query: 645 QD 646
+D
Sbjct: 257 KD 258
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+PN + I CGI G + ++ A + + + + + + S ++ AH ++ LE
Sbjct: 664 TPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALE 723
Query: 311 VYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M ++ G+ + +Y ++ AC G L ++ + + + G+ + Y +
Sbjct: 724 LLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQ---RDMASAGITP-RLTGYLSA 779
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + W A + +M +AGV P +++ I AC +G ++A+ L +EM G
Sbjct: 780 IRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGL 839
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+S L A + ACQ +A R ++ L + + + + G D +
Sbjct: 840 VRDSG----TLSAAISACQ--KAGRGVKAAGLVEEMLEMAREKGGERDSLEG 885
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 201/468 (42%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D A+R ++ + +P +I G G ++ A++E++
Sbjct: 243 LMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEI 302
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK V M+K GV D +Y++L+ AG
Sbjct: 303 RENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRW 362
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA V + + + +S I+ + D WQ + +V +DM S+GV P+
Sbjct: 363 ESARIV---LKEMEASNV-QPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHF 418
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM FE ML G P+ N L+ ++ + D A LF
Sbjct: 419 YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELF---- 474
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S M+ + + P TTYNI
Sbjct: 475 -------------------SEMQQR------------------------GYSPCITTYNI 491
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
++ + + +V A +++M++ GL PN I++T L+D G SG A++ L++++
Sbjct: 492 MINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 551
Query: 577 ---------------------------------DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+G++P ++A + I +R +AF
Sbjct: 552 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAF 611
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK I+P++VTY TL++A R + + Q+ AVY++M +G
Sbjct: 612 AVLQYMKENNIEPDVVTYTTLMKALIR---VEKFQKVPAVYEEMVASG 656
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 42/404 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L+ A D++ L + M++ G D +Y+ +
Sbjct: 151 RSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 210
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ + ++ + Q++Y E++ +++D + I+ F+ A A++
Sbjct: 211 IQYLTRSNKIDSPILQKLYAEIE----TDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAM 266
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
S G+ P T ++I A N+G +A LFEE+ + G EP ++ N LL+ V
Sbjct: 267 AQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGS 326
Query: 449 FDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + K V E Y D ++ + I N PNS+
Sbjct: 327 LKDA--EFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVF 384
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ A M
Sbjct: 385 SRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDH--AMATFERM 442
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID SG + A ++ M++ G SP + Y I +R
Sbjct: 443 LSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRW 502
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+Q + +M+ +QPN +TY TL+ + G + +CL V
Sbjct: 503 EQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEV 546
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
SP + +I+ G + + A ++SQ + N + +L++V +F+ +E
Sbjct: 483 SPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIE 542
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++ G YN L+ A G + LA + + + +G L + ++++
Sbjct: 543 CLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF---RLMTTEG-LTPSLLALNSLI 598
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + + A V + M + P+ +T+++L+ A ++ ++EEM+ +GC
Sbjct: 599 NAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCT 658
Query: 431 PNSQCCNILLQA 442
P+ + +L A
Sbjct: 659 PDRKARAMLRSA 670
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 42/372 (11%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY M G+ ++ ++N ++K C G A+ I G + H A D FTY+++
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACP----DTFTYTSL 243
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A ++ + M+ G PN++T+S+LIN + G +E+AM + EEM+ G
Sbjct: 244 IIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGI 303
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
EP I + + +A + A +L + T + G DG +
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIG 363
Query: 482 MEHKDKQSITNTPNFVPNS-HYSSF------DKRFSFK-------------PTTTTYNIL 521
+ HK VP + YS+ + RF P T TYN++
Sbjct: 364 VYHK-----MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C+ Y + A+ ++M G SPN I++ I+I G + A+++L++M+ +G+
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D Y I R +L+ AFSLF EM + I PN+VTY ++ Y ++ +V
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING---YLTVAKVDD 535
Query: 640 CLAVYQDMWKAG 651
LA++ M ++G
Sbjct: 536 ALALFWKMVESG 547
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 176/423 (41%), Gaps = 41/423 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ KK PN+ +I G + + +Y + + + +++L+N
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ +F L +++ M + + +YN+++K C G A I+ ++ K
Sbjct: 386 QLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM----LKA 441
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+V TY+ I+ ++ + A+++ E M G+ +T T+++LI+ + G +E A
Sbjct: 442 GPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHA 501
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT-QVALGEDYD--- 473
LF EM++ G PN N ++ + + D A LF W + ++ V Y+
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF--WKMVESGNVPSSGTYNMMI 559
Query: 474 ---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
T+RIS E+ + + P TY + C +
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQ-----------------GLLPNVITYTSFIDGLCKNGR 602
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A + +EM+ PN +++ LID G E A ++L +DG P+V YTT
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTT 658
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ R +A L E MK +QP+ Y LL + + EV+ L ++ M
Sbjct: 659 LVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN---LEVESALKIFDSMV 715
Query: 649 KAG 651
G
Sbjct: 716 TTG 718
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 124/312 (39%), Gaps = 28/312 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G + +++ ++ ++ N+ +N+++N + + L ++ M + G + +Y
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+++ A+ G+ + +G+L +V TY++ + +A K+
Sbjct: 556 NMMISGFSKTNRISEAENFCGK---MVKQGLLP-NVITYTSFIDGLCKNGRTSLAFKIFH 611
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M PN T+SSLI+ G E A E +L GCEPN L++
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKG 667
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A +L S Q + E + N S FD
Sbjct: 668 RCYEADQLVESMKKKGLQ--------------PSEEIYRALLVGQCKNLEVESALKIFDS 713
Query: 508 RFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F+P + Y L+ A C +R KA + M + + + WT+L+D G
Sbjct: 714 MVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE 773
Query: 564 VEGALQILKIMR 575
+ +L++L +M
Sbjct: 774 TDLSLELLHVME 785
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 182/386 (47%), Gaps = 33/386 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++ + S V N+Y +N L+ H K L V ++M+ G + +YN L+
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR-KEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+ + ++ +G LK ++ T++++V A + A KV ++M+
Sbjct: 200 AAFCRAGEVDRAERLVDMMR----EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK 255
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +++++L+ G +A+ +F EM + G P+ L+ +A +R
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 452 AF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R R L ++ DG + F+ ++ + + R
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKK----------------GFLDDALLAVREMR 359
Query: 509 -FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P+ YN L+ C + L+ EM G+ P+ ++++ ++ A +G+
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M E+G+ PD + Y++ I+V KRL A LF+ M +QP+ VTY +L+
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V++ L+++ +M KAG
Sbjct: 480 DGHCKEGN---VERALSLHDEMVKAG 502
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 45/410 (10%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G +++ +S LR + PN T++ G+ ++ + + +R + N+
Sbjct: 171 GHRKEALSVLRDMRGAG---CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNL 227
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FNS++N A ++ +V+ M K G+ D SYN L+ C G + A ++ E
Sbjct: 228 VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ KG++ DV T+++++ V A + A+ + +M G+ N IT+++LI+
Sbjct: 288 MTR---KGIMP-DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFC 343
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G ++ A+ EM Q +P+ C N L+ + D A L R
Sbjct: 344 KKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE----------- 392
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTY 518
ME K + T + + +++ + D +F+ P TY
Sbjct: 393 ------------MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ L++ C + A L M ++GL P+ +++T LID GNVE AL + M +
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
G+ PDVV Y+ I +S R K+A L ++ H + P + Y L+R
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 25/284 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + + MLS GV PN T++ L+ A G ++A+ +
Sbjct: 123 VLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLR 181
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC+PN+ N L+ A A + DRA RL R L V +G +
Sbjct: 182 DMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC-KA 240
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
ME K FD+ + P +YN L+ C +AL
Sbjct: 241 GRMEDARK----------------VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSV 284
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P+ +++T LI +GN+E A+ +++ MRE G+ + + +T I +
Sbjct: 285 FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L A EM+ +IQP++V Y L+ G + E ++
Sbjct: 345 KGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 148/365 (40%), Gaps = 51/365 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I V G+ ++ + ++R + + +N F +L++ L L
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + + YN L+ C+ G A+E+ V+ +EAKGV K DV TYSTI+
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEAREL---VREMEAKGV-KPDVVTYSTILS 410
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LF+ M+ G +P
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + +RA L + D + +
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL-------------------PDVVTYS 511
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDY-----------YRVK 533
N + S + +R FK P Y+ LM+ CC + + +K
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMK 570
Query: 534 ALMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
LMNE V S +W ++LI GNV AL K M + G +P+ +
Sbjct: 571 GLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630
Query: 587 TTAIK 591
+ I+
Sbjct: 631 ISLIR 635
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ IL+ A G G+ + AL
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ MR G P+ V Y T + R+ + +A L + M+ ++PNLVT+ +++
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G + + ++ V+ +M K G
Sbjct: 238 CKAGRMEDARK---VFDEMVKEG 257
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 160/369 (43%), Gaps = 13/369 (3%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I F + F KK L AL A ++ P++ +I+ + G ++R +
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V ++ ++++++ D ++ + M + GV+ D +Y+ L++ C
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ K++ + G L+ D TY++++ + AL + ++M+ AGV P+
Sbjct: 452 RLGDAHVLF---KNMISLG-LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV 507
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+S LIN + + ++A L ++ P + + L++ C A + L +
Sbjct: 508 VTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA-ELKSVLALLKG 566
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---SFKPT 514
+ + + Y DR N++ + + N + SF K+ F P
Sbjct: 567 FCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPN 626
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+T+ L++ V+A ++ ++ + + LID GNV+ L +L
Sbjct: 627 STSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLH 686
Query: 573 IMREDGMSP 581
M DG+ P
Sbjct: 687 GMARDGLLP 695
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 24/360 (6%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN- 339
R V ++Y ++ LM+ A ++ L + M+ GV D ++ + AC G
Sbjct: 61 REDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGGQW 120
Query: 340 ----TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+L Q + + A G L +V T+S+ V +A W+ AL + + M GV
Sbjct: 121 ERAVALLDQRALRLLGEMAAVG-LSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVP 179
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+S+ ++AC AG A+ + M A C PN Q + AC +A ++ RL
Sbjct: 180 PNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEW----RL 235
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + + + IS + + + Q N +P+ +P
Sbjct: 236 AQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPS---------MGVQPN 286
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y + AC + + R A+ +MR+ G+ + +S+T IDAC G E AL +L
Sbjct: 287 MWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLD 346
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
MR++G+ P V +++TAI C + ++ +A +L EM+ + PN V++ + A R G
Sbjct: 347 EMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAG 406
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 201/501 (40%), Gaps = 95/501 (18%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R GR + V+ +L + GVAP D F N C + G+ E V L
Sbjct: 81 RSGRWEEVLVLLDVMRSEGVAP----DHFAFGAAVNACAK---GGQWERAVAL------- 126
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
LD+ R ++L V L+ F + V G AL
Sbjct: 127 ------LDQ--RALRLLGEMAAVGLSPNV--------TTFSSAVAACGNAGQWERALGLL 170
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D + PN + + CG G + + I +R+ N N+ + + ++ A
Sbjct: 171 DQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKA 230
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ + + M++ GV ++ ++N + A GN QE ++ + + GV + +
Sbjct: 231 GEWRLAQGLLAEMREKGVAPNVITFNSAISAL---GNGGQWQEALNLLRDMPSMGV-QPN 286
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+++Y+ V D W AL V E M S G+ + +++++ I+ACA G E A+ L +
Sbjct: 287 MWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLD 346
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM G P + + + AC + Q+ RA L R
Sbjct: 347 EMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLR------------------------- 381
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ + + +PN V ++N + AC + +L+++M
Sbjct: 382 ---EMEEVGVSPNEV-------------------SFNAAIDACGRAGQWRAALSLLDKMS 419
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIM-----REDG-MSP----DVVAYTTAI 590
+ G+ I++ +I ACG A+ +L+ M + DG M+P DVV+Y+ AI
Sbjct: 420 SAGVPRGTITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAI 479
Query: 591 KVCVRSKRLKQAFSLFEEMKH 611
CVR+ ++A SL E ++
Sbjct: 480 DACVRAGEWEEAISLVELLRR 500
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 154/375 (41%), Gaps = 65/375 (17%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + F V GK AL + PN+ ID CG G++ ++
Sbjct: 178 VPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQ 237
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++R + V N+ FNS ++ N + L + ++M +GV +M SY + AC
Sbjct: 238 GLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTAC 297
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A ++ + + ++G+ + D +++ + A W+MAL + ++M G+
Sbjct: 298 GDNNRWARALAVH---EQMRSRGI-RGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGI 353
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P ++S+ I+AC +A+ L EM + G PN N + AC A Q+ A
Sbjct: 354 PPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALS 413
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L DK S P
Sbjct: 414 LL-----------------------------DKMSSAGVPR------------------G 426
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEM-----RTVG-LSP----NHISWTILIDACGGSG 562
T TYN ++ AC ++ R +++ EM +T G ++P + +S++ IDAC +G
Sbjct: 427 TITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAG 486
Query: 563 NVEGALQILKIMRED 577
E A+ +++++R D
Sbjct: 487 EWEEAISLVELLRRD 501
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ EM VGLSPN +++ + ACG +G E AL +L M E+G+ P+ ++ A+
Sbjct: 130 RALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAV 189
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
C ++ + + A ++ M+ PN+ TY + A + G Q LA
Sbjct: 190 SACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLA 241
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N R G+ + ++++L+ A SG E L +L +MR +G++PD A+ A+ C +
Sbjct: 58 NLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKG 117
Query: 597 KRLKQAFSLFE--------EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ ++A +L + EM + PN+ T+ + + A G+ + ++ L + M
Sbjct: 118 GQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAA---CGNAGQWERALGLLDQMA 174
Query: 649 KAG 651
+ G
Sbjct: 175 EEG 177
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 190/418 (45%), Gaps = 31/418 (7%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K SPN+ ++++ G +++ ++E+L++ T ++ ++ L+N A +
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LEV MQ G ++ +YN L+ AG A + E++ G + DV TY
Sbjct: 62 AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD---NGCVP-DVRTY 117
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ A A + +M G P+T T++SLI G ++AM L EEM +
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGE--DYDG 474
GC P+ + L+ + + +AF+LF+ S T + ALG+ D
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFD--KRFSFKPTTTTYNILMK 523
+ + M+ + + T N + Y+ D KR KP TY+ L+
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLIT 297
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+A ++ +M G P+ I++ LI+ G +G + A ++ M+ G +P
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y+T I ++ R++ A LFEEM+ IQP+L TY +++ + G + + +
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADR 415
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 151/336 (44%), Gaps = 48/336 (14%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN LL A AG AQ ++ E+K + DV +YS ++ A W+ A
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAK----WTPDVVSYSCLINSLGRAGKWEAA 63
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L+V +M + G PN T+++L++ AG ++A+ L EM GC P+ + N L+
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+A + AF LF E +++ + +T F NS
Sbjct: 124 LGKAGRLSEAFTLF-------------------------AEMRERGCVPDT--FTYNSLI 156
Query: 503 SSFDK---------------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
K R P TY+ L+ D VKA L EM+ G
Sbjct: 157 YGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRK 216
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++T L+DA G +G V+ AL++L M+E G+ P VV Y I + L +A++L
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+EMK +P++VTY L+ + L E Q L
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL 312
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 204/475 (42%), Gaps = 50/475 (10%)
Query: 205 PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID 264
PDV + Y+C++ G+ +AL + PN++ T++D
Sbjct: 42 PDV---VSYSCLI-----------NSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVD 87
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G G + ++ + ++R ++ +N L++ A L ++ M++ G +
Sbjct: 88 CLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP 147
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D +YN L+ G + A E+ ++ +E G DV TYS+++ A
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMEL---LEEMERHGC-PPDVMTYSSLITGLGKDGETVKA 203
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ ++M G P++IT+++L++A AG V+ A+ L +EM + G +P N L+
Sbjct: 204 FKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263
Query: 443 CVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ A+ L +++ T + D + ME +
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323
Query: 491 TNTPNFVPNSHYSS---------FDKRFS--FKPTTTTYNILMKACCTDYYRVKA---LM 536
T T N + N + FD+ S P TY+ L+ A RV++ L
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA-LGKAARVESACVLF 382
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +VG+ P+ ++ +I G +G V+ A ++ MR G+SPDV+ Y + R
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R K+A +FE+MK + P++ TY LL S+ EV + +++ + G
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSK---TKEVDDACGLLKELIEQG 494
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 200/460 (43%), Gaps = 44/460 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + GK A+ + ++H P++ ++I G G+ +K+ ++++++
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + F +LM+ A + LE+ M++ GV + +YN L+ G+ V
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + E+K + K DV TYS ++ A A +V + M G P+TIT+
Sbjct: 272 EAYNLLDEMK----RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITY 327
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--- 458
++LIN AGL+ A LF+ M GC P+ + L+ A +A + + A LF
Sbjct: 328 NTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMES 387
Query: 459 -------WTLSKTQVALGEDYD-GNTDRI-SNMEHKDKQSITNTPNFVP-NSHYSSFDKR 508
+T LG+ + DR+ S M K +P+ + N+ +S +
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL-----SPDVITYNAFLNSLGRG 442
Query: 509 FSFK---------------PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISW 551
FK P TY+ L+ + L+ E+ G + + + +
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
++ GNV+ A ++L+ G+ P +Y I ++ R+ +AF+ E++K
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+P++V+Y +L+ A + G ++ + ++M K G
Sbjct: 563 QGGKPDIVSYSSLISALGQTG---QIDTAFELLEEMSKRG 599
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 177/445 (39%), Gaps = 78/445 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + GK + AL D K+ P + +I G GD +++ + ++
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ ++ L+ + A L +V K M+K G D +YN L+ AG
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 340 TVLAQEIY----------------------GEVKHLEAKGVL---------KLDVFTYST 368
A ++ G+ +E+ VL + D+FTY +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ V A A ++ +M G++P+ IT+++ +N+ G ++A +FE+M ++G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ + LL + + D A L K + G +D +++ +
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLL------KELIEQGCAFD-------SLKFDECL 506
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
I + V +H L+ + GL P
Sbjct: 507 EILTSWGNVDEAH--------------------------------ELLQFANSKGLWPGA 534
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ LIDA +G V A L+ ++E G PD+V+Y++ I ++ ++ AF L EE
Sbjct: 535 SSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594
Query: 609 MKHYQIQPNLVTYITLLRARSRYGS 633
M ++ + +Y L+R +G+
Sbjct: 595 MSKRGLKLSPRSYSNLVRKLQDWGA 619
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 21/317 (6%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLE-----LFDGSGFKLLKNECQRLLDSGEVEMF 174
I I+ ++D VLKK+ + G P L +G G L N+ RL D + +
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK-- 353
Query: 175 VGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-FCNFVREFGK 233
G + + + L + R+ CV L + + D+ +C+ + GK
Sbjct: 354 -GCNPDVVTYSTLITALGKAARVESACV------LFEEMESVGIQPDLFTYCSIITVLGK 406
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+ A R + + SP++ ++ G G + ++R I+ED++ + ++
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 294 FNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+++L+ ++ + K + + G D ++ L+ GN A E+ ++
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL---LQ 523
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+KG+ +Y+ ++ A A A ED+ G P+ +++SSLI+A
Sbjct: 524 FANSKGLWP-GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 412 GLVEQAMHLFEEMLQAG 428
G ++ A L EEM + G
Sbjct: 583 GQIDTAFELLEEMSKRG 599
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN +++ L++A +G E A + + ++ +PDVV+Y+ I R+ + + A
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ EM+ +PNL TY TL+ + G E + LA +D
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD 107
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 192/429 (44%), Gaps = 42/429 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+FG+ ++S + +K P++ ++D GD + A+ + + S+ +
Sbjct: 174 QFGEVDTVISEM------EKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKP 227
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ +NS++ + ++ EV++ M GV D+ S+N+L+ C AG A Y
Sbjct: 228 GLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFY 287
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E++ + DV ++S ++ +F A + +M G+ P+ + ++ +I
Sbjct: 288 KEMRGRR----VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT------- 460
AGL+ +A+ + +EM+ GC P+ N LL + + A L
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 461 -LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T + G DGN ++ ++ D S D+R +P TYN
Sbjct: 404 LCTFTTLIHGYCRDGNIEKA--LQFFDTIS----------------DQRL--RPDIVTYN 443
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C D + L ++M + + PNH++++ILID+ G V+ A L M
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+++ Y + IK RS + + +M+H ++ P+L+TY TL+ + G +HE
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 638 QQCLAVYQD 646
L + ++
Sbjct: 564 FNLLKIMEN 572
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 35/383 (9%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + + + +KG+ K + TY++++K W A +V M + GV P
Sbjct: 207 AGDVEAAMAL---IDSMVSKGI-KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI AG +E+A+ ++EM P+ + L+ + D A
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDR---ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
R R + L V G + + +D+ F
Sbjct: 323 REMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA------------------FG 364
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN L+ C + A L+NEM+ G+ P+ ++T LI GN+E AL
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
Q + + + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
G +V A +M G
Sbjct: 485 CEKG---QVDNAFAFLDEMVNKG 504
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 173/410 (42%), Gaps = 36/410 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G + K+R ++ + + V ++ FN L+ A +L+ L YK M+ V D+ S+
Sbjct: 243 GRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSF 302
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ L+ G A E E++ L D Y+ ++ F A AL+V++
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFG----LMPDGVIYTMVIGGFCRAGLMLEALRVRD 358
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M++ G P+ +T+++L+N + A L EM + G P+ L+
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
Query: 448 QFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP- 498
++A + F R ++ + G G+ + +N D S PN V
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK-ANELWDDMHSREIFPNHVTY 477
Query: 499 ----NSH--YSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+SH D F+F P TYN ++K C + + + + +MR
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ P+ I++ LI G + A +LKIM + + PD V Y I +++
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++++M I+P+ TY++++ G+ ++ ++ +M + G
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGN---SKKSFQLHDEMLQKG 644
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 145/360 (40%), Gaps = 61/360 (16%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTL------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+ G + ++ + E LR ++ + ++ +N+L+N L E+ M++ G
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ ++ L+ C GN A + + + L+ D+ TY+T++
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR----LRPDIVTYNTLIDGMCRQGDL 455
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A ++ +DM S + PN +T+S LI++ G V+ A +EM+ G PN N +
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ RS +SK Q F+P
Sbjct: 516 IKGYC------------RSGNVSKGQ-----------------------------QFLPK 534
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+ DK P TYN L+ + +A L+ M + P+ +++ ++I
Sbjct: 535 MRH---DK---VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISG 588
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++ A + K M G+ PD Y + I V + K++F L +EM + P+
Sbjct: 589 FSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + ++ AL+ +D P++ T+ID G+C GD K
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID--GMCRQGDLGK 457
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +++D+ S+ + N ++ L++ + + M G++ ++ +YN ++K
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +GN Q+ +++H + + D+ TY+T++ + A + + M +
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDK----VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V P+ +T++ +I+ + G +++A ++++M G EP+ ++ V A ++
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKS 633
Query: 453 FRL 455
F+L
Sbjct: 634 FQL 636
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/476 (18%), Positives = 189/476 (39%), Gaps = 84/476 (17%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
+R GR D V + ++ GVAP D F +L R +GE+E + + +
Sbjct: 240 LRNGRWDKAREVFRAMDACGVAP----DVRSFNMLIGGFCR---AGELEEALRFYKEMRG 292
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYA------CIVPRADILFCNFVREFGKKRDL 237
R+ ++ ++ L + +++ A Y ++P +++ + F + +
Sbjct: 293 RRV-TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG-VIYTMVIGGFCRAGLM 350
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFN 295
+ ALR D P++ T+++ G+C + S A + +++ + V ++ F
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLN--GLCKERRLSDAEELLNEMKERGVPPDLCTFT 408
Query: 296 SLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++ D ++ L+ + + + D+ +YN L+ C G+ A E++ ++
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E + + TYS ++ + A ++M++ G+ PN +T++S+I +G
Sbjct: 469 E----IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V + +M P+ N L+ V+ + AF L +
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKI--------------- 569
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
ME+++ Q P TYN+++ + V
Sbjct: 570 --------MENENVQ------------------------PDAVTYNMIISG-----FSVH 592
Query: 534 ALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
M E M G+ P+ ++ +I+ +GN + + Q+ M + G++PD
Sbjct: 593 GNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 22/385 (5%)
Query: 254 PNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN + ++I +CG+ G +++ + +++ + + +++YVF L++ + L E
Sbjct: 218 PNEFTYGSLIRGLCGV-GKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M G ++ + L+ CL GN +A+E++ + + K DV+TY+ +
Sbjct: 277 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI----GEWGFKRDVWTYNVFI 332
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A++V ++M GV PN +T++SLI+ AG V A + + M ++G
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ C ILL ++ + D+A LF S L D T I + +
Sbjct: 393 PDIVTCCILLDGLCKSKRLDQAILLFNQLVES----GLTPDVWSYTILIHGC--CTSRRM 446
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N + + H + P TY+ L+ C A L+NEM G P+
Sbjct: 447 GEAMNLLRDMHLKNL------VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I+++IL+DA +++ A+ + M + G+ PDV+ YT I +S+R+ +A +LF E
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560
Query: 609 MKHYQIQPNLVTYITLLRARSRYGS 633
M + P++VTY L A + GS
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGS 585
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 152/375 (40%), Gaps = 48/375 (12%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
S +I+ + + L+ N+++ VN LK LE + + G + SY IL+
Sbjct: 91 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLK-ALEFHDEIVNNGFSLNEVSYGILI 149
Query: 332 KACCLAGNTV----LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
C G L + I E + + +K +V YS ++ + +
Sbjct: 150 NGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYN 209
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA----- 442
+M+ GV PN T+ SLI G + L +EM++ G + + +L+
Sbjct: 210 EMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNG 269
Query: 443 -CVEACQ-FDRAF-RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
VEA + FD R + ++ T + G GN D +
Sbjct: 270 MLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL----------------- 312
Query: 500 SHYSSFDK--RFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWT 552
FD + FK TYN+ + C D RV +EM G+ PN +++
Sbjct: 313 -----FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV---FDEMCREGVVPNIVTYN 364
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G V GA +I+K M G++PD+V + +SKRL QA LF ++
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
Query: 613 QIQPNLVTYITLLRA 627
+ P++ +Y L+
Sbjct: 425 GLTPDVWSYTILIHG 439
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 22/326 (6%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ Y+I++ C G E Y E + GV + FTY ++++ +
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNE---MMGNGVCP-NEFTYGSLIRGLCGVGKF 236
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ ++M+ G+ + ++ LI+ G++ +A +F+EM+ G EPN C L
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL 296
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ D A LF A+GE N+ + + V
Sbjct: 297 MGGYCLKGNVDMARELFD---------AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV-- 345
Query: 500 SHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
FD+ R P TYN L+ C + ++ M GL+P+ ++ IL+
Sbjct: 346 ---RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 402
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D S ++ A+ + + E G++PDV +YT I C S+R+ +A +L +M +
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 462
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P++VTY L+ R G + + L
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLL 488
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 127/357 (35%), Gaps = 64/357 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ F+ ++ + K G D + N +LK C+ G + A E + E+ L+
Sbjct: 88 VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEI----VNNGFSLNEV 143
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAG--------VTPNTITWSSLINACANAGLVEQ 416
+Y ++ + A+ + + V N + +S +I+ G V++
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+ EM+ G PN L++ +F F L
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI---------------- 247
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
R + + +L+ C + V+A
Sbjct: 248 -------------------------------RRGLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ +EM G PN ++ T L+ GNV+ A ++ + E G DV Y I
Sbjct: 277 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYC 336
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R++ A +F+EM + PN+VTY +L+ + G EV + + M ++G
Sbjct: 337 KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG---EVSGAWEIVKTMHRSG 390
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 191/441 (43%), Gaps = 84/441 (19%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--- 278
++F + + K LV A+ + K P++ C +++ GD +K +
Sbjct: 155 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLL------GDLLKGNKVELF 208
Query: 279 ---YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTL--------------EVYKNMQ 316
++ + + V ++Y + ++++ N D K L E+ ++M
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G++ D+ +Y+IL+ C+ + A+ + E+ + LK + TY+ ++ F
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG----LKPEPITYNALIDGFMRQ 324
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A ++K++M++ G+ N I W++L+N AG +E+A+ + +EM++ G EP+SQ
Sbjct: 325 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 384
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
++L++ RAF L
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEM------------------------------------- 407
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
K+ PT TY++++ C + A++ EM GL PN + +T L
Sbjct: 408 ----------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ A G VE + IL+ MRE G+ PDV Y + I ++KR+++A + EM ++
Sbjct: 458 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517
Query: 615 QPNLVTYITLLRARSRYGSLH 635
+PN TY + S+ G +
Sbjct: 518 RPNAHTYGAFIDGYSKAGEME 538
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 71/443 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL---------------- 297
PN + T++ G +SR I E +R Q + +++ +NSL
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 508
Query: 298 --------MNVNAH-------------DLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ NAH +++ + M GV+ ++ Y L++ C
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
GN A ++ + + ++ VL+ DV TYS ++ + A + ++ G+ P
Sbjct: 569 EGNVTEAFSVF---RFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T++SLI+ G V++A L EEM G P+ NIL+ +A + +RA LF
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 457 -----RSWTLS-KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
R T + T A+ + Y + + + + ++ + P
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP---------------- 728
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P YN+++ CC + KAL EM G + +S+ LI+ SG ++ A
Sbjct: 729 --PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEAN 785
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ M E P+ V YT+ I ++ + +A L+ EM+ + P TY +LL
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
G++ EV A++++M G
Sbjct: 846 HNIGNMSEVS---ALFEEMVAKG 865
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 196/482 (40%), Gaps = 67/482 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F ++ D+ A R D N+ I T+++ G+C G K+ I
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN--GVCKAGKMEKALEIM 369
Query: 280 EDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + V + ++ L+ + ++ E+ M+K + + +Y++++ C
Sbjct: 370 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 429
Query: 338 GN---------------------------TVLAQEIYGE-----VKHLEAKGVLKLDVFT 365
GN T A+E E ++ + +G+L DVF
Sbjct: 430 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP-DVFC 488
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ F AK + A +ML + PN T+ + I+ + AG +E A F EML
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNM 482
G PN L++ + AF +FR + LS+ + + Y R M
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR-FILSRRVLQDVQTYSVLIHGLSRNGKM 607
Query: 483 EH-----KDKQSITNTPN-FVPNSHYSSFDKRFS---------------FKPTTTTYNIL 521
+ Q PN F NS S K+ + P TYNIL
Sbjct: 608 HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNIL 667
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + R K L +++ GL+PN +++ ++D S N A Q+L+ M G+
Sbjct: 668 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD Y + C + ++ ++A LF+EM + V++ TL+ + G L E
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANH 786
Query: 640 CL 641
L
Sbjct: 787 LL 788
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 185/416 (44%), Gaps = 60/416 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
F+ + K ++ A R ++ PN+ I +I+ G C G+ ++ +++ + S
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCKEGNVTEAFSVFRFILS 584
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ ++ L++ + + K ++ +Q+ G++ + +YN L+ C GN
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ + KG+ D+ TY+ ++ A + A + +D+ G+TPN +T++
Sbjct: 645 ASQL---LEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++++ + A L EEML G P++ N++L C + +F++A LF+
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM--- 757
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+K F+ +T ++N L+
Sbjct: 758 ------------------------------------------LEKGFA---STVSFNTLI 772
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ C +A L+ EM PNH+++T LID +G + A ++ M+E +
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
P YT+ + + + +LFEEM I+P+ +TY ++ A R G++ E
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 543 GLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL P+ ++ ILI+ C + E L +L+ M + G+ P+ + Y I +R ++Q
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLE-MIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
AF + +EM I+ NL+ + TLL + G + ++ L + Q+M + G
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM---EKALEIMQEMMEKG 376
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 201/468 (42%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D A+R ++ + +P +I G G ++ A++E++
Sbjct: 259 LMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEI 318
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R +N+L+ V LK V M+K GV D +Y++L+ A AG
Sbjct: 319 RENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRW 378
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA V + + + YS I+ + D WQ + +V +DM S GV P+
Sbjct: 379 ESARIV---LKEMEASNV-EPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHF 434
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM FE ML G P++ N L+ ++ + + A LF
Sbjct: 435 YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELF---- 490
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GE M+ + + P TTYNI
Sbjct: 491 --------GE-----------MQQR------------------------GYSPCITTYNI 507
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
++ + + +V +++M++ GL PN I++T L+D G SG A++ L++++
Sbjct: 508 MINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 567
Query: 577 ---------------------------------DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+G++P ++A + I +R +AF
Sbjct: 568 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAF 627
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK I+P++VTY TL++A R + + Q+ AVY++M +G
Sbjct: 628 AVLQYMKENNIEPDVVTYTTLMKALIR---VEKFQKVPAVYEEMVTSG 672
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 168/404 (41%), Gaps = 42/404 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L+ A D++ L + M++ G D +Y+ +
Sbjct: 167 RSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 226
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ + ++ + Q++Y E++ +++D + I+ F+ A A++
Sbjct: 227 IQYLTRSNKIDSPILQKLYTEIE----TDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAM 282
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
S G+ P T ++I A N+G +A LFEE+ + G EP ++ N LL+ V+
Sbjct: 283 AQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGS 342
Query: 449 FDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + K V E Y D ++ + I N PNS+
Sbjct: 343 LKDA--EFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVY 400
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ A M
Sbjct: 401 SRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDH--AMATFERM 458
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LI+ SG A ++ M++ G SP + Y I +R
Sbjct: 459 LSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRW 518
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+Q +M+ + PN +TY TL+ + G + +CL V
Sbjct: 519 EQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEV 562
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN Y+ I+ G++ KS + +D++S V + + +N +++ + L +
Sbjct: 395 PNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMAT 454
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G+ D ++N L+ C +G +A+E++GE ++ +G + TY+ ++
Sbjct: 455 FERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGE---MQQRGYSPC-ITTYNIMIN 510
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + W+ M S G+ PN+IT+++L++ +G A+ E + G +P
Sbjct: 511 SMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKP 570
Query: 432 NSQCCNILLQACVEACQFD---RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
S N L+ A + + AFRL + L+ + +AL + + + +D +
Sbjct: 571 TSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGE-----DRRDAE 625
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K + +P TY LMKA + +V A+ EM T G +P
Sbjct: 626 AFA----------VLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTP 675
Query: 547 NHISWTILIDA 557
+ + +L A
Sbjct: 676 DRKARAMLRSA 686
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 170/403 (42%), Gaps = 58/403 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP + +I++ G K+ I ++ Q + N ++ +++ V D
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M G+ D +YNIL+ A C G A E+ ++ + L+ TY+ I+
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLR----TYTIII 482
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +MA + DM AG P+ T++ +++ A AG +++A + +EM+ AG
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + L++ AF+ F +RI
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYF--------------------NRI----------- 571
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
K KP Y L+KACC A+ EM G+ N+
Sbjct: 572 ----------------KEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNN 615
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ IL+D G++ A I++ MR +G++PD+ +YT+ I C ++ + +A E+
Sbjct: 616 YIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQ 675
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
MK +QPNL Y TL+ + S ++ L Y +M AG
Sbjct: 676 MKQQGVQPNLQAYTTLIHG---WASASYPEKALICYDEMKSAG 715
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 44/449 (9%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
++R A I P + N + + +DL A+ + + SPN II G
Sbjct: 217 SMRAAGIEPNVHS-YTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRL 275
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD + ++ S+N N ++N++++ A +++ + M++ G+ A + Y
Sbjct: 276 GDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLY 335
Query: 328 NILLKAC--CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
N+L+ C A + L ++ +K G L V +Y ++ +++ AL++
Sbjct: 336 NMLMDGYVHCRAVDKCL--NVFRRLKARTETG-LSPTVVSYGCLINLYSKLGKMDKALQI 392
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+M G+ N T+S +I+ G A +FE+M AG +P+ NIL+ A +
Sbjct: 393 SNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCK 452
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q +RA L ++ ME D T + +
Sbjct: 453 NGQMNRALEL-----------------------LARMESGDCPPTLRTYTIIIDGFMKIG 489
Query: 506 DKRFS-----------FKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
D R + F+P+ TYN++M A R ++++EM G+ PN S+T
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYT 549
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI+ G++ A + ++E G+ PDV+AY + +K C ++ R++ ++ EM
Sbjct: 550 TLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAA 609
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ N Y LL ++ G + E +
Sbjct: 610 GVPMNNYIYNILLDGWAQRGDMWEASDIM 638
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 179/442 (40%), Gaps = 77/442 (17%)
Query: 224 FCNFVREFGKK-RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F N V + K R +V A K + P +++ G GD +RA +E +
Sbjct: 166 FRNLVEDHPKDARKVVDAF-------KRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESM 218
Query: 283 RSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R+ + N++ + +L++ A DL+ + + M+ GV + A+Y++++
Sbjct: 219 RAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISG------- 271
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
YG + +EA +W+Q AL S N +
Sbjct: 272 ------YGRLGDVEAA-------------------ERWFQRAL-------SENWHHNDVI 299
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++I+A AG +E+A + M + G E N+L+ V D+ +FR
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 461 ------LSKTQVALG-----EDYDGNTDR---ISN-MEHKDKQSITNTPNFVPNSHYSSF 505
LS T V+ G G D+ ISN ME + + T + + + +
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Query: 506 DKRFSF-----------KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWT 552
D +F KP TYNILM A C + R L+ M + P ++T
Sbjct: 420 DTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYT 479
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID G++ A + ++ M+ G P Y + ++ ++ +A S+ +EM
Sbjct: 480 IIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVA 539
Query: 613 QIQPNLVTYITLLRARSRYGSL 634
+ PN +Y TL+ + G +
Sbjct: 540 GVHPNERSYTTLIEGYACIGDM 561
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ GD + + ++ + ++ + SL+ A ++ TL +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M GV + YNILL G+ A +I +++H +G L D+ +Y++ +
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRH---EG-LTPDIHSYTSFIN 658
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + E M GV PN +++LI+ A+A E+A+ ++EM AG P
Sbjct: 659 ACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIP 718
Query: 432 N 432
+
Sbjct: 719 D 719
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P T+L++ G G+ A + MR G+ P+V +YT I ++ L+ A +
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
EEM+ + PN TY ++ S YG L +V+ +Q
Sbjct: 250 VEEMEAEGVSPNAATYSVII---SGYGRLGDVEAAERWFQ 286
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D + +A MR G+ PN S+T LI A + ++ GA+ ++ M +G+SP+ Y+
Sbjct: 207 DKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYS 266
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I R ++ A F+ N V Y ++ A + G++ + + ++
Sbjct: 267 VIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEE 325
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 510 SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+P +Y L+ A D A + EM G+SPN +++++I G G+VE A
Sbjct: 222 GIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAA 281
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + + + V Y I ++ +++A ++ M+ ++ L Y L+
Sbjct: 282 ERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDG 341
Query: 628 RSRYGSLHEVQQCLAVYQ 645
Y V +CL V++
Sbjct: 342 ---YVHCRAVDKCLNVFR 356
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 37/423 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++Y ++ + G ++ D+ + V +I +N L N L +K
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-GFRILGLISGAWK 361
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Q++ G+ D+ +Y IL+ C GN +E + + + ++G LKL + TY+ ++
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNI---EESFKLKEKMLSQG-LKLSIVTYTVLL 417
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A+ + +M G+ P+ +T+S LI+ G VE+A+ L+EEM
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-------LGEDYDGNTDRISNME 483
PNS C+ ++ E A F S T K+ VA + D I
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVT--KSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 484 HKDKQSITN--TPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
KQ I +P V NS F K+ PT+ TY LM
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C D + + +++EM + P I++T+++ G + ++Q+LK M G+ PD
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y T I+ ++ L++AF L +M + +QP+ VTY L+ YG+L + + L
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715
Query: 644 YQD 646
QD
Sbjct: 716 LQD 718
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 153/360 (42%), Gaps = 45/360 (12%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D+ SYNILL C+AG+ A E + +E GV + D+ TY+ + F
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND---MENHGV-EPDIVTYNILANGFR 351
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T++ LI G +E++ L E+ML G + +
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY-------DGNTDRISNMEHKDK 487
+LL + ++ + D A L + + L D G R + E +
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEV----IGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467
Query: 488 QSITNTPNFVPNSHYSS------FDK------RFSFKPTTTT--------YNILMKACCT 527
+ PNS S F+K + F T + YNI++
Sbjct: 468 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG--- 524
Query: 528 DYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
Y ++ + +R+ G+SP +++ LI G + A+++L ++ G+ P
Sbjct: 525 -YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YTT + + F + EM+ I+P +TY +++ + G LHE Q L
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 144/352 (40%), Gaps = 72/352 (20%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
HD F L M+ L + +A+YN LL +T + ++Y E+K A GV + +
Sbjct: 185 HDALFVL---AKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIK---ASGVPQ-N 234
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+T ++ Q A+ + P+ +++++L++ G V+ A F
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M++ G P+ NILL A + A ++M
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF-----------------------TNDM 331
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN----- 537
E+ +P TYNIL +R+ L++
Sbjct: 332 ENH------------------------GVEPDIVTYNILANG-----FRILGLISGAWKV 362
Query: 538 --EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M GL+P+ +++TILI GN+E + ++ + M G+ +V YT + +
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S R+ +A L EM+ ++P+L+TY L+ + G+ V++ + +Y++M
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA---VEEAIELYEEM 471
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/395 (18%), Positives = 155/395 (39%), Gaps = 57/395 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
PN ++C II G +++ ++ + +V I ++N +++ A ++ +
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
YK + + G+ + ++N L+ C G A ++ +K G++ V TY+T++
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK---VHGLVPTSV-TYTTLMN 593
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + +M + + P IT++ ++ G + +++ L + M G P
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N ++Q+ +A +AF+L ++H
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQM----------------------LQH------- 684
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNH 548
S +P+ TYN+L+ C Y +K L+ ++ +
Sbjct: 685 ------------------SLQPSPVTYNVLINGLCV-YGNLKDADRLLVTLQDQSIRLTK 725
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T +I A G+V+ AL M E G + Y+ I + + A F
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
M + I P+ + +L A R G + V + A+
Sbjct: 786 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 820
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 24/344 (6%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
+D+ K + + + +ID G+ ++ Y+ + + ++ I FNSL+
Sbjct: 503 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 562
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L +++ ++ G++ +Y L+ C G+ ++ + +EAK + K
Sbjct: 563 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM---HSMFDMLHEMEAKAI-KP 618
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
TY+ +VK ++++ + M + G+ P+ IT++++I + A +++A L
Sbjct: 619 TQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH 678
Query: 422 EEMLQAGCEPNSQCCNILLQA-CVEAC--QFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+MLQ +P+ N+L+ CV DR + ++ T+VA T
Sbjct: 679 NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAY-------TTI 731
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-CCTDYYRVKALMN 537
I H K + N F F+ S + + N L K TD K
Sbjct: 732 IK--AHCAKGDVQNALVFFHQMVERGFE--VSIRDYSAVINRLCKRNLITD---AKFFFC 784
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M T G+ P+ ++++A SG+ +I +M + G+ P
Sbjct: 785 MMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 180/386 (46%), Gaps = 33/386 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++ + S V N+Y +N L+ H K L + ++M+ G ++ +YN L+
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR-KEALSILRDMRGAGCGPNVVTYNTLV 232
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A AG A+ + G ++ +G LK ++ T++++V A + A KV ++M+
Sbjct: 233 AAFFRAGEVDGAERLVGMMR----EGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +++++L+ AG +A+ +F EM Q G P+ L+ +A +R
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 452 AF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-K 507
A R R L +V DG + F+ ++ + K
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKK----------------GFLDDALLAVRGMK 392
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ KP+ YN L+ C + L++EM GL P+ ++++ +I A + +
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ + M E G+ PD + Y++ I+V KRL A LF+ M +QP+ TY +L+
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V+ L+++ M KAG
Sbjct: 513 DGHCKEGN---VESALSLHDKMVKAG 535
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 183/418 (43%), Gaps = 33/418 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
L SA R +D+ +PN+Y ++ +CG G ++ +I D+R N+ +N
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGR-GHRKEALSILRDMRGAGCGPNVVTYN 229
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L+ A ++ + M++ G+ ++ ++N ++ C AG A++++ E+
Sbjct: 230 TLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM--- 286
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L D +Y+T+V + A AL V +M G+ P+ +T++SLI+ AG
Sbjct: 287 -VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 345
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------A 467
+E+A+ L +M + G + N L+ + D A R + + A
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405
Query: 468 LGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------- 512
L Y D + + ME K + T + + +++ + D +F+
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 513 --PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+ L++ C + A L M +GL P+ ++T LID GNVE AL
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ M + G+ PDVV Y+ I +S R +A L ++ H P Y L+
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH 583
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + + MLS GV PN T++ L+ A G ++A+ +
Sbjct: 156 VLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN N L+ A A + D A RL R L V +G +
Sbjct: 215 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC-KA 273
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
ME K FD+ R P +YN L+ C +AL
Sbjct: 274 GKMEDARK----------------VFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSV 317
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P+ +++T LI +GN+E A+ +++ MRE G+ + V +T I +
Sbjct: 318 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L A MK +I+P++V Y L+ G + E ++ L
Sbjct: 378 KGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 65/393 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I V G+ ++ + +R + + +N F +L++ L L
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + + YN L+ C+ G A+E+ E +EAKG LK DV TYSTI+
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE---MEAKG-LKPDVVTYSTIIS 443
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LF+ M++ G +P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------ 485
+ + T + G +GN + ++ K
Sbjct: 504 DE---------------------------FTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Query: 486 --DKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKAC----------C 526
D + + N + S + ++ FK P T Y+ LM C
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596
Query: 527 TDYYRVKALMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGM 579
+ +K LMNE V S +W ++LI +GNV AL K M + G
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+P+ + + I+ + + +A + +++ +Y
Sbjct: 657 APNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 161/373 (43%), Gaps = 21/373 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F + F KK L AL A K+ P++ +I+ + G ++R +
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + ++ ++++++ D E+ + M + GV+ D +Y+ L++ C G
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC--G 482
Query: 339 NTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L+ H+ K ++KL D FTY++++ + AL + + M+ AGV
Sbjct: 483 EKRLSDA------HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+S LIN + + +A L ++ P + + L+ C +A +
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA-ELKSVLA 595
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---S 510
L + + + + Y DR N++ + + N + SF K+
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +T+ L++ + V+A ++ ++ + + LID GNV+ L
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVL 715
Query: 569 QILKIMREDGMSP 581
+L M +DG+ P
Sbjct: 716 DVLHGMAKDGLLP 728
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ IL+ A G G+ + AL
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
IL+ MR G P+VV Y T + R+ + A L M+ ++PNLVT+ +++
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G + + ++ V+ +M + G
Sbjct: 271 CKAGKMEDARK---VFDEMVREG 290
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 211/469 (44%), Gaps = 63/469 (13%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 339 N-----TVLAQ---------------------EIYGEVK------HLEAKGVLKLDVFTY 366
N +LAQ EI E K L+A G L TY
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG-LSPTAATY 309
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
IVK+F A AL + E+M GV+PN + ++ +++ A G A ++E+M+
Sbjct: 310 GCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 369
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG +P+ NIL+ A +A + D+A + + ++ + E Y D H
Sbjct: 370 AGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTI-ETYTSILDGYVKGGHIQ 428
Query: 487 KQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTV 542
K FD K +P +YN L+ A + +++EM
Sbjct: 429 KA-------------LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLAN 475
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN S+T L + +G+VE A + + M+++ ++ D+VAY +K C +S +++A
Sbjct: 476 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 535
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+F+++ ++ N +TY T+L +R G L + + L +DM K G
Sbjct: 536 VEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL---KDMQKHG 581
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 174/409 (42%), Gaps = 55/409 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + F + RD L + K SP I+ + G+ K+ I E++
Sbjct: 273 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 332
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V+ N ++ +M+ A FT +V+++M G+ D+ +YNIL+ A C AG
Sbjct: 333 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRM 392
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ G +++++A +L + TY++I+ + Q AL+V + + +AG+ P ++
Sbjct: 393 ---DKALGVLENIQANRLLPT-IETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVS 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++ A A +E A + +EML G PN + L + A ++AF +F+
Sbjct: 449 YNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQR-- 506
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +A+ Y
Sbjct: 507 MKKENLAI---------------------------------------------DIVAYGA 521
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KACC R + ++ GL N I++ ++D G + A +LK M++ G
Sbjct: 522 LLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHG 581
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D + YT+ IK C RS ++ M+ +++ N TY TL+
Sbjct: 582 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 630
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + +++ + V N + +L A D++ +++ M+K + D+ +Y LLK
Sbjct: 465 ARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLK 524
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
ACC +G A E++ ++ LK + TY T++ +A A + +DM
Sbjct: 525 ACCKSGAMQRAVEVFQQI----TDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKH 580
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +TI ++S I AC +G E+ M + E N++ L+ + A D+A
Sbjct: 581 GFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQA 640
Query: 453 FRLFRSWTLSKTQV 466
+ S Q+
Sbjct: 641 ISCYEQAKASGLQL 654
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP Y +L+ A D +A MR + PN +T LI A + ++EGA+
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+ + + + I + + A FE+ K + P + Y ++++A
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 630 RYGSLHEVQQCLA 642
+ G++ V+ LA
Sbjct: 248 QAGNMETVEALLA 260
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 36/287 (12%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+ + T+ST++ + ++A + +ML AG+TP+ +SLINA A AG +QA+
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F++M + G P+ N L+ AC A DRA ++F + Q L N
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLS----QAGLSP----NDRT 236
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
S + H SH D+ FS+ +P TY+ L+ AC
Sbjct: 237 FSALIH---------------SHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGR 281
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A ++EM G+ PN ++WT LIDACG +E + ++ K MRE G P+ V
Sbjct: 282 AGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVT 341
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + C+++ L AF++ E M I+P VTY +LL +R G
Sbjct: 342 CSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLG 388
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 158/377 (41%), Gaps = 57/377 (15%)
Query: 201 CVNKPDVNLAIRYACIVPR-ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYI 258
C+++ + LA A P+ + CN F+R G + + AY+A P +
Sbjct: 72 CMSRRRLKLAAATAAASPKQGGVPACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVT 131
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ 316
T+I G C + + ++ +T ++ NSL+N A L+V+ M
Sbjct: 132 FSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMS 191
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ GV + ++N L+ AC AG+ A++++ L G+ D T+S ++ A
Sbjct: 192 RYGVTPSVITFNTLIDACGRAGDIDRARQVF---SRLSQAGLSPND-RTFSALIHSHAVQ 247
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A ++M + G+ PN +T+S+LINAC AG + +A +EM G EPN
Sbjct: 248 GQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTW 307
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ AC + + + +F+LF+ E +++ ++ PN
Sbjct: 308 TTLIDACGKGKELEWSFKLFK-------------------------EMRERGTV---PNG 339
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTIL 554
V T + LM AC + A++ M VG+ P +++T L
Sbjct: 340 V-------------------TCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSL 380
Query: 555 IDACGGSGNVEGALQIL 571
+ C G + A +L
Sbjct: 381 LTQCARLGQADRAGIVL 397
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
N KA D + + ++M G++P+ I++ LIDACG +G+++ A Q+ + + G
Sbjct: 172 NAFAKAGSPD--QALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAG 229
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+SP+ ++ I ++ +AFS +EM+ ++PN VTY L+ A R G L
Sbjct: 230 LSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAF 289
Query: 639 QCL 641
Q L
Sbjct: 290 QTL 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED----GMSPDV 583
+ +RV + EMR+ G+ P+ ++ L++ C G + AL ++++M +D G+ PD
Sbjct: 874 NLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDA 933
Query: 584 VAYTTAIKVCVRS--KRLKQAFSLFEEMK----HYQI--QPNLVTYITLLRA 627
V YT+ IK R+ R+++A +F M+ H+ +P VTY L+RA
Sbjct: 934 VTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRA 985
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP--NHISWTILIDACGGSGNVEGAL 568
P T+ +L+ A T KA LM R G N ++++ L+ ACG + + A
Sbjct: 575 PDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAF 634
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+I++ MRE G+ P Y ++VC S+ K A +FE M+ ++P + +Y +LL+A
Sbjct: 635 RIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAI 694
Query: 629 SRYGSLH 635
S +L
Sbjct: 695 SEENTLR 701
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P ++++ LI G V A + + M E G++PDV A + I ++ QA
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+F++M Y + P+++T+ TL+ A R G + +Q V+ + +AG
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQ---VFSRLSQAG 229
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + GE +G +++ S ++++F A A KV E M+ +P+
Sbjct: 517 GGATTGEGGSGETATARGRGAWRMNRKLESDLLQLFGQADQVDAAFKVLEGMVERRDSPD 576
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEACQFDRAFRL 455
TW L+NA AG +++A+ L E G E N + LL AC A + RAFR+
Sbjct: 577 GETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRI 636
Query: 456 FRS 458
+S
Sbjct: 637 VQS 639
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F+EM G P+ + N L+ C + +FDRA + R L D T I
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 480 SNMEH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYR 531
++ + I T N H+S+F +PT TY LM+A DY R
Sbjct: 941 KAAARAVPPRVEEAEEIFATMQQRTN-HFSTF-----ARPTEVTYAHLMRASVMAEDYGR 994
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + + G++P S + ACGG+G+V+ ALQ+ +MRE G+ P+ A +
Sbjct: 995 ALEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVN 1054
Query: 592 VC 593
+C
Sbjct: 1055 LC 1056
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV--VAYTTAIKVCVRSKRLKQA 602
SP+ +W +L++A +G ++ A+++++ R +G ++ + Y+ + C R+K+L +A
Sbjct: 574 SPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARA 633
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
F + + M+ ++P TY+ L+
Sbjct: 634 FRIVQSMRETGVKPTEGTYLALM 656
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM----QKLGVMADMASYNILL 331
+++++RS+ V ++ +N+L+N A +F L V + M + G+ D +Y L+
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 332 KACCLAGNTVL--AQEIYGEVK----HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
KA A + A+EI+ ++ H + TY+ +++ A+ + AL++
Sbjct: 941 KAAARAVPPRVEEAEEIFATMQQRTNHFST--FARPTEVTYAHLMRASVMAEDYGRALEI 998
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
LSAGV P + + + AC AG V+ A+ +++ M + G PNS+ L+ C
Sbjct: 999 WRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRA 1058
Query: 446 ACQFDRAFRLFRSWTLS-------KTQVALGEDYDGNTDRISNMEHKD 486
A R+ R + + ++ V++ + G+T R N ++
Sbjct: 1059 NGLQSVAARIMRERSKTDATTNRRRSNVSMRRNSAGSTSRKRNKSTRN 1106
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 187/409 (45%), Gaps = 45/409 (11%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
I T++D I G+ K +++ L+ T ++ + L+N + + LEV K M
Sbjct: 410 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 469
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I++ F
Sbjct: 470 EVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV----VKDGLKPDVVLYNNIIRAFCG 525
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +A+ +F+ M +GC P
Sbjct: 526 MGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHT 585
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE CQ ++A + +L+ IS EH T
Sbjct: 586 FNALILGLVEKCQMEKAVEILDEMSLAG---------------ISPNEH--------TYT 622
Query: 496 FVPNSHYSSFDKRFSFKPTTT-----------TYNILMKACCTDYYRVKAL--MNEMRTV 542
+ + + S D +F+ T TY L+KACC AL EM +
Sbjct: 623 TIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQ 682
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ N + ILID G+V A ++++ M+++G+ PD+ YT+ I C ++ +++A
Sbjct: 683 KIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRA 742
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+EM+ ++PN+ TY TL+ +R SL E + L +Q+M AG
Sbjct: 743 TKTIQEMEVVGVKPNIKTYTTLIHGWAR-ASLPE--KALKCFQEMKSAG 788
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 185/444 (41%), Gaps = 69/444 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E +R++ + +V+ SL++ A D++ L + M++ G+ + +Y
Sbjct: 282 GDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 341
Query: 328 NILLKACCLAGN---------------TVLAQEIYGE-----------------VKHLEA 355
+IL+ + T L IYG V+ +E
Sbjct: 342 SILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEE 401
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G TP+ I++ LIN G V
Sbjct: 402 EGIDAPIDI--YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ V + AF +F K V L +
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 519
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFK-------- 512
GN DR + M+ + + T T F+P H S D R + +
Sbjct: 520 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRT--FMPIIHGFARSGDMRRALEIFDMMRWS 577
Query: 513 ---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA +++EM G+SPN ++T ++ G+ A
Sbjct: 578 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 637
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ ++ +G+ DV Y +K C +S R++ A ++ EM +I N Y L+
Sbjct: 638 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 697
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G + E + + Q M + G
Sbjct: 698 WARRGDVWEAAELM---QQMKQEG 718
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ A+R +K P II GD ++ I++
Sbjct: 514 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 573
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+ V ++ +E+ M G+ + +Y ++ G+
Sbjct: 574 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 633
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + ++K +G L+LDV+TY ++K + Q AL V +M S + NT
Sbjct: 634 TGKAFEYFTKLK---TEG-LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 689
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G V +A L ++M Q G +P+ + AC +A RA +
Sbjct: 690 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATK 744
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN + TI+ GD K+ + L+++ + L++Y + +L+ + ++ L
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A E+ ++ ++ +GV + D+ TY++ +
Sbjct: 675 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL---MQQMKQEGV-QPDIHTYTSFI 730
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A K ++M GV PN T+++LI+ A A L E+A+ F+EM AG +
Sbjct: 731 NACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 790
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 791 PDKAVYHCLMTS 802
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 27/278 (9%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ ++ E + P+ + ++ A G + A FE M G EP S
Sbjct: 253 WQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTS 308
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPN 495
L+ A + A R +++L Y G +I++ E D
Sbjct: 309 LIHAYAVGRDMEEALSCVRKMKEEGIEMSL-VTYSILVGGFAKIADAEAAD--------- 358
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
H+ K Y ++ A C + + +AL+ EM G+ +
Sbjct: 359 -----HWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 413
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D GN E L + ++E G +P V++Y I + ++ ++ +A + + M+
Sbjct: 414 MMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 473
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I+ N+ TY L+ R L + AV++D+ K G
Sbjct: 474 IKHNMKTYSMLINGFVR---LKDWANAFAVFEDVVKDG 508
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 179/416 (43%), Gaps = 56/416 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L +D H +P+++ +I+ G G Y S + + ++ + V+ +
Sbjct: 156 LGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPS 215
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ AD+ +YN LL AC G L E
Sbjct: 216 ILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRG---LGDEAE 272
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G+L D+ TYS +V+ F + ++ ++M S G P+ +++ L+ A
Sbjct: 273 MVFRTMNEGGILP-DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEA 331
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ +ILL ++D LF +S T+
Sbjct: 332 HAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTE-- 389
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
P TYNIL+
Sbjct: 390 ---------------------------------------------PNAATYNILINVFGE 404
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + PN ++ LI ACG G E A +IL M E G+ P A
Sbjct: 405 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 464
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YT I+ ++ ++A F M +P + TY +L++ ++ G E + L
Sbjct: 465 YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL 520
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 174/433 (40%), Gaps = 58/433 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I +I V G G K + I++++
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S V +++ F +L+N + ++ +LE+ M+K V + +YN ++ +C G
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGG-- 230
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ +E+ G + +G+ + D+ TY+T++ A A V M G+ P+ T
Sbjct: 231 LDWEELLGLFAQMRHEGI-QADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITT 289
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+ +E+ L +EM G P+ N+LL+A ++ A +FR
Sbjct: 290 YSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQ-- 347
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
VPN+ TY+I
Sbjct: 348 ------------------------------MQGAGCVPNA---------------ATYSI 362
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y V+ L EM+ PN ++ ILI+ G G + + + M E+
Sbjct: 363 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 422
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P++ Y I C + + A + M + P+ Y ++ A YG +
Sbjct: 423 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEA---YGQAALYE 479
Query: 639 QCLAVYQDMWKAG 651
+ L + M + G
Sbjct: 480 EALVAFNTMNEVG 492
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 190/447 (42%), Gaps = 34/447 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ S+L D KK SP++ T+I+ C G D+ + ++ +
Sbjct: 184 FTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQM 243
Query: 283 RSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + + +I +N+L++ A L E V++ M + G++ D+ +Y+ L++ G
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETF---GKL 300
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ +K +E+ G D+ +Y+ +++ A + + A+ V M AG PN T
Sbjct: 301 NRLEKVSELLKEMESGGSFP-DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAAT 359
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+N G + LF EM + EPN+ NIL+ E F LF
Sbjct: 360 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMV 419
Query: 461 LSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNSH-YSSFDKRF------ 509
+ + E Y+G H+D + I N VP+S Y+ + +
Sbjct: 420 EENVEPNM-ETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALY 478
Query: 510 -------------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
KPT TYN L++ Y +A++ +M G++ N ++ +
Sbjct: 479 EEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGV 538
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+A G E A++ M + PD + V + ++++ F E+K I
Sbjct: 539 IEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGI 598
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCL 641
P+++ Y +L ++ + Q L
Sbjct: 599 LPSVMCYCMMLAVYAKADRWDDAHQLL 625
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + + + +G+ AL A++ + S P + ++I + G Y +S
Sbjct: 458 VVPSSKA-YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKES 516
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + V N FN ++ +F ++ Y M+K D + +L
Sbjct: 517 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSV 576
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E +GE+K L G+L V Y ++ V+A A W A ++ ++M +
Sbjct: 577 YCFAGLVEESEEQFGEIKAL---GILP-SVMCYCMMLAVYAKADRWDDAHQLLDEMFTNR 632
Query: 394 VTPNTITWSSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ +I +N +VE ++FE++ GC + N LL+A Q
Sbjct: 633 VSNIHQVIGQMIRGDYDDDSNWQMVE---YVFEKLKSEGCSLGVRFYNTLLEALWWLGQK 689
Query: 450 DRAFRLFRSWT 460
+RA R+ T
Sbjct: 690 ERATRVLNEAT 700
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 206 DVNLAIRYACIVPRADI--LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
D+ L ++ + P A + N E G +++V+ +D ++++ PNM +I
Sbjct: 378 DLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF--HDMVEENVE-PNMETYEGLI 434
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
CG G + ++ I + + V + + ++ + L + M ++G
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 494
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YN L++ G L +E + + GV + + T++ +++ F ++
Sbjct: 495 PTVETYNSLIQMFAKGG---LYKESEAILLKMGQSGVAR-NRDTFNGVIEAFRQGGQFEE 550
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+K +M A P+ T ++++ AGLVE++ F E+ G P+ C ++L
Sbjct: 551 AIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLA 610
Query: 442 ACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNME 483
+A ++D A +L +S +G+ G+ D SN +
Sbjct: 611 VYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQ 655
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 23/398 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
I T++D I G+ K +++ L+ T ++ + L+N + + LEV K M
Sbjct: 431 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMM 490
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I++ F
Sbjct: 491 EVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV----VKDGLKPDVVLYNNIIRAFCG 546
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +A+ +F+ M +GC P
Sbjct: 547 MGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHT 606
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE CQ ++A + +L+ N + + H S+ +T
Sbjct: 607 FNALILGLVEKCQMEKAVEILDEMSLAGISP--------NEHTYTTIMH-GYASLGDTGK 657
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
Y + K + TY L+KACC AL EM + + N + I
Sbjct: 658 AF---EYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNI 714
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A ++++ M+++G+ PD+ YT+ I C ++ +++A +EM+
Sbjct: 715 LIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL+ +R SL E + L +Q+M AG
Sbjct: 775 VKPNIKTYTTLIHGWAR-ASLPE--KALKCFQEMKSAG 809
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 181/434 (41%), Gaps = 66/434 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E +R++ + +V+ SL++ A D++ L + M++ G+ + +Y
Sbjct: 303 GDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 362
Query: 328 NILLKACCLAGN---------------TVLAQEIYGE-----------------VKHLEA 355
+IL+ + T L IYG V+ +E
Sbjct: 363 SILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEE 422
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G TP+ I++ LIN G V
Sbjct: 423 EGIDAPIDI--YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ V + AF +F K V L +
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 540
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFK-------- 512
GN DR + M+ + + T T F+P H S D R + +
Sbjct: 541 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRT--FMPIIHGFARSGDMRRALEIFDMMRWS 598
Query: 513 ---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA +++EM G+SPN ++T ++ G+ A
Sbjct: 599 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 658
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ ++ +G+ DV Y +K C +S R++ A ++ EM +I N Y L+
Sbjct: 659 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 718
Query: 628 RSRYGSLHEVQQCL 641
+R G + E + +
Sbjct: 719 WARRGDVWEAAELM 732
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ A+R +K P II GD ++ I++
Sbjct: 535 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 594
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+ V ++ +E+ M G+ + +Y ++ G+
Sbjct: 595 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 654
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + ++K +G L+LDV+TY ++K + Q AL V +M S + NT
Sbjct: 655 TGKAFEYFTKLK---TEG-LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 710
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G V +A L ++M Q G +P+ + AC +A RA +
Sbjct: 711 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATK 765
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN + TI+ GD K+ + L+++ + L++Y + +L+ + ++ L
Sbjct: 636 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 695
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A E+ ++ ++ +GV + D+ TY++ +
Sbjct: 696 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL---MQQMKQEGV-QPDIHTYTSFI 751
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A K ++M GV PN T+++LI+ A A L E+A+ F+EM AG +
Sbjct: 752 NACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 811
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 812 PDKAVYHCLMTS 823
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 27/278 (9%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
WQ ++ E + P+ + ++ A G + A FE M G EP S
Sbjct: 274 WQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTS 329
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPN 495
L+ A + A R +++L Y G +I++ E D
Sbjct: 330 LIHAYAVGRDMEEALSCVRKMKEEGIEMSL-VTYSILVGGFAKIADAEAAD--------- 379
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
H+ K Y ++ A C + + +AL+ EM G+ +
Sbjct: 380 -----HWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 434
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D GN E L + ++E G +P V++Y I + ++ ++ +A + + M+
Sbjct: 435 MMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 494
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I+ N+ TY L+ R L + AV++D+ K G
Sbjct: 495 IKHNMKTYSMLINGFVR---LKDWANAFAVFEDVVKDG 529
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 188/438 (42%), Gaps = 93/438 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP +I G G +++ AI+E+++ + +N L+ V A LK
Sbjct: 288 SPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEF 347
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M++ GV D +Y++L+ A AG A+ + +K +EA ++ + + +S I+
Sbjct: 348 IVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIV---LKEMEANNIMP-NSYVFSRIL 403
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D WQ + +V ++M ++GV P+ ++ +I+ ++ AM F++ML G +
Sbjct: 404 ASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQ 463
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ N L+ +A +RA LF ME
Sbjct: 464 PDTVTWNTLIDCHCKAELHERAEELFEEM----------------------MEK------ 495
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
F P TT+NI++ + + VK LM MR++GL PN
Sbjct: 496 -------------------GFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNV 536
Query: 549 ISWTILIDACGGSGNVEGALQIL-----------------------------------KI 573
+++T LID G SG A++ L ++
Sbjct: 537 VTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRL 596
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR D + P ++A + I +R +AFS+ + MK ++P++VTY TL++A R
Sbjct: 597 MRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDK 656
Query: 634 LHEVQQCLAVYQDMWKAG 651
++V +VY++M AG
Sbjct: 657 FNKVP---SVYEEMILAG 671
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 45/412 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L+ +N+L+N A +DL+ + + M++ G +D +Y+++
Sbjct: 166 RSEKLYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLI 225
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ + ++ + Q++Y E++ L+LDV + I+ FA A A++
Sbjct: 226 IQSLVRSNRIDSPILQKLYSEIQC----DKLELDVQLSNDIIVGFAKAGDPNKAMEFLGM 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ ++G++P T T ++I+A ++G + +A +FEEM G +P ++ N LL+ V+A
Sbjct: 282 VQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGM 341
Query: 449 FDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSIT----NTPNFVPNSHYS 503
A F + ++ V+ E Y D SN + I N +PNS+
Sbjct: 342 LKDA--EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVF 399
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+++ K C D+ ++M
Sbjct: 400 SRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDH--AMDTFDKM 457
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++W LID + E A ++ + M E G SP V + I +R
Sbjct: 458 LSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERW 517
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L M+ + PN+VTY TL+ + G + +CL +DM AG
Sbjct: 518 DDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECL---EDMKSAG 566
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 164/364 (45%), Gaps = 26/364 (7%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +Y +++ + L++ + N ++ A D +E +Q G+ A+ ++ A
Sbjct: 241 QKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISA 300
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+G + A+ I+ E+K LK Y+ ++K + A + A + +M +G
Sbjct: 301 LGDSGRIIEAEAIFEEMK----DNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSG 356
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V+P+ T+S LI+A +NAG E A + +EM PNS + +L + + ++ ++F
Sbjct: 357 VSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSF 416
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFS-- 510
++ + S + DR H I F H +FDK S
Sbjct: 417 QVLKEMKNSGVR----------PDR-----HFYNVMIDTFGKFSCLDHAMDTFDKMLSEG 461
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P T T+N L+ C + R + L EM G SP ++ I+I++ G +
Sbjct: 462 IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVK 521
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ MR G+ P+VV YTT I + +S R A E+MK ++P+ Y L+ A
Sbjct: 522 TLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAY 581
Query: 629 SRYG 632
++ G
Sbjct: 582 AQKG 585
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 140/311 (45%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN Y+ I+ G++ KS + +++++ V + + +N +++ L ++
Sbjct: 394 PNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDT 453
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C A A+E++ E+ KG V T++ ++
Sbjct: 454 FDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMME---KGFSPC-VTTFNIMIN 509
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + W + +M S G+ PN +T+++LI+ +G A+ E+M AG +P
Sbjct: 510 SFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFRL R+ +L + +AL + + + +D +
Sbjct: 570 SSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGE-----DRRDAE 624
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + + K KP TY LMKA + +V ++ EM G +P
Sbjct: 625 AFS----------VLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTP 674
Query: 547 NHISWTILIDA 557
+ + +L A
Sbjct: 675 DRKARAMLRSA 685
>gi|387219047|gb|AFJ69232.1| hypothetical protein NGATSA_2004410 [Nannochloropsis gaditana
CCMP526]
gi|422293010|gb|EKU20311.1| hypothetical protein NGA_2004410 [Nannochloropsis gaditana CCMP526]
gi|422293947|gb|EKU21247.1| hypothetical protein NGA_2004420 [Nannochloropsis gaditana CCMP526]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 197/461 (42%), Gaps = 67/461 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNI 291
KKR+ S R + ++ + P++ + I CG G + + ++ ++R+ + L
Sbjct: 426 KKRNGASHHRRH---QRLVPEPDLVTYHSAIKACGHAGQWEHALSLLAEVRAARWIELEP 482
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+ + A +F E +++ G +++ +YN ++AC G LA ++ +K
Sbjct: 483 STYNAAIAACAKSGRFN-EALDLLKECGDASNVVTYNSAMQACSSGGRPDLAFQLLQVMK 541
Query: 352 ----------------------------HLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ A GV + V TY+ ++ A W+ +L
Sbjct: 542 ANGVEPDVVSYTTVMQRSSVDVATSVLNRMRAAGV-SVGVMTYNALLNACAREGDWRTSL 600
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ E+M V PN +T++ + AC G + A+ + EM G +S+ C + C
Sbjct: 601 AMLEEMDHQSVAPNVVTYTLAMEACGRGGQWQAALEVLNEMTVRGVPLDSKACQTAIDVC 660
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ +++A L R + A G D G D+ S + +
Sbjct: 661 AKVQDWNKALSLLRDVS------AQGRDGIG-----------DQGSGKGGTKELYEKAMA 703
Query: 504 SFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+F + + +P N+ M+AC + L+ M + G++P+ S
Sbjct: 704 AFGRAGEWEKVLWLLEGMDRPDQKVTNLAMRACAQAGRWEEAVGLLQNMTSKGIAPDQWS 763
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ I AC +GN E AL++LK M ++G+ PDVV+YTTA+ C ++ + L EEM
Sbjct: 764 YNTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLRLLEEMV 823
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN ++ ++ A +G+ + + +AV M + G
Sbjct: 824 KKGVHPNHRSFNAIMSA---HGNAGQATEAIAVLGLMTEHG 861
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 104/487 (21%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-- 307
+L +P+ + RT++ C + A+ ++ +V ++ + ++ + A ++
Sbjct: 170 NLKAPSPLLVRTLLMACVNAESLPLALAV---VKMPHVHPSVQQYTLVIQICARQERWFE 226
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ + ++M+ G D+ +Y ++ C AG A + E+K + ++ D TY+
Sbjct: 227 AVRLLRDMRTRGAPPDLVAYTAVMDCCAKAGQWEAALTLIPEMK----EAGVRPDRITYN 282
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T + A WQ AL+ M PN I+++S +++CA G ++A+ L EEM QA
Sbjct: 283 TAIDACAKGGQWQRALEFLRGMEE----PNLISYNSALDSCAKTGRWKEAVGLLEEMRQA 338
Query: 428 G-------------------------------------CEPNSQCCNILLQACVEACQFD 450
G PN N ++AC + +F+
Sbjct: 339 GRRKDGRGSTVSDQTQEVGANQGNTTNTIPGNRGSKPSIRPNIISYNTAIEACAKRGRFE 398
Query: 451 RAFRLFRSWTLSKTQVALGEDY--DGNTDRISNMEHKDKQSITNTPNFVPN-------SH 501
A + RS + T+ A G + R H+ Q + P+ V H
Sbjct: 399 EALAILRSMQVPDTEKAGGHVPLPSASKKRNGASHHRRHQRLVPEPDLVTYHSAIKACGH 458
Query: 502 YSSFDKRFSF----------KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ S + +TYN + AC R ++ ++ G + N +++
Sbjct: 459 AGQWEHALSLLAEVRAARWIELEPSTYNAAIAACAKSG-RFNEALDLLKECGDASNVVTY 517
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-------------------- 591
+ AC G + A Q+L++M+ +G+ PDVV+YTT ++
Sbjct: 518 NSAMQACSSGGRPDLAFQLLQVMKANGVEPDVVSYTTVMQRSSVDVATSVLNRMRAAGVS 577
Query: 592 -----------VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
C R + + ++ EEM H + PN+VTY + A R G + Q
Sbjct: 578 VGVMTYNALLNACAREGDWRTSLAMLEEMDHQSVAPNVVTYTLAMEACGRGG---QWQAA 634
Query: 641 LAVYQDM 647
L V +M
Sbjct: 635 LEVLNEM 641
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 145/379 (38%), Gaps = 67/379 (17%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
+++ C GD+ S A+ E++ Q+V N+ + M + LEV M G
Sbjct: 586 LLNACAREGDWRTSLAMLEEMDHQSVAPNVVTYTLAMEACGRGGQWQAALEVLNEMTVRG 645
Query: 320 VMADMASYNILLKACCLAGN---------TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V D + + C + V AQ G KG K Y +
Sbjct: 646 VPLDSKACQTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTK---ELYEKAM 702
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A W+ L + E M P+ + + ACA AG E+A+ L + M G
Sbjct: 703 AAFGRAGEWEKVLWLLEGM----DRPDQKVTNLAMRACAQAGRWEEAVGLLQNMTSKGIA 758
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N + AC +A ++A +L + +G++
Sbjct: 759 PDQWSYNTAIHACAQAGNAEKALKLLKE---------MGQE------------------- 790
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
P +Y M AC + D L+ EM G+ PNH
Sbjct: 791 -------------------GVVPDVVSYTTAMDACASVGDVETSLRLLEEMVKKGVHPNH 831
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ ++ A G +G A+ +L +M E G++PDV +YT A+ +C+R + A + E
Sbjct: 832 RSFNAIMSAHGNAGQATEAIAVLGLMTEHGLTPDVKSYTLAMDICLRQGLWQVALKIVER 891
Query: 609 MKHYQIQPNLVTYITLLRA 627
M +++ + ++Y + A
Sbjct: 892 MHATRVRFDAISYGKAIHA 910
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 32/317 (10%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNV------------TLNIYVFNSLMNVNAHDLK 306
C+T IDVC D+ K+ ++ D+ +Q T +Y A + +
Sbjct: 653 CQTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTKELYEKAMAAFGRAGEWE 712
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L + + M + D N+ ++AC AG +E G ++++ +KG+ D ++Y
Sbjct: 713 KVLWLLEGMDR----PDQKVTNLAMRACAQAGRW---EEAVGLLQNMTSKGIAP-DQWSY 764
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + A A + ALK+ ++M GV P+ +++++ ++ACA+ G VE ++ L EEM++
Sbjct: 765 NTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLRLLEEMVK 824
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN + N ++ A A Q A + T+ L D T M+
Sbjct: 825 KGVHPNHRSFNAIMSAHGNAGQATEAIAVLG----LMTEHGLTPDVKSYT---LAMDICL 877
Query: 487 KQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+Q + V H + R F + I + ++EM G
Sbjct: 878 RQGLWQVALKIVERMHAT----RVRFDAISYGKAIHAAHLGEQWEVAVGFLDEMVESGWL 933
Query: 546 PNHISWTILIDACGGSG 562
P+H S+T++++AC +G
Sbjct: 934 PSHKSYTLVVEACRRAG 950
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ Y ++++ C ++ L+ +MRT G P+ +++T ++D C +G E AL +
Sbjct: 206 PSVQQYTLVIQICARQERWFEAVRLLRDMRTRGAPPDLVAYTAVMDCCAKAGQWEAALTL 265
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M+E G+ PD + Y TAI C + + ++A M+ +PNL++Y + L + ++
Sbjct: 266 IPEMKEAGVRPDRITYNTAIDACAKGGQWQRALEFLRGME----EPNLISYNSALDSCAK 321
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G E + + ++M +AG
Sbjct: 322 TGRWKEA---VGLLEEMRQAG 339
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+P+ + T I C G+ K+ + +++ + V ++ + + M+ A D++ +L
Sbjct: 758 APDQWSYNTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYTTAMDACASVGDVETSLR 817
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M K GV + S+N ++ A AG A + G L + L DV +Y+ +
Sbjct: 818 LLEEMVKKGVHPNHRSFNAIMSAHGNAGQATEAIAVLG----LMTEHGLTPDVKSYTLAM 873
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ WQ+ALK+ E M + V + I++ I+A E A+ +EM+++G
Sbjct: 874 DICLRQGLWQVALKIVERMHATRVRFDAISYGKAIHAAHLGEQWEVAVGFLDEMVESGWL 933
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + ++++AC A + A + R W K +A G +++ +D +
Sbjct: 934 PSHKSYTLVVEACRRAGESRLAEEVSRRWARDKESLARANRRRGGKG-LADTRRRDNRGK 992
Query: 491 TNT 493
+N+
Sbjct: 993 SNS 995
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 112/293 (38%), Gaps = 66/293 (22%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L LD + IV A + + A+K +LS P+ + +L+ AC NA + A+
Sbjct: 141 LLLDDERQAAIVSKLAKEGYLKQAVK----LLSNLKAPSPLLVRTLLMACVNAESLPLAL 196
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGNT 476
+ + P+ Q +++Q C ++ A RL R +T+ A + Y
Sbjct: 197 AVVK---MPHVHPSVQQYTLVIQICARQERWFEAVRLLRD---MRTRGAPPDLVAYTAVM 250
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D + + ++T P K +P TYN + AC + R
Sbjct: 251 DCCAKAGQWEA-ALTLIPEM----------KEAGVRPDRITYNTAIDACAKGGQWQRALE 299
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG---------------- 578
+ M PN IS+ +D+C +G + A+ +L+ MR+ G
Sbjct: 300 FLRGME----EPNLISYNSALDSCAKTGRWKEAVGLLEEMRQAGRRKDGRGSTVSDQTQE 355
Query: 579 ---------------------MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ P++++Y TAI+ C + R ++A ++ M+
Sbjct: 356 VGANQGNTTNTIPGNRGSKPSIRPNIISYNTAIEACAKRGRFEEALAILRSMQ 408
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ + L+ AC + ++ AL ++K+ + P V YT I++C R +R +A
Sbjct: 173 APSPLLVRTLLMACVNAESLPLALAVVKMPH---VHPSVQQYTLVIQICARQERWFEAVR 229
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +M+ P+LV Y ++ ++ G + + L + +M +AG
Sbjct: 230 LLRDMRTRGAPPDLVAYTAVMDCCAKAG---QWEAALTLIPEMKEAG 273
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 202/449 (44%), Gaps = 44/449 (9%)
Query: 237 LVSALRAYD-------ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
L+ A R YD + +K + + + T+I + G K+ +
Sbjct: 4 LLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRP 63
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
Y ++S++ V D++ L +YK M K + D ++NIL+ + A A ++
Sbjct: 64 TAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVF 123
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + DV+TY+ +++ +K+ E M + G PN T+ S+++A
Sbjct: 124 GDMFKLN----VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
+AG V++A +F++M+Q G +P++ NIL+ A + Q +RAF RS+T T
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT 239
Query: 465 QVALGEDYDGNTDRISNME----HKDKQSITNTPNF---------------VPNSHYSSF 505
+L D ME K K ++N + V +
Sbjct: 240 YNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMV 299
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSG 562
D + T N+L C + RV+A L +M+ GL+ + +++ ILI+ G +G
Sbjct: 300 DNDIKYDIVTIN-NVL--DCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A +L M E+G +P+++ Y T I + L A LF EMK + PN+V+Y
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYS 416
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ +G ++++++M G
Sbjct: 417 SLIEG---FGKAGRTDAAISLFREMKAEG 442
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 191/467 (40%), Gaps = 66/467 (14%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + +G+ + AL+ A K P Y ++I V GD +Y+ +
Sbjct: 32 LFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQM 91
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ FN L++ A ++ V+ +M KL V D+ +Y IL+++ G
Sbjct: 92 LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRI 151
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ + + A+G + ++FTY +++ F A A + + M+ G+ P+ +T
Sbjct: 152 DAVMKLF---ESMTAQGC-QPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVT 207
Query: 401 WSSLINACANAGLVEQA--------------------------------MHLFEEMLQAG 428
++ LI+A G +E+A M LF +M G
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG 267
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N IL++ A + + ++L+ + + N D
Sbjct: 268 LVSNELTYAILIERLGWAGRVEDVWQLY-------------------LEMVDNDIKYDIV 308
Query: 489 SITNTPNFVPNSH-----YSSF-DKRF-SFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+I N + + + + F D +F T TYNIL+ AL+ EM
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G +PN I++ LI + G N+ A ++ M+E G++P+VV+Y++ I+ ++ R
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A SLF EMK PN VTY L+ R G + L +D
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 167/401 (41%), Gaps = 47/401 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP++Y +I G G ++E + +Q N++ ++S+M+ +A + +
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M + G+ D +YNIL+ A G A + G+ + + TY++++
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE-------VTYNSLL 244
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
Q +++ M + G+ N +T++ LI AG VE L+ EM+ +
Sbjct: 245 SSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIK 304
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N +L +A + + AF LF+ +M+ K +
Sbjct: 305 YDIVTINNVLDCLSKAGRVEAAFELFQ-----------------------DMKFKGLNAD 341
Query: 491 TNTPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMN 537
T T N + N D + P TYN L+ + ++ L
Sbjct: 342 TVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFL 401
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ G++PN +S++ LI+ G +G + A+ + + M+ +G P+ V Y I +R+
Sbjct: 402 EMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAG 461
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
R A EM+ Q VT L+R +Y + E Q
Sbjct: 462 RFGAAMEYLREMRDAGCQMGKVTKSLLVRIPPQY--MEEAQ 500
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 56/357 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ +ID G G RA +S++ T N +NSL++ D++ +E+
Sbjct: 203 PDAVTYNILIDAFGKTGQL--ERAFDFVGKSRSFT-NEVTYNSLLSSLGRKGDIQGLMEL 259
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G++++ +Y IL++ AG ++Y E+ + +K D+ T + ++
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND----IKYDIVTINNVLD 315
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + A ++ +DM G+ +T+T++ LIN AG ++ A L EM + GC P
Sbjct: 316 CLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAP 375
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ + + A RLF +E K++
Sbjct: 376 NIITYNTLISSYGKWSNLSAATRLF-------------------------LEMKERGV-- 408
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
PN V YSS + F KA TD +L EM+ G PNH+++
Sbjct: 409 -APNVVS---YSSLIEGFG------------KAGRTD--AAISLFREMKAEGCPPNHVTY 450
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+LID +G A++ L+ MR+ G V T ++ V + + +++A S F+E
Sbjct: 451 NLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKV--TKSLLVRIPPQYMEEAQSFFQE 505
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ + + + G+K D+ + + K N +I+ G G +Y
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ +I N++++ A ++ E++++M+ G+ AD +YNIL+ AG
Sbjct: 297 EMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTP 396
A + E +E G ++ TY+T++ + KW + A ++ +M GV P
Sbjct: 357 KLDAAGALLLE---MEENGCAP-NIITYNTLISSYG--KWSNLSAATRLFLEMKERGVAP 410
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +++SSLI AG + A+ LF EM GC PN N+L+ + A +F A
Sbjct: 411 NVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYL 470
Query: 457 R 457
R
Sbjct: 471 R 471
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 195/433 (45%), Gaps = 23/433 (5%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + + F K DL AL + S T+I G CG ++ AI+E++
Sbjct: 273 LWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEM 332
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V A L+ V M++ GV+ + +Y++L+ A GN
Sbjct: 333 RDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY---GNA 389
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ +K +EA V + + + +S I+ + D WQ +V +M +GV P+ I
Sbjct: 390 ERWESARIVLKEMEASNV-QPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIF 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ LI+ ++ AM F+ ML G EP++ N L+ +A + DRA LF
Sbjct: 449 YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEE-M 507
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K + ++ + + E D + N + N + P TY
Sbjct: 508 MEKGYLPCNTTFNIMINSFGDQERWD-----DVKNLLTNM------RSQGLLPNAVTYTT 556
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A+ +++M+ GL P+ + L++A G + A+ MR+DG
Sbjct: 557 LIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDG 616
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P ++A + I + +R +AF + + MK ++P++VTY TL++A +V
Sbjct: 617 LKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVP 676
Query: 639 QCLAVYQDMWKAG 651
+VY++M +G
Sbjct: 677 ---SVYEEMILSG 686
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 183/412 (44%), Gaps = 45/412 (10%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ L +N+L++ A +D++ L + M++ G +D+ +Y+++
Sbjct: 181 QSEKLYEAFLLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLI 240
Query: 331 LKACCL--AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ N+ + Q+IY E+ + L++DV ++ I+ FA A AL+
Sbjct: 241 IRSLMKNNRANSSILQKIYREID----RDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGV 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ +G++ T T ++I N G E+A +FEEM G +P ++ N LL+ V+A
Sbjct: 297 VQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGL 356
Query: 449 F-DRAF---RLFRSWTLSKTQV-ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
D F + RS L Q +L D GN +R + K+ N PN++
Sbjct: 357 LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKE--MEASNVQPNAYVF 414
Query: 504 S-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMNEM 539
S + K F +P YN+L+ K C D+ A + M
Sbjct: 415 SRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH--AMATFDRM 472
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ I+W L+D +G + A ++ + M E G P + I +R
Sbjct: 473 LSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERW 532
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L M+ + PN VTY TL+ + G + +CL DM AG
Sbjct: 533 DDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECL---DDMKAAG 581
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D +F N + FGK L A+ +D P+ T++D G + ++
Sbjct: 443 RPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEE 502
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++E++ M+K G + ++NI++
Sbjct: 503 LFEEM--------------------------------MEK-GYLPCNTTFNIMI------ 523
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + +VK+L ++G+L + TY+T++ ++ + + A++ +DM +AG
Sbjct: 524 -NSFGDQERWDDVKNLLTNMRSQGLLP-NAVTYTTLIDIYGKSGRFDDAIECLDDMKAAG 581
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ P++ +++L+NA A GL +QA+ F M G +P+ N L+ A
Sbjct: 582 LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINA 630
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 173/370 (46%), Gaps = 32/370 (8%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F + + M KLG+ +++N L+ C G A
Sbjct: 119 VTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ E+ + + +V +Y+TI+ MA+ V + M G P+ +T++++
Sbjct: 179 ELFNEM----VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM EML G PN N ++ Q + A RLF+
Sbjct: 235 IDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM----- 289
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G D +T ++ + + K+ + + V + + ++ +P +TYN LM
Sbjct: 290 ---VGRDVMPDTVTLTILVDGLCKEGMVSEARLV----FETMTEK-GVEPNISTYNALM- 340
Query: 524 ACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
D Y ++ LMNE + V G +P S+ ILI+ S ++ A +L M
Sbjct: 341 ----DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++PD V Y+T ++ + R K+A ++F+EM Y + PNLVTY LL ++G L E
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456
Query: 637 VQQCLAVYQD 646
+ L Q+
Sbjct: 457 ALKLLKSMQE 466
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 172/369 (46%), Gaps = 37/369 (10%)
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N N +K +E++ M + G ++ SYN ++ C GNT +A +++ K
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVF---K 217
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E G K DV TY+TI+ + A++ +ML G+ PN T++ +++
Sbjct: 218 KMEQNGC-KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCIL 276
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G + +A LF+EM+ P++ IL+ + A +F + T + +
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNI-ST 335
Query: 472 YDGNTD-----RISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF---------------- 509
Y+ D R+ N E K I P H Y+ F
Sbjct: 336 YNALMDGYCLQRLMN-EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEM 394
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGN 563
+ P T TY+ LM+ C + R K +N EM + GL PN ++++IL+D G+
Sbjct: 395 YHKALNPDTVTYSTLMQGLC-QFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ AL++LK M+E + P++V +T I+ + +L+ A LF ++ I+P + TY
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513
Query: 624 LLRARSRYG 632
+++ + G
Sbjct: 514 MIKGLLKEG 522
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 55/323 (17%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG-EVKHLEAKGVLKLDVFTYSTI 369
V++ M + GV ++++YN L+ CL A++++ ++ A GV +Y+ +
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV-----HSYNIL 374
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F ++ A + +M + P+T+T+S+L+ G ++A+++F+EM G
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN +ILL + D A +L +S K +
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE------------------------ 470
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPN 547
PN V H++ IL++ K L +++ G+ P
Sbjct: 471 ----PNIV---HHT----------------ILIEGMFIAGKLEVAKELFSKLFADGIRPT 507
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T++I G + A + + M +DG P+ +Y I+ ++++ A L +
Sbjct: 508 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 567
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM + NL T+ LL S+
Sbjct: 568 EMVGKRFSANLSTFQMLLDLESQ 590
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 125/349 (35%), Gaps = 63/349 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V + + FA K + + + M GVT N + + LIN V+ A+ +
Sbjct: 88 VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILG 147
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDG 474
+M + G P + N L+ + A LF +S + G G
Sbjct: 148 KMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTG 207
Query: 475 NT----DRISNMEHKDKQSITNTPNFVPNS-----------HYSSFDKRFSFKPTTTTYN 519
NT D ME + T N + +S + S P TYN
Sbjct: 208 NTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYN 267
Query: 520 ILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C L EM + P+ ++ TIL+D G V A + + M E
Sbjct: 268 CMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK 327
Query: 578 GMSPDVVAYTT----------------AIKVCVR-------------------SKRLKQA 602
G+ P++ Y ++ +R S+R+ +A
Sbjct: 328 GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEA 387
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SL EM H + P+ VTY TL++ ++G ++ L ++++M G
Sbjct: 388 KSLLAEMYHKALNPDTVTYSTLMQGLCQFG---RPKEALNIFKEMCSYG 433
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++K M G++ ++ +Y+ILL C G+ A ++ +K ++ K L+ ++
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL---LKSMQEKK-LEPNIVH 475
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ +++ A ++A ++ + + G+ P T++ +I GL ++A LF +M
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G PNS N+++Q ++ A RL
Sbjct: 536 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 183/438 (41%), Gaps = 65/438 (14%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + +R F G+K D + Y + P++ + T +D G+ K RAI
Sbjct: 491 IIYTSLIRNFFMHGRKED---GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED++S ++ ++ L++ A + T +++ M + G D +YN ++ C
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607
Query: 337 AGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G A E+ E VKH+ V TY +IV A A + E+ S G+
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPT------VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
N I +SSLI+ G +++A + EEM++ G PN N L+ A V+ + D A
Sbjct: 662 ELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI 721
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F+S K P
Sbjct: 722 CFQSM-----------------------------------------------KEMKCSPN 734
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TY+IL+ C Y + EM+ GL PN +++T +I GN+ A + +
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ +G PD ++ I+ + R +A+ +FEE + + N+ T I+LL A ++
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854
Query: 633 SLHEVQQCLAVYQDMWKA 650
L + AV ++ K+
Sbjct: 855 CLEQAAIVGAVLSEIAKS 872
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 192/440 (43%), Gaps = 42/440 (9%)
Query: 211 IRYACIVPRADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
++ +C+ P DI+ N + FGK + A + + K H P+ +++ V
Sbjct: 237 VKGSCLEP--DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKA 294
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMAS 326
G ++ ++ + ++ Y +N+++ +F + YK +++L G + + S
Sbjct: 295 GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD-DAYKLLERLRERGCIPSVVS 353
Query: 327 YNILLKACCLAGNTVLAQEI-YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+N +L CL + + + +V +AK ++ TY+ I+ + A A K+
Sbjct: 354 FNSIL--TCLGKKRKVDEALTLFDVMKKDAKP----NISTYNIIIDMLCMAGRVNEAYKI 407
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++M AG+ PN ++ + +++ A +E+A +FE + GC PNS L+ +
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGN----TDRISNM-EHKDKQSITNTPNFVPNS 500
+ D A+RLF L +D N T I N H K+ +
Sbjct: 468 KGKIDDAYRLFEKM--------LDAGHDANPIIYTSLIRNFFMHGRKE----------DG 509
Query: 501 H--YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
H Y +R +P T N M + + +A+ +M++ G P+ S++ILI
Sbjct: 510 HKIYKEMIRRGG-RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G I + M + G + D AY + +S ++ +A+ + EEMK + P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628
Query: 617 NLVTYITLLRARSRYGSLHE 636
+ TY +++ ++ L E
Sbjct: 629 TVATYGSIVDGLAKIDRLDE 648
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 184/448 (41%), Gaps = 66/448 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG---------DYMKSRAIYED 281
GKKR + AL +D KK + PN+ IID+ + G D M+ ++ +
Sbjct: 361 LGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 282 LRSQNVTLN-------------IYVFNSLMNVNAHDLKF---------------TLEVYK 313
L S N+ ++ I+ S N + + + +++
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M G A+ Y L++ + G +IY E+ + L L +T +
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL----LNTYMDCV 535
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A + + EDM S G P+ ++S LI+ AG + ++F+ M Q G ++
Sbjct: 536 FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA 595
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+ N ++ ++ + D+A+ + + + Y D ++ ++ D+
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT-YGSIVDGLAKIDRLDEA----- 649
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY----RVKA---LMNEMRTVGLSP 546
Y F++ K N+++ + D + R+ ++ EM GL+P
Sbjct: 650 --------YMLFEEA---KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 698
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +W L+DA + ++ AL + M+E SP+ Y+ I R ++ +AF +
Sbjct: 699 NVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 758
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSL 634
+EM+ + PN+VTY T++ ++ G++
Sbjct: 759 QEMQKQGLIPNVVTYTTMISGLAKVGNI 786
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 144/351 (41%), Gaps = 63/351 (17%)
Query: 294 FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------AQEI 346
+N+++ +HDL +V + M LG Y + AC T++ A +
Sbjct: 111 YNAVLPFLSHDLAALEKVLEEMSHLG-------YGLPNPACAALVATLVRSRRLEDAFRV 163
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
G ++HL+ + Y+ ++ A+A+ + AL++ M G + +++L+
Sbjct: 164 IGAMRHLKFRPPFS----AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVR 219
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-------- 458
A A G +E A+ L +E+ + EP+ N+ + +A D A++ F
Sbjct: 220 ALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRP 279
Query: 459 ---------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
W L K LGE + ME + N + + S+ +RF
Sbjct: 280 DDVSYTSMVWVLCKAG-RLGE----AEELFGQMEAERDVPCAYAYNTMIMGYGSA--ERF 332
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
D Y+ L+ +R G P+ +S+ ++ G V+ AL
Sbjct: 333 D-----------------DAYK---LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALT 372
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+ +M++D P++ Y I + + R+ +A+ + +EM+ + PNL++
Sbjct: 373 LFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F+P + Y +L+ A R L+ +M+ VG + +T L+ A G +
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E AL ++ ++ + PD+V Y I ++ + A+ F E+K + ++P+ V+Y ++
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287
Query: 625 LRARSRYGSLHEVQQ 639
+ + G L E ++
Sbjct: 288 VWVLCKAGRLGEAEE 302
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL++E++ L P+ + + + ID G +G+V+ A + ++ G+ PD V+YT+ + V
Sbjct: 232 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVL 291
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ RL +A LF +M+ + P Y T++ YGS + + + + G
Sbjct: 292 CKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG---YGSAERFDDAYKLLERLRERG 346
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D +RV + MR + P ++T+LI A + E AL++L+ M++ G V +T
Sbjct: 159 DAFRV---IGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFT 215
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
T ++ R +++ A +L +E+K ++P++V Y + + GS+
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 180/386 (46%), Gaps = 29/386 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ + +Y ++ V+ N+Y +N L+ + +L+ L + M++ G + ++ +YN L
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL 255
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G E +G +K + +KG ++ ++ +Y+ I+ + A ++ E+M
Sbjct: 256 IDAYCKMGRI---DEAFGLLKSMSSKG-MQPNLISYNVIINGLCREGSMKEAWEILEEMG 311
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G TP+ +T+++L+N G QA+ + EM++ G P+ L+ + +A +
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 451 RAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
RA F R L + DG + +Q + N + N S
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFS----------RQGLLNEAYRILNEMTES--- 418
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F P+ TYN + C +AL + EM GL+P+ +S++ +I G ++
Sbjct: 419 --GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M E G+SPD V Y++ I+ +RL +A L +EM + P+ TY TL+
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
A G L+ + L ++ +M G
Sbjct: 537 NAYCVEGDLN---KALHLHDEMIHKG 559
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 36/411 (8%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F +L L + +++ PN+ T+ID G ++ + + + S+
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N+ +N ++N +K E+ + M G D +YN LL C GN A
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I+ E+ + + V TY+ ++ A+ A++ + M G+ PN T+++L
Sbjct: 340 VIHAEM----VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW----- 459
I+ + GL+ +A + EM ++G P+ N + + + A + +
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455
Query: 460 ---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S + + G G DR M KQ + P
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQM----KQEMVEK----------------GVSPDAV 495
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ C +A L EM +GL P+ ++T LI+A G++ AL + M
Sbjct: 496 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 555
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G PD V Y+ I + R ++A L ++ + + P+ VTY TL+
Sbjct: 556 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 154/383 (40%), Gaps = 63/383 (16%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASY 327
D M+ R + + R+ ++ + L+N E Y+ M + G + +Y
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLN----------EAYRILNEMTESGFSPSVVTY 427
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N + C+ +E G V+ + KG L DV +YSTI+ F A ++K+
Sbjct: 428 NAFIHGHCVLERM---EEALGVVQEMVEKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
+M+ GV+P+ +T+SSLI + +A L +EML G P+ L+ A CVE
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
L ++ L + G D T + + +KQ+ T
Sbjct: 544 -------DLNKALHLHDEMIHKGFLPDAVTYSVL-INGLNKQARTREA------------ 583
Query: 507 KRFSFK-------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
KR FK P+ TY+ L++ C ++ S LI
Sbjct: 584 KRLLFKLIYEESVPSDVTYDTLIENCSNIEFK------------------SVVALIKGFC 625
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + A ++ + M E P Y I R L +AF+L++EM H P+ V
Sbjct: 626 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 685
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
T ITL++A + G E+ + +
Sbjct: 686 TVITLIKALFKEGMNEEMSEVIG 708
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 164/406 (40%), Gaps = 52/406 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K R+L A+ +D + PN T+ID G ++ I +
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ +N+ ++ + ++ L V + M + G+ D+ SY+ ++ C G
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E + KGV D TYS++++ + + A + ++ML G+ P+
Sbjct: 475 LDRAFQMKQE---MVEKGV-SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LINA G + +A+HL +EM+ G P++ ++L+ + + A RL
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKP 513
++ V YD + SN+E K ++ F D+ F + KP
Sbjct: 591 IYEES-VPSDVTYDTLIENCSNIEFKSVVALIK--GFCMKGLMHEADRVFESMVERNHKP 647
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC------------- 558
YN+++ C KA L EM G P+ ++ LI A
Sbjct: 648 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707
Query: 559 ----------------------GGSGNVEGALQILKIMREDGMSPD 582
GN+E L +L M +DG+ P+
Sbjct: 708 GDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK----ALMNEMRTVGLSPNHISWTILIDACGGSG 562
K F P +YN ++ A VK + EM +SPN ++ ILI G
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVG 228
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ L M +G P+VV Y T I + R+ +AF L + M +QPNL++Y
Sbjct: 229 ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYN 288
Query: 623 TLLRARSRYGSLHEVQQCL 641
++ R GS+ E + L
Sbjct: 289 VIINGLCREGSMKEAWEIL 307
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 178/432 (41%), Gaps = 98/432 (22%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++ + + +G+ L A+ ++A K + PN+ + +ID C GDY + I+ +
Sbjct: 157 FVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIFRE 215
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q ++ + FN+L++ A+ + ++ M++ G+ D +YN L+ C G
Sbjct: 216 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ 275
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ L T+ K S+G+ P+ I
Sbjct: 276 -------------------MHLGAALMETMAK-------------------SSGIEPSVI 297
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S++I+ A GL +A+ LF+EM EP+ C N ++ FD A + R+
Sbjct: 298 TYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRA- 356
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
ME F TYN
Sbjct: 357 ----------------------MEEA------------------------GFAKDIVTYN 370
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + + +L+ EM+ G SPN ++++ LIDA G A+ + + +++
Sbjct: 371 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDVV Y+T + C ++ +A +L EEM I+PN++TY +LL A R
Sbjct: 431 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR------- 483
Query: 638 QQCLAVYQDMWK 649
QCL V ++ K
Sbjct: 484 -QCLMVRKNFPK 494
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 69/436 (15%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+++ ++I G G K+ I+E ++ N+ V+N++++ D L ++
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIF 213
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + G+ D ++N L+ A A I+ E +E +G+ + DV TY+T++
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE---MEERGIARDDV-TYNTLIAT 269
Query: 373 FADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + E M S+G+ P+ IT+S++I+ A GL +A+ LF+EM EP
Sbjct: 270 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQ 488
+ C N ++ FD A + R+ + +D Y+ D + K ++
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRA----MEEAGFAKDIVTYNALLDSYGK-QGKFRE 384
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSP 546
+++ K+ P TY+ L+ A C + AL +++ GL P
Sbjct: 385 AMSLLEEM----------KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 434
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS---------- 596
+ + ++ L+D C +G+ + AL +L+ M ++G+ P+V+ Y + + R
Sbjct: 435 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPK 494
Query: 597 --------------------------KRLKQAFSL-----FEEMKHYQIQPNLVTYITLL 625
+ KQA L F EM ++PN+VT+ ++L
Sbjct: 495 LRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSIL 554
Query: 626 RARSRYGSLHEVQQCL 641
A S S+ + L
Sbjct: 555 NACSHCASVEDASSLL 570
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 17/292 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF YS+++ + + A+++ E M PN + ++++I+AC+ G A+ +F
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 213
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EML+ G P+ N L+ A A +++ R+F + + +A +D NT I+
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE--MEERGIAR-DDVTYNT-LIAT 269
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM 539
+ + + + K +P+ TY+ ++ A + AL EM
Sbjct: 270 YCRGGQMHLGA-------ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 322
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R + P+ I + ++D GN + A I + M E G + D+V Y + + +
Sbjct: 323 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 382
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A SL EEMK PN++TY L+ A ++G H + +A++QD+ KAG
Sbjct: 383 REAMSLLEEMKQRGASPNILTYSALIDAYCKHG-FH--RDAMALFQDVKKAG 431
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 54/399 (13%)
Query: 217 VPRADILFCNFVREF--GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ R D+ + + + G + L +AL A + P++ T+ID G +
Sbjct: 256 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE-PSVITYSTMIDGYAKLGLAHE 314
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ A+++++R+QNV + +N++++++A F + + M++ G D+ +YN LL
Sbjct: 315 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 374
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ G A + E+K A ++ TYS ++ + + + A+ + +D+ A
Sbjct: 375 SYGKQGKFREAMSLLEEMKQRGASP----NILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ + +S+L++ C G ++A+ L EEM G PN N LL A C R
Sbjct: 431 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRK 490
Query: 453 -FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F R + L + + L D D+ S ++ K KQ++
Sbjct: 491 NFPKLRFFLLPRVTMLLKPSVD--YDQQSLVDPKQKQAL--------------------- 527
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+L A + EM G+ PN ++++ +++AC +VE A +L
Sbjct: 528 --------VLAAA---------RVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLL 570
Query: 572 KIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ MR DG V T + + R + + A +LF E+
Sbjct: 571 EAMRVFDGR---VYGVTHGLLMGFRIRVWRDAETLFNEL 606
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 182/421 (43%), Gaps = 56/421 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + + R AL ++ K+ P++ IID+ G G + ++E++
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEM 179
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + Y +N+ + A + E++ M+ D +YN LL AG
Sbjct: 180 KAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAG-- 237
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
E +K +E+ G L ++ TY+ ++ F A A ++K+ M+S G+ P+ T
Sbjct: 238 -WYNEAANVLKEMESAGCLP-NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT 295
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++A + AG VEQAM ++ +M + C PNS N L+ + F +F
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF---- 351
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+D Q+ P+ V T+N
Sbjct: 352 ------------------------EDMQACGVEPDIV-------------------TWNS 368
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A + Y V + M+ G P+ ++ ILI+A G G+ + AL I M + G
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PD+ + T + R R + A + +E+ +PN + Y ++L A + G L +++
Sbjct: 429 CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLK 488
Query: 639 Q 639
+
Sbjct: 489 E 489
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 185/418 (44%), Gaps = 37/418 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+++ +++ G ++ IY +R+ N T N + FN+L+ ++ + F+ + +
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++MQ GV D+ ++N LL A G + E+ + ++ G + D T++ +++
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAF---GKNGMYSEVLKVFRGMKKAG-FEPDKATFNILIE 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + + ML AG TP+ T+++L+ A A G E A + +E+ ++ +P
Sbjct: 407 AYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKP 466
Query: 432 NSQCCNILLQACVEACQFDRAFR---------------LFRSWTLSKTQVALGEDYDGNT 476
N +L A + ++ L +++ L ++ +L D
Sbjct: 467 NDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSL---VDEAE 523
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSS--FDK---------RFSFKPTTTTYNILMKAC 525
D M H S T+T N + + + DK +P TYN LM
Sbjct: 524 DAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMY 583
Query: 526 CTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ Y + +A + E G +P+ +S+ +I + G + A +I M +G+ PD
Sbjct: 584 GREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDS 643
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y T + V +A S+ + M +P+ VTY TL+ A + G EV++ L
Sbjct: 644 FTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 172/430 (40%), Gaps = 76/430 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + + + + A+ Y+ + +PN + +I + G ++ + I+ED++
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQ 355
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V +I +NSL+ + ++ L+V++ M+K G D A++NIL++A G++
Sbjct: 356 ACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSD 415
Query: 342 LAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A IY G+L+ D+ T++T++ A W+ A + +++ + PN
Sbjct: 416 QALSIY--------DGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Query: 398 TITWSSLINACANAG-----------------------------------LVEQAMHLFE 422
I ++S+++A AN G LV++A F
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVA----LGEDYDGN 475
M G ++ N ++ + D+A F L RS L V +G
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Query: 476 TDRISNMEHKDKQSITNTPNFVP----------NSHYSSFDKRF------SFKPTTTTYN 519
R ++ + TP+ V + SS + F +P + TYN
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYN 647
Query: 520 ILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ C + + +++ M G P+ +++ L+DA G E +ILK ++
Sbjct: 648 TFV-GCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Query: 577 DGMSPDVVAY 586
+ AY
Sbjct: 707 SDPNFSKAAY 716
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 51/291 (17%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D T + ++++ ++ + + G + ++SLI+A + ++A+
Sbjct: 78 FRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEAL 137
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
FE+M +AG +P+ N+++ D + RSW +
Sbjct: 138 GFFEQMKEAGPQPSLVTYNVII---------DLYGKKGRSW----------------ENI 172
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ E Q I +P TYN + AC + +A L
Sbjct: 173 LELFEEMKAQGI---------------------QPDEYTYNTAITACASGSLCEEATELF 211
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M++ +P+ +++ L+D G +G A +LK M G P++V Y + R+
Sbjct: 212 TQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRA 271
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
A + + M I+P++ TY +LL A SR G +V+Q + +Y M
Sbjct: 272 GLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAG---KVEQAMEIYNQM 319
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M+ G P+ +++ ++ID G G + E L++ + M+ G+ PD Y TAI
Sbjct: 138 GFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C ++A LF +MK P+ VTY LL + G +E L ++M AG
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVL---KEMESAG 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 535 LMNEMR-TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ N MR +V P+ ++ +++ G + ++ K +RE+G DV AYT+ I
Sbjct: 68 VFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISAL 127
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+++ K+A FE+MK QP+LVTY ++ + G E L ++++M G
Sbjct: 128 SRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE--NILELFEEMKAQG 183
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP IL FV + K + A A+ A + H + +I + G G K+
Sbjct: 499 VPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKAT 558
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ LRS + ++ +N LM + + +Y+ + L+ C
Sbjct: 559 DTFALLRSTGLEPDVVTYNCLMGMYGRE-----GMYRKCEAT------------LRECMA 601
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG T D+ +Y+T++ ++ A ++ +M+S G+ P
Sbjct: 602 AGQTP--------------------DLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQP 641
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ T+++ + N G+ +A+ + + M + GC+P+ L+ A + +F+ R+
Sbjct: 642 DSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
Query: 457 R 457
+
Sbjct: 702 K 702
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 118/312 (37%), Gaps = 68/312 (21%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC V + + + + FGK L+ + KK P+ +I+ G CG
Sbjct: 356 ACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSD 415
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT------------------------L 309
++ +IY+ + T ++ FN+L+ A + ++ L
Sbjct: 416 QALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475
Query: 310 EVYKN---MQKLGVMAD-------------MASYNILLKACCL---AGNTVLAQEIYGEV 350
Y N ++KL M D + ++ ++ C L A + LA +G +
Sbjct: 476 HAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYL 535
Query: 351 KHLEA----------KGV---------------LKLDVFTYSTIVKVFADAKWWQMALKV 385
KG+ L+ DV TY+ ++ ++ ++
Sbjct: 536 SDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEAT 595
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ ++AG TP+ ++++++I + + G + A +F EM+ G +P+S N + V
Sbjct: 596 LRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVN 655
Query: 446 ACQFDRAFRLFR 457
F A + +
Sbjct: 656 GGMFPEALSVVK 667
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 195/428 (45%), Gaps = 37/428 (8%)
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDL 282
CN EFGK DL +++ ++ P+ + T+I G+C G+ +R + ++
Sbjct: 56 CN-AGEFGKALDLFQSMK-----REKRVEPDRWTYNTLIS--GLCSSGNTEGARKLLSEM 107
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R +N+ N++ ++S++ V + + +V + M G D+ ++N +++ + N
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGVTPNT 398
A+E+Y +H+ G K D +Y ++ A +LK+ +M +AG PN
Sbjct: 168 EKAREVY---QHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+S+LI+ G +E+A+ +F ML+AGC+PN L+ A + +A LF
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 459 WT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + VA G R S M+ +K Y +PT
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGS-MDEAEK-------------LYREMSGGAGLQPTI 329
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ C R L+ EM T GL+ + ++ ILI + ++ AL++ K
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MRE D V+ + + ++ + QA+++FE + PN T+ L + + G
Sbjct: 390 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 449
Query: 634 LHEVQQCL 641
+ + Q+ +
Sbjct: 450 VEDAQKLM 457
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 165/371 (44%), Gaps = 55/371 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKAC 334
++E ++S++ ++ +N L+N NA + L+++++M++ V D +YN L+
Sbjct: 32 VFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGL 91
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C +GNT A+++ E++ + +VFTYS+I+K + + KV E+M++AG
Sbjct: 92 CSSGNTEGARKLLSEMRDKN----IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGC 147
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++ ++ A + +E+A +++ M+++G +P++ +IL+ + + D + +
Sbjct: 148 NPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 207
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + +VPN
Sbjct: 208 ILSEMAM------------------------------RAAGYVPN--------------- 222
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T++ L+ C KAL M G PN ++T LI + V A ++ +
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH-YQIQPNLVTYITLLRARSRY 631
M + + PD VAY + I + + +A L+ EM +QP +VT+ TL+ +
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342
Query: 632 GSLHEVQQCLA 642
G L + +A
Sbjct: 343 GKLGRANELVA 353
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 61/361 (16%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+V SL A L LEV++ M+ + + +YN+L+ + C AG A +++ +K
Sbjct: 15 FVVQSL--AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ D +TY+T++ + + A K+ +M + N T+SS+I +
Sbjct: 73 R---EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
E++ + EEM+ AGC P+ N ++Q + ++A +++ S
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES--------- 180
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---- 527
+KP +Y+IL+
Sbjct: 181 --------------------------------------GYKPDNVSYHILIHGLAKIGKL 202
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ ++ + M MR G PN I+++ LI +G +E AL++ M E G P+ Y
Sbjct: 203 DESLKILSEM-AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
TT I R++++ QA LFE+M I P+ V Y +L+ + GS+ E ++ +Y++
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK---LYRE 318
Query: 647 M 647
M
Sbjct: 319 M 319
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 175/426 (41%), Gaps = 98/426 (23%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++ + + +G+ L A+ ++A K + PN+ + +ID C GDY + I+ +
Sbjct: 156 FVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIFRE 214
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q ++ + FN+L++ A+ + ++ M++ G+ D +YN L+ C G
Sbjct: 215 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ 274
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ L T+ K S+G+ P+ I
Sbjct: 275 -------------------MHLGAALMETMAK-------------------SSGIEPSVI 296
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S++I+ A GL +A+ LF+EM EP+ C N ++ FD A + R+
Sbjct: 297 TYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRA- 355
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
ME F TYN
Sbjct: 356 ----------------------MEEA------------------------GFAKDIVTYN 369
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + + +L+ EM+ G SPN ++++ LIDA G A+ + + +++
Sbjct: 370 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDVV Y+T + C ++ +A +L EEM I+PN++TY +LL A R
Sbjct: 430 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR------- 482
Query: 638 QQCLAV 643
QCL V
Sbjct: 483 -QCLMV 487
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 17/292 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF YS+++ + + A+++ E M PN + ++++I+AC+ G A+ +F
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 212
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EML+ G P+ N L+ A A +++ R+F + + +A +D NT I+
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE--MEERGIAR-DDVTYNT-LIAT 268
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM 539
+ + + + K +P+ TY+ ++ A + AL EM
Sbjct: 269 YCRGGQMHLGA-------ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 321
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R + P+ I + ++D GN + A I + M E G + D+V Y + + +
Sbjct: 322 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 381
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A SL EEMK PN++TY L+ A ++G H + +A++QD+ KAG
Sbjct: 382 REAMSLLEEMKQRGASPNILTYSALIDAYCKHG-FH--RDAMALFQDVKKAG 430
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 175/399 (43%), Gaps = 54/399 (13%)
Query: 217 VPRADILFCNFVREF--GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ R D+ + + + G + L +AL A + P++ T+ID G +
Sbjct: 255 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE-PSVITYSTMIDGYAKLGLAHE 313
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ A+++++R+QNV + +N++++++A F + + M++ G D+ +YN LL
Sbjct: 314 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 373
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ G A + E+K A ++ TYS ++ + + + A+ + +D+ A
Sbjct: 374 SYGKQGKFREAMSLLEEMKQRGASP----NILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR- 451
G+ P+ + +S+L++ C G ++A+ L EEM G PN N LL A C R
Sbjct: 430 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRK 489
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F R + L + + L D+ S ++ K KQ++
Sbjct: 490 TFPKLRFFLLPRVTMLLKPSM--QDDQQSLVDPKQKQAL--------------------- 526
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+L A + EM G+ PN ++++ +++AC +VE A +L
Sbjct: 527 --------VLAAA---------RVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLL 569
Query: 572 KIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ MR DG V T + + R + + A +LF E+
Sbjct: 570 EAMRVFDGR---VYGVTHGLLMGFRIRVWRDAETLFNEL 605
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 181/391 (46%), Gaps = 69/391 (17%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
LR + S + S ++Y T+I CG ++ + ++RS+ + N++ +++LMNV
Sbjct: 261 LRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNV 320
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHLE 354
A++L +VYK M + G ++ +YNIL+ K C +E + LE
Sbjct: 321 CIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQW-------EEAVKVLDTLE 373
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K ++ +V TY+T++ + + ALKV E ML+AGV P+ T+++LI+A G V
Sbjct: 374 -KQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQV 432
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+A+ +F +M++ GCE N + L+ AC +A +++ A LF
Sbjct: 433 EKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELF------------------ 474
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
S M HK+ + KP T+N L+ AC + KA
Sbjct: 475 -----SKM-HKE-----------------------NCKPNVVTFNSLIAACSHGGHWEKA 505
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L +M+T G P+ I++ LI A G AL+ + M+ G PD + + ++V
Sbjct: 506 SELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEV 565
Query: 593 CVRS------KRLKQAFSLFEEMKHYQIQPN 617
+S + Q ++L H++I N
Sbjct: 566 LWQSGVLLAQSKALQLWTLANRSGHFRIYTN 596
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 23/335 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK--LDVFTYSTIVKVFADAKWWQ 380
D ++ LLK G A EI+ +++LE L D++TY+T++ + +
Sbjct: 234 DSSAMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLR 293
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M S G+ N T+S+L+N C A ++ A ++++ML+ GC PN NIL+
Sbjct: 294 RALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILI 353
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
V+ CQ++ A ++ TL K Q E NT + + +K Q P
Sbjct: 354 DVYVKRCQWEEAVKVLD--TLEK-QAIQAEVRTYNT--VISACNKSGQ---------PEQ 399
Query: 501 HYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILID 556
++K + KP+ TTY L+ A KAL +M G N I+++ LI
Sbjct: 400 ALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLIS 459
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
AC +G E AL++ M ++ P+VV + + I C ++A LFE+M+ +P
Sbjct: 460 ACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKP 519
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +TY L+ A R G + ++ L ++ M G
Sbjct: 520 DSITYCGLITAYERGG---QWRRALKAFEQMQTQG 551
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 157/359 (43%), Gaps = 55/359 (15%)
Query: 290 NIYVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++Y + ++++ +H L+ LE+ M+ G+ ++ +Y+ L+ C A LAQ++Y
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K + +G ++ TY+ ++ V+ W+ A+KV + + + T++++I+A
Sbjct: 335 ---KQMLEEGC-SPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISA 390
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C +G EQA+ ++E+ML AG +P++ L+ A + Q ++A +FR
Sbjct: 391 CNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFR---------- 440
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
D I R + TY+ L+ AC
Sbjct: 441 ---------DMI----------------------------RRGCERNVITYSSLISACEK 463
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ L ++M PN +++ LI AC G+ E A ++ + M+ G PD +
Sbjct: 464 AGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSIT 523
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y I R + ++A FE+M+ P+ + +L+ + G L + L ++
Sbjct: 524 YCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQLW 582
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ D +K + T+I C G ++ +YE + + V + + +L++
Sbjct: 365 AVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALIS 424
Query: 300 VNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ LE++++M + G ++ +Y+ L+ AC AG +A E++ ++ K
Sbjct: 425 AYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH----KE 480
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
K +V T+++++ + W+ A ++ E M + G P++IT+ LI A G +A
Sbjct: 481 NCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRA 540
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+ FE+M GC P++ N L++ ++ + + WTL+
Sbjct: 541 LKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQLWTLA 585
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 158/349 (45%), Gaps = 55/349 (15%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
++Y TII CG K+ + ++R V N++ +++LMNV A++L+ L+VY
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + G ++ +YNIL+ GN QE + LE +G K +V TY+TI+
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNW---QEAVQVLDALEDQGT-KPEVRTYNTILSA 187
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + AL+V E ML+ G P T+++LI+A G +E+A+ +F++M++ GCE N
Sbjct: 188 CNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERN 247
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ L+ AC +A ++ A L + H+D
Sbjct: 248 VITYSSLISACEKAGRWQLALELL------------------------DEMHRD------ 277
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ KP T T+N L+ AC + + + +M + G P+ +S
Sbjct: 278 -----------------NCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVS 320
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ ILI A ALQ L M+ G PDV Y I+ RS L
Sbjct: 321 YAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVL 369
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 55/366 (15%)
Query: 290 NIYVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++Y + ++++ +H L+ LE+ M+ GV+ ++ +Y+ L+ C A LA ++Y
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G+ L +G ++ TY+ ++ + WQ A++V + + G P T++++++A
Sbjct: 132 GQ---LLREGCTP-NLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSA 187
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C +G E A+ ++E ML G +P + L+ A + + + A R+F+
Sbjct: 188 CNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMV------- 240
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
R + TY+ L+ AC
Sbjct: 241 ----------------------------------------RRGCERNVITYSSLISACEK 260
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ L++EM PN +++ L+ AC G + A + + M G PD V+
Sbjct: 261 AGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVS 320
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I R + +A +EM+ +P++ Y ++ A +R G L + ++Q
Sbjct: 321 YAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQ 380
Query: 646 DMWKAG 651
+ G
Sbjct: 381 AATRQG 386
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L AL Y + +PN+ +ID+ G G++ ++ + + L Q +
Sbjct: 120 KANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVR 179
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N++++ + + L VY+ M G +Y L+ A G A I+ ++
Sbjct: 180 TYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDM 239
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +V TYS+++ A WQ+AL++ ++M PNT+T+++L++ACA
Sbjct: 240 ----VRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQ 295
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
G + A +FE+M GC+P++ IL+ A Q+ RA +
Sbjct: 296 GGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQ 339
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 528 DYYRVKALMNEMRTVGLS--------------PNH--------ISWTILIDACGGSGNVE 565
D + AL+ E+ VGLS NH ++T +I CG +
Sbjct: 31 DSRALAALLKELHKVGLSNRASELFDWLRSLPDNHELAHLCDVYTYTTIISQCGSHQQLR 90
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+++ MR G+ +V Y+ + VC+++ L+ A ++ ++ PNLVTY L+
Sbjct: 91 KALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILI 150
Query: 626 RARSRYGSLHEVQQCLAVYQD 646
+ G+ E Q L +D
Sbjct: 151 DIHGKMGNWQEAVQVLDALED 171
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 182/414 (43%), Gaps = 84/414 (20%)
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N F++L+N + K ++++ M K+G D+ +Y+ ++ C G+T +A ++
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL- 104
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS---- 403
+K +E KG K +V YSTI+ K A++ +M++ G++PN +T+SS
Sbjct: 105 --LKKMEEKGC-KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 404 -------------------------------LINACANAGLVEQAMHLFEEMLQAGCEPN 432
L++ + G++ +A +FE M++ G EPN
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 433 SQCCNILLQACVEACQFDRAFRLF------------RSWT-LSKTQVALGEDYDGNTDRI 479
N L+ Q D A +LF RS+ L K G D +
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR-IDEAKGLL 280
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
+ M HK + P T TY+ LMK C D A L+
Sbjct: 281 AEMSHK------------------------ALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EMR+ GL P+ ++++I++D G+++ A ++LK M+E + P++ YT I+
Sbjct: 317 EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFG 376
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ A LF + IQP++VTY ++ + G +E + +++DM G
Sbjct: 377 KLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE---LFRDMAVHG 427
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 359 LKLDVFTYSTIVKVF--ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
++ DV+T + ++ F ++ + A V +M G+ PN +T+S+L+N ++ +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDG 474
A+ LF+EM++ G EP+ + ++ + A +L + K V + Y
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV---YST 122
Query: 475 NTDRISNMEHKDKQSITNTPNFV---------PN-SHYSSFDKRFS-----------FK- 512
D + KDK IT F+ PN YSS F FK
Sbjct: 123 IIDSLC----KDKL-ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177
Query: 513 -------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T T+NIL+ + ++A + M G+ PN ++ L+D
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A ++ IM G +P V +Y IK +S R+ +A L EM H + P+ VTY T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 624 LLRARSRYGSLHEVQQCL 641
L++ + G + Q+ L
Sbjct: 298 LMKGFCQDGRPQDAQKLL 315
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ ++D G ++++ ++E + + V N+ +N+LM+ + + ++
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + SYNIL+K C +G A+ + E+ H L D TYST++K
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH----KALTPDTVTYSTLMK 300
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A K+ E+M S G+ P+ +T+S +++ G +++A L + M ++ EP
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
N IL+Q + + A LF + + Q
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
+++ + ++ + +T + +++LM D + ++ + M+ G++ D+ +Y+I+L
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G+ A E+ ++ E+K ++ ++F Y+ +++ + + A ++ ++
Sbjct: 335 DGLCKQGHLDEAFELLKAMQ--ESK--IEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +T++ +I+ GL +A LF +M GC PNS N+++Q +
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450
Query: 452 AFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
A RL R ++ + + D + + IS H Q
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQMLSDLESRDEIISLFMHGSSQG 493
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 184/403 (45%), Gaps = 36/403 (8%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFT 308
L PN++ +ID G+ +++RA++ +++ + ++ +NSL++ DL+
Sbjct: 195 LPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ M+K G AD+ +YN L+ G A +GE+K +GV+ +V T+ST
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKR---QGVVA-NVVTFST 310
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
V F Q A+K+ M G+ PN T++SL++ AG ++ A+ L +EM+ G
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370
Query: 429 CEPNSQCCNILLQA-CVEA--CQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRIS 480
PN +++ C E + D L ++ L T + G + N++R
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNE 538
++ ++ K + + Y L+ C D K+L+++
Sbjct: 431 DLLNQMKNK--------------------GMELDVSLYGTLIWGLCKDQKVDEAKSLLHK 470
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL PN + +T ++DA +G A+ +L + + G P+VV Y I ++
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +A S F +M+ + PN+ Y L+ + GSL++ +
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 223/518 (43%), Gaps = 42/518 (8%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L D G ++ V + + + R+P +++L N+ L R ++P ++
Sbjct: 144 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG-GLVRRLFDLLPVPNVFT 202
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N V +F K+ +LV A + K SP++ ++ID G CGD + + ++R
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ +N+L+N + ++ + M++ GV+A++ +++ + A C G
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG--- 319
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L QE + +G++ + FTY+++V A A+ + ++M+ G+ PN +T+
Sbjct: 320 LVQEAMKLFAQMRVRGMMP-NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +++ G V +A ++ M + G + N L+ +RA L
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Query: 462 SKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---- 509
++ + G D D ++ HK PN V + + D F
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK-MAGCGLRPNTV--IYTTIMDALFKAGK 495
Query: 510 --------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
F+P TY L+ C +A+ N+MR +GL PN ++T
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G++ A+ ++ M + GMS D V YT+ I ++ L+ AF+L +M
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+Q +L Y + S + +++ +Q+ V +M G
Sbjct: 616 LQLDLYCYTCFI---SGFCNMNMMQEARGVLSEMIGTG 650
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN I TI+D G ++ A+ + N+ + +L++ A + +
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGN--------------------TVLAQEIYGEVK 351
+ M++LG+ ++ +Y L+ C G+ V I G +K
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597
Query: 352 H--------LEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L+ K + L+LD++ Y+ + F + Q A V +M+ G+TP+
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657
Query: 401 WSSLINACANAGLVEQAMHLFEEM 424
++ LI G +E+A L EM
Sbjct: 658 YNCLIRKYQKLGNMEEASSLQNEM 681
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 183/428 (42%), Gaps = 60/428 (14%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
R RD A R + ++ SPN+Y II GD K + + ++
Sbjct: 180 RSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGIS 239
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ +N+L++ + +K + + + M GV A++ SYN ++ C G E+
Sbjct: 240 PNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGEL 299
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V+ + KG++ D TY+T+V F L + +M+ G++PN +T+++LIN
Sbjct: 300 ---VEEMRGKGLVP-DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLIN 355
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG + +A+ +F++M G PN + L+ + + A+++ +S
Sbjct: 356 CMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS---- 411
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
F P+ TYN L+ C
Sbjct: 412 -------------------------------------------GFSPSVVTYNALVHGYC 428
Query: 527 TDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
RV+ + +R + GL P+ +S++ +I + A Q+ + M E G+ PD
Sbjct: 429 F-LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y++ I+ ++L +AF LF EM + P+ VTY +L+ A G E+ + L +
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG---ELSKALRL 544
Query: 644 YQDMWKAG 651
+ +M + G
Sbjct: 545 HDEMVQRG 552
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 251/609 (41%), Gaps = 90/609 (14%)
Query: 50 PTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFAS 109
PTV S L + +RR S+ DY D A ++ +D M+ V +
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDY--DDAERVFRD-------MVRNGVS---------PN 206
Query: 110 MLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKLLKNECQR 164
+ + ++ G+V +G ++ +G ++K+ + G++P L D S K E
Sbjct: 207 VYTYNVIIRGVVS---QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMA 263
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL + V G+ L + + L + R+ ++ ++ +R +VP ++ +
Sbjct: 264 LLRAMAVG---GVAANLISYNSVINGLCGKGRMSEVG----ELVEEMRGKGLVPD-EVTY 315
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
V F K+ +L L SPN+ T+I+ G+ ++ I++ +R
Sbjct: 316 NTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRV 375
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTV 341
+ + N + +L++ E YK + ++ G + +YN L+ C G
Sbjct: 376 RGLRPNERTYTTLIDGFCQK-GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV- 433
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
QE G ++ + +G L DV +YST++ F + A ++KE+M+ GV P+T+T+
Sbjct: 434 --QEAVGILRGMVERG-LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490
Query: 402 SSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSW 459
SSLI C LVE A LF EM++ G P+ L+ A CV+ + +A RL
Sbjct: 491 SSLIQGLCLQQKLVE-AFDLFREMMRRGLPPDEVTYTSLINAYCVDG-ELSKALRLHDEM 548
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------- 512
Q D + I+ + K + + KR K
Sbjct: 549 ----VQRGFLPDNVTYSVLINGLNKKARTKVA---------------KRLLLKLFYEESV 589
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
P TYN L++ C NE ++V L+ G + A ++ K
Sbjct: 590 PDDVTYNTLIENCSN---------NEFKSV---------EGLVKGFCMKGLMNEADRVFK 631
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + P+ Y I R + +A++L+ E++H + V I L++A +R G
Sbjct: 632 TMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691
Query: 633 SLHEVQQCL 641
E+ + L
Sbjct: 692 MNDELSRLL 700
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 17/303 (5%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+H A VL + + + + ++ + + A +V DM+ GV+PN T++ +I +
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + +M + G PN N L+ A + + A L R+ + L
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANL-I 278
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
Y+ + + K ++ V + P TYN L+ C +
Sbjct: 279 SYNSVINGLCG-----KGRMSEVGELVEEM------RGKGLVPDEVTYNTLVNGFCKEGN 327
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
++ L++EM GLSPN +++T LI+ +GN+ A++I MR G+ P+ YTT
Sbjct: 328 LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTT 387
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + +A+ + EM P++VTY L+ Y L VQ+ + + + M
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHG---YCFLGRVQEAVGILRGMV 444
Query: 649 KAG 651
+ G
Sbjct: 445 ERG 447
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 175/382 (45%), Gaps = 32/382 (8%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA-DMASYNILLK--ACCL 336
+R +++ NIY +++L+ L ++ M ++ +A + +YN ++K + C
Sbjct: 338 MREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCK 397
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ ++ + KG + DV TY+T++ F+ + ALK+ ++M A V P
Sbjct: 398 RNDCGGITRAMSLLREMATKGCIP-DVVTYATLIDAFSKRMEPERALKLFQEMKEANVKP 456
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +SSLI+A AG VE+A+ +FEEM P+ N L+ + Q D+AF ++
Sbjct: 457 NNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIY 516
Query: 457 RSWTLSKTQVALGEDYDGNTDRIS-----NMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ K Q+ DRI+ + K K SI + +
Sbjct: 517 DR--MRKLQI--------QPDRITFNALISASGKAKNSIRAL------EAMGDMTEIYGL 560
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ AC D+ + + EMRT G+ P +++ LI S ++ + +
Sbjct: 561 TPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFK 620
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I+ +M ++G++PD T I C R + L AF + E+ K + P+ VT+ T + A
Sbjct: 621 IVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA-- 678
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G L ++ + +M G
Sbjct: 679 -VGKLDSSEKMFELLSEMESRG 699
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 174/427 (40%), Gaps = 54/427 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K+ + AL+ + K+ PN Y ++I G ++ AI+E+
Sbjct: 424 VTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEE 483
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +++ FN+L++ + E+Y M+KL + D ++N L+ A A N
Sbjct: 484 MTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKN 543
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A E G++ + L D +Y+ ++ + + A +V E+M + G+ P T+
Sbjct: 544 SIRALEAMGDMTEIYG---LTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTV 600
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + + + + + + MLQ G P++ N L+ AC AF + +
Sbjct: 601 TFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKF 660
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K+ P T+N
Sbjct: 661 -----------------------------------------------KQLGVHPDNVTFN 673
Query: 520 ILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ A ++ L++EM + G+SP+ ++ ++ CG G ++ + + E
Sbjct: 674 TFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEK 733
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD V ++ I+ V L +A + K Q++ N + LL + R +
Sbjct: 734 RLEPDSVTFSLLIENYVSHHLLDKAVIAYHNCKRQQLELNSNVVMHLLESLIRKDEIEVA 793
Query: 638 QQCLAVY 644
+ L Y
Sbjct: 794 KLILKDY 800
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 172/397 (43%), Gaps = 52/397 (13%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMAS 326
CG ++ ++ ++ ++ ++ + +L++ + ++ L++++ M++ V +
Sbjct: 401 CGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYC 460
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y+ L+ A C AG A I+ E+ H + DVF ++ ++ F + A ++
Sbjct: 461 YSSLISAFCRAGYVERALAIFEEMTHER----IVPDVFAFNALIDGFGKLRQVDKAFEIY 516
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVE 445
+ M + P+ IT+++LI+A A +A+ +M + G P+ N L+ AC +
Sbjct: 517 DRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGK 576
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ F +A+ +F M K + T T N + S
Sbjct: 577 SGDFTKAYEVF-----------------------EEMRTKGIRPCTVTFNALIYGASRSH 613
Query: 506 DKRFSFK-----------PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
D SFK P T N L+ AC D ++ + + +G+ P+++++
Sbjct: 614 DLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFN 673
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR---LKQAFSLFEEM 609
IDA G + E ++L M G+SP V T + C R + +++ F +F E
Sbjct: 674 TFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEK 733
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ ++P+ VT+ L+ Y S H + + + Y +
Sbjct: 734 R---LEPDSVTFSLLI---ENYVSHHLLDKAVIAYHN 764
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 135/361 (37%), Gaps = 77/361 (21%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL----- 413
+K DV ++S + + + A + M + PN T+S+LI GL
Sbjct: 308 VKRDVASWSIYITALGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRAL 367
Query: 414 ------------------------------------VEQAMHLFEEMLQAGCEPNSQCCN 437
+ +AM L EM GC P+
Sbjct: 368 SQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYA 427
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY-----------DGNTDR-ISNMEHK 485
L+ A + + +RA +LF+ + + +Y G +R ++ E
Sbjct: 428 TLIDAFSKRMEPERALKLFQEMKEANVK---PNNYCYSSLISAFCRAGYVERALAIFEEM 484
Query: 486 DKQSITNTPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDY 529
+ I P+ F N+ F K + +P T+N L+ A
Sbjct: 485 THERI--VPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAK 542
Query: 530 YRVKAL--MNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
++AL M +M + GL+P+ S+ LIDACG SG+ A ++ + MR G+ P V +
Sbjct: 543 NSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTF 602
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I RS L +F + + M + P+ T TL+ A +R L + L ++
Sbjct: 603 NALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQ 662
Query: 647 M 647
+
Sbjct: 663 L 663
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 210/469 (44%), Gaps = 63/469 (13%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 17 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136
Query: 339 N-----TVLAQ---------------------EIYGEVK------HLEAKGVLKLDVFTY 366
N +LAQ EI E K L+A G L TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG-LSPTAATY 195
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
IVK+F A AL + E+M GV+PN + ++ +++ A G A ++E+M+
Sbjct: 196 GCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 255
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG +P+ NIL+ A +A + D+A + + ++ + E Y D +
Sbjct: 256 AGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI-ETYTSILDGYVKGGNIQ 314
Query: 487 KQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTV 542
K FD K +P +YN L+ A + ++NEM
Sbjct: 315 KA-------------LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLAN 361
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN S+T L + +G+VE A + + M+++ ++ D+VAY +K C +S +++A
Sbjct: 362 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 421
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+F+++ ++ N +TY T+L +R G L + + L DM K G
Sbjct: 422 AEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL---NDMQKHG 467
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 171/409 (41%), Gaps = 55/409 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L+ + F + RD L + K SP I+ + G+ K+ I E++
Sbjct: 159 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 218
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V+ N ++ +M+ A FT +V+++M G+ D+ YNIL+ A C AG
Sbjct: 219 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 278
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ G ++++EA +L + TY++I+ + Q AL+V + + +AG+ P ++
Sbjct: 279 ---DKALGVLENIEANRLLP-TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS 334
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++ A A +E A + EML G PN + L + A ++AF +F+
Sbjct: 335 YNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQR-- 392
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +A+ Y
Sbjct: 393 MKKENLAI---------------------------------------------DIVAYGA 407
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KACC R + ++ GL N I++ ++D G + A +L M++ G
Sbjct: 408 LLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHG 467
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D + YT+ IK C RS ++ M+ +++ N TY TL+
Sbjct: 468 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 516
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 171/407 (42%), Gaps = 57/407 (14%)
Query: 214 AC-IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
AC + P A C V+ F K ++ AL + KH SPN I I+D GD+
Sbjct: 185 ACGLSPTAATYGC-IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDF 243
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++ED+ S + +I ++N L++ A + L V +N++ ++ + +Y +
Sbjct: 244 TAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSI 303
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L GN A E++ +K L+ V +Y++++ A A+ + A + +ML
Sbjct: 304 LDGYVKGGNIQKALEVFDRIK----TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 359
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ GV PN ++++L A AG VE+A +F+ M + + LL+AC ++
Sbjct: 360 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQ 419
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
RA +F Q IT+
Sbjct: 420 RAAEVF-------------------------------QQITDA----------------G 432
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
K TY ++ + + + L+N+M+ G + I +T I AC SG+ E
Sbjct: 433 LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 492
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ L +MRE + + YTT I + + QA S +E+ K +Q
Sbjct: 493 ETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQ 539
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K ++ AL +D K P + +++ +R + ++ + V N
Sbjct: 309 KGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNER 368
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L A D++ +++ M+K + D+ +Y LLKACC +G A E++ ++
Sbjct: 369 SYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQI 428
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LK + TY T++ +A A + DM G +TI ++S I AC
Sbjct: 429 ----TDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFR 484
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+G E+ M + E N++ L+ + A D+A + S Q+
Sbjct: 485 SGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQL 540
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP Y +L+ A D +A MR + PN +T LI A + ++EGA+
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+ + + + I + + A FE+ K + P + Y ++++A
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133
Query: 630 RYGSLHEVQQCLAVYQD 646
+ G++ V+ LA ++
Sbjct: 134 QAGNMETVEALLAQMEE 150
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 169/393 (43%), Gaps = 20/393 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV-FNSLMNVNAHDL-KFTLEV 311
PN+ T I CG G + + E++ + V N ++ D + + V
Sbjct: 317 PNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSV 376
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++M + GV A+ Y + +KAC A E+ ++ +E GV + V Y +
Sbjct: 377 LRSMSEAGVAAEAKCYAVTIKACGRGRRWARALEL---LREMEKNGVEPI-VMGYDACIA 432
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCE 430
D K W+ A+ + +M + GVTP +++S I AC + + A+ L EM Q AG
Sbjct: 433 ACGDGKQWEQAVALLREMPTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGIN 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ C N + A Q++ A L R ++G + ++ D
Sbjct: 493 PDAVCYNNCMTALGRGLQWEMALTLLRE------MPSVGLPIKAQSYTVAIKACGDAGE- 545
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
P + S P +Y + AC + + L+ EM ++G+SPN
Sbjct: 546 -GKPAV---ALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPND 601
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++T I ACG SG E AL +L+ M G P++ +YT IK C + ++A LF E
Sbjct: 602 RTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACGNGGQWERAVELFRE 661
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ Y ++A G++ + + L
Sbjct: 662 LPSAGITADVQAYNACVQACGNSGAVDQAVELL 694
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 192/446 (43%), Gaps = 39/446 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY---ICRTIIDVCGICGDYMKSRAIYE 280
F +++ G +RD A R ++ L P + +C +++ G + +
Sbjct: 182 FMRRLQQAGMRRDCDEAERVL---RQALECPGVVDTVMCNAVLNTFAADGRWQVVLEVMR 238
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+R +T + + + + + + ++ + K M GV + Y + AC ++G
Sbjct: 239 QMREAGLTPDALTYTNAIKACGKGREWRRSVALLKEMSAHGVELNSIHYVCAMTACKISG 298
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ E G ++ ++A G+ + +V Y+T + ++A+ + E+M + GV PNT
Sbjct: 299 ---MGAEAVGLLREMQAAGI-EPNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNT 354
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T + + A + EQA+ + M +AG ++C + ++AC ++ RA L R
Sbjct: 355 QTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWARALELLRE 414
Query: 459 WTLSKTQ-VALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFS 510
+ + + +G D DG + ++ ++ TP V SH ++ + +
Sbjct: 415 MEKNGVEPIVMGYDACIAACGDGKQWEQAVALLREMPTVGVTPTVVSYSHAIAACGQSYQ 474
Query: 511 FKPT----------------TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+KP YN M A + L+ EM +VGL S+T
Sbjct: 475 WKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYT 534
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ I ACG +G + A+ +L+ M+ E + P+V++YT AI C + + KQA L EM
Sbjct: 535 VAIKACGDAGEGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMAS 594
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEV 637
+ PN TY + A G E
Sbjct: 595 MGVSPNDRTYTAAITACGNSGKWEEA 620
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 142/325 (43%), Gaps = 27/325 (8%)
Query: 254 PNMYICRTIID---VCGICGDYMKSRAIYEDLRS--QNVTLN--IYVFNSLMNVNAHDLK 306
P + + T++ CG + + E LR Q +N +N+ M L+
Sbjct: 451 PTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQ 510
Query: 307 F--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ L + + M +G+ SY + +KAC AG A + ++ ++A+ + +V
Sbjct: 511 WEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVAL---LREMQAELSVPPNVI 567
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ + W+ AL++ +M S GV+PN T+++ I AC N+G E+A+ L EM
Sbjct: 568 SYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLREM 627
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
G +PN ++AC Q++RA LFR S A + Y+ N
Sbjct: 628 PTMGADPNIASYTATIKACGNGGQWERAVELFRE-LPSAGITADVQAYNACVQACGNSGA 686
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTD---YYRVKALMNEMR 540
D Q++ P + +P TYN + AC C D + + L+ EM
Sbjct: 687 VD-QAVELLREMAPAA---------GLEPNVFTYNAALMACSCPDGGRWGKALELLEEMA 736
Query: 541 TVGLSPNHISWTILIDACGGSGNVE 565
G++PN ++ + ACG G E
Sbjct: 737 WRGIAPNAVTHESALAACGERGRDE 761
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 119/299 (39%), Gaps = 54/299 (18%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ LE GV+ D + ++ FA WQ+ L+V M AG+TP+ +T+++ I AC
Sbjct: 204 QALECPGVV--DTVMCNAVLNTFAADGRWQVVLEVMRQMREAGLTPDALTYTNAIKACGK 261
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+++ L +EM G E NS + AC + A L R + Q A
Sbjct: 262 GREWRRSVALLKEMSAHGVELNSIHYVCAMTACKISGMGAEAVGLLR-----EMQAA--- 313
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+P YN + AC T
Sbjct: 314 ---------------------------------------GIEPNVICYNTAIAACGTGGQ 334
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A L+ EM +G+ PN + + A G E A+ +L+ M E G++ + Y
Sbjct: 335 SEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAV 394
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IK C R +R +A L EM+ ++P ++ Y + A G + +Q +A+ ++M
Sbjct: 395 TIKACGRGRRWARALELLREMEKNGVEPIVMGYDACIAA---CGDGKQWEQAVALLREM 450
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TY +KAC ++ R AL+ EM G+ N I + + AC SG
Sbjct: 241 REAGLTPDALTYTNAIKACGKGREWRRSVALLKEMSAHGVELNSIHYVCAMTACKISGMG 300
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A+ +L+ M+ G+ P+V+ Y TAI C + + A L EEM ++PN T +
Sbjct: 301 AEAVGLLREMQAAGIEPNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAA 360
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+RA G +Q ++V + M +AG
Sbjct: 361 VRA---AGDRDRGEQAVSVLRSMSEAG 384
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 32/330 (9%)
Query: 330 LLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++K C T +A+ ++ + K L K LK+ Y+ ++ F + ++A + E+
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV----YNLLIDGFLEVHNVEVAWNLFEE 815
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M SAG P+T T++SLI+A +G + + L++EML GC+PN+ N+++ V++ +
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 449 FDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYS 503
D+A L+ S S T G DG + R+ + F HY
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEM----------FDGMVHYG 925
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
+P + YNIL+ + A M G+ P+ S+TIL+D +
Sbjct: 926 C-------RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V+ AL + +++ G+ PD+VAY I RS+R ++A SLF EM++ I P+L TY
Sbjct: 979 GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ G + E + +Y+++ G
Sbjct: 1039 NSLILNLGIVGMIEEAGK---IYEELQFIG 1065
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 174/392 (44%), Gaps = 49/392 (12%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKA 333
+ E++ S + NIY + + V D K E Y+ M+++ G D+ +Y +L+ A
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKID-EAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A A ++ ++K K D TY T++ F+D K+ +M + G
Sbjct: 309 LCTARKLDDAMCLFTKMKSSSHKP----DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ +T++ L+NA AG + +A L + M + G PN N L+ + A + D A
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424
Query: 454 RLF---RSWTLSKTQVA--LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + T L DY G + P +F+K
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGH-------------------PGKALETFEK- 464
Query: 509 FSFKPTTTTYNILMKACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACG 559
K NI+ AC Y + KA+ NE+++ GL+P+ +++ +++
Sbjct: 465 --MKARGIAPNIV--ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G V+ A+++L M + PDV+ + I ++ R+++A+ +F M+ + P +V
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVV 580
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY LL + G ++Q+ + +++ M G
Sbjct: 581 TYNILLAGLGKEG---QIQKAVQLFESMNGHG 609
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 24/327 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQ+ + ++ +Y I+ K+ + G L Q K EA VL + ++Y+ ++
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGG--LRQAPSALEKMREAGFVL--NAYSYNGLI 201
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + AL+V M+S G+ P+ T+S+L+ A ++ M L EEM G
Sbjct: 202 HFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLR 261
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDK 487
PN I ++ + D A+R+ + G D Y D + D
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRM----DDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLS 545
T K S KP TY L+ + C +V+ + EM G +
Sbjct: 318 AMCLFTKM-----------KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++TIL++A +G + A +L MR+ G+ P++ Y T I +R+ RL A L
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
F M+ ++P TYI L+ + G
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSG 453
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 180/420 (42%), Gaps = 28/420 (6%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
R L A+ + K P+ T++D CG K I+ ++ + ++ F
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
L+N A + ++ M+K GV+ ++ +YN L+ A A +++ +
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF---SN 429
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ GV + +TY ++ + AL+ E M + G+ PN + ++ + + A G
Sbjct: 430 MESLGV-EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A +F E+ +G P+S N++++ + Q D A +L +SK Q D
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE--MSKVQCE--PDV 544
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
I + + + F + + PT TYNIL+ +
Sbjct: 545 IVINSLIDTLYKAGRVE----------EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KA L M G SPN I++ L+D + V+ AL++ M PDV+ + T
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ ++K A LF +MK ++P+ VT TLL + G +++ + +D +
Sbjct: 655 IIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSG---QIEDAFRITEDFF 710
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L++ + H+++ +++ M+ G D +YN L+ A G + E++
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA---HGKSGKINELFDLY 848
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +G K + TY+ ++ + A+ + +++S +P T+ LI+
Sbjct: 849 DEMLTRGC-KPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+G ++ A +F+ M+ GC PNS NIL+ + D A F+
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV---------- 957
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
K+ I +P +Y IL+ C
Sbjct: 958 ----------------KEGI---------------------RPDLKSYTILVDILCIAGR 980
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL +++ GL P+ +++ ++I+ G S E AL + M+ G+ PD+ Y +
Sbjct: 981 VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I +++A ++EE++ ++PN+ TY L+R + G+ + +Y+ M
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN---SELAYGIYKKMM 1097
Query: 649 KAG 651
G
Sbjct: 1098 VGG 1100
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP+ T++ LM A + V L+ EM ++GL PN ++TI I G G ++ A
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I+K M +DG PDVV YT I +++L A LF +MK +P+ VTY+TLL
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 628 RSRYGSLHEVQQ 639
S G L +V++
Sbjct: 344 FSDCGHLDKVEK 355
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 169/424 (39%), Gaps = 44/424 (10%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK AL ++ K +PN+ C + G +++A++ +L+S + +
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N +M + +++ M K+ D+ N L+ AG A +++
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + L V TY+ ++ Q A+++ E M G +PNTIT+++L++
Sbjct: 570 MEEMN----LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLC 625
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--LSKTQVA 467
V+ A+ +F +M C P+ N ++ ++ Q A LF L V
Sbjct: 626 KNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVT 685
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-------------SFKPT 514
L G I + + +D IT + S+ D+ F + K
Sbjct: 686 LCTLLPG---VIKSGQIEDAFRITEDFFYQVG---SNIDRSFWEDVMGGILTEAGTEKAI 739
Query: 515 TTTYNILMKACCTD----YYRVKALMNEMRT-------------VGLSPNHISWTILIDA 557
++ +A C D +K L +T +G+ P + +LID
Sbjct: 740 LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
NVE A + + M+ G +PD Y + I +S ++ + F L++EM +PN
Sbjct: 800 FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859
Query: 618 LVTY 621
+TY
Sbjct: 860 TITY 863
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY---------MKSRAIYEDLR 283
K L A +D + PN I +++ G G M I DL+
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
S + ++I A + L ++ +++ G+ D+ +YN+++ + T A
Sbjct: 967 SYTILVDILCI-------AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEA 1019
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ E+++ +G++ D++TY++++ + A K+ E++ G+ PN T+++
Sbjct: 1020 LSLFHEMQN---RGIVP-DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNS 433
LI +G E A ++++M+ GC+PN+
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNT 1105
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/351 (18%), Positives = 134/351 (38%), Gaps = 55/351 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A ++ K +P+ + ++ID G G + +Y+++ ++ N +N +++
Sbjct: 809 AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V ++ L +++Y N+ ++ L+ +G A E++ + H +
Sbjct: 869 NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ Y+ +V + A + + M+ G+ P+ +++ L++ AG V+ A
Sbjct: 929 ----NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+H FE++ QAG +P+ N+++ + + + A LF
Sbjct: 985 LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE------------------- 1025
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYRVKAL 535
M+++ P TYN IL +
Sbjct: 1026 ----MQNR------------------------GIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
E++ +GL PN ++ LI SGN E A I K M G P+ +
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ Y C P + I + V +GK + +A + K P++ ++D+ I G
Sbjct: 922 VHYGC-RPNSAI-YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYN 328
+ +E L+ + ++ +N ++N + + L ++ MQ G++ D+ +YN
Sbjct: 980 RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ + G A +IY E++ + LK +VFTY+ +++ + + ++A + +
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIG----LKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095
Query: 389 MLSAGVTPNTITWSSLIN 406
M+ G PNT T++ L N
Sbjct: 1096 MMVGGCDPNTGTFAQLPN 1113
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +MR G N S+ LI SG + AL++ + M +G+ P + ++ + +
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +K L EEM+ ++PN+ TY +R R G + E + + D
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD 292
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMA 322
G C GD K+ A++ D+ S+ + N + ++++ + +E +K + L +
Sbjct: 348 GYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFL 407
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYNI++ A C A + E+K + + +D+ Y+T++ + A
Sbjct: 408 DEVSYNIVVDALCKLEKVDQAVALLDEMKGKQ----MDMDIMHYTTLINGYCHVGKLVDA 463
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+V E+M G+ P+ +T++ L+ A + GL +A+ L+E M +PN+ N++++
Sbjct: 464 FRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEG 523
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ A F + + ++Y +H +K S +
Sbjct: 524 LCIGGKVTEAEAFF--CNMEDKSI---DNYGAMITGYCEAKHTEKAS----------ELF 568
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+R Y +L K C + R L+ M + + P+ + +I AC +
Sbjct: 569 FELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRA 628
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + I+R+ G++PD+ YTT I VC R RL +A +LF++MKH I+P+LVT+
Sbjct: 629 GDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTF 688
Query: 622 ITLL 625
LL
Sbjct: 689 TVLL 692
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 151/392 (38%), Gaps = 82/392 (20%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN LMN + + L +YK ++ LG+ + +Y+I++KA C G+ V A ++
Sbjct: 198 HIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVF 257
Query: 348 GEVK-------------HLEA------------------KGVLKLDVFTYSTIVKVFADA 376
E++ ++E +G + +DV+ Y +++ F +
Sbjct: 258 QEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNE 317
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A V DM + + +S LI AG + +A+ L +M G + N
Sbjct: 318 MKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIV 377
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ +LQ E + F+ + ++ L E
Sbjct: 378 STILQYFCEKGMHSQVVEEFKRF--KDLRIFLDE-------------------------- 409
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
+YNI++ A C + AL++EM+ + + + +T L
Sbjct: 410 -------------------VSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTL 450
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ G + A ++ + M G+ PDVV + + R +A L+E MK +
Sbjct: 451 INGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDL 510
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+PN +T+ ++ G + E + +D
Sbjct: 511 KPNAITHNVMIEGLCIGGKVTEAEAFFCNMED 542
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 179/438 (40%), Gaps = 61/438 (13%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKF 307
HL +P++ II + G + +I+ L N + + L++ + H +
Sbjct: 89 HLKNPDIPAYAAIIRILCHWGLHKMLHSIFLHLHQNNNDFTSFDISHLLDTLSLPHHIDI 148
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE ++ + Y+ L+K+ AG + E + ++ +G L +FT++
Sbjct: 149 DLEKEDTVKHRSSFL-IQVYDALVKSYVTAG---MLDEAINALFQIKRRGFLP-HIFTFN 203
Query: 368 TIV-KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ K+ A+ K AL + + + S G+ PN T+S +I A G + +A ++F+EM
Sbjct: 204 YLMNKLIANGKV-DAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMEL 262
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN+ ++ + D +++ ++W + + Y N D
Sbjct: 263 CGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYA-YVAVIRGFCNEMKMD 321
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + +K+ Y+ L++ C D + AL N+M + G+
Sbjct: 322 RAEVV----------LGDMEKQ-ELISDARCYSELIRGYCKAGDLSKALALHNDMESKGI 370
Query: 545 SPN-----------------------------------HISWTILIDACGGSGNVEGALQ 569
N +S+ I++DA V+ A+
Sbjct: 371 KTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVA 430
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M+ M D++ YTT I +L AF +FEEM+ ++P++VT+ LL A S
Sbjct: 431 LLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFS 490
Query: 630 RYGSLHEVQQCLAVYQDM 647
R G +E L +Y+ M
Sbjct: 491 RRGLANEA---LKLYEYM 505
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
S +MY +I C GD + A+++ LR +T +I+ + +++NV + L
Sbjct: 614 SKDMY--GKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARN 671
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M+ G+ D+ ++ +LL G +K + + + F
Sbjct: 672 LFQDMKHRGIKPDLVTFTVLLD---------------GHLKRVHS------EAFARKRKE 710
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + W+ +M + + P+ I +++LI+ +E A+ L++EM+ G E
Sbjct: 711 VNLAASNIWK-------EMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVE 763
Query: 431 PNSQCCNILLQAC 443
P+ C LL C
Sbjct: 764 PDRATCTALLSGC 776
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K P TY+I++KA C V+A + EM G+ PN ++T I+ +
Sbjct: 226 KSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRS 285
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ Q+L+ +E + DV AY I+ ++ +A + +M+ ++ + Y L
Sbjct: 286 DFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSEL 345
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R + G L + LA++ DM G
Sbjct: 346 IRGYCKAGDL---SKALALHNDMESKG 369
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 137/348 (39%), Gaps = 44/348 (12%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G C G + + ++E++ + + ++ FN L+ + L++Y+ M+ +
Sbjct: 451 INGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDL 510
Query: 321 MADMASYNILLKACCLAGNTVLAQEI------------------YGEVKHLEA------- 355
+ ++N++++ C+ G A+ Y E KH E
Sbjct: 511 KPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNYGAMITGYCEAKHTEKASELFFE 570
Query: 356 ---KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+G+L + Y + K+ + + AL + + ML + P+ + +I AC AG
Sbjct: 571 LSERGLLMDRGYIYKLLEKLCEEGEK-DRALWLLKTMLDLNMEPSKDMYGKVITACYRAG 629
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALG 469
+ A +F+ + ++G P+ ++ C + A LF+ + V
Sbjct: 630 DMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFT 689
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
DG+ R+ + K+ N + S+ + +P Y L+ C
Sbjct: 690 VLLDGHLKRVHSEAFARKRKEVN----LAASNIWKEMQNTEIRPDVICYTALIDGHCK-V 744
Query: 530 YRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
R++ L +EM G+ P+ + T L+ C G+V+ L L ++
Sbjct: 745 DRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLNLI 792
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+++ G P+ ++ L++ +G V+ AL I K ++ G++P+ Y+ IK R
Sbjct: 189 QIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKG 248
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA-----RSRYGSLHEVQQCLAVYQDMWKAG 651
L +A ++F+EM+ + PN Y T + RS +G ++V Q WK G
Sbjct: 249 SLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFG--YQVLQA-------WKEG 298
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 223 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 282
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 283 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 343 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 455
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 456 --------------------------DEMRESNCPL------------------GTTTYN 471
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 592 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 637
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L + LA VK + A G L+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 572
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 632
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 633 MITSGCAPDRKARAMLRSA 651
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 204/476 (42%), Gaps = 60/476 (12%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+I + + F + A++ + KKH P + T++D G G ++ ++
Sbjct: 527 GEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ Q ++ ++SLM + +L ++ M + G +AD+++Y++++ C +
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646
Query: 338 GNTVLAQEIYGEVKHLEAKGVLK-------------------------------LDVFTY 366
+ A +++G +K + +L D F Y
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ +V + A K+ + M + + P+ T++SL++ +G +E+A ++F +M +
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYDGNTDRIS 480
G EP+ L+ + + A +FR+ + T +L D G R+
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL-IDSLGKEGRVE 825
Query: 481 NMEHKDKQSITN--TPNF-VPNSHYSSFDK---------------RFSFKPTTTTYNILM 522
+ + SI+ TPN V +S SF K R P TYN L+
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885
Query: 523 K--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + L+ EM VG P+ +++ ILID G G V+ A K M+E G+
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDV+ +T+ I+ + +L +A LF+ M+ P++VTY L+ R G +HE
Sbjct: 946 PDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 190/446 (42%), Gaps = 43/446 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + GK + A + K PN+ +I V G G ++ ++ D
Sbjct: 393 IAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHD 452
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ Q +++ +N+L++V + L + K M + G C ++ +
Sbjct: 453 LKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG------------GECIISRD 500
Query: 340 TVLAQE--IYGEVKHLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ E I G + +E + G L TY+T++ F A+K+ E M
Sbjct: 501 SNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+++L++ AG +++A+ L EM + GCEP+ + L+ + + Q + + L
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
F +++L + +D D D M+ + + + + +S
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
F+ + P T YNI++ +A L++ M+ + P+ +
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T L+D G SG +E A + M E+G PDVVAYT+ + V + +L A +F M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+ P++VTY +L+ + + G + E
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEE 826
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 60/371 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + +++QN+ +++ + SL++ + L+ ++ M + G D+ +Y L+
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A I+ + AK DV TYS+++ + A E+ +S G T
Sbjct: 785 KGGKLSHALIIFRAM----AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCT 840
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +SSLI++ G+V++A+ LFEEM + C PN N LL +A + + A +L
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ + + P+ V
Sbjct: 901 L----------------------------EEMEKVGCVPDLV------------------ 914
Query: 516 TTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYNIL+ K D ++ M+ G+ P+ I++T LI++ G + A ++
Sbjct: 915 -TYNILIDGVGKMGMVD--EAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS-R 630
M E+G +P VV Y I + R+ ++ +A +F EMK P+ +T + R S R
Sbjct: 972 DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVR 1031
Query: 631 YGSLHEVQQCL 641
H +++ L
Sbjct: 1032 EQQFHALEEGL 1042
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 17/291 (5%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+ ++K A A+ +++ M G + +SL+ + V A+ +F
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M GC P++ N +L+ V+ + A +F + Q D T RI
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQP------DAQTFRI--F 293
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
H +S P P + P T+ +L+ A +A N M+
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMI----KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ SPN +++T L++ +G +E A ++ M+E+ SPD +AY T I ++
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A LF+EMK + PNL TY ++ + G E Q ++ D+ + G
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ---LFHDLKEQG 457
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + GK+ + A ++ S +PN+ + ++ID G G ++ ++E+
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + NI +N+L++ A L ++ + M+K+G + D+ +YNIL+ G
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG---VGK 925
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ E K ++ KG++ DV T++++++ A ++ + M G P+ +
Sbjct: 926 MGMVDEAESYFKRMKEKGIVP-DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVV 984
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
T++ LI+ AG V +A +F EM GC P+ I+
Sbjct: 985 TYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 151/340 (44%), Gaps = 25/340 (7%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--KGVLKLDVFTYSTIVKVF 373
Q+ G + +Y +++K LAG AQE V+ L A K ++ + +++++ F
Sbjct: 174 QQDGYSHTVGTYTLMIKR--LAG----AQETDAVVQILTAMWKEGHRISMHLLTSLLRTF 227
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL++ M S G P+T ++ ++ G A+ +F ++ Q +P++
Sbjct: 228 GSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDA 287
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
Q I + + F+R+ RL + + + G D +T + ++ +
Sbjct: 288 QTFRIFVHS------FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVL------IDALVKS 335
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
N + + K P TY L+ +A + EM+ SP+ I++
Sbjct: 336 GNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAY 395
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
LID G +G + A + K M++ G+ P++ Y I V ++ R +A+ LF ++K
Sbjct: 396 NTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKE 455
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++ TY TL+ + G + +V LA+ ++M + G
Sbjct: 456 QGAVPDVFTYNTLIDVLGKGGQMDKV---LAIIKEMVEKG 492
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 170/432 (39%), Gaps = 89/432 (20%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQ--NVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+M++ +++ G + + I+ ++S N + N+Y F + V + V+
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + + D ++ I + + +G A E E+ K + V T++ ++
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEM----IKSGIDPGVHTFTVLIDA 331
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A K M + +PN +T+++L+N A AG +E+A +F EM + C P+
Sbjct: 332 LVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPD 391
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ N L+ +A + D A LF+ E KD+
Sbjct: 392 AIAYNTLIDGLGKAGEADMACGLFK-------------------------EMKDR----- 421
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
VPN TYNI++ + +A L ++++ G P+ +
Sbjct: 422 --GLVPN---------------LRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFT 464
Query: 551 WTILIDACGGSGNVEGALQILKIMREDG----MSPDV----------------------- 583
+ LID G G ++ L I+K M E G +S D
Sbjct: 465 YNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFK 524
Query: 584 ----VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ Y T + + + + +A L E MK ++ P +VTY TL+ + G L E
Sbjct: 525 SLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDE--- 581
Query: 640 CLAVYQDMWKAG 651
+++ ++M K G
Sbjct: 582 AVSLLREMEKQG 593
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + GK L AL + A K P++ ++ID G G ++ +E+
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
S+ T N+ V++SL++ + LE+++ MQ+ ++ +YN LL AG
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A+++ ++ +E G + D+ TY+ ++ A + M G+ P+ I
Sbjct: 894 LNVAEKL---LEEMEKVGCVP-DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI 949
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI + + +A LF+ M + G P+ N+L+ A + A +F
Sbjct: 950 TFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 192/436 (44%), Gaps = 66/436 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRAIYE 280
F + + GK D+V R D K L+S P++ T+I++ G +++ I
Sbjct: 170 FTTLLIQLGK-FDMVDLAR--DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 281 DLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + N + + SL+ + H+L ++ M K G + +Y+ L+ C G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ E+ KG+ + V+TY+ + DA A+++ M G PN
Sbjct: 287 RLEEAMDMLEEMVQ---KGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFR 457
T+++LI+ + G E A+ L+ +ML G P + N L+ Q CVE +F+ AF +F+
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG-RFETAFTIFK 401
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
W LS + P+T T
Sbjct: 402 -WMLSHGSL----------------------------------------------PSTQT 414
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++K C D + + ++M G SPN I++ LI GN+ A+++L+IM+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+G+ PD YT I R +L+ A SLF M + I PN VTY ++ Y +L
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG---YFNLA 531
Query: 636 EVQQCLAVYQDMWKAG 651
+V LA++ M ++G
Sbjct: 532 KVDDALALFWKMVESG 547
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 172/436 (39%), Gaps = 50/436 (11%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK PN+ +I G + + +Y + + + +N+L+N + +F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++K M G + +YN ++K CL G+ A I+ ++ K +V T
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM----LKAGSSPNVIT 449
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + A+++ E M G+ P+ T++ LI+ + G +E A LF M+
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN ++ + D A LF W + V G T +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALF--WKM----VESGNLPSSQTYNVMISGFS 563
Query: 486 DKQSITNTPNF---------VPNS-HYSSF--------------------DKRFSFKPTT 515
SI+ NF +PN Y+SF +KR F P
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF-PNL 622
Query: 516 TTYNILMKACCTDYYRVKA----LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ C + A L+ + G PN ++T L+ G G A Q++
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M++ G+ P Y + ++ +++ A ++F M Q +L Y L+ A +
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 632 GSLHEVQQCLAVYQDM 647
+ E Q ++Q M
Sbjct: 743 NFIEEAQ---CIFQTM 755
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 40/440 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I II + G G KS I+E++
Sbjct: 109 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEM 168
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG-N 339
+ V +++ + +L+N ++ +LE+ + M+K V + +YN ++ +C G N
Sbjct: 169 PTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLN 228
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ E++H +G+ + D+ TY+T++ A+ A V M G+ P+
Sbjct: 229 WEGLLSLFAEMRH---EGI-QPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDIT 284
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ +L+ +E+ L +EM +G P+ N+LL+A A +FR
Sbjct: 285 TYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQM 344
Query: 460 TLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++ T L Y G+ E + ++NT +P
Sbjct: 345 QEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNT------------------EP 386
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN+L++ Y V L ++M + PN ++ LI ACG G E A +IL
Sbjct: 387 DVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKIL 446
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+ P AYT I+ ++ ++A +F M +P + TY +L+ +R
Sbjct: 447 LHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFAR- 505
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G L++ + + MWK G
Sbjct: 506 GGLYKESEAI-----MWKMG 520
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 197/453 (43%), Gaps = 37/453 (8%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
VPR+ + + +G+ +L + KK +P++ T+I+ C G ++
Sbjct: 173 VPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGL 232
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
+++ ++R + + +I +N+L+N A+ L E V++ M + G++ D+ +Y L++
Sbjct: 233 LSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVET 292
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G +++ +K +E+ G L D+ +Y+ +++ +A + A+ V M A
Sbjct: 293 F---GKLNKLEKVSELLKEMESSGNLP-DISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T+S L+N G + LF EM + EP+ N+L++ E F
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVV 408
Query: 454 RLFRSWTLSKTQVALGEDYDG----------NTDRISNMEHKDKQSITNTPNFVPN---- 499
LF + +G Y+G + D + H D++ I +
Sbjct: 409 TLFHDMVEENVEPNMG-TYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEA 467
Query: 500 -SHYSSFDK---------RFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPN 547
+S+++ KPT TYN L M A Y +A+M +M G++ +
Sbjct: 468 YGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARD 527
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ +I+ G E A++ + + PD + + V + + ++ F
Sbjct: 528 RDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFR 587
Query: 608 EMKHYQIQPNLVTYITLLR--ARS-RYGSLHEV 637
E++ I P+++ Y ++ ARS R+ +EV
Sbjct: 588 EIRASGILPSVMCYCMMIAVYARSNRWDDAYEV 620
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP + + +G+ AL ++ + S P + ++I++ G Y +S
Sbjct: 454 IVPSTKA-YTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKES 512
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + V + FN ++ +F ++ Y ++K D ++ +L
Sbjct: 513 EAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSV 572
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E + E++ A G+L V Y ++ V+A + W A +V ++M++
Sbjct: 573 YCTAGLVDESEEQFREIR---ASGILP-SVMCYCMMIAVYARSNRWDDAYEVLDEMVTNK 628
Query: 394 VTPNTITWSSLINA----CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ ++ +N +VE ++F+++ GC + N LL+A Q
Sbjct: 629 VSNIHQVVGKMMKGDYDDYSNWQMVE---YVFDKLNSEGCGLGMRFYNTLLEALWWLGQK 685
Query: 450 DRAFRLF 456
+RA R+
Sbjct: 686 ERAARVL 692
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 102/235 (43%), Gaps = 9/235 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G + ++ I + + + + + ++ + L +
Sbjct: 421 PNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVM 480
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN L+ G L +E + + GV + D +++ +++
Sbjct: 481 FNTMNEMGSKPTVETYNSLINMFARGG---LYKESEAIMWKMGESGVAR-DRDSFNGVIE 536
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++ A+K ++ A P+ T+ ++++ AGLV+++ F E+ +G P
Sbjct: 537 GYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILP 596
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKT---QVALGEDYDGNTDRISNME 483
+ C +++ + ++D A+ + +K +G+ G+ D SN +
Sbjct: 597 SVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQ 651
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 223 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 282
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 283 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 343 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 455
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 456 --------------------------DEMRESNCPL------------------GTTTYN 471
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 472 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 531
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 532 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 592 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 637
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L + LA VK + A G L+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 572
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 632
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 633 MITSGCAPDRKARAMLRSA 651
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 192/436 (44%), Gaps = 66/436 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRAIYE 280
F + + GK D+V R D K L+S P++ T+I++ G +++ I
Sbjct: 170 FTTLLIQLGK-FDMVDLAR--DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 281 DLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + N + + SL+ + H+L ++ M K G + +Y+ L+ C G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ E+ KG+ + V+TY+ + DA A+++ M G PN
Sbjct: 287 RLEEAMDMLEEMVQ---KGI-EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFR 457
T+++LI+ + G E A+ L+ +ML G P + N L+ Q CVE +F+ AF +F+
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG-RFETAFTIFK 401
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
W LS + P+T T
Sbjct: 402 -WMLSHGSL----------------------------------------------PSTQT 414
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++K C D + + ++M G SPN I++ LI GN+ A+++L+IM+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+G+ PD YT I R +L+ A SLF M + I PN VTY ++ Y +L
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG---YFNLA 531
Query: 636 EVQQCLAVYQDMWKAG 651
+V LA++ M ++G
Sbjct: 532 KVDDALALFWKMVESG 547
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 172/436 (39%), Gaps = 50/436 (11%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK PN+ +I G + + +Y + + + +N+L+N + +F
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++K M G + +YN ++K CL G+ A I+ ++ K +V T
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM----LKAGSSPNVIT 449
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + A+++ E M G+ P+ T++ LI+ + G +E A LF M+
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN ++ + D A LF W + V G T +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALF--WKM----VESGNLPSSQTYNVMISGFS 563
Query: 486 DKQSITNTPNF---------VPNS-HYSSF--------------------DKRFSFKPTT 515
SI+ NF +PN Y+SF +KR F P
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF-PNL 622
Query: 516 TTYNILMKACCTDYYRVKA----LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY+ L+ C + A L+ + G PN ++T L+ G G A Q++
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M++ G+ P Y + ++ +++ A ++F M Q +L Y L+ A +
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 632 GSLHEVQQCLAVYQDM 647
+ E Q ++Q M
Sbjct: 743 NFIEEAQ---CIFQTM 755
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 177/386 (45%), Gaps = 33/386 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++ + S V N+Y +N L+ H K L + ++M+ G ++ +YN L+
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHR-KEALSILRDMRGAGCGPNVVTYNTLV 192
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A AG A+ + G + G LK ++ T++++V A + A KV ++M+
Sbjct: 193 AAFFRAGEVDGAERLVG----MMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +++++L+ AG +A+ +F EM Q G P+ L+ +A +
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308
Query: 452 AF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R R L +V DG + F+ ++ + R
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKK----------------GFLDDALLAVRGMR 352
Query: 509 -FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP+ YN L+ C + L++EM GL P+ ++++ +I A + +
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ + M E G+ PD + Y++ I+V KRL A LF+ M +QP+ TY +L+
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V++ L+++ M KAG
Sbjct: 473 DGHCKEGN---VERALSLHDKMVKAG 495
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 33/418 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
L SA R +D+ +PN+Y +I +CG G ++ +I D+R N+ +N
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGR-GHRKEALSILRDMRGAGCGPNVVTYN 189
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L+ A ++ + M G+ ++ ++N ++ C AG A++++ E+
Sbjct: 190 TLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM--- 246
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L D +Y+T+V + A AL V +M G+ P+ +T++SLI+ AG
Sbjct: 247 -MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQV---A 467
+E A+ L +M + G + N L+ + D A R R + + V A
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365
Query: 468 LGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------- 512
L Y D + + ME K + T + + +++ + D +F+
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 513 --PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+ L++ C + A L M +GL P+ ++T LID GNVE AL
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ M + G+ PDVV Y+ I +S R +A L ++ H + P Y L+
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 149/372 (40%), Gaps = 65/372 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I V G+ + + +R + + +N F +L++ L L
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + + YN L+ C+ G A+E+ E +EAKG LK DV TYSTI+
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE---MEAKG-LKPDVVTYSTIIS 403
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LF+ M++ G +P
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------ 485
+ + T + G +GN +R ++ K
Sbjct: 464 DE---------------------------FTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Query: 486 --DKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKAC----------C 526
D + + N + S + ++ FK P T Y+ LM C
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556
Query: 527 TDYYRVKALMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGM 579
+ +K LMNE V S +W ++LI +GNV AL K M + G
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616
Query: 580 SPDVVAYTTAIK 591
+P+ + + I+
Sbjct: 617 APNSTSTISLIR 628
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 161/373 (43%), Gaps = 21/373 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F + F KK L AL A ++ P++ +I+ + G ++R +
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + ++ ++++++ D E+ + M + GV+ D +Y+ L++
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR------ 438
Query: 339 NTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
VL +E H+ K ++KL D FTY++++ + AL + + M+ AGV
Sbjct: 439 --VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+S LIN + + +A L ++ P + + L+ C +A +
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKA-ELKSVLA 555
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-SFDKRF---S 510
L + + + + Y DR N++ + + N + SF K+
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +T+ L++ + V+A ++ ++ + + LID GNV+ L
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675
Query: 569 QILKIMREDGMSP 581
+L M +DG+ P
Sbjct: 676 DVLHGMAKDGLLP 688
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYN-ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+ YN +L+ + + M + G++PN ++ ILI A G G+ + AL
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
IL+ MR G P+VV Y T + R+ + A L M ++PNLVT+ +++
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G + + ++ V+ +M + G
Sbjct: 231 CKAGKMEDARK---VFDEMMREG 250
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 157/677 (23%), Positives = 282/677 (41%), Gaps = 78/677 (11%)
Query: 4 VFGSSSSSSSAIVATQTRLYN-HRNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLST 62
VF S +S +QT L + HR + + HP L P ++S L + +LL
Sbjct: 105 VFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLLF 164
Query: 63 VRRDLSSRNDYYA-DMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIV 121
+ D SS++ + L K GR + +++ + + S ++ E+V SG
Sbjct: 165 NQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSG-- 222
Query: 122 KSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL----------KN-------EC-Q 163
+S +G VVG++ KL E GV P GFKL KN C
Sbjct: 223 RSFPDGE---VVGLVAKLGERGVFP------DGFKLTQLVGKLCGDQKNGVAWEVLHCVM 273
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL 223
RL + + L+ L R +K ++E ++ +P V +
Sbjct: 274 RLGGAVDAASCNALLTWLGRGR-DIKRMNELLAEMEKRKIRPSV--------------VT 318
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSS------PNMYICRTIIDVCGIC--GDYMKS 275
F V K R + AL+ +D + S P++ + T+ID G+C G
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLID--GLCKVGKEEDG 376
Query: 276 RAIYEDLRSQNVTL-NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ E+++ N+ N +N L++ A + E+++ M + GV ++ + N L+
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A E + E+K KG LK + TY+ ++ F A++ E+MLS+
Sbjct: 437 GLCKHGRVHRAVEFFNEMK---GKG-LKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +P+ + + SLI+ AG + A + ++ AG + C N+L+ + + +R
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ L + + D IS + T +F S + +
Sbjct: 553 YELLTEME----ETGVKPDTITYNTLIS--------YLGKTGDFATASKVMEKMIKEGLR 600
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P+ TY ++ A C+ + + EM T + PN + + ILIDA + +V+ A+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+++ M+ + P+ Y +K K L +AF L + M +P+ +T L S
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLS 720
Query: 630 RYGSLHEVQQCLAVYQD 646
G + +++ + YQD
Sbjct: 721 AVGEIEKLKHFVEGYQD 737
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 162/380 (42%), Gaps = 42/380 (11%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG---- 357
D+K E+ M+K + + ++ IL+ C A A +++ L KG
Sbjct: 294 GRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF---DRLRGKGGSNW 350
Query: 358 -VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT-PNTITWSSLINACANAGLVE 415
++ DV ++T++ + L + E+M + PNT+T++ LI+ AG +
Sbjct: 351 VGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFD 410
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKTQVALG 469
+A LF +M + G +PN N L+ + + RA F + T AL
Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALI 470
Query: 470 EDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYS------------------SFDKRFS 510
+ G + M+ ++ S +P+ V +YS S K
Sbjct: 471 SAFCGVNNINRAMQCFEEMLSSGCSPDAV--VYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F + YN+L+ C RV L+ EM G+ P+ I++ LI G +G+ A
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRA 627
++++ M ++G+ P VV Y I K + + +F EM ++ PN V Y L+ A
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648
Query: 628 RSRYGSLHEVQQCLAVYQDM 647
R ++V + +++ +DM
Sbjct: 649 LCRN---NDVDRAISLMEDM 665
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 125/318 (39%), Gaps = 48/318 (15%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G + E+ G V L +GV D F + +V + +A +V ++ G
Sbjct: 221 SGRSFPDGEVVGLVAKLGERGVFP-DGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV 279
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + ++L+ +++ L EM + P+ IL+ +A + D A ++F
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
D+ N+V +P
Sbjct: 340 -----------------------------DRLRGKGGSNWV------------GVEPDVV 358
Query: 517 TYNILMKACCTDYYRVK--ALMNEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKI 573
+N L+ C +L+ EM+ ++ PN +++ LID +GN + A ++ +
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E+G+ P+V+ T + + R+ +A F EMK ++ N TY L+ A +
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 634 LHEVQQCLAVYQDMWKAG 651
++ QC +++M +G
Sbjct: 479 INRAMQC---FEEMLSSG 493
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + R +AL +++ +P +I G ++ A++ E
Sbjct: 90 LFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEF 149
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 150 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 209
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 210 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 265
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F+ M + G EP+ N L+ A + + DRA LF
Sbjct: 266 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF--- 322
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D+ +N P TTTYN
Sbjct: 323 --------------------------DEMRESNCP------------------LGTTTYN 338
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + + V+A++ EM+ GL PN I++T L+D G SG
Sbjct: 339 IMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKAD 398
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 399 GLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 458
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK ++P+++TY TL++A R + + ++ +Y++M +G
Sbjct: 459 FSVLQFMKENGLRPDVITYTTLMKALIR---VEQFEKVPVIYEEMITSG 504
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 36/259 (13%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D F N + FGK L A+ A+D ++ P++ T+ID G + ++
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL----- 330
+++++R N L +N ++N+ + ++ + M++ G++ ++ +Y L
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 380
Query: 331 --------------LKACCLAGNTV-------------LAQEIYGEVKHLEAKGVLKLDV 363
+KA L ++ LA VK + A G L+
Sbjct: 381 RSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADG-LEAST 439
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++++ F + + A V + M G+ P+ IT+++L+ A E+ ++EE
Sbjct: 440 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEE 499
Query: 424 MLQAGCEPNSQCCNILLQA 442
M+ +GC P+ + +L A
Sbjct: 500 MITSGCAPDRKARAMLRSA 518
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 56/442 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYIC---RTIIDVCGICGDYMKSR 276
I + V K D VSAL ++ H+ PN+ I R + G C S
Sbjct: 215 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK-PNVVIWPLERRTCMINGFCSSGRWSE 273
Query: 277 A---IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
A + E L + ++ ++ +N+L+N + KF E+Y M G++ +Y+ ++
Sbjct: 274 AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMI 333
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A+ ++ +L A D+ T++T++ + AK +K+ +M
Sbjct: 334 DGFCKQNRLDAAEHMF----YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG+ NTIT+++LI+ G + A L +EM+ +G PN CN LL + +
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +F++ SK + ++G
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNG------------------------------------V 473
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I++ +I ++ A Q
Sbjct: 474 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQ 533
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 534 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFR 593
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + L ++Q+M +G
Sbjct: 594 KVGN---INGALDIFQEMMASG 612
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 159/399 (39%), Gaps = 44/399 (11%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
D + GD ++SR + ++ F LM V L + +++ M+ V
Sbjct: 61 DAIDLFGDMVRSRPLP----------SVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ S+ IL+K C A +G++ L V T+ST++
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLG----FHPTVVTFSTLLHGLCVEDRISE 166
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL D+ PN +T+++L+N G V +A+ L + ML+ G +PN ++
Sbjct: 167 AL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ A L R E+ + + + + N F +
Sbjct: 223 GMCKMGDTVSALNLLRKM----------EEVSHIKPNVVIWPLERRTCMIN--GFCSSGR 270
Query: 502 YSSFDK-------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWT 552
+S + R P TYN L+ A + ++ + L +EM G+ P+ I+++
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYS 330
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID ++ A + +M G SPD++ + T I R+KR+ L EM
Sbjct: 331 SMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA 390
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ N +TY TL+ + G L+ Q L Q+M +G
Sbjct: 391 GLVANTITYTTLIHGFCQVGDLNAAQDLL---QEMVSSG 426
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 54/246 (21%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD ++ + +++ S V N+ N+L++ + LK LE++K MQK
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TY++++
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYNSVIH 520
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--------------- 416
A ++ + M S +PN +T+++LIN AG V+
Sbjct: 521 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 580
Query: 417 --------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
A+ +F+EM+ +G P++ +L + RA +
Sbjct: 581 NAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Query: 457 RSWTLS 462
+S
Sbjct: 641 EDLQMS 646
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 194/448 (43%), Gaps = 53/448 (11%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D+ A+ + + SP +I G G ++ AI+E+L
Sbjct: 258 LLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEEL 317
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + +N+L+ V LK + M++ G D +Y++L+ A AG
Sbjct: 318 KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRW 377
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA GV + + + +S I+ + D WQ + +V +M ++GV+P+
Sbjct: 378 ESARIV---LKEMEASGV-RPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHF 433
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ A+ F+ M G +P++ N L+ ++ ++A LF +
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA-- 491
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY-- 518
M+ T T N + N SF ++ ++ T
Sbjct: 492 ---------------------MQESGCSPCTTTYNIMIN----SFGEQERWEDVKTLLGK 526
Query: 519 --------NILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGN 563
N++ D Y + M++VGL P+ + LI+A G
Sbjct: 527 MQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGL 586
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E A+ ++MR DG+ P V+ + I +R +AFS+ + MK ++P++VTY T
Sbjct: 587 SEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTT 646
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++A R +V AVY++M +G
Sbjct: 647 LMKALIRVEKFDKVP---AVYEEMTLSG 671
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 163/380 (42%), Gaps = 58/380 (15%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ TL +N+L+ A DL+ L + M++ G +D +Y+ +
Sbjct: 166 RSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFI 225
Query: 331 LKACCLA--GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ ++ + Q+IY E++ ++LD + I+ FA + A+
Sbjct: 226 IQSLTRTNKSDSSMLQKIYAEIE----SDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAM 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ G++P T T ++I A NAG E+A +FEE+ + G P ++ N LL+ V+
Sbjct: 282 VQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
KD +SI S +R
Sbjct: 342 L-----------------------------------KDAESIV------------SEMER 354
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P TY++L+ A + + ++ EM G+ PN ++ ++ + G +
Sbjct: 355 SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 414
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ Q+L+ MR G+SPD Y I + L A + F+ M+ +QP+ VT+ TL+
Sbjct: 415 SFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLID 474
Query: 627 ARSRYGSLHEVQQCLAVYQD 646
+ G ++ ++ Q+
Sbjct: 475 CHCKSGHHNKAEELFEAMQE 494
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTL 309
SP+ + +ID G C + A ++ +R + V + +N+L++ + H K
Sbjct: 428 SPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNK-AE 486
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----EAKGVLKLDVFT 365
E+++ MQ+ G +YNI++ N+ QE + +VK L +++G+L +V T
Sbjct: 487 ELFEAMQESGCSPCTTTYNIMI-------NSFGEQERWEDVKTLLGKMQSQGLLA-NVVT 538
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T+V ++ + ++ A++ E M S G+ P++ +++LINA A GL EQA++ F M
Sbjct: 539 YTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G +P+ N L+ A GED +
Sbjct: 599 ADGLKPSVLVLNSLIN-------------------------AFGED------------RR 621
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D ++ + + K KP TY LMKA + +V A+ EM G
Sbjct: 622 DAEAFS----------VLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671
Query: 544 LSPNHISWTILIDA 557
+P+ + +L A
Sbjct: 672 CTPDRKARAMLRSA 685
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 213/503 (42%), Gaps = 86/503 (17%)
Query: 129 IDCVVGVLKKLNELGVAPLELFDGSG---FKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+D +V K E+ +A LE FD +G F+L C +L S E +G++E +
Sbjct: 162 VDMLVWAYVKNGEMDLA-LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV---- 216
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
KE+ ++ VN ++ I C V + F K D+V ++A+
Sbjct: 217 --YKEMIRR----RIGVNVVTFDVVINGLCKVGK-----------FQKAGDVVEDMKAWG 259
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
S P++ TIID G K+ A+ +++ ++ + N FN L++ D
Sbjct: 260 FS------PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 306 KFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
T +V++ MQ+ G+ ++ +YN L+ C G E G + G LK +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL---DEALGLQDKMSGMG-LKPNV 369
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ ++ F K + A ++ +D+ G+ PN IT+++LI+A AG ++ A L
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML G PN N L+ V C+ K L ++ +GN
Sbjct: 430 MLDTGVCPNVSTYNCLI---VGFCREGNV----------KEARKLAKEMEGN-------- 468
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K TYNIL+ A C KA L++EM
Sbjct: 469 --------------------------GLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
VGL+P+H+++ LID GN AL + +M + G ++V Y IK +L++
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 562
Query: 602 AFSLFEEMKHYQIQPNLVTYITL 624
A L EM + PN TY L
Sbjct: 563 ANRLLNEMLEKGLIPNRTTYDIL 585
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 56/343 (16%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M + + ++ ++++++ C G A ++ V+ ++A G V TY+TI+
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV---VEDMKAWG-FSPSVITYNTII 271
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A + ++M++ + PN IT++ LI+ V A +FEEM + G +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L+ + D A L D++S M
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGL--------------------QDKMSGM-------- 363
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
KP TYN L+ C + +++++ GL+PN
Sbjct: 364 -------------------GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ LIDA G +G ++ A + +M + G+ P+V Y I R +K+A L +E
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ ++ +LVTY L+ A + G E ++ + + +M++ G
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKG---ETRKAVRLLDEMFEVG 504
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F KK+ L A D K +PN+ T+ID G G + + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 287 VTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +N L+ ++K ++ K M+ G+ AD+ +YNIL+ A C G T A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ E+ + L TY+ ++ + AL V+ M G N +T++ L
Sbjct: 495 RLLDEMFEVG----LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL 550
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
I N G +E+A L EML+ G PN +IL +E
Sbjct: 551 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 591
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V+++ EM + N +++ ++I+ G + A +++ M+ G SP V+ Y T I
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ +A +L +EM +I PN +T+ L+ R ++ ++ V+++M + G
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKK---VFEEMQRQG 329
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 195/449 (43%), Gaps = 48/449 (10%)
Query: 215 CIVPRADIL----FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGIC 269
C+ P + L F +EF ++ D +LR + ++ + PN +I +I + G
Sbjct: 90 CLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGRE 149
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G K R +++++ S V +YV+ +++N + +F +LE+ M++ V + +Y
Sbjct: 150 GLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTY 209
Query: 328 NILLKACCLAG---NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
N ++ AC G +L ++ E++H +G+ + DV TY+T++ A A
Sbjct: 210 NTVINACARGGLDWEGLLG--LFAEMRH---EGI-QPDVITYNTLLGACAHRGLGDEAEM 263
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +G+ P+ T+S L+ +E+ L EM G P+ N+LL+A
Sbjct: 264 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYA 323
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYD---------GNTDRISNMEHKDKQSITNTPN 495
E A +FR + VA Y G D + ++ + K S T+
Sbjct: 324 ELGSIKEAMDVFRQMQAAGC-VANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTD--- 379
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
P TYNIL++ Y V L ++M + PN ++
Sbjct: 380 -----------------PDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 422
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI ACG G E A +IL M E G+ P AYT I+ ++ ++A +F M
Sbjct: 423 LIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P + TY + + A +R G E + L+
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILS 511
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 28/442 (6%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R ++ + +G+ ++L + K+ SP++ T+I+ C G D+
Sbjct: 167 VARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGL 226
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + ++ +N+L+ AH L E V++ M + G++ D+ +Y+ L++
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 286
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G +++ ++ +E+ G L D+ +Y+ +++ +A+ + A+ V M +AG
Sbjct: 287 F---GKLNRLEKVSELLREMESGGNLP-DITSYNVLLEAYAELGSIKEAMDVFRQMQAAG 342
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
N T+S L+N G + +F EM + +P++ NIL+Q E F
Sbjct: 343 CVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV 402
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNSHYSSFDKRF 509
LF + + E Y+G ++D + I N VP+S
Sbjct: 403 TLFHDMVEENVEPNM-ETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSS--------- 452
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
K T +A Y + N M VG +P ++ I A G + A
Sbjct: 453 --KAYTGVIEAFGQAAL--YEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEA 508
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL M E G+ DV ++ IK + + ++A + EM+ +PN +T +L S
Sbjct: 509 ILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVL---S 565
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
Y S V + +Q++ +G
Sbjct: 566 VYCSAGLVDESEEQFQEIKASG 587
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 27/340 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+S D+ S NV L Y +K ++V++ MQ G +A+ A+Y++LL
Sbjct: 303 MESGGNLPDITSYNVLLEAYA-------ELGSIKEAMDVFRQMQAAGCVANAATYSVLLN 355
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G ++I+ E+K D TY+ +++VF + +++ + + DM+
Sbjct: 356 LYGKHGRYDDVRDIFLEMKVSNTDP----DAGTYNILIQVFGEGGYFKEVVTLFHDMVEE 411
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V PN T+ LI AC GL E A + M + G P+S+ +++A +A ++ A
Sbjct: 412 NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEA 471
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F + + + E Y+ + +K+ ++I + N
Sbjct: 472 LVVFNTMNEVGSNPTV-ETYNSFIHAFARGGLYKEAEAILSRMN------------ESGL 518
Query: 512 KPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
K ++N ++KA +A+ + EM PN ++ +++ +G V+ + +
Sbjct: 519 KRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEE 578
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ++ G+ P V+ Y + + ++ RL A++L +EM
Sbjct: 579 QFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I GL+++
Sbjct: 97 KLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCR 156
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G ++ A QF + L +R
Sbjct: 157 EVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGM---------------KQER 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+S P+ TYN ++ AC D+ + L
Sbjct: 202 VS--------------------------------PSILTYNTVINACARGGLDWEGLLGL 229
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ I++ L+ AC G + A + + M E G+ PD+ Y+ ++ +
Sbjct: 230 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 289
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL++ L EM+ P++ +Y LL A Y L +++ + V++ M AG
Sbjct: 290 LNRLEKVSELLREMESGGNLPDITSYNVLLEA---YAELGSIKEAMDVFRQMQAAG 342
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 25/300 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G Y ++ I + + + + + ++ + L V
Sbjct: 415 PNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVV 474
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN + A G L +E + + G LK DV +++ ++K
Sbjct: 475 FNTMNEVGSNPTVETYNSFIHAFARGG---LYKEAEAILSRMNESG-LKRDVHSFNGVIK 530
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F ++ A+K +M A PN +T +++ +AGLV+++ F+E+ +G P
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590
Query: 432 NSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ C ++L + + + A+ L + +S +G+ G+ D SN +
Sbjct: 591 SVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQ----- 645
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
I NS RF YN L++A + R +A ++NE GL P
Sbjct: 646 -IVEYVFDKLNSEGCGLGMRF--------YNALLEALWWMFQRERAARVLNEASKRGLFP 696
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP + + + FG+ AL ++ + S+P + + I G Y ++
Sbjct: 448 IVPSSKA-YTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEA 506
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
AI + + +++ FN ++ ++ ++ Y M+K + + ++L
Sbjct: 507 EAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSV 566
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG ++E + E+K A G+L V Y ++ ++A A + ++M++
Sbjct: 567 YCSAGLVDESEEQFQEIK---ASGILP-SVMCYCLMLALYAKNDRLNDAYNLIDEMITMR 622
Query: 394 VTPNTITWSSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V+ +I +N +VE ++F+++ GC + N LL+A Q
Sbjct: 623 VSDIHQGIGQMIKGDFDDESNWQIVE---YVFDKLNSEGCGLGMRFYNALLEALWWMFQR 679
Query: 450 DRAFRLF 456
+RA R+
Sbjct: 680 ERAARVL 686
>gi|298707694|emb|CBJ26011.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1173
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 161/384 (41%), Gaps = 78/384 (20%)
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I ++N+ + + L V++ MQ GV D SY ++ AC G A +
Sbjct: 165 RIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALALL 224
Query: 348 GEVKHL------------------------EAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
E+K + G D+ Y+ ++K A K WQ A+
Sbjct: 225 AEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAI 284
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQA 442
++ +DM +AGV PN + ++ ++ACA G V +A L +EM + G P + N ++
Sbjct: 285 RLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYGVAPEVRSYNSVISG 344
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
A ++ A L + ME D +PN
Sbjct: 345 HERAGEWREALALAK-----------------------RMEQAD--------GVLPN--- 370
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
T+N ++ AC T +AL + +R GL P+ IS+ I AC
Sbjct: 371 ------------VVTFNSVIGACKTAGRPEEALAVLGMLRRKGLQPDVISFNSAIGACAS 418
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM---KHYQIQPN 617
G E ALQ+L++M +G++PD++ Y A+ CV+ + + A SLF+E+ ++P+
Sbjct: 419 GGKWEVALQLLELMPSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPD 478
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
L TY TL+ S G L + L
Sbjct: 479 LYTYNTLMTVFSDAGMLPRALELL 502
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 196/453 (43%), Gaps = 77/453 (16%)
Query: 217 VPRADILFCNFVRE---FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
P D+L V + +GK+ A+R D +PN+ + T + C CG
Sbjct: 259 APAPDLLLYAVVMKACAWGKR--WQQAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVS 316
Query: 274 KSRAIYEDLRSQ-NVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKL-GVMADMASYNI 329
++ + ++++ + V + +NS+++ + A + + L + K M++ GV+ ++ ++N
Sbjct: 317 RATQLLQEMQEKYGVAPEVRSYNSVISGHERAGEWREALALAKRMEQADGVLPNVVTFNS 376
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ AC AG A + G ++ KG L+ DV ++++ + A W++AL++ E M
Sbjct: 377 VIGACKTAGRPEEALAVLGMLRR---KG-LQPDVISFNSAIGACASGGKWEVALQLLELM 432
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE---PNSQCCNILLQACVEA 446
S GVTP+ +T++ ++AC G E AM LF+E++ +G E P+ N L+ +A
Sbjct: 433 PSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPDLYTYNTLMTVFSDA 492
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
RA L E K K+
Sbjct: 493 GMLPRALELLE-------------------------EAKAKR------------------ 509
Query: 507 KRFSFKPTTTTYNILMKAC----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+P TY+ L++AC + L+++M G+ PN+ ++ + + G S
Sbjct: 510 ----LRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSA 565
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM----KHYQIQPNL 618
L +L+ M G PD + Y +KV R ++A LFEEM + + P +
Sbjct: 566 RPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAI 625
Query: 619 V--TYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
TY +RA R G E L D W+
Sbjct: 626 AEETYCCGIRALERLGKWSEAVALL----DQWR 654
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 171/463 (36%), Gaps = 87/463 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I C G ++ A+ LR + + ++ FNS + A K+ L++
Sbjct: 369 PNVVTFNSVIGACKTAGRPEEALAVLGMLRRKGLQPDVISFNSAIGACASGGKWEVALQL 428
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ M GV D+ +YNI L AC G +A ++ E+
Sbjct: 429 LELMPSEGVTPDLMTYNIALDACVKGGQWEMAMSLFDELVASGDESLRPDLYTYNTLMTV 488
Query: 351 --------KHLE----AKGV-LKLDVFTYSTIVKVFADAKWWQ--MALKVKEDMLSAGVT 395
+ LE AK L+ DV TYST+++ + Q +ALK+ DM + GV
Sbjct: 489 FSDAGMLPRALELLEEAKAKRLRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEAEGVR 548
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC----------------CNIL 439
PN T+ + + + + + L M G P++ C ++L
Sbjct: 549 PNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLL 608
Query: 440 LQACVEA---------------CQFDRAFRLFRSWTLSKT---QVALGEDYDGNTDRISN 481
+ VE C RA W+ + Q YD + DR+ +
Sbjct: 609 FEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYD 668
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
++ + ++ + K T+ I+ A A+M M +
Sbjct: 669 QWYRALRLLST----------GGLPEETDVK--TSRAAIVSAARGGLVEDALAIMRSMES 716
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G + + I+A +G E L++ M G+ PDV+ Y A + C R
Sbjct: 717 RGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAG 776
Query: 602 AFSLFEEMKHYQIQPNLVTYIT---LLRARSRYGSLHEVQQCL 641
A S E + P T+ T L R RY L ++++ +
Sbjct: 777 AISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELM 819
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN ++A C + ++ EM++ G+ P+ S+ ++ AC G + AL +
Sbjct: 164 PRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALAL 223
Query: 571 LKIMR---------------------------EDGM-SPDVVAYTTAIKVCVRSKRLKQA 602
L M+ EDG +PD++ Y +K C KR +QA
Sbjct: 224 LAEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQA 283
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L ++M + PN+V T L A ++ G + Q L Q+
Sbjct: 284 IRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQE 327
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 114/270 (42%), Gaps = 31/270 (11%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K +E + G P +++ + A A+ +F EM G +P+ ++ AC
Sbjct: 152 KYREAKVLKGELPRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSAC 211
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + +KT +AL ++ M+ + +Q
Sbjct: 212 SKRGE-------------AKTALAL----------LAEMKARRRQQQQQQQQQRAGGGPG 248
Query: 504 SF----DKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ D+ + P Y ++MKAC + + L+++M G++PN + + A
Sbjct: 249 GYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAIRLLDDMSAAGVAPNVVVVNTALSA 308
Query: 558 CGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQ 615
C G V A Q+L+ M+E G++P+V +Y + I R+ ++A +L + M+ +
Sbjct: 309 CAKCGQVSRATQLLQEMQEKYGVAPEVRSYNSVISGHERAGEWREALALAKRMEQADGVL 368
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
PN+VT+ +++ A G E L + +
Sbjct: 369 PNVVTFNSVIGACKTAGRPEEALAVLGMLR 398
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 21/339 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P++VTY T++ G LHEV+ A+Y M + G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEG 500
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 158/389 (40%), Gaps = 37/389 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ +I FN L++ V + + K M+ LG+ D+ ++NI++ C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
LA I G++ L + D T ++V F A+ + + M+ G
Sbjct: 132 CCFQVSLALSILGKMLKLGYEP----DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++++I++ V A F+E+ + G PN L+ + ++ A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKR 508
K T AL + + N + E ++ ++ P+ V YSS
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT---YSSLING 304
Query: 509 FSFKPTTTTYN-----ILMKACCTDYYRVKALMN----------------EMRTVGLSPN 547
N ++ K C D L+N EM GL N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI +G+V+ A + M G+SPD+ Y + + L++A +FE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+M+ ++ ++VTY T++R + G + E
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ LI+ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 21/339 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 339
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 340 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 399
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 400 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 454
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 455 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P++VTY T++ G LHEV+ A+Y M + G
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEG 603
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 35/363 (9%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ VT N + ++ A + + + M G D+ +Y +++ C G+T L
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + +++ +G L+ V Y+TI+ K AL + ++M + G+ PN +T+S
Sbjct: 854 AFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ N G A L +M++ P+ + L+ A V+ + A +L
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL------- 962
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------PTTT 516
YD R + S+ N F + + F F P
Sbjct: 963 ---------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMFEFMVSKHCFPDVV 1011
Query: 517 TYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+K C Y RV+ M EM GL N +++ ILI +G+ + A +I K
Sbjct: 1012 TYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 1070
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + TY ++ + G
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130
Query: 634 LHE 636
+ +
Sbjct: 1131 VED 1133
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 868 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 981
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 982 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 1075
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 1076 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 1175 EMKEDGTLPNSGCYNTLIRARLRDG 1199
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 65/380 (17%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 678 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 783
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 784 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D AF L ++ ME
Sbjct: 844 GLCKRGDTDLAFNL-----------------------LNKMEQG---------------- 864
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+P YN ++ C + AL EM T G+ PN ++++ LI
Sbjct: 865 --------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G A ++L M E ++PDV ++ I V+ +L +A L++EM I P++V
Sbjct: 917 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 976
Query: 620 TYITLLRARSRYGSLHEVQQ 639
TY +L+ + L E +Q
Sbjct: 977 TYSSLINGFCMHDRLDEAKQ 996
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 153/381 (40%), Gaps = 61/381 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ +I FN L++ V + + K M+ LG+ D+ ++NI++ C
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
LA I G++ L + D T ++V F A+ + + M+ G
Sbjct: 235 CCFQVSLALSILGKMLKLGYEP----DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++++I++ V A F+E+ + G PN L+ + ++ A RL
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+D I K+ IT P
Sbjct: 351 L-------------------SDMI-------KKKIT---------------------PNV 363
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+ L+ A + K L EM + + P+ ++++ LI+ ++ A Q+ +
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 634 LHEVQQCLA------VYQDMW 648
+ + Q+ + + D+W
Sbjct: 484 VDKAQEFFSQMDFFGISPDIW 504
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 155/382 (40%), Gaps = 55/382 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K + + AL + + PN+ ++I G + + + D+ + + +++
Sbjct: 882 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 941
Query: 293 VFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
F++L++ + K ++Y M K + + +Y+ L+ C+ A++++
Sbjct: 942 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF--- 998
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +K DV TY+T++K F K + ++V +M G+ NT+T++ LI
Sbjct: 999 EFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG + A +F+EM+ G PN N LL + + ++A +F SK +
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME----- 1112
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
PT TYNI+++ C
Sbjct: 1113 ------------------------------------------PTIYTYNIMIEGMCKAGK 1130
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
L + G+ P+ +++ +I G+ E A + K M+EDG P+ Y T
Sbjct: 1131 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 1190
Query: 589 AIKVCVRSKRLKQAFSLFEEMK 610
I+ +R + + L +EM+
Sbjct: 1191 LIRARLRDGDREASAELIKEMR 1212
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 997 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 1052
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 1144
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 1145 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 1186 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S ++ A + + + + E M + G+ N T+S LIN + A+ +
Sbjct: 695 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EPN + LL + + A L
Sbjct: 755 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-------------------------- 788
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
D+ +T ++P T T+N L+ AL++ M
Sbjct: 789 ---DQMFVT------------------GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 827
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P+ +++ ++++ G+ + A +L M + + P V+ Y T I + K +
Sbjct: 828 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 887
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
A +LF+EM+ I+PN+VTY +L+ YG + + L+
Sbjct: 888 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 181/419 (43%), Gaps = 59/419 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + + ++ A R DA + P+ Y ++I G+C G ++ +++
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI--SGMCKEGRLEEASGLFDK 268
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N +N+L++ N DL+ M K G+M +++YN+L+ A + G
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +
Sbjct: 329 MGEADDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D++S+ P T+N
Sbjct: 445 --------------------------DRKSV---------------------PPDEVTFN 457
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + L++EM+ G+ P+HIS+ LI G G+++ A + M
Sbjct: 458 TLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P ++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 518 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 53/339 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK E M+ LG ++ SYN ++ GN A+ I + + KG+ + D +
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI---LDAMRVKGI-EPDSY 244
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +++ + A + + M+ G+ PN +T+++LI+ N G +E+A +EM
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ G P+ N+L+ A LF + + D I M
Sbjct: 305 VKKGIMPSVSTYNLLVHA------------LFMEGRMGEAD-----------DMIKEMRK 341
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
K P TYNIL+ C + R L NEM +
Sbjct: 342 K------------------------GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK 377
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P H+++T LI ++ A + + + + G+SPDV+ + I + +++A
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F L +EM + P+ VT+ TL++ R R G + E + L
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 255 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG---YCNKGDLERAFSYRDEMVKKGIMP 311
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 312 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 360
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A RA+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ ++ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 421 FNAM--IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A V+++MLS G P +T+++LI
Sbjct: 479 MK---XRGI-KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLC 534
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 535 KNQEGDLAEELLKEMVNKGISPD 557
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + + M +G PN +S+ +I GN+EGA +IL MR G+ PD Y + I
Sbjct: 191 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 250
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ RL++A LF++M + PN VTY TL+ G L ++ + +M K
Sbjct: 251 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL---ERAFSYRDEMVKK 307
Query: 651 G 651
G
Sbjct: 308 G 308
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 39/301 (12%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
T I K ++W + + +S +TP I+ + L N C+ LV +H
Sbjct: 69 ITZEVISKSVLSSQWHFI------EQVSPNLTPALIS-NVLYNLCSKPQLVSDFIH---- 117
Query: 424 MLQAGC-EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--TQVALGEDYDGNTDRIS 480
L C + S C ++L A + + + A +L + ++ T L ++ + DR+S
Sbjct: 118 HLHPHCLDTKSYCLAVVLLARLPSPKL--ALQLLKQVMETRIATNRELFDELTLSRDRLS 175
Query: 481 N--------MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYY 530
+E K K++ + F + FKP +YN ++ + +
Sbjct: 176 VKSSIVFDLLEGKLKKA----------REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 225
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ +++ MR G+ P+ ++ LI G +E A + M E G+ P+ V Y T I
Sbjct: 226 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 285
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L++AFS +EM I P++ TY L+ A G + E + ++M K
Sbjct: 286 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI---KEMRKK 342
Query: 651 G 651
G
Sbjct: 343 G 343
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 196/421 (46%), Gaps = 35/421 (8%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I G+ + +++ + ++ N+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + ++ ++M G+ ++ SYN+++ C G +E+ +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G+TP+ IT++SLI++ A
Sbjct: 300 EMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +AM ++M G PN + L+ + + A+R+ R S + V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ + +P+ V S S F + +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L EM VGL P+ ++T LI+A G++
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ALQ+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY TL
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 625 L 625
+
Sbjct: 597 I 597
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 35/357 (9%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ F V+K M + V ++ +YNIL++ C AGN +A ++ + +E KG L +V
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK---METKGCLP-NV 240
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + + K+ M G+ PN I+++ +IN G +++ + E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGN 475
M + G + N L++ + F +A + ++ T + GN
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+R ME D+ + PN Y++ FS K + YRV
Sbjct: 361 MNRA--MEFLDQMRVRG---LCPNERTYTTLVDGFS-----------QKGYMNEAYRV-- 402
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM G SP+ +++ LI+ +G +E A+ +L+ M+E G+SPDVV+Y+T +
Sbjct: 403 -LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + +A + EM I+P+ +TY +L++ + ++ +Y++M + G
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQG---FCEQRRTKEACDLYEEMLRVG 515
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 316 QKLGVMADMASYNILLKACCLAG-NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
Q G M + SYN +L A + N A+ ++ E+ LE++ + +VFTY+ +++ F
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LESQ--VSPNVFTYNILIRGFC 216
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A +AL + + M + G PN +T+++LI+ ++ L M G EPN
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 435 CCNILLQA-CVEACQFDRAFRLF----RSWTLSK-TQVALGEDY--DGNTDRISNMEHKD 486
N+++ C E + +F L R ++L + T L + Y +GN
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF---------- 326
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
Q++ + R P+ TY L+ + C + R +++MR GL
Sbjct: 327 HQALVMHAEML----------RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++T L+D G + A ++L+ M ++G SP VV Y I + +++ A +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ E+MK + P++V+Y T+L R ++V + L V ++M + G
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRS---YDVDEALRVKREMVEKG 480
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 199/494 (40%), Gaps = 64/494 (12%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNF-----------VREFGKKRDLVSALRAYDAS 247
Q+ N N+ IR C D+ F V + D LR D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 248 KKHLSS-------PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
K L S PN+ +I+ G+C G + + ++ + +L+ +N+L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVIN--GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ F L ++ M + G+ + +Y L+ + C AGN A E +++ +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR---VR 374
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+T+V F+ + A +V +M G +P+ +T+++LIN G +E
Sbjct: 375 GLCP-NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + E+M + G P+ + +L + D A R+ R + + D +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGIKPDTITYS 489
Query: 477 DRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRV 532
I + + K++ + R P TY L+ A C D +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEML----------RVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ-ILKIMREDGMSPDVVAYT---- 587
L NEM G+ P+ +++++LI+ A + +LK+ E+ + DV +T
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 588 ----------TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ IK + +A +FE M +P+ Y ++ R G ++
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG---DI 656
Query: 638 QQCLAVYQDMWKAG 651
++ +Y++M K+G
Sbjct: 657 RKAYTLYKEMVKSG 670
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 21/355 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + + K ++ A+ D + PN T++D G ++ + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ + ++ +N+L +N H + +E V ++M++ G+ D+ SY+ +L C +
Sbjct: 406 MNDNGFSPSVVTYNAL--INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ A + E + KG+ K D TYS++++ F + + + A + E+ML G+ P+
Sbjct: 464 YDVDEALRVKRE---MVEKGI-KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LINA G +E+A+ L EM++ G P+ ++L+ + + A RL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SF 511
++ V Y + SN+E K S+ F + D+ F +
Sbjct: 580 KLFYEES-VPSDVTYHTLIENCSNIEFKSVVSLIK--GFCMKGMMTEADQVFESMLGKNH 636
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T YNI++ C D + L EM G + ++ L+ A G V
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 47/419 (11%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+V+ Y I
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + +A S F +M+ + PN+ Y L+ + G L+E Q ++ +M G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ---LFNEMVHKG 568
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 177/432 (40%), Gaps = 58/432 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K+ + A++ + + + N + +ID G + + ++
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ + N
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN I
Sbjct: 414 SEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++AC +G V +A+ + +++L +G +PN L+ +A D A
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI------ 523
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SH++ + P Y
Sbjct: 524 ----------------------------------------SHFNKM-RDLGLDPNVQAYT 542
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + +A L NEM G+S + + +T L+D GN+ A + M +
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ D+ YT I + +A +F EM + I P+ Y L+ S+Y L +
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI---SKYQKLGNL 659
Query: 638 QQCLAVYQDMWK 649
++ +++ +M +
Sbjct: 660 EEAISLQDEMER 671
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 39/295 (13%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ V AD A++ + V PNT T + ++ A LFE++
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA- 185
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRI 479
PN NI++ + + A LF ++ + G G D +
Sbjct: 186 ---PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ + ++S K TYN L+ C + R++
Sbjct: 243 EQLVEEMRRS--------------------GCKADVVTYNALINCFCK-FGRMETAYGYF 281
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
M+ G+ N ++++ +DA G V A+++ MR GM+ + YT I ++
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL A L +EM + N+VTY L+ + + E + L + M KAG
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM---MEKAG 393
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 36/372 (9%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F +VY+ M GV ++ SYNIL++ C AGN + + E +E L +V TY
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEE---MERNRCLP-NVVTY 241
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + K A K+ M G+ PN +T++ +IN G +E+ + EM +
Sbjct: 242 NTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDR 301
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDR 478
G P+ N L+ + F +A L ++ T + GN +R
Sbjct: 302 KGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNR 361
Query: 479 ISNMEHKDKQSITNT-PNFVP--------------NSHYSSFDK--RFSFKPTTTTYNIL 521
ME D+ + PN V + Y +D+ R F PT TYN L
Sbjct: 362 A--MEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C +A L+ M GLSP+ +S++ +I ++ A Q+ M E G+
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
SPD + Y++ I+ +RL +A LF+EM + + P+ TY +L+ + G L+E
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA-- 537
Query: 640 CLAVYQDMWKAG 651
L ++ +M K G
Sbjct: 538 -LNLHDEMIKKG 548
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 178/427 (41%), Gaps = 64/427 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI---YEDLR 283
+R F +L LR ++ +++ PN+ T+I G Y K + I ++ LR
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI------GAYCKLKRIDEAFKLLR 262
Query: 284 S---QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
S + + N+ +N ++N ++ T V M + G D +YN L+ C G
Sbjct: 263 SMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A ++ E+ + L DV TY++++ A A++ + M G+ PN
Sbjct: 323 NFHQALVLHSEM----LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T++SLIN + G +++A +++EM+++G P N LL + + + A L R
Sbjct: 379 VTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKRFSF 511
ME K +P+ V S Y D+ F
Sbjct: 439 -----------------------MEGKGL-----SPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 512 K---------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
P TY+ L++ C +A L EM L P+ ++T LI+
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCK 530
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++ AL + M + G PD V Y I + R ++A L ++ + + PN +T
Sbjct: 531 EGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590
Query: 621 YITLLRA 627
Y TL+ +
Sbjct: 591 YDTLIES 597
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 212/512 (41%), Gaps = 60/512 (11%)
Query: 109 SMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDS 168
++L+ MV +G+ R GRI+ GVL +++ G AP DG + L N ++
Sbjct: 272 NLLTYNMVINGLC---RVGRIEETSGVLAEMDRKGFAP----DGVTYNTLVNGYCKV--- 321
Query: 169 GEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFV 228
G + L + LP PDV + + + +
Sbjct: 322 GNFHQALVLHSEMLRNGLP-----------------PDV--------------VTYTSLI 350
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
K +L A+ +D PN ++I+ G ++ I++++
Sbjct: 351 NTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP 410
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
I +N+L+N + + ++ + + + M+ G+ D+ SY+ ++ C A ++
Sbjct: 411 PTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
E+ KGV D TYS++++ + + A + ++ML+ + P+ T++SLIN
Sbjct: 471 NAEMVE---KGV-SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLIN 526
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G + +A++L +EM++ G P++ N+L+ + + A RL ++ +
Sbjct: 527 GYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDES-I 585
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNI 520
G YD + S++E K ++ F + D+ F + KP YN+
Sbjct: 586 PNGITYDTLIESCSDIEFKSVVALIK--GFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA-LQILKIMRED 577
++ C D ++ L EM G P+ ++ L+ A G E L I I+R
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+S D +++ + + F+L EM
Sbjct: 704 KLS-DAELSKALVQINHKEGNIDAVFNLLTEM 734
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 510 SFKPTTTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P +YN ++ + C + + EM G+S N S+ ILI +GN+E
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
L+ + M + P+VV Y T I + KR+ +AF L M ++PNL+TY ++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 627 ARSRYGSLHEVQQCLA 642
R G + E LA
Sbjct: 282 GLCRVGRIEETSGVLA 297
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 21/339 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLVNG---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P++VTY T++ G LHEV+ A+Y M + G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEG 500
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 158/389 (40%), Gaps = 37/389 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ +I FN L++ V + + K M+ LG+ D+ ++NI++ C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
LA I G++ L + D T ++V F A+ + + M+ G
Sbjct: 132 CCFQVSLALSILGKMLKLGYEP----DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++++I++ V A F+E+ + G PN L+ + ++ A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKR 508
K T AL + + N + E ++ ++ P+ V YSS
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT---YSSLVNG 304
Query: 509 FSFKPTTTTYN-----ILMKACCTDYYRVKALMN----------------EMRTVGLSPN 547
N ++ K C D L+N EM GL N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI +G+V+ A + M G+SPD+ Y + + L++A +FE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+M+ ++ ++VTY T++R + G + E
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ L++ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 169/416 (40%), Gaps = 82/416 (19%)
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHD 304
+K+ PN++ +I C G++ S E +R + N +++++++ +
Sbjct: 136 TKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACERSDQ 195
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----------- 353
+ +++ + M++ G++ +YN ++ AC +G LA + E+ +
Sbjct: 196 WQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFAS 255
Query: 354 ---------EAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ VL++ D + Y+T + W ++ ++M S G
Sbjct: 256 AMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNG 315
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V + +T S I+ACA+ G QA L E+ML G PN L+ Q +RA
Sbjct: 316 VAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAI 375
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++ + + +PN
Sbjct: 376 KIL--------------------------------DLMRSKGVMPN-------------- 389
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY++ + AC ++ R AL+ EM G+SPN IS+ I ACG +G + AL ++
Sbjct: 390 -VRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLM 448
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M G+ VV Y TA+ C R+ K A L M+ QI+PN + Y +++A
Sbjct: 449 DEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKA 504
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 21/355 (5%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLA 343
V N+ +N+++ NA K +++ M K G+ ++ +Y L+ AC GN
Sbjct: 105 VEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNW--- 161
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ ++ + G L + YST++ + WQ A+K+ M G+ P T+T+++
Sbjct: 162 EDSVNYLEQMRQSG-LAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNT 220
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I+AC +G A+ L +EM GC P + AC A Q+ R+ +
Sbjct: 221 VISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDE 280
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
V D T I K + Y T ++ +
Sbjct: 281 VWV----DKYAYTTAIHAAGQLGK--------WARCVRYLDEMDSNGVAKDVVTVSVAIS 328
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
AC + + + L+ +M GL+PN I++T L+ G E A++IL +MR G+ P
Sbjct: 329 ACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMP 388
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V Y+ AI C +K ++A +L +EM+ + PN ++Y T +RA G L E
Sbjct: 389 NVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSE 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 162/387 (41%), Gaps = 31/387 (8%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T+I CG G + + ++ +++ F S M A L + MQ+
Sbjct: 220 TVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQED 279
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
V D +Y + A G E +++ GV K DV T S + AD
Sbjct: 280 EVWVDKYAYTTAIHAAGQLGKWARCVRYLDE---MDSNGVAK-DVVTVSVAISACADKGQ 335
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W A K+ EDML G+TPN IT++SL+ G E+A+ + + M G PN + ++
Sbjct: 336 WAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSV 395
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ AC +A ++ RA L + + + V+ E R D ++ + +
Sbjct: 396 AIAACADAKEWRRALALLKE--MEREGVSPNEISYNTAIRACG----DAGQLSEALDLM- 448
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ R K + TY + AC D+ L+ MR + PN I + +I
Sbjct: 449 ----DEMESR-GVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIK 503
Query: 557 ACGGSGN----------VEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
AC +G +E A+Q+ K+ S + +YT + R R ++A L
Sbjct: 504 ACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIML 563
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
F+EM+ +I P + Y +++RA R G
Sbjct: 564 FQEMEDRKIMPTVQCYTSVVRACERSG 590
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 165/413 (39%), Gaps = 66/413 (15%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + F + + + R LR D ++ + Y T I G G + +
Sbjct: 247 PPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVR 306
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACC 335
+++ S V ++ + ++ A ++ ++ ++M G+ ++ +Y L+
Sbjct: 307 YLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLR 366
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +I + + +KGV+ +V TYS + ADAK W+ AL + ++M GV+
Sbjct: 367 RGGQHERAIKI---LDLMRSKGVMP-NVRTYSVAIAACADAKEWRRALALLKEMEREGVS 422
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++++ I AC +AG + +A+ L +EM G + + + AC A + A L
Sbjct: 423 PNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALEL 482
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ +R +P
Sbjct: 483 LAAM-----------------------------------------------RREQIEPNE 495
Query: 516 TTYNILMKACCTDYYRVKALM------------NEMRT-VGLSPNHISWTILIDACGGSG 562
Y ++KACC KAL+ N+++ S S+T L+DA
Sbjct: 496 IVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTREL 555
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ A+ + + M + + P V YT+ ++ C RS + A L ++M+ +++
Sbjct: 556 RWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQYDVALRLLDDMRKKRMR 608
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ K +P TY L+ AC ++ + +MR GL+PN + ++ +I AC
Sbjct: 132 FREMTKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACE 191
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
S + A+++L+ MR DG+ P V Y T I C +S + A SL +EM P V
Sbjct: 192 RSDQWQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPV 251
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQD 646
T+ + + A R H V + + Q+
Sbjct: 252 TFASAMLACERARQWHHVLRIMDQMQE 278
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEG 566
+ +P +YN ++ AC R + + EM + G+ PN ++ LI AC GN E
Sbjct: 104 AVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWED 163
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
++ L+ MR+ G++P+ V Y+T I C RS + ++A L M+ I P VTY T++
Sbjct: 164 SVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVIS 223
Query: 627 ARSRYG 632
A + G
Sbjct: 224 ACGKSG 229
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 189/429 (44%), Gaps = 41/429 (9%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ F K+ L + ++ + SP+ +ID G ++ +YE++ S +
Sbjct: 15 LKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGL 74
Query: 288 TLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+IY +NSL+N + +K +E++K M + G D+ +Y+ ++ C G A E
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + H + + Y+ ++ + + A K+ E+M S G P+ IT+++++
Sbjct: 135 M---LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTIL 191
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------ 459
+ G V +A F+ M G P+ N LL A + + D A +LF+
Sbjct: 192 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 460 --TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T++ + LG N D M K S P T
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVAS--------------------GCAPNGAT 291
Query: 518 YNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y+I++ C D ++V + EM +G P+ +++ IL+D + V+ A ++
Sbjct: 292 YSIVLSGHCRAKKVDDAHKV---LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M ++G +PD+V+Y+ + ++ ++ A LF+ M ++ P++VT+ L+ + G
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408
Query: 633 SLHEVQQCL 641
L E + L
Sbjct: 409 KLDEAKDLL 417
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 16/290 (5%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+T+ ++K F + K+ E ML G++P+ I ++ LI+ A G V++A L+EE
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+ G EP+ N LL A + + A LF++ + D + IS +
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM----AEKGFEPDVVTYSTIISGLC 124
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
K +T + + ++ S T YN L+ C D R L+ EM +
Sbjct: 125 KTGK--VTEALEML---FHKMIERGCS--ANTVAYNALINGLCKDENIERAYKLLEEMAS 177
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P++I++ ++ G V A Q M G SPDVVAY + + + +
Sbjct: 178 KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDE 237
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A LF+++ P+ VTY ++L +R ++ E ++ +++ M +G
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE---MFKKMVASG 284
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 513 PTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T+ +++K+ C D Y+ L +M G+SP+ I + ILID G V+ A
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYK---LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ + M G+ P + Y + + + ++K+A LF+ M +P++VTY T++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 628 RSRYGSLHEVQQCL 641
+ G + E + L
Sbjct: 123 LCKTGKVTEALEML 136
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 6/225 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + +D+ SP++ ++D G ++ +++D+ ++ + +NS++
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262
Query: 300 VNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A ++ E++K M G + A+Y+I+L C A A ++ E+ + A
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
DV TY+ ++ A ++ M+ G P+ +++S ++N V A
Sbjct: 323 ----DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 378
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LF+ M++ P+ NIL+ +A + D A L T S
Sbjct: 379 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN ++ +++ + G + ++ + M ++G+SPD + Y I + R+ +A
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+EEM ++P++ TY +LL A + + E + +++ M + G
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME---LFKTMAEKG 108
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 56/417 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + +++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
YT I+ ++ ++A F M P++ TY +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILS 516
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 179/441 (40%), Gaps = 63/441 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++R + G+ D+ +YN LL AC
Sbjct: 232 LGLFAEMRHE---------------------------------GIQPDIVTYNTLLSACA 258
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G L E + + G++ D+ TYS +V+ F + + + +M S G
Sbjct: 259 IRG---LGDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSL 314
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +++ L+ A A +G +++AM +F +M AGC PN+ ++LL ++ ++D +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKD----KQSITNTPNFVPNSHYSSFDKRFSF 511
F S T D D T I + K+ +T + V +
Sbjct: 375 FLEMKSSNT------DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE----------NI 418
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TY ++ AC + + ++ M + P+ ++T +I+A G + E AL
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
M E G +P + Y + + R +K++ ++ + I N T+ + A
Sbjct: 479 AFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 630 RYGSLHEVQQCLAVYQDMWKA 650
+ G E + Y DM K+
Sbjct: 539 QGGKFEE---AVKTYVDMEKS 556
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 54/346 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G E++ E + ++GV +
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDE---MPSQGVSR-S 175
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ + M + ++P+ +T++++INACA GL E + LF
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLF 235
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +FR+ DG
Sbjct: 236 AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN------------DGGI----- 278
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
P+ SH T+ L + +V L++EM +
Sbjct: 279 -----------VPDLTTYSHL------------VETFGKLRR-----LEKVSDLLSEMAS 310
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +L++A SG+++ A+ + M+ G +P+ Y+ + + +S R
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
LF EMK P+ TY L+ G EV + ++ DM
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV---VTLFHDM 413
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N DK S P+ TYN ++ AC D+ + L
Sbjct: 202 MKN----DKIS-----------------------PSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG
Sbjct: 295 LRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAG 347
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 66/407 (16%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLK 306
SPN+Y +I G C G+ K + ++ N+ +N+L++ + D
Sbjct: 7 SPNVYTYNILIR--GFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
F L K+M G+ ++ SYN+++ C G+ A EI E+ + KG D TY
Sbjct: 65 FGL--LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY---KGFTP-DEVTY 118
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + AL + +M+ GV+P+ +T+++LIN+ A + +AM F++M
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN + L+ + A+R+ T S
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES------------------------ 214
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
F P+ TYN + C +AL + EM GL
Sbjct: 215 -----------------------GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ +S++ +I G ++ A Q+ + M E G+SPD V Y++ I+ +RL +A
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EM + P+ TY TL+ A G L+ + L ++ +M G
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLN---KALHLHDEMIHKG 355
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 36/411 (8%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F +L L + +++ PN+ T+ID G ++ + + + S+
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N+ +N ++N +K E+ + M G D +YN LL C GN A
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I+ E+ + + V TY+ ++ A+ A++ + M G+ PN T+++L
Sbjct: 136 VIHAEM----VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW----- 459
I+ + GL+ +A + EM ++G P+ N + + + A + +
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 460 ---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S + + G G DR M KQ + P
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQM----KQEMVEK----------------GVSPDAV 291
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ C +A L EM +GL P+ ++T LI+A G++ AL + M
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G PD V Y+ I + R ++A L ++ + + P+ VTY TL+
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 28/288 (9%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ + V+PN T++ LI + G +++ + F EM + GC PN N L+ A + +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 449 FDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDR----ISNMEHKDKQSITNTPNF 496
D AF L +S + Q L G +G+ + M +K T N
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 497 VPNSH--YSSFDK---------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + +F + R P+ TY L+ + C + R ++MR G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++T LID G + A +IL M E G SP VV Y I +R+++A
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +EM + P++V+Y T++ R G E+ + + Q+M + G
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKG---ELDRAFQMKQEMVEKG 285
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 167/412 (40%), Gaps = 71/412 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R+L A+ +D + PN T+ID G ++ I ++ + ++
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 293 VFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+ ++ + ++ L V + M + G+ D+ SY+ ++ C G A ++ E
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE- 280
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ KGV D TYS++++ + + A + ++ML G+ P+ T+++LINA
Sbjct: 281 --MVEKGV-SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A+HL +EM+ G P++ ++L+ + + A RL ++ V
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES-VPSDV 396
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
YD + SN+E FK L+K C
Sbjct: 397 TYDTLIENCSNIE---------------------------FKSVVA----LIKGFC---- 421
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+K LM+E A ++ + M E P Y I
Sbjct: 422 -MKGLMHE----------------------------ADRVFESMVERNHKPGEAVYNVII 452
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R L +AF+L++EM H P+ VT ITL++A + G E+ + +
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 291 IYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + KF + +Y NM+K G++ ++ +YNILLKA C A +++
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 349 EVKH--------------------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
E+ + E G K V Y+ ++ ++A
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVA 263
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K+ +M+ GV PN +++S +IN+ +G VE A LF +M GC+ N L++
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
C + A L++ + VA G S E +PN
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 500 -SHYSSFDKRFS-------------------FKPTTTTYNILMKACCTD--YYRVKALMN 537
+ YS F+ +P TY ++ C + + + +L+
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G +PN I++ I G+G VE A+++L+ M+ G P++ Y + R
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ ++AF LF+E++ +QPNLVTY T+L SR G + E Q
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 174/426 (40%), Gaps = 83/426 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
I C+ ++ F F + F LR DA N++ +I C + G
Sbjct: 286 INSLCVSGNVELAFALFAQMF---------LRGCDA--------NIHTFTPLIKGCFMRG 328
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++ + N+ +N+L++ + L+ L+V MQ+ G + ++ +Y+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ +G+ V A E + + + G + +V TY+ +V V + A + E
Sbjct: 389 ILIDGFAKSGDLVGASETW---NRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G TPNTIT+++ I G VE AM L E M GC PN N LL A +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++ AF LF+ +E ++ Q PN V
Sbjct: 505 YEEAFGLFQE-----------------------IEARNLQ-----PNLV----------- 525
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGS 561
TYN ++ + +M E + G +P+ I++ +I A
Sbjct: 526 --------TYNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 562 GNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A Q++ ++ PD++ YT+ I +++A + ++ + I PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 621 YITLLR 626
+ L+R
Sbjct: 633 WNALVR 638
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 154/390 (39%), Gaps = 60/390 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ II+ + G+ + A++ + + NI+ F L+ L L++
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M + G ++ +YN L+ C G+ A ++ ++ G L +V TYS ++
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV---CDQMQRSGCLP-NVTTYSILID 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA + A + M+S G PN +T++ +++ + +QA L E+M GC P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N ++ + + A +L E G+
Sbjct: 453 NTITFNTFIKGLCGNGRVEWAMKLL-------------ERMQGH---------------- 483
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
P TTYN L+ A Y L E+ L PN +
Sbjct: 484 ------------------GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE- 608
++ ++ +G + ALQ+ G +PD + Y T I + ++K A L E
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Query: 609 --MKHYQIQPNLVTYITLLRARSRYGSLHE 636
MK + P+++TY +L+ + ++ E
Sbjct: 586 SSMKEW--HPDIITYTSLIWGACNWMNIEE 613
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 56/283 (19%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K V Y+ ++ +QM + +M G+ PN T++ L+ A V+ A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM GC P++ ++ + +A + D A L
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------------------------ 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
RF KP+ YN L+ C + R++ L+
Sbjct: 237 --------------------------AGRF--KPSVPVYNALIDGMCKE-GRIEVAIKLL 267
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G+ PN +S++ +I++ SGNVE A + M G ++ +T IK C
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+L +A L++ M +PN+V Y TL+ GSL E Q
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 116/318 (36%), Gaps = 88/318 (27%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +++ M + + M G+ + +IN G EQA+ +F +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+P + N LL A + +F L+ +NM
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLY-----------------------TNM-- 170
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRT 541
K+ P TYNIL+KA C + RV A L EM
Sbjct: 171 ----------------------KKDGLIPNVFTYNILLKALCKN-DRVDAAHKLFVEMSN 207
Query: 542 VGLSPNHISWTI------------------------------LIDACGGSGNVEGALQIL 571
G P+ +++T LID G +E A+++L
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLL 267
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++G+ P+VV+Y+ I S ++ AF+LF +M N+ T+ L++
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 632 GSLHEVQQCLAVYQDMWK 649
G L+E D+WK
Sbjct: 328 GKLYEA-------LDLWK 338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F F++ + A++ + + H PN+ ++D Y ++ ++++
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++N+ N+ +N+++ A + L+++ G D +YN ++ A C G
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPN 397
+A ++ V ++ D+ TY+++ ++ W + A+ + ++ G+ PN
Sbjct: 575 VKIAAQLVERVSSMKE---WHPDIITYTSL--IWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAG 428
TW++L+ ++ +H+ +++L+ G
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 502 YSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S+ +F+ T +TY +++ + C D V+ ++ +M+ G++ + +I+
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDM--VQYILQQMKMDGINCCEDLFICIING 118
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ E AL++ + E G P V Y + + + + L+ MK + PN
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178
Query: 618 LVTYITLLRA 627
+ TY LL+A
Sbjct: 179 VFTYNILLKA 188
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 47/419 (11%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+V+ Y I
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + +A S F +M+ + PN+ Y L+ + G L+E Q ++ +M G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ---LFNEMVHKG 568
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 177/432 (40%), Gaps = 58/432 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K+ + A++ + + + N + +ID G + + ++
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ + N
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN I
Sbjct: 414 SEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++AC +G V +A+ + +++L +G +PN L+ +A D A
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI------ 523
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SH++ + P Y
Sbjct: 524 ----------------------------------------SHFNKM-RDLGLDPNVQAYT 542
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + +A L NEM G+S + + +T L+D GN+ A + M +
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ D+ YT I + +A +F EM + I P+ Y L+ S+Y L +
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI---SKYQKLGNL 659
Query: 638 QQCLAVYQDMWK 649
++ +++ +M +
Sbjct: 660 EEAISLQDEMER 671
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 39/295 (13%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ V AD A++ + V PNT T + ++ A LFE++
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA- 185
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRI 479
PN NI++ + + A LF ++ + G G D +
Sbjct: 186 ---PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ + ++S K TYN L+ C + R++
Sbjct: 243 EQLVEEMRRS--------------------GCKADVVTYNALINCFCK-FGRMETAYGYF 281
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
M+ G+ N ++++ +DA G V A+++ MR GM+ + YT I ++
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL A L +EM + N+VTY L+ + + E + L + M KAG
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM---MEKAG 393
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV+ +Y +++ C AG A E+ E+ GV VF Y+ I+ A
Sbjct: 49 GVVYGETTYKLVVDGLCGAGMANQALELVRELS-----GVYTPTVFIYNGIITGLCRASR 103
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A KV E M+ + PN T++ L+N + + A +F+EM + GC+PN
Sbjct: 104 VMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGT 163
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH-----KDKQSI 490
L+Q A + D A R+ RS L T V G + S ++ ++ + +
Sbjct: 164 LIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 491 TNTPNFVPNS-------HYSSFDKRFSF----------KPTTTTYNILMKACCTDYY--R 531
PN V S + D+ F Y + A C Y R
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDR 282
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + E+R G+ P+ +++++LI+ +G + +L++L+ MR +G+ PDVV Y+T I
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V + ++ + AF L E M+ PN+VTY +++ + G + EV + VY+ M K+
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR---VYEMMLKS 398
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 265 VCGICGDYMKSRAIYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---G 319
V G+CG M ++A+ E +R S T ++++N ++ + ++ YK ++K+
Sbjct: 61 VDGLCGAGMANQAL-ELVRELSGVYTPTVFIYNGIITGLCRASR-VMDAYKVLEKMVEES 118
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ ++ +Y ILL C + T LA+E++ E+K + K + TY T+++ + A
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMK----RNGCKPNPITYGTLIQHLSRAGEI 174
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL+V + S + + IT ++++ A ++ A+ EEM Q G PN + L
Sbjct: 175 DEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITN----- 492
+ + + DR R F K Y G D + + D+ +S+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 493 -TPNFVPNS-------HYSSFD---------KRFSFKPTTTTYNILMKACCT-----DYY 530
P+ V S FD +R KP TY+ L+ C D +
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ M G PN +++ ++D SG ++ ++ ++M + SPDVV Y+ +
Sbjct: 355 R---LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIM 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ L A LFE +K + P+ Y ++ + R G L E
Sbjct: 412 NGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEE 457
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 171/397 (43%), Gaps = 54/397 (13%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P ++I II G+C M + + E + +++ N++ + L+N ++ K
Sbjct: 85 TPTVFIYNGII--TGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLA 142
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV++ M++ G + +Y L++ AG A + E + LE L DV T +T
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE----LPTDVITCTT 198
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE----- 423
IV A ALK E+M GV PN +T+S+L++ G +++ + FEE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 424 --MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALG 469
L+A P L A +A DRA + ++++ A
Sbjct: 259 GGSLEAAAYPG------YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF---------KPTTTTY 518
+D + + + +M + T + + N F F P TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 519 NILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
N +M C + +RV +M + R SP+ ++++I+++ +G ++ A+++ ++
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRC---SPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ PD AY+ I R+ +L++A ++ M+
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSP-NMYICRTIIDVCGICGDYMKSRAI-- 278
I + ++ + ++ ALR ++ L P ++ C TI+ G+C A+
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVM-IEQRSLELPTDVITCTTIVG--GLCKASRLDDALKF 215
Query: 279 YEDLRSQNVTLNIYVFNSLMN-VNAH-DLKFTLEVYKNMQ-KLGVMADMASYNILLKACC 335
E++R V N +++L++ H +L + ++ + + G + A+Y L A C
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A++ V+ L GV+ DV TYS ++ FA A + +L++ EDM GV
Sbjct: 276 KAGYLDRARK---SVEELRQSGVVP-DVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+S+LIN + A L E M AG PN N ++ ++ + D R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391
Query: 456 F 456
+
Sbjct: 392 Y 392
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASK-KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
++ + N V F + +L +R ++ K + S +D G ++R
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+LR V ++ ++ L+N A +F +LE+ ++M++ GV D+ +Y+ L+ C
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
Q+ + ++ +EA G +V TY++++ + +V E ML + +P+
Sbjct: 348 RKF---QDAFRLLELMEAAGSPP-NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+S ++N + AG+++ A+ LFE + + P++ ++++ + A + + A ++
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463
Query: 458 SWTLS 462
++
Sbjct: 464 GMEVT 468
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 59/419 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + + ++ A R DA + P+ Y ++I G+C G ++ +++
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDK 322
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N +N+L++ N DL+ M K G+M +++YN+L+ A + G
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +
Sbjct: 383 MGEADDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D++S+ P T+N
Sbjct: 499 --------------------------DRKSVP---------------------PDEVTFN 511
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + L++EM+ G+ P+HIS+ LI G G+++ A ++ M
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P ++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 41/409 (10%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + I + + N L+++ + +N ++ + L Y M +L + + + ++N
Sbjct: 179 CFYMMKEKGIVPKIETCNDMLSLF-----LKLNRMEMAWVL--YAEMFRLRISSTVYTFN 231
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A+E G +E G K +V +Y+TI+ ++ + A ++ +
Sbjct: 232 IMVNVLCKEGKLKKAREFIG---FMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDA 287
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P++ T+ SLI+ G +E+A LF++M++ G PN+ N L+
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYD------------GNTDR-ISNMEHKDKQSITNTPN 495
+RAF +R + K + Y+ G D I M K T N
Sbjct: 348 LERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406
Query: 496 FVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ N + + + +F +PT TY L+ +A L ++
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ I + ++D +GNVE A +LK M + PD V + T ++ R ++++A
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EMK I+P+ ++Y TL+ S YG +++ V +M G
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLI---SGYGRRGDIKDAFRVRDEMLSIG 572
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 180/427 (42%), Gaps = 55/427 (12%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ I+F VR + R A + + K+ P + C ++ + + +
Sbjct: 155 KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVL 214
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y ++ ++ +Y FN ++NV LK E M+ LG ++ SYN ++
Sbjct: 215 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 274
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
GN A+ I + + KG+ + D +TY +++ + A + + M+ G+ P
Sbjct: 275 RGNIEGARRI---LDAMRVKGI-EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++LI+ N G +E+A +EM++ G P+ N+L+ A LF
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA------------LF 378
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + D I M K P
Sbjct: 379 MEGRMGEAD-----------DMIKEMRKK------------------------GIIPDAI 403
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ C + + L NEM + G+ P H+++T LI ++ A + + +
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+SPDV+ + + + +++AF L +EM + P+ VT+ TL++ R R G +
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523
Query: 635 HEVQQCL 641
E + L
Sbjct: 524 EEARMLL 530
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY---CNKGDLERAFSYRDEMVKKGIMP 365
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 366 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 414
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A +A+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ V+ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 475 FNAM--VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A +V+++MLS G P +T+++LI
Sbjct: 533 MKR---RGI-KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPD 611
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 110/282 (39%), Gaps = 42/282 (14%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + D LS ++I + L+ C ++A F M + G P + CN +L
Sbjct: 145 LTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 201
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--- 499
F + R+ +W L L RIS S T N + N
Sbjct: 202 ------FLKLNRMEMAWVLYAEMFRL---------RIS--------STVYTFNIMVNVLC 238
Query: 500 --------SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ F + FKP +YN ++ + + + +++ MR G+ P+
Sbjct: 239 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI G +E A + M E G+ P+ V Y T I L++AFS +EM
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I P++ TY L+ A G + E + ++M K G
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMI---KEMRKKG 397
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A +K E +K M K G ++ YN+LL C +G A ++ E+K
Sbjct: 162 QAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP--- 218
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+T++ A+ + K+ E M +AG PN IT+S+LI+ G +E+A+ +
Sbjct: 219 -DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTD 477
F ML+AGC+PN L+ A + +A LF T + VA G
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 337
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
R +M+ +K Y +PT T+N L+ C R L
Sbjct: 338 R-GSMDEAEKL-------------YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM T GL+ + ++ ILI + ++ AL++ K MRE D V+ + + +
Sbjct: 384 VAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 443
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + QA+++FE + PN T+ L + + G + + Q+ +
Sbjct: 444 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 171/371 (46%), Gaps = 25/371 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R +N+ N++ ++S++ V + + +V + M G D+ ++N +++ + N
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E+Y +H+ G K D +Y ++ A +LK+ +M+ G TP+
Sbjct: 61 MEKAREVY---QHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQ 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+SSL+ A A A V+ A LF+EM++ G P+ L+ +A + A F+
Sbjct: 117 AYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
Q N + + H + ++ + + K S P TYN
Sbjct: 177 PKHGCQP--------NVPVYNVLLH----GLCSSGQLEQANTLFAEMKSHSCSPDVVTYN 224
Query: 520 ILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ A C RV+ L MR G PN I+++ LI +G +E AL++ M E
Sbjct: 225 TLLDAVC-KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 283
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P+ YTT I R++++ QA LFE+M I P+ V Y +L+ + GS+ E
Sbjct: 284 AGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 343
Query: 637 VQQCLAVYQDM 647
++ +Y++M
Sbjct: 344 AEK---LYREM 351
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 166/416 (39%), Gaps = 105/416 (25%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+S + E++ + +++ FN +M +++++ EVY++M + G D SY+IL+
Sbjct: 28 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 87
Query: 332 KACCLAGN-----TVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
G +L++ + G+ ++A YS++V+ A A+ A +
Sbjct: 88 HGLAKIGKLDESLKILSEMVMRGQTPSMQA----------YSSLVRALAKARRVDHASSL 137
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+ G P+ + + LI AG V+ A F++M + GC+PN N+LL
Sbjct: 138 FDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCS 197
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ Q ++A LF
Sbjct: 198 SGQLEQANTLFAEM---------------------------------------------- 211
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSG 562
K S P TYN L+ A C RV+ L MR G PN I+++ LI +G
Sbjct: 212 -KSHSCSPDVVTYNTLLDAVC-KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM------------- 609
+E AL++ M E G P+ YTT I R++++ QA LFE+M
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYN 329
Query: 610 ----------------KHYQ-------IQPNLVTYITLLRARSRYGSLHEVQQCLA 642
K Y+ +QP +VT+ TL+ + G L + +A
Sbjct: 330 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 385
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 15/291 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VFTYS+I+K + + KV E+M++AG P+ ++ ++ A + +E+A ++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M+++G +P++ +IL+ + + D + ++ S + + Q + Y ++
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL-SEMVMRGQTPSMQAYSSLVRALAK 127
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR-VKALMNEMR 540
D S + + H+ R F Y +++ C + +M
Sbjct: 128 ARRVDHAS-SLFDEMIRGGHHPD---RLMF------YELILGLCQAGKVKDASERFKQMP 177
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN + +L+ SG +E A + M+ SPDVV Y T + +++R++
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ LFE M+ PN++T+ TL+ R G E+++ L V+ M +AG
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG---ELEKALEVFGSMLEAG 285
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 113/230 (49%), Gaps = 17/230 (7%)
Query: 237 LVSALRAYDASK------KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
L A + DAS+ KH PN+ + ++ G+C G ++ ++ +++S + +
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLH--GLCSSGQLEQANTLFAEMKSHSCS 217
Query: 289 LNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ +N+L++ A ++ ++++ M+ G + ++ +++ L+ C G A E+
Sbjct: 218 PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+G + LEA K + +TY+T++ A+ A ++ E M A + P+ + ++SLI
Sbjct: 278 FGSM--LEAG--CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333
Query: 407 ACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G +++A L+ EM AG +P N L+ + + RA L
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
A+R A VP I F + + +L AL + + + PN Y T+I G+C
Sbjct: 245 AMRAAGYVPNV-ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS--GLC 301
Query: 270 --GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ-KLGVMADM 324
+++R ++E + + + +NSL+ + ++Y+ M G+ +
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++N L+ C G A E+ E + KG L D TY ++ + A AL+
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAE---MGTKG-LAADSCTYRILIAGLSRATKLDEALE 417
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V + M + ++ S + G ++QA +FE ++G PN + IL ++ +
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 477
Query: 445 EACQFDRAFRLF 456
+ + + A +L
Sbjct: 478 KLGRVEDAQKLM 489
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 56/417 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + ++++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
YT I+ ++ ++A F M P++ T+ +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 52/463 (11%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + +I +N+L++ A L E V++ M G++ D+ +Y+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV-- 289
Query: 334 CCLAGNTVLAQEIYGEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
E +G+++ LE A G D+ +Y+ +++ +A + + A+
Sbjct: 290 -----------ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +AG TPN T+S L+N +G + LF EM + +P++ NIL++
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNS 500
E F LF + + E Y+G H+D + I + VP+S
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDM-ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 501 H-YSSFDKRF-------------------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
Y+ + F P+ T++ L+ + +A+++
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G+ N ++ I+A G E A++ M + PD + V ++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + FEEMK I P+++ Y +L + +V + L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N + P+ TYN ++ AC D+ + L
Sbjct: 202 MKNEK---------------------------ISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAG 347
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 177/386 (45%), Gaps = 32/386 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R + + V N+Y +N L+ + V +M+ G ++ +YN L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+ + G ++ +G ++ + T++T+V A + A K+ ++M
Sbjct: 198 AAFCRAGEVDAAERLVGVMR----EGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+TP+ +++++L++ AG + +A+ +F EM Q G P+ L+ A A +R
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 452 AFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A L R L + DG F+ ++ + + R
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRN----------------GFLDDALLAMKEMR 357
Query: 509 -FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P+ YN+L+ C + L++EM G+ P+ ++++ ++ G+ +
Sbjct: 358 ECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTD 417
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ + M + G+ PD + Y++ I+ +RL A LFE+M +QP+ TY TL+
Sbjct: 418 SAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ VQ+ L+++ +M K G
Sbjct: 478 DGHCKEGN---VQKALSLHDEMIKKG 500
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 182/431 (42%), Gaps = 64/431 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T++ G+ + + +R V ++ FN+++N A ++ +
Sbjct: 187 APNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARK 246
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + G+ D SYN L+ C AG A ++ E+ KGV+ DV T+++++
Sbjct: 247 MFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ---KGVVP-DVVTFTSLI 302
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + A+ + M G+ N T+++LI+ G ++ A+ +EM + +
Sbjct: 303 HAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQ 362
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ C N+L+ + + D A L I ME K +
Sbjct: 363 PSVVCYNVLINGYCKLGRMDEAREL-----------------------IHEMEAKGMKPD 399
Query: 491 TNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMN 537
T + + + + D +F+ P TY+ L++ C + A L
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M +GL P+ ++T LID GNV+ AL + M + G+ PDVV Y+ I +S
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTY---------------ITLLRARSRYGSLHEVQQCLA 642
R K+A L ++ + P+ + Y + LL+ S G +++ +
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK--- 576
Query: 643 VYQDM----WK 649
VYQ M WK
Sbjct: 577 VYQSMLDRHWK 587
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 26/285 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF- 421
+ Y+ ++ +DA A ++ ML GV PN T++ L+ A G E+A+ +
Sbjct: 120 LLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVG 178
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDR 478
++M AGC PN N L+ A A + D A RL R + + V +G +
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC-K 237
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKA 534
ME K FD+ R P +YN L+ C + A
Sbjct: 238 AGRMEDARKM----------------FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM G+ P+ +++T LI A +GN+E A+ ++ MRE G+ + +T I
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
R+ L A +EM+ +IQP++V Y L+ + G + E ++
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 49/382 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N + F +L++ + L L
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M++ + + YN+L+ C G A+E+ + +EAKG +K DV TYSTI+
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL---IHEMEAKG-MKPDVVTYSTILS 408
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ ML GV P+ IT+SSLI + A LFE+MLQ G +P
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + +A L + + I D + +
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSL-------------------HDEMIKKGVLPDVVTYS 509
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
+ + S + +R FK P Y LM C T ++ +K
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKG 569
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LMN+ V S W ++LI GN+ AL K + G SP+ +
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ +A ++ +E+
Sbjct: 630 SLVRGLFEEGMTVEADNVIQEL 651
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP A I + + +R ++R L A ++ + P+ + T+ID G C G+
Sbjct: 431 VVPDA-ITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID--GHCKEGNVQ 487
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTL----EVYKNMQKLGVM 321
K+ ++++++ + V ++ ++ L++ A L F L V N++ +M
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Query: 322 -----ADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFA 374
A+ S LLK + G A ++Y + +H KLD YS ++
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW------KLDGSVYSVLIHGHC 601
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AL + +L G +PN+ + SL+ G+ +A ++ +E+L
Sbjct: 602 RGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL--------N 653
Query: 435 CCNI 438
CC++
Sbjct: 654 CCSL 657
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 59/419 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + + ++ A R DA + P+ Y ++I G+C G ++ +++
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDK 344
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N +N+L++ N DL+ M K G+M +++YN+L+ A + G
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K + KG++ D TY+ ++ ++ + A + +MLS G+ P +
Sbjct: 405 MGEADDM---IKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI + +++A LFE++L G P+ N ++ +RAF L +
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D++S+ P T+N
Sbjct: 521 --------------------------DRKSVP---------------------PDEVTFN 533
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + L++EM+ G+ P+HIS+ LI G G+++ A ++ M
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G +P ++ Y IK +++ A L +EM + I P+ TY++L+ +L E
Sbjct: 594 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 41/409 (10%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + I + + N L+++ + +N ++ + L Y M +L + + + ++N
Sbjct: 201 CFYMMKEKGIVPKIETCNDMLSLF-----LKLNRMEMAWVL--YAEMFRLRISSTVYTFN 253
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A+E G +E G K +V +Y+TI+ ++ + A ++ +
Sbjct: 254 IMVNVLCKEGKLKKAREFIG---FMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDA 309
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P++ T+ SLI+ G +E+A LF++M++ G PN+ N L+
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYD------------GNTDR-ISNMEHKDKQSITNTPN 495
+RAF +R + K + Y+ G D I M K T N
Sbjct: 370 LERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428
Query: 496 FVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ N + + + +F +PT TY L+ +A L ++
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ I + ++D +GNVE A +LK M + PD V + T ++ R ++++A
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EMK I+P+ ++Y TL+ S YG +++ V +M G
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLI---SGYGRRGDIKDAFRVRDEMLSIG 594
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 180/427 (42%), Gaps = 55/427 (12%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ I+F VR + R A + + K+ P + C ++ + + +
Sbjct: 177 KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVL 236
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y ++ ++ +Y FN ++NV LK E M+ LG ++ SYN ++
Sbjct: 237 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 296
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
GN A+ I + + KG+ + D +TY +++ + A + + M+ G+ P
Sbjct: 297 RGNIEGARRI---LDAMRVKGI-EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++LI+ N G +E+A +EM++ G P+ N+L+ A LF
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA------------LF 400
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + D I M K P
Sbjct: 401 MEGRMGEAD-----------DMIKEMRKK------------------------GIIPDAI 425
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ C + + L NEM + G+ P H+++T LI ++ A + + +
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+SPDV+ + + + +++AF L +EM + P+ VT+ TL++ R R G +
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545
Query: 635 HEVQQCL 641
E + L
Sbjct: 546 EEARMLL 552
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
+EGR++ G+ K+ E+G+ P L DG K + +R + + G+M
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY---CNKGDLERAFSYRDEMVKKGIMP 387
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA---DILFCNFVREFGKKRD 236
+ + L V L E R+ + D+ +R I+P A +IL + R
Sbjct: 388 SVSTYNLLVHALFMEGRMGE----ADDMIKEMRKKGIIPDAITYNILINGYSR------- 436
Query: 237 LVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+A +A+D + LS P ++I V ++ ++E + Q V+ ++ +
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 294 FNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN++ V+ H +++ + K M + V D ++N L++ C G A+ + E
Sbjct: 497 FNAM--VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +G+ K D +Y+T++ + + A +V+++MLS G P +T+++LI
Sbjct: 555 MKR---RGI-KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610
Query: 410 NAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G P+
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPD 633
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 110/282 (39%), Gaps = 42/282 (14%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + D LS ++I + L+ C ++A F M + G P + CN +L
Sbjct: 167 LTLSRDRLS---VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 223
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--- 499
F + R+ +W L L RIS S T N + N
Sbjct: 224 ------FLKLNRMEMAWVLYAEMFRL---------RIS--------STVYTFNIMVNVLC 260
Query: 500 --------SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ F + FKP +YN ++ + + + +++ MR G+ P+
Sbjct: 261 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI G +E A + M E G+ P+ V Y T I L++AFS +EM
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I P++ TY L+ A G + E + ++M K G
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMI---KEMRKKG 419
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMSPDVVAY-----------------------------------TTAIKVCVRSKRLKQA 602
G+ P Y + I +R+ +A
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + M+ ++P+++TY TL++A R + + + +Y++M +G
Sbjct: 599 FSVLQFMRENGLRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 644
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P +I++ G + A+ +++ Q + NI + +L++V ++ ++
Sbjct: 472 PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G+ Y+ L+ A G LA VK ++A G L++ + ++++
Sbjct: 532 IEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMKADG-LEVSILVLNSLIN 587
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + A V + M G+ P+ IT+++L+ A ++ ++EEM+ +GC P
Sbjct: 588 AFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
Query: 432 NSQCCNIL 439
+ + +L
Sbjct: 648 DRKARAML 655
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMSPDVVAY-----------------------------------TTAIKVCVRSKRLKQA 602
G+ P Y + I +R+ +A
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + M+ ++P+++TY TL++A R + + + +Y++M +G
Sbjct: 599 FSVLQFMRENGLRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 644
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P +I++ G + A+ +++ Q + NI + +L++V ++ ++
Sbjct: 472 PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G+ Y+ L+ A G LA VK ++A G L++ + ++++
Sbjct: 532 IEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMKADG-LEVSILVLNSLIN 587
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + A V + M G+ P+ IT+++L+ A ++ ++EEM+ +GC P
Sbjct: 588 AFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
Query: 432 NSQCCNIL 439
+ + +L
Sbjct: 648 DRKARAML 655
>gi|299469706|emb|CBN76560.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 915
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 170/379 (44%), Gaps = 43/379 (11%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAH 303
++ SPN + I C D + + D+R V N V N+ ++ +A
Sbjct: 354 RREGPSPNSQCYASAITACARAHDPRSAMRLLADMREDGVPPNDVVLNAAVDACGKGDAP 413
Query: 304 DLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D L++ + M+K GV + ++N + AG A+ + E+ +G LK D
Sbjct: 414 D--EALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAREAKALLNEMSE---RG-LKPD 467
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
F+++ ++ FA A + + ++M S G+ + +++ + ++ACA AG V+ A+ L +
Sbjct: 468 NFSFNAAMQGFAAAGDPRNTASLSDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALKLLK 527
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM +AG EPN+ N L AC A + A +L R + +T V
Sbjct: 528 EMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRK--MGETGVV--------------- 570
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKAC--CTDYYR 531
+D S T V S DK + P TYN M AC + +
Sbjct: 571 --RDATSYTGA--IVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGNDRQ 626
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ L+NEMR G++PN IS++ + A G +G + L +L+ M +G+ D V Y A+
Sbjct: 627 AEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLPDVLSLLEEMHREGVEADEVTYHIAVD 686
Query: 592 VCVRSKRLKQAFSLFEEMK 610
++ L A LF EM+
Sbjct: 687 AASIARDLGCAMDLFREMR 705
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 163/431 (37%), Gaps = 72/431 (16%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+ ++E K RD L A + K N +C I G G + ++ + + +
Sbjct: 191 MLAARIKELAKARDFEGMLEALEEGPK-----NAIVCTVAITCLGQAGKWREAVEVLDGM 245
Query: 283 -RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + F +NA + + ++ + ++ +M + + C G+ +
Sbjct: 246 GKGGDGSDRPDAFAYAATINACG-----KAGRPVEAVALLTEMPTRRVKPDVVCF-GSAI 299
Query: 342 LAQEIYGEVKHLE------AKGVLKLDVFTYSTIVKVFADAK---WWQMALKVKEDMLSA 392
A GEV + KG + I AD K + AL++ ++M
Sbjct: 300 FA---LGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRRE 356
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +PN+ ++S I ACA A AM L +M + G PN N + AC + D A
Sbjct: 357 GPSPNSQCYASAITACARAHDPRSAMRLLADMREDGVPPNDVVLNAAVDACGKGDAPDEA 416
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+L R +K + K
Sbjct: 417 LKLLR----------------------------------------------GMEKAYGVK 430
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T T+N + KAL+NEM GL P++ S+ + +G+ +
Sbjct: 431 PNTVTFNSAISGLSRAGRAREAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASL 490
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G+ DVV+Y TA+ C ++ +K A L +EM+ ++PN V Y + L A R
Sbjct: 491 SDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGR 550
Query: 631 YGSLHEVQQCL 641
G ++ L
Sbjct: 551 AGKPKVAEKLL 561
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 180/476 (37%), Gaps = 87/476 (18%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ GK R+ V L P+ + I+ CG G +++ A+ ++ ++ V
Sbjct: 231 QAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKP 290
Query: 290 NIYVFNSLM---------------------------------------NVNAHDLKFTLE 310
++ F S + AH+ LE
Sbjct: 291 DVVCFGSAIFALGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEK--ALE 348
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + M++ G + Y + AC A + A + +++ GV DV + V
Sbjct: 349 LIQEMRREGPSPNSQCYASAITACARAHDPRSAMRLLADMRE---DGVPPNDVV-LNAAV 404
Query: 371 KVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ALK+ M A GV PNT+T++S I+ + AG +A L EM + G
Sbjct: 405 DACGKGDAPDEALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAREAKALLNEMSERGL 464
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTD 477
+P++ N +Q A L S+ + + A D G
Sbjct: 465 KPDNFSFNAAMQGFAAAGDPRNTASLSDEMKSRGIGMDVVSYGTAVSACAKAGDVKGALK 524
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKAL 535
+ M+ +P T YN + AC + L
Sbjct: 525 LLKEMQEA------------------------GVEPNTVVYNSALDACGRAGKPKVAEKL 560
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M G+ + S+T I AC +G+ + AL+ L+ M ++G++P+ + Y A+ C R
Sbjct: 561 LRKMGETGVVRDATSYTGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGR 620
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S +QA L EM+ + PN ++Y + A + G L +V L++ ++M + G
Sbjct: 621 SGNDRQAEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLPDV---LSLLEEMHREG 673
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V K D+ AL+ ++ PN + + +D CG G + +
Sbjct: 504 VSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRK 563
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V + + + + D LE + M K G+ + +YN + AC +GN
Sbjct: 564 MGETGVVRDATSYTGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGN 623
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + E++ +GV + +YS + A L + E+M GV + +
Sbjct: 624 DRQAEWLLNEMR---GQGVTP-NRISYSAAMFALGKAGRLPDVLSLLEEMHREGVEADEV 679
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+ ++A + A + AM LF EM G
Sbjct: 680 TYHIAVDAASIARDLGCAMDLFREMRARG 708
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 176/402 (43%), Gaps = 47/402 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ +I I G + ++ + +++ + ++ N+ +N+L+N + KF E+
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M G++ + +YN ++ C A++++ +L A DVFT++T++
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTLID 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ CN LL + + A +F++ SK + ++G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I + + YITL+ + G+ + L ++Q+M +G
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGN---INGALDIFQEMISSG 644
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 69/397 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K RD S + L S + Y + + D + D ++SR + ++
Sbjct: 34 KSRDGESGEAGFRGESLKLRSGS-YEIKGLEDAIDLFSDMLRSRPLP----------SVI 82
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN LM V + +Y+ M++ + D+ S+ IL+K C A +G++
Sbjct: 83 DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L L DV T++T++ AL D+ P+ +T+++L+N
Sbjct: 143 TKLG----LHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQICRPDVLTFTTLMNGLCR 194
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ L + M++ G +P+ + + A L R
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR------------- 241
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
++ + H KP Y+ ++ C D
Sbjct: 242 -------KMEEISH--------------------------IKPNVVIYSAIIDGLCKDGR 268
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L EM+ G+ PN +++ +I SG A ++L+ M E +SP+VV Y
Sbjct: 269 HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNA 328
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I V+ + +A L++EM I PN +TY +++
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 365
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 132/350 (37%), Gaps = 61/350 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ ++++ +M + + + +N L+ A L +Y + +E K + + D++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY---QKMERKQI-RCDIY 117
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ ++K F AL + G+ P+ +T+++L++ V +A+ LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
C P+ L+ R R+ + L V G
Sbjct: 178 ----CRPDVLTFTTLMNGLC------REGRVVEAVALLDRMVENG--------------- 212
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+P TY + C D L+ +M +
Sbjct: 213 --------------------------LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 543 G-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ PN + ++ +ID G + + M++ G+ P++V Y I S R
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L +EM +I PN+VTY L+ A + G E + +Y +M G
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE---LYDEMLPRG 353
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 177/404 (43%), Gaps = 51/404 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ +ID G C G + +++ + +++ + + N+ +++L+N + KF
Sbjct: 282 PDLFTYNCMID--GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +YN ++ C A+ ++ ++ A DVFT++T+
Sbjct: 340 ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF----YVMATKGCSPDVFTFNTL 395
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK ++ +M G+ +T T+++LI+ G + A+ L ++M+ +G
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ CN LL + + A +F++ SK + ++G
Sbjct: 456 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNG--------------- 500
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ PN
Sbjct: 501 ---------------------VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +I+ ++ A Q+ M SPDVV + T + ++ R+ LF
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM I + +TYITL+ + G+ + L ++Q+M +G
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGN---INGALDIFQEMISSG 640
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 184/442 (41%), Gaps = 83/442 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + PN TI+D G+C GD + + +
Sbjct: 179 VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD--GMCKIGDTVSALNLL 236
Query: 280 EDLRS-QNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++ N+ +++++++ +AH+L Y MQ+ G+ D+ +YN +
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNL------YTEMQEKGIFPDLFTYNCM 290
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C +G AQ + E+ LE K + +V TYS ++ + + + A ++ ++ML
Sbjct: 291 IDGFCSSGRWSEAQRLLQEM--LERK--INPNVVTYSALINAYVKERKFFEAEELYDEML 346
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PNTIT++S+I+ ++ A H+F M GC P+ N L+ A + D
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRID 406
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L T+ L D
Sbjct: 407 DGTELLHEM----TETGLVAD--------------------------------------- 423
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TTTYN L+ C D L +M + G+ P+ ++ L+D +G ++ AL
Sbjct: 424 ----TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479
Query: 569 QILKIMRE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ K M++ +G+ PDV Y I + + +A L++EM H I PN
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
+TY +++ + L E Q
Sbjct: 540 TITYSSMINGLCKQSRLDEATQ 561
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 154/394 (39%), Gaps = 71/394 (18%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYV-------------FNSLMNV--NAHDLKFTLEV 311
G G+ +K R+ + +++ ++++ FN LM V + +
Sbjct: 40 GFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISL 99
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M++ + D+ S+NIL+K C A +G++ L + DV T+ST++
Sbjct: 100 YQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLG----FQPDVVTFSTLLH 155
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AL D+ PN +T+++L+N G V +A+ L + M++ G +P
Sbjct: 156 GLCVEDRVSEAL----DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQP 211
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N ++ + A L R ++ M H
Sbjct: 212 NQITYGTIVDGMCKIGDTVSALNLLR--------------------KMEEMSH------- 244
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
KP Y+ ++ D A L EM+ G+ P+
Sbjct: 245 -------------------IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLF 285
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +ID SG A ++L+ M E ++P+VV Y+ I V+ ++ +A L++EM
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
I PN +TY +++ + L + V
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYV 379
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 107/295 (36%), Gaps = 61/295 (20%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV++++ ++K F AL + G P+ +T+S+L++ V +A+ LF
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M C PN L+ R R+ + L V G
Sbjct: 171 HQM----CRPNVVTFTTLMNGLC------REGRVVEAVALLDRMVEDG------------ 208
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL-----M 536
+P TY ++ C V AL M
Sbjct: 209 -----------------------------LQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM + PN + ++ +ID G A + M+E G+ PD+ Y I S
Sbjct: 240 EEMSHI--KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R +A L +EM +I PN+VTY L+ A + E ++ +Y +M G
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEE---LYDEMLPRG 349
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
I+P I + + + F K+ L +A + SP+++ T+ID G CG
Sbjct: 350 IIPNT-ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID--GYCGAKRID 406
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ ++ + + +N+L++ DL L++ + M GV D+ + N LL
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 332 KACCLAGNTVLAQEIYGEVKH----LEA----KGVLKLDVFTYSTIVKVFADAKWWQMAL 383
C G A E++ ++ L+A GV + DV TY+ ++ + + A
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV-EPDVQTYNILISGLINEGKFLEAE 525
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ ++M G+ PNTIT+SS+IN +++A +F+ M P+ N L+
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585
Query: 444 VEACQFDRAFRLF 456
+A + D LF
Sbjct: 586 CKAGRVDDGLELF 598
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 46/242 (19%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD + + + + S V +I N+L++ + LK LE++K MQK
Sbjct: 433 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 492
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------- 352
GV D+ +YNIL+ G + A+E+Y E+ H
Sbjct: 493 DASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCK 552
Query: 353 ----------LEAKGV--LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ G DV T++T+V + A L++ +M G+ + IT
Sbjct: 553 QSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAIT 612
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +LI+ G + A+ +F+EM+ +G P++ +L + RA +
Sbjct: 613 YITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Query: 461 LS 462
+S
Sbjct: 673 MS 674
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 198/473 (41%), Gaps = 66/473 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K + +A +D +K+ + N I II C C + ++ A+
Sbjct: 381 VTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 439
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 440 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG 499
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 500 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 555
Query: 399 I-----------------------------------TWSSLINACANAGLVEQAMHLFEE 423
I T+ +IN A +G + +++ +F+
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC P N L+ VE Q ++A + TL+ +S E
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAG---------------VSANE 660
Query: 484 H---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
H K Q + + Y + + + TY L+KACC AL E
Sbjct: 661 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKE 720
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + N + ILID G+V A +++ M+++G+ PD+ YT+ I C ++
Sbjct: 721 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 780
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 781 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAVG 830
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 185/449 (41%), Gaps = 63/449 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
++ G GD ++R +E +R++ +T ++ SL++ A D++ L + M++ G
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375
Query: 320 VMADMASYNILLKACCLAGNT---------------VLAQEIYGE--------------- 349
+ + +Y++++ AGN L IYG+
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 435
Query: 350 --VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V+ +E +G+ + Y T++ + + L V + + G TP +T+ LIN
Sbjct: 436 ALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINL 494
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQ 465
G + +A+ + M + G + N + ++++ V+ + AF +F K
Sbjct: 495 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 554
Query: 466 VALGEDYDGNTDRISNMEH-----KDKQSITNTPN---FVP--NSHYSSFDKRFSFK--- 512
V L + + NM+ K+ Q + + P F+P N S D R S +
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFD 614
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
PT T+N L+ KA +++EM G+S N ++T ++ G
Sbjct: 615 MMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM I N Y
Sbjct: 675 DTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 734
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ +R G + E + Q M K G
Sbjct: 735 ILIDGWARRGDVWEAADLI---QQMKKEG 760
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 148/372 (39%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II+ GD +S +++
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN+L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 675
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L++D+FTY ++K + Q AL V ++M + + N+
Sbjct: 676 TGKAFEYF---TRLQNEG-LEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 731
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 732 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 784
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 785 ----------------TQTIEEME------------------------ALGVKPNIKTYT 804
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ VGL P+ + L+ + ++ G + I
Sbjct: 805 TLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 864
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 865 KEMVEAGLIVDM 876
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 23/261 (8%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++ G + +A FE M G P S+ L+ A + A
Sbjct: 308 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSC 367
Query: 456 FRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R +++L Y G + N E D H+ KR
Sbjct: 368 VRKMKEEGIEMSL-VTYSVIVGGFSKAGNAEAAD--------------HWFDEAKRIHKT 412
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ Y ++ A C + R +AL+ EM G+ + ++D + + L +
Sbjct: 413 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIV 472
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
K ++E G +P VV Y I + + ++ +A + MK ++ NL TY ++
Sbjct: 473 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING--- 529
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
+ L + AV++DM K G
Sbjct: 530 FVKLKDWANAFAVFEDMVKEG 550
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 176/402 (43%), Gaps = 47/402 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ +I I G + ++ + +++ + ++ N+ +N+L+N + KF E+
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M G++ + +YN ++ C A++++ +L A DVFT++T++
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTLID 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ CN LL + + A +F++ SK + ++G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I + + YITL+ + G+ + L ++Q+M +G
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGN---INGALDIFQEMISSG 644
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 69/397 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K RD S + L S + Y + + D + D ++SR + ++
Sbjct: 34 KSRDGESGEAGFRGESLKLRSGS-YEIKGLEDAIDLFSDMLRSRPLP----------SVI 82
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN LM V + +Y+ M++ + D+ S+ IL+K C A +G++
Sbjct: 83 DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L L DV T++T++ AL D+ P+ +T+++L+N
Sbjct: 143 TKLG----LHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQICRPDVLTFTTLMNGLCR 194
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ L + M++ G +P+ + + A L R
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR------------- 241
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
++ + H KP Y+ ++ C D
Sbjct: 242 -------KMEEISH--------------------------IKPNVVIYSAIIDGLCKDGR 268
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L EM+ G+ PN +++ +I SG A ++L+ M E +SP+VV Y
Sbjct: 269 HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNA 328
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I V+ + +A L++EM I PN +TY +++
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 365
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 132/350 (37%), Gaps = 61/350 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ ++++ +M + + + +N L+ A L +Y + +E K + + D++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY---QKMERKQI-RCDIY 117
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ ++K F AL + G+ P+ +T+++L++ V +A+ LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
C P+ L+ R R+ + L V G
Sbjct: 178 ----CRPDVLTFTTLMNGLC------REGRVVEAVALLDRMVENG--------------- 212
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+P TY + C D L+ +M +
Sbjct: 213 --------------------------LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 543 G-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ PN + ++ +ID G + + M++ G+ P++V Y I S R
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L +EM +I PN+VTY L+ A + G E + +Y +M G
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE---LYDEMLPRG 353
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 54/246 (21%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD + + + + S V +I N+L++ + LK LE++K MQK
Sbjct: 437 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 496
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS+++
Sbjct: 497 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH---RGIVP-DTITYSSMID 552
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--------------- 416
A ++ M S +PN +T+++LIN AG V+
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Query: 417 --------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
A+ +F+EM+ +G P++ +L + +RA +
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Query: 457 RSWTLS 462
+S
Sbjct: 673 EDLQMS 678
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV+ +Y +++ C AG A E+ E+ GV +F Y+ I+ A
Sbjct: 49 GVVYGETTYKLVVDGLCGAGMANQALELVRELS-----GVYTPTLFIYNGIITGLCRASR 103
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A KV E M+ + PN T++ L+N + + A +F+EM + GC+PN
Sbjct: 104 VMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGT 163
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH-----KDKQSI 490
L+Q A + D A R+ RS L T V G + S ++ ++ + +
Sbjct: 164 LIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 491 TNTPNFVPNS-------HYSSFDKRFSF----------KPTTTTYNILMKACCTDYY--R 531
PN V S + D+ F Y + A C Y R
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDR 282
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ + E+R G+ P+ +++++LI+ +G + +L++L+ MR +G+ PDVV Y+T I
Sbjct: 283 ARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLIN 342
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
V + ++ + AF L E M+ PN+VTY +++ + G + EV + VY+ M K+
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR---VYEMMLKS 398
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 43/406 (10%)
Query: 265 VCGICGDYMKSRAIYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---G 319
V G+CG M ++A+ E +R S T ++++N ++ + ++ YK ++K+
Sbjct: 61 VDGLCGAGMANQAL-ELVRELSGVYTPTLFIYNGIITGLCRASR-VMDAYKVLEKMVEES 118
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ ++ +Y ILL C + T LA+E++ E+K + K + TY T+++ + A
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMK----RNGCKPNPITYGTLIQHLSRAGEI 174
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL+V + S + + IT ++++ A ++ A+ EEM Q G PN + L
Sbjct: 175 DEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITN----- 492
+ + + DR R F K Y G D + + D+ +S+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 493 -TPNFVPNS-------HYSSFD---------KRFSFKPTTTTYNILMKACCT-----DYY 530
P+ V S FD +R KP TY+ L+ C D +
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L+ M G PN +++ ++D SG ++ ++ ++M + SPDVV Y+ +
Sbjct: 355 R---LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIM 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ L A LFE +K + P+ Y ++ + R G L E
Sbjct: 412 NGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEE 457
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 171/397 (43%), Gaps = 54/397 (13%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P ++I II G+C M + + E + +++ N++ + L+N ++ K
Sbjct: 85 TPTLFIYNGII--TGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLA 142
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV++ M++ G + +Y L++ AG A + E + LE L DV T +T
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE----LPTDVITCTT 198
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE----- 423
IV A ALK E+M GV PN +T+S+L++ G +++ + FEE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 424 --MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALG 469
L+A P L A +A DRA + ++++ A
Sbjct: 259 GGSLEAAAYPG------YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF---------KPTTTTY 518
+D + + + +M + T + + N F F P TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 519 NILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
N +M C + +RV +M + R SP+ ++++I+++ +G ++ A+++ ++
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRC---SPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ PD AY+ I R+ +L++A ++ M+
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSP-NMYICRTIIDVCGICGDYMKSRAI-- 278
I + ++ + ++ ALR ++ L P ++ C TI+ G+C A+
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVM-IEQRSLELPTDVITCTTIVG--GLCKASRLDDALKF 215
Query: 279 YEDLRSQNVTLNIYVFNSLMN-VNAH-DLKFTLEVYKNMQ-KLGVMADMASYNILLKACC 335
E++R V N +++L++ H +L + ++ + + G + A+Y L A C
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A++ V+ L GV+ DV TYS ++ FA A + +L++ EDM GV
Sbjct: 276 KAGYLDRARK---SVEELRQSGVVP-DVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+S+LIN + A L E M AG PN N ++ ++ + D R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391
Query: 456 F 456
+
Sbjct: 392 Y 392
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASK-KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
++ + N V F + +L +R ++ K + S +D G ++R
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+LR V ++ ++ L+N A +F +LE+ ++M++ GV D+ +Y+ L+ C
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
Q+ + ++ +EA G +V TY++++ + +V E ML + +P+
Sbjct: 348 RKF---QDAFRLLELMEAAGSPP-NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+S ++N + AG+++ A+ LFE + + P++ ++++ + A + + A ++
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYH 463
Query: 458 SWTLS 462
++
Sbjct: 464 GMEVT 468
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 291 IYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++N L++ + KF + +Y NM+K G++ ++ +YNILLKA C A +++
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 349 EVKH--------------------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
E+ + E G K V Y+ ++ ++A
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVA 263
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K+ +M+ GV PN +++S +IN+ +G VE A LF +M GC+ N L++
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
C + A L++ + VA G S E +PN
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 500 -SHYSSFDKRFS-------------------FKPTTTTYNILMKACCTD--YYRVKALMN 537
+ YS F+ +P TY ++ C + + + +L+
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G +PN +++ I G+G VE A+++L+ M+ G P++ Y + R
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ ++AF LF+E++ +QPNLVTY T+L SR G + E Q
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 174/426 (40%), Gaps = 83/426 (19%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
I C+ ++ F F + F LR DA N++ +I C + G
Sbjct: 286 INSLCVSGNVELAFALFAQMF---------LRGCDA--------NIHTFTPLIKGCFMRG 328
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++ + N+ +N+L++ + L+ L+V MQ+ G + ++ +Y+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ +G+ V A E + + + G + +V TY+ +V V + A + E
Sbjct: 389 ILIDGFAKSGDLVGASETW---NRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G TPNT+T+++ I G VE AM L E M GC PN N LL A +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++ AF LF+ +E ++ Q PN V
Sbjct: 505 YEEAFGLFQE-----------------------IEARNLQ-----PNLV----------- 525
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGS 561
TYN ++ + +M E + G +P+ I++ +I A
Sbjct: 526 --------TYNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 562 GNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A Q++ ++ PD++ YT+ I +++A + ++ + I PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 621 YITLLR 626
+ L+R
Sbjct: 633 WNALVR 638
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 154/390 (39%), Gaps = 60/390 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ II+ + G+ + A++ + + NI+ F L+ L L++
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M + G ++ +YN L+ C G+ A ++ ++ G L +V TYS ++
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV---CDQMQRSGCLP-NVTTYSILID 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA + A + M+S G PN +T++ +++ + +QA L E+M GC P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N ++ + + A +L E G+
Sbjct: 453 NTMTFNTFIKGLCGNGRVEWAMKLL-------------ERMQGH---------------- 483
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
P TTYN L+ A Y L E+ L PN +
Sbjct: 484 ------------------GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE- 608
++ ++ +G + ALQ+ G +PD + Y T I + ++K A L E
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Query: 609 --MKHYQIQPNLVTYITLLRARSRYGSLHE 636
MK + P+++TY +L+ + ++ E
Sbjct: 586 SSMKEW--HPDIITYTSLIWGACNWMNIEE 613
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 56/283 (19%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K V Y+ ++ +QM + +M G+ PN T++ L+ A V+ A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF EM GC P++ ++ + +A + D A L
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------------------------ 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
RF KP+ YN L+ C + R++ L+
Sbjct: 237 --------------------------AGRF--KPSVPVYNALIDGMCKE-GRIEVAIKLL 267
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G+ PN +S++ +I++ SGNVE A + M G ++ +T IK C
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+L +A L++ M +PN+V Y TL+ GSL E Q
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 116/318 (36%), Gaps = 88/318 (27%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +++ M + + M G+ + +IN G EQA+ +F +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+P + N LL A + +F L+ +NM
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLY-----------------------TNM-- 170
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRT 541
K+ P TYNIL+KA C + RV A L EM
Sbjct: 171 ----------------------KKDGLIPNVFTYNILLKALCKN-DRVDAAHKLFVEMSN 207
Query: 542 VGLSPNHISWTI------------------------------LIDACGGSGNVEGALQIL 571
G P+ +++T LID G +E A+++L
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLL 267
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++G+ P+VV+Y+ I S ++ AF+LF +M N+ T+ L++
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327
Query: 632 GSLHEVQQCLAVYQDMWK 649
G L+E D+WK
Sbjct: 328 GKLYEA-------LDLWK 338
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 502 YSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S+ +F+ T +TY +++ + C D V+ ++ +M+ G++ + +I+
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDM--VQYILQQMKMDGINCCEDLFICIING 118
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ E AL++ + E G P V Y + + + + L+ MK + PN
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178
Query: 618 LVTYITLLRA 627
+ TY LL+A
Sbjct: 179 VFTYNILLKA 188
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 190/469 (40%), Gaps = 94/469 (20%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I GI G ++ A++ E
Sbjct: 235 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEF 294
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK V M + GV D A+Y++L+ A AG
Sbjct: 295 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGR 354
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 355 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRH 410
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM +F M G EP+ N L+ A + + D A LF+
Sbjct: 411 FYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEM 470
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
S N P P TTTYN
Sbjct: 471 RES-----------------------------NCP------------------PGTTTYN 483
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN-------------- 563
I++ + V+ +M+EM+ GL PN I++T L+D G SG
Sbjct: 484 IMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 543
Query: 564 ---------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ AL ++K MR DG+ V + I +R+ +A
Sbjct: 544 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEA 603
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FS+ + MK +P+++TY TL++A R + + + +Y++M +G
Sbjct: 604 FSVLQFMKENDFRPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 649
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P +I++ G ++ + +++ Q + NI + +L++V ++ ++
Sbjct: 477 PGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 536
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G+ Y+ L+ A G LA VK + A G L+ ++++
Sbjct: 537 IEAMKADGLKPSPTMYHALVNAYAQRG---LADHALNVVKAMRADG-LEASTVVLNSLIN 592
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + + A V + M P+ IT+++L+ A ++ ++EEM+ +GC P
Sbjct: 593 AFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 652
Query: 432 NSQCCNILLQA 442
+ + +L A
Sbjct: 653 DRKARAMLRSA 663
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 183/419 (43%), Gaps = 37/419 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ Y P++ ++ G D + +++ S + NIY F +
Sbjct: 211 ALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIR 270
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ A + + K M G D+ +Y +L+ A C AG A+E++ ++K K
Sbjct: 271 ILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKP 330
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
D TY T++ F+D + +M + G P+ +T++ LI+A G V++A
Sbjct: 331 ----DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEA 386
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------TLSKTQVALGED 471
+ M + G PN N L+ + + D A LF S T + T + L D
Sbjct: 387 FGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYI-LFID 445
Query: 472 YDGNTDRISNMEHKDKQSITN--TPNFVP-NSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
Y G + ++ TN PN V N+ S ++ +
Sbjct: 446 YYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLE---------------- 489
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
K N ++ GL+P+ I++ IL+ G +G V+ A+++L M E+G P+VV +
Sbjct: 490 --EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++ R+ +A+ +F+ MK ++ P +VTY TLL + G VQ+ A+++ M
Sbjct: 548 LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEG---RVQEATALFKGM 603
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ A+ +MA + M +AG TP+ T++ ++A +G +++ L+EEML
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
GC+PN+ NI++ V++ D+A L+ S S T G DG ++ +
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL-KLGRL 909
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCT--DYYRVKALMNE 538
E + F++ + P YNILM D L
Sbjct: 910 EEAKQ----------------FFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRR 953
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ S++I++D G V+ AL + ++ G+ PD+V Y I RS+R
Sbjct: 954 MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A SLF+EM++ I P+L TY L+ G + E + +Y+++ G
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK---MYEELQLKG 1063
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 236/573 (41%), Gaps = 78/573 (13%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L K G E A+ V +VSEG + +L MVA G + I+ V+
Sbjct: 195 YIGLIHLLLKSGFCRE-ALKVYRRMVSEGIKPSLKTYSAL-MVALG-----KRRDIETVM 247
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD-SGEVEMFVGLMEVLEEFRLPVKELD 192
G+L+++ LG+ P + F + C R+L +G+++ G+++ +++ +
Sbjct: 248 GLLQEMESLGLRP----NIYTFTI----CIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299
Query: 193 EEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
I LC N ++ L ++ + P + + + +F DL + +
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSHKPDR-VTYITLLDKFSDHGDLDAIKEFWSEM 358
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ P++ +ID G ++ + ++ Q V N++ +N+L+ + + L
Sbjct: 359 EADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRL 418
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
LE++ +M+ LG+ +Y + + +G + A + + ++K G++ ++
Sbjct: 419 DEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK---TNGIVP-NIVA 474
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ + A+ + A + + G+ P+ IT++ L+ AG V+ A+ L EM
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ GC+P N L+ +A + D A+++F+
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM-------------------------- 568
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
K PT TYN L+ + AL M
Sbjct: 569 ---------------------KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN IS+ L+D +G V+ AL++L M E PDV+ Y T I ++ R+ AF
Sbjct: 608 CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF 667
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
LF +MK I P+ VT TLL + G + +
Sbjct: 668 WLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIED 699
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 17/293 (5%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ ++Y ++ + + + + ALKV M+S G+ P+ T+S+L+ A +E M L
Sbjct: 190 LNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGL 249
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+EM G PN I ++ A + D A+ + + G D T I
Sbjct: 250 LQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM----DDAGCGPDVVTYTVLID 305
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
+ + K + N S S KP TY L+ D +K +E
Sbjct: 306 ALCNAGK--LNNAKELFLKMKAS------SHKPDRVTYITLLDKFSDHGDLDAIKEFWSE 357
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ +++TILIDA G V+ A L +M++ G++P++ Y T I +R R
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +A LF M+ ++ TYI + YG E + + ++ M G
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFI---DYYGKSGESGKAIKTFEKMKTNG 467
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 22/347 (6%)
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S +T ++ +NSL++ + A + ++ M+ G D+ +YN+ L A +G
Sbjct: 780 KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKI 839
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E++ + + +G K + T++ ++ + A+ + D++S +P T
Sbjct: 840 ---KELFDLYEEMLFRGC-KPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWT 895
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ LI+ G +E+A FEEML GC PN NIL+ + + A LFR
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ L + Y D + + D HY K P YN+
Sbjct: 956 KEGIRPDL-KSYSIMVDCLCMVGKVDDAL-----------HYFEELKLSGLDPDLVCYNL 1003
Query: 521 LMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ RV+ +L +EMR G++P+ ++ LI G +G VE A ++ + ++
Sbjct: 1004 MINGLGRSQ-RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
G+ P+V Y I+ S +A++++++M +PN T+ L
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP + +ID G +++ +E++ N ++N LMN D++ E
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G+ D+ SY+I++ C+ G A + E+K L D+ Y+ ++
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL----SGLDPDLVCYNLMI 1005
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ + AL + ++M + G+TP+ T+++LI AG+VE+A ++EE+ G E
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
PN N L++ + DRA+ +++
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYK 1092
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/508 (19%), Positives = 190/508 (37%), Gaps = 89/508 (17%)
Query: 216 IVPRADILFCNF-VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
IVP +I+ CN + ++ L A ++ KK +P+ ++ G G
Sbjct: 468 IVP--NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDD 525
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ + ++ + + NSL++ A + ++++ M+++ + + +YN LL
Sbjct: 526 AIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLA 585
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLD----VFTYSTIVKVFADAKWWQMALKVKED 388
G A ++ KG++ D +++T++ +ALK+
Sbjct: 586 GLGKEGRVQEATALF--------KGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFR 637
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M P+ +T++++I V A LF +M + P+ LL ++ +
Sbjct: 638 MTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGR 696
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------- 500
+ AFR+ + + A G ++ I +E + QSI + V N+
Sbjct: 697 IEDAFRVAKEFVHHVGDHADGSFWEDLMGGIL-IEAEIGQSILFAESLVCNTICEDDSVL 755
Query: 501 ---------HYSSFD---------KRFSFKPTTTTYNIL----MKACCTDYYRVKALMNE 538
H + D K F P+ YN L +KA T+ L +
Sbjct: 756 IPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTE--MAWGLFYK 813
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK- 597
M+ G +P+ ++ + +DA G SG ++ + + M G P+ + + I V+S
Sbjct: 814 MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873
Query: 598 ----------------------------------RLKQAFSLFEEMKHYQIQPNLVTYIT 623
RL++A FEEM Y PN Y
Sbjct: 874 LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNI 933
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ +G +V+ +++ M K G
Sbjct: 934 LMNG---FGKQGDVETACELFRRMVKEG 958
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +MR VG N S+ LI SG AL++ + M +G+ P + Y+ + +
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ ++ L +EM+ ++PN+ T+ +R R G + E L D
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD 290
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 20/381 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
GD + +R+++E ++ +T +I +N+L++ L ++ +++ M+ +G D+ +Y
Sbjct: 146 GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITY 205
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ + C + A E + E+K + LK +V +YST++ QMA+K
Sbjct: 206 NALINSFCKFKGMLRAFEFFREMKDKD----LKPNVISYSTLIDALCKEGMMQMAIKFFV 261
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T+SSLI+A AG + +A L +EMLQ + N LL E
Sbjct: 262 DMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG 321
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A LFR+ + K V + T I H +S+ +
Sbjct: 322 MMNEAEELFRA--MGKAGVT--PNLQAYTALIHG--HIKVRSMDKAMELFNEM------R 369
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP + ++ C++ K +M EM+ G+ N + +T L+DA +GN
Sbjct: 370 EKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +L+ MR+ G VV + I + +++A F M + +QPN+ Y L+
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489
Query: 626 RARSRYGSLHEVQQCLAVYQD 646
+ + + ++ QD
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQD 510
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 61/401 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P C + G+ SR + D+ + ++ +N ++ D+ +
Sbjct: 95 PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQE---IYGEVKHLEAKGVLKLDVFTYST 368
++ M+K+G+ D+ +YN L+ G L E ++ E+K + + DV TY+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDG---YGKIGLLDESVCLFEEMKFMGCEP----DVITYNA 207
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F K A + +M + PN I++S+LI+A G+++ A+ F +M + G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN + L+ A +A AF L D + EH D
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFML--------------------ADEMLQ-EHVDLN 306
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+T Y L+ C + +A L M G++P
Sbjct: 307 IVT--------------------------YTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI +++ A+++ MRE + PD++ + T + +L++ +
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
EMK I N V Y TL+ A + G+ E L +D+
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDL 441
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 150/345 (43%), Gaps = 58/345 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +++M G+ + +YNI++ C G+ + A+ ++ ++K + L D+ TY+T+
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMG----LTPDIVTYNTL 173
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAG 428
+ + ++ + E+M G P+ IT+++LIN+ C G++ +A F EM
Sbjct: 174 IDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML-RAFEFFREMKDKD 232
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN + L+ A + A + F T
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMT---------------------------- 264
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
R P TY+ L+ A C +A M +EM +
Sbjct: 265 -------------------RVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL 305
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T L+D G + A ++ + M + G++P++ AYT I ++ + + +A LF
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM+ I+P+++ + T++ S ++++C + +M ++G
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLC---SESKLEECKIIMTEMKESG 407
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 167/425 (39%), Gaps = 32/425 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K + ++ A + K PN+ T+ID +C + M AI +
Sbjct: 203 ITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLID--ALCKEGMMQMAIKFF 260
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
D+ + N + ++SL++ N A +L + M + V ++ +Y LL C
Sbjct: 261 VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEE 320
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E++ + K + ++ Y+ ++ + A+++ +M + P+
Sbjct: 321 GMMNEAEELFRAM----GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
+ W +++ + +E+ + EM ++G N L+ A +A A L
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436
Query: 457 --RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRFSFKP 513
R T V DG R V + +Y +P
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKR----------------GLVQEAIYYFGRMPDHDLQP 480
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y L+ C + K L +EM+ + P+ I++T +ID GN + AL +
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+ D+ AYT+ + + +++QA EM I P+ LLR
Sbjct: 541 NKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL 600
Query: 632 GSLHE 636
G++ E
Sbjct: 601 GNIDE 605
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 6/203 (2%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N I T++D G+ ++ + E++R + + F +L++ ++ + +
Sbjct: 411 NPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYF 470
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + ++A Y L+ C A++++ E ++ K ++ D Y+ ++
Sbjct: 471 GRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE---MQDKNMIP-DKIAYTAMIDG 526
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+Q AL ++ M+ G+ + ++SL+ + G V+QA EM+ G P+
Sbjct: 527 NLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586
Query: 433 SQCCNILLQACVEACQFDRAFRL 455
C LL+ E D A L
Sbjct: 587 ETLCTRLLRKHYELGNIDEAIEL 609
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 168/378 (44%), Gaps = 58/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
IYE++ S ++ ++ F +L++ DL E++ M+ G++ + Y IL++ C
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A+ ++ ++ + GV +V+TY+T++ + + AL++ +DML G+
Sbjct: 229 SDNKIEEAESMHRAMREV---GVYP-NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLV 284
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+ LI+ G ++ A +LF M++ PN N L+ A + A L
Sbjct: 285 PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMAL 344
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F +RF P
Sbjct: 345 FLEL-----------------------------------------------ERFEVSPDV 357
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+IL++ C+ +A + +M G+ N +++ LID C G ++ AL+I
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E+G+ P+V+ ++T I + + L+ A ++ EM + P++VTY ++ +YGS
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ E L +Y DM G
Sbjct: 478 MKEA---LKLYSDMLDNG 492
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 190/462 (41%), Gaps = 82/462 (17%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC- 269
+R IVP I++ +R + A + A ++ PN+Y T++D G C
Sbjct: 208 MRVKGIVPTV-IVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD--GYCK 264
Query: 270 -GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
+ ++ +Y+D+ + + ++ F L++ ++K ++ NM K V ++A
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN L+ A C G+ A ++ E++ E DVFTYS +++ + A +
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSP----DVFTYSILIRGLCSVSRTEEAGNIF 380
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E M G+ N++T++SLI+ C G +++A+ + +M + G EPN + L+ +
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
A ++ +
Sbjct: 441 RNLQAAMGIYSEMVIK-------------------------------------------- 456
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S P TY ++ C Y +K L ++M G++PN + + L+D G
Sbjct: 457 ---SLSPDVVTYTAMIDGHC-KYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512
Query: 564 VEGALQIL--KI--------MREDGMSPDV---VAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ AL++ KI + G P + VAYT I + + +A LF +M+
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL-AVYQDMWKAG 651
Y +QP+ V Y+ +LR L +V+ L ++ DM K G
Sbjct: 573 RYGLQPDEVIYVVMLRG------LFQVKYILMMLHADMLKFG 608
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 55/399 (13%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN 301
R Y+ + SP++ T+ID C GD ++++ +++++R + + + V+ L+
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGL 227
Query: 302 AHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
D K +++ M+++GV ++ +YN L+ C N A +Y + + +G++
Sbjct: 228 CSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY---QDMLGEGLV 284
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV T+ ++ + A + +M+ VTPN ++SLI+A G V +AM
Sbjct: 285 P-DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMA 343
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF E+ + P+ +IL++ + + A +F T
Sbjct: 344 LFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT------------------- 384
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
K+ I + TYN L+ CC + KAL +
Sbjct: 385 -------KEGIL---------------------ANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G+ PN I+++ LID N++ A+ I M +SPDVV YT I +
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+K+A L+ +M I PN T LL + G + +
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 149/340 (43%), Gaps = 31/340 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ + ++ID GD ++ A++ +L V+ +++ ++ L+ + +
Sbjct: 319 TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G++A+ +YN L+ CC G A EI + GV + +V T+ST++
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI---CSQMTENGV-EPNVITFSTLI 434
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + Q A+ + +M+ ++P+ +T++++I+ G +++A+ L+ +ML G
Sbjct: 435 DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGIT 494
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + LL + + A LF E + T R + K S+
Sbjct: 495 PNCYTISCLLDGLCKDGKISDALELFT------------EKIEFQTPRCNVDAGGSKPSL 542
Query: 491 TNTPNFVPNSHYSSFD-------------KRFSFKPTTTTYNILMKACCTDYYRVKALMN 537
TN + H D +R+ +P Y ++++ Y + L
Sbjct: 543 TNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHA 602
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M G+ PN IL + SG ++ A K + E+
Sbjct: 603 DMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 31/276 (11%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+VK Q+A + S+ TPN + LI LVE+A+ ++ + G
Sbjct: 88 LVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYH---KVG 142
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG---NTDRISNM 482
Q CN+LL V+ +F+ +R++ S LS + + G DG D +
Sbjct: 143 AALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQ 202
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E D+ + PT Y IL++ C+D +++ MR
Sbjct: 203 EMFDEMRVK------------------GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMR 244
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
VG+ PN ++ L+D N + AL++ + M +G+ PDVV + I + +K
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A +LF M + + PN+ Y +L+ A + G + E
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 25/213 (11%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I F + + K R+L +A+ Y SP++ +ID G C G ++ +Y
Sbjct: 428 ITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID--GHCKYGSMKEALKLY 485
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYK----------NMQKLG---VMADM 324
D+ +T N Y + L++ D K + LE++ N+ G + +
Sbjct: 486 SDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNH 545
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+Y L+ C G A +++ +++ L+ D Y +++ K+ M L
Sbjct: 546 VAYTALIHGLCQDGQFSKAVKLFSDMRRYG----LQPDEVIYVVMLRGLFQVKYILMMLH 601
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
DML GV PN+ L +G ++ A
Sbjct: 602 A--DMLKFGVIPNSAVHVILCECYQESGFLKSA 632
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 31/302 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ A A W+ A+ + +DML A + P+ T++++INAC AG ++A+
Sbjct: 187 KPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYF--------EMMKGANIAPDTFTL 298
Query: 480 SNMEH---KDKQ-----SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDY 529
+ + H KD Q + N S +KR P TY +M + C
Sbjct: 299 NIVIHCLVKDGQYGEAIELLN----------SMREKRTQCPPDVVTYTSIMHSYYVCGKV 348
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA+ + M G+ PN +S+ L+ A G AL I K+++++G+ PDVV+YTT
Sbjct: 349 EDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTL 408
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ RS + ++A F+EM+ +PN+V+Y L+ A YGS ++ +++ +M K
Sbjct: 409 LNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDA---YGSAGMFKEAISLLHEMEK 465
Query: 650 AG 651
G
Sbjct: 466 DG 467
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + N + G + AL ++ P++ ++ Y K+
Sbjct: 221 IPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAI 280
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM--QKLGVMADMASYNILLK 332
A +E ++ N+ + + N +++ D ++ +E+ +M ++ D+ +Y ++
Sbjct: 281 AYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMH 340
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ + G + ++ + A+GV K ++ +Y+ ++ +A AL + + +
Sbjct: 341 SYYVCGKVEDCKAVF---DMMVAEGV-KPNIVSYNALLGAYASRGMHADALGIFKLLKQN 396
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +++++L+NA +G E+A F+EM + C PN N L+ A A F A
Sbjct: 397 GLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEA 456
Query: 453 FRLFRSW----------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-- 500
L ++S A G +I + K NS
Sbjct: 457 ISLLHEMEKDGIPPDVVSISTLLTACGRCR--QITKIDTILEAAKSRGIKLNIVCYNSGI 514
Query: 501 ----HYSSFDKRFSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
++ + K P TYNIL+ C Y +M + +
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
++ LI + G + A M+E G PDV+ YT I+ + A+ L
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
F+EM+ +QP+ + +L+ A +R GS HE
Sbjct: 635 FKEMEGNTVQPDAIICSSLMEALNR-GSQHE 664
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 172/434 (39%), Gaps = 57/434 (13%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P ADI + + + + A+ D + P+ +I+ CG G++ K+
Sbjct: 188 PDADI-YNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + + V ++ N +++ N + ++ M+ + D + NI++
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLV 306
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ ++ E + DV TY++I+ + + V + M++ GV
Sbjct: 307 KDGQYGEAIELLNSMR--EKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVK 364
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +++++L+ A A+ G+ A+ +F+ + Q G P+ LL A + Q ++A
Sbjct: 365 PNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREA 424
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ ++ S +P
Sbjct: 425 FKEM-----------------------------------------------RKNSCRPNI 437
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+YN L+ A + + +L++EM G+ P+ +S + L+ ACG + IL+
Sbjct: 438 VSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEA 497
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ ++V Y + I + +A L+ M + P+ VTY L+ + G
Sbjct: 498 AKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGK 557
Query: 634 LHEVQQCLAVYQDM 647
E L ++DM
Sbjct: 558 YAE---SLKFFEDM 568
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 142/379 (37%), Gaps = 78/379 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K I E +S+ + LNI +NS + +N D LE+
Sbjct: 470 PDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALEL 529
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV---------------LAQEIYGEV------ 350
Y M V D +YNIL+ C G L +E+Y +
Sbjct: 530 YAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 589
Query: 351 --KHLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K EA+ DV TY+ +++ + D W+ A + ++M V P+ I
Sbjct: 590 QGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAII 649
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
SSL+ A E+ + L E M + N + ++ +C + R W
Sbjct: 650 CSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASC----------SMLRDW- 698
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
KT + E D + IS + + +F
Sbjct: 699 --KTASEIIEHLDSSLSSIS---------------------VGTLNHLLTFLGKCGKTEC 735
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+MK +Y+ +M+ TVG+S ++T+L+ G +++L+ M + G+S
Sbjct: 736 MMKL----FYK---MMSSCSTVGVS----TYTVLLRNLLAVGKWRKYIEVLQWMEDAGVS 784
Query: 581 PDVVAYTTAIKVCVRSKRL 599
P + Y + R +
Sbjct: 785 PTLYMYQNVLPYIWRDNSM 803
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 175/413 (42%), Gaps = 31/413 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL + K++ P++ T+++ G G K+R ++++R + NI +N+L++
Sbjct: 386 ALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALID 445
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+A K + + M+K G+ D+ S + LL AC G +I ++ +++G
Sbjct: 446 AYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTAC---GRCRQITKIDTILEAAKSRG 502
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ KL++ Y++ + + + + AL++ M+++ V P+ +T++ LI+ G ++
Sbjct: 503 I-KLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAES 561
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGED 471
+ FE+M+ + + L+ + V+ + A F S S T A+ E
Sbjct: 562 LKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEA 621
Query: 472 Y-DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
Y D + R + K+ + T P+ + S R S LMK C
Sbjct: 622 YNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLN 681
Query: 529 ---YYRVKA---LMNEMRTVGLSPNHISWTI----------LIDACGGSGNVEGALQILK 572
Y+ + A ++ + +T H+ ++ L+ G G E +++
Sbjct: 682 QKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFY 741
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M + V YT ++ + + ++ + + M+ + P L Y +L
Sbjct: 742 KMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 54/282 (19%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D +TY+ +V + AK ++ AL V M + PNT+T ++LI+A GL +QA+
Sbjct: 80 DQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAI 139
Query: 419 HLFEEM------LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+F +M L+ GCEPN N+L+ A + D ++ +
Sbjct: 140 QVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMR------------ 187
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
DGNTD+ S +P + TYN L+ AC Y
Sbjct: 188 DGNTDQ-------------------------------SVQPNSATYNTLINACGKGGLYE 216
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L++ M G+ P+HI++T LIDA G +G E A K M+ +S DV+AYT I
Sbjct: 217 KAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMI 276
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
R ++A +F+ M+H ++PN VTY++L+ A + G
Sbjct: 277 DAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAG 318
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 166/412 (40%), Gaps = 60/412 (14%)
Query: 230 EFGKKRDLVSALRAYDASKKH-LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
E ++ D L + SKK PN + +I G G + +++++ +
Sbjct: 19 ELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQ 78
Query: 289 LNIYVFNSLMNVNAHDLKF--TLEVYKNMQK---LGVMADMASYNILLKACCLAGNTVLA 343
+ Y + +L+N F L V+ +M++ + + N L+ A G A
Sbjct: 79 ADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQA 138
Query: 344 QEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG----VTP 396
+++ +++ G+ + +V TY+ ++ + +KV + M V P
Sbjct: 139 IQVFFDMRD-GTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQP 197
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+ T+++LINAC GL E+A L + M++ G +P+ L+ A +A ++ A F
Sbjct: 198 NSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTF 257
Query: 457 RSWTLSKTQV----------ALGED--YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ + V A G + Y + M+H
Sbjct: 258 KGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHS------------------- 298
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDAC 558
+P TY LM+A Y + + + N MR G N + ++ LIDA
Sbjct: 299 -----GLRPNQVTYLSLMEA----YGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAY 349
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G +GN A ++L +MR G P+++ Y+ + C +S +A L ++
Sbjct: 350 GKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQ 401
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 141/337 (41%), Gaps = 33/337 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ V +GK + AL + K+ PN C +ID G Y ++ ++
Sbjct: 84 YTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFF 143
Query: 281 DLRSQNVTL------NIYVFNSLMNVNAHD--LKFTLEVYKNMQK----LGVMADMASYN 328
D+R L N+ +N L++ + L ++V + M+ V + A+YN
Sbjct: 144 DMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYN 203
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ AC G A+E+ V + GV + D TY+ ++ + A W+ A +
Sbjct: 204 TLINACGKGGLYEKAEEL---VDLMVEHGV-QPDHITYTALIDAYGKAGLWENAENTFKG 259
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V+ + + ++++I+A GL ++A +F+ M +G PN L++A +A
Sbjct: 260 MKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGL 319
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ + +F + Y+GN S++ + N++ + +R
Sbjct: 320 PEESRNVF--------NIMRESGYEGNVLIYSSL----IDAYGKAGNYLEAARMLDMMRR 367
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+P TY+ ++ +CC + + L+ ++ G
Sbjct: 368 AGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 25/362 (6%)
Query: 290 NIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ FN+L+N + + T VY M G + D+ +++ L+ C G A E+
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V ++AKG K ++ TY+ ++ F + A + +ML+ G + NT+ +++LI+
Sbjct: 405 ---VNDMDAKGC-KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G + +A+ +F EM GC+P+ N L+ + + A L+R L +
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL---EG 517
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP-TTTTYNILMKAC 525
+ NT + + + Q N D F P TYN L+KA
Sbjct: 518 VIANSVTFNTLIHAFLRRGEIQEALKLVN----------DMLFRGCPLDEITYNGLIKAL 567
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C K L EM GL+P+ I+ ILI+ +G V AL+ ++ M G SPD+
Sbjct: 568 CKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDI 627
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y + I + R+++A +LFE+++ IQP+ +TY TL+ R G+ + C +
Sbjct: 628 VTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA--CFLL 685
Query: 644 YQ 645
Y+
Sbjct: 686 YR 687
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 150/353 (42%), Gaps = 39/353 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN++L + +A ++ + + +KGV D +T+ ++K A +
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYD---MLSKGVSPND-YTFGLVMKALCMVNEVDNACLL 232
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G PN++ + +LI+A + V++A+ L EEM GC P+ N ++
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYG--- 289
Query: 446 ACQFDRAFR--------LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-- 495
C+ +R + + +T + T RI E + S PN
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRID--EAQALLSKVPGPNVV 347
Query: 496 --------FVPNSHYSS-----FDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNE 538
FV N + +DK + + P T++ L+ C + L+N+
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN ++TILID G +E A IL+ M G S + V Y I + +
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A +F EM +P++ T+ +L+ R + E++ LA+Y+DM G
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR---VDEMEDALALYRDMVLEG 517
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 24/349 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F V KK SAL + PN+ +ID G C G ++ I +
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILID--GFCKKGQLEEAGLILRE 442
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ +LN +N+L++ K L+++ M G D+ ++N L+ C
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +Y + + +GV+ V T++T++ F Q ALK+ DML G + I
Sbjct: 503 MEDALALY---RDMVLEGVIANSV-TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEI 558
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI A G VE+ + LFEEM++ G P+ CNIL+ A + A R
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDM 618
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D I+ + + + I N +P + TYN
Sbjct: 619 ----IHRGFSPDIVTYNSLINGLCKRGR--IQEALNLFEKLQAE------GIQPDSITYN 666
Query: 520 ILMKACCTDYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSGNVEG 566
L+ C + A R V G PN ++W IL+ G N EG
Sbjct: 667 TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEG 715
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 158/392 (40%), Gaps = 36/392 (9%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
RS NV L++ V + +V ++ V+ +M GV + ++ +++KA C+
Sbjct: 175 FRSYNVVLDVLVVGNCPSVASN-------VFYDMLSKGVSPNDYTFGLVMKALCMVNEVD 227
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + + Y T++ + ALK+ E+M G P+ T+
Sbjct: 228 NACLL---LRDMTKHGCVP-NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTF 283
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-- 459
+++I V + L + M+ G PN L+ + C+ D A L
Sbjct: 284 NTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG 343
Query: 460 --TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSF----- 511
+ + G +G + + + + P+ F ++ + K+ F
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 512 ----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
KP TY IL+ C +A ++ EM T G S N + + LI A
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL + M G PD+ + + I R ++ A +L+ +M + N V
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T+ TL+ A R G E+Q+ L + DM G
Sbjct: 524 TFNTLIHAFLRRG---EIQEALKLVNDMLFRG 552
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 183/396 (46%), Gaps = 32/396 (8%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLK 306
+HL +PN++ +ID G+ +++RA++ +++ + ++ +NSL++ +L+
Sbjct: 192 EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ M+K G AD+ +YN L+ G A +GE+K L GV+ +V T
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL---GVMA-NVVTL 307
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ PN T++SL++ AG ++ A+ L +EM+
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367
Query: 427 AGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G PN +++ C E +VA+ +D +R ++
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEG------------------KVAVADDVLSLMERAGVKANE 409
Query: 486 DKQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACC--TDYYRVKALMNE 538
+ +F+ + + D K + + Y L+ C K+L+++
Sbjct: 410 LLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHK 469
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL PN + +T ++DA +G A+ +L + + G+ P+VV Y I ++
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +A S F++M+ + PN+ Y TL+ + GSL
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSL 565
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 218/527 (41%), Gaps = 60/527 (11%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L D G ++ V + + + R+P +++L N+ L R +P ++
Sbjct: 143 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG-GLVRRLFEHLPAPNVFT 201
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N V +F K+ +LV A + K SP++ ++ID G CG+ + + ++R
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +N+L+N + KF + M++LGVMA++ + + + A C G
Sbjct: 262 KSGCAADVVTYNALINCFS---KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ +++ +G++ + FTY+++V A A+ + ++M+ G+ PN
Sbjct: 319 LVREAMKLFAQMR---VRGMMP-NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T++ +++ G V A + M +AG + N L+ +RA L
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434
Query: 459 -----------------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
W L K Q D ++ HK + +
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQ---------KLDEAKSLLHKMDDCGLRPNTVIYTTI 485
Query: 502 YSSFDKRF---------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+F K +P TY L+ C Y + ++MR +GL
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +T LID G++ A+ ++ M + GMS D V YT+ I ++ L+ AF+
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFA 605
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +M +Q +L Y + S + +++ +Q+ V +M G
Sbjct: 606 LKAKMIETGLQLDLYCYTCFI---SGFCNMNMMQEARGVLSEMIGTG 649
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 44/367 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + K GRL++ A+++ +V +G V ++++ ++ G+ K EG++
Sbjct: 342 YTSLVDGTCKAGRLDD-AIVLLDEMVHQGLVP---NVVTYTVMVDGLCK---EGKVAVAD 394
Query: 134 GVLKKLNELGVAPLELFDGS---GFKLLKNECQRLLD------SGEVEMFVGLMEVLEEF 184
VL + GV EL + G + KN +R LD + +E+ V L L
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNS-ERALDLLNEMKNKGMELDVSLYGTLIWG 453
Query: 185 RLPVKELDEEFRIVQL---CVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSAL 241
V++LDE ++ C +P+ + Y I+ D F + GK+ + V+ L
Sbjct: 454 LCKVQKLDEAKSLLHKMDDCGLRPNT---VIYTTIM---DAFF-----KAGKESEAVALL 502
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
S PN+ +ID G+C G ++ + ++ +R + N+ V+ +L++
Sbjct: 503 HKIPDSGLQ---PNVVTYCALID--GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
L + + M G+ D Y L+ G+ L + K +E
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGD--LQGAFALKAKMIETG- 614
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+LD++ Y+ + F + Q A V +M+ G+TP+ ++ LI G +E+A
Sbjct: 615 -LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEA 673
Query: 418 MHLFEEM 424
L EM
Sbjct: 674 SSLQNEM 680
>gi|168024390|ref|XP_001764719.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684013|gb|EDQ70418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1020
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 136/604 (22%), Positives = 250/604 (41%), Gaps = 117/604 (19%)
Query: 10 SSSSAIVATQTRLYNHRNKPNKHP--VTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDL 67
S S+A V +T H KP P V KL +AS L + LLST
Sbjct: 166 SYSTARVLQET--ATHGGKPTTSPKVVAKLDSVASEKLL---------RPKLLST----- 209
Query: 68 SSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREG 127
D+ + K GR+ A I E + + G KF L ++ +G +K
Sbjct: 210 --------DVVKSVRKKGRVLP-ASIAEVLPLKPGTSIKFYIDLYASLLKAGRIK----- 255
Query: 128 RIDCVV--GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
DC+V G + KL++L + +++ +++ K + G VE +++ +
Sbjct: 256 --DCLVLLGEINKLDKLSL--MKVNHSKFYEVCKTK-------GTVEDAFTFAKIMRVY- 303
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVP----RADILFCNFV----REFGKKRDL 237
L ++ +C + D++ A+R +V +AD +F + + GK L
Sbjct: 304 ---STLQHYTMLLSVCCHAKDIDGALRVLALVESRGFKADCVFYTTLISACSKAGKVDLL 360
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
L D + N++ +ID C G K+ Y + S++V + +FN+L
Sbjct: 361 FQILHEMDVAGVEA---NVHTFGAMIDGCARAGQLPKAFGAYGIMISKDVKPDRVIFNTL 417
Query: 298 MN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+N V A F + + V D +Y L+ AC G A E+Y ++
Sbjct: 418 INACSRVGAVQRAFDVLADMKSEATPVKPDHVTYGALISACAKGGEVGRALEVYQSMREN 477
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ KG L Y+ V + AL + +D+L GV P+ + +S+L++A ++G
Sbjct: 478 DVKGFLA----CYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGD 533
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V++A + + M ++G +P + + L+ C ++++ ++ SK
Sbjct: 534 VDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSK---------- 583
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYR 531
+PT +TYN LM A C + R
Sbjct: 584 -------------------------------------LRPTVSTYNALMTALCEAKQFDR 606
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+++N+++ G +PN +S++IL+ AC G + AL + R +G+ P++V + I
Sbjct: 607 ALSVLNDLKDAGRTPNQVSYSILLKACEREGKADMALDLYTTARAEGIKPNLVICDSIIG 666
Query: 592 VCVR 595
+C++
Sbjct: 667 LCLQ 670
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 161/395 (40%), Gaps = 79/395 (20%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---------------NAHDLKFTLEVYKNMQKLGVMAD 323
YE +++ + + F +M V +A D+ L V ++ G AD
Sbjct: 281 YEVCKTKGTVEDAFTFAKIMRVYSTLQHYTMLLSVCCHAKDIDGALRVLALVESRGFKAD 340
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y L+ AC AG L +I E ++ GV + +V T+ ++ A A A
Sbjct: 341 CVFYTTLISACSKAGKVDLLFQILHE---MDVAGV-EANVHTFGAMIDGCARAGQLPKAF 396
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC--EPNSQCCNILLQ 441
M+S V P+ + +++LINAC+ G V++A + +M +P+ L+
Sbjct: 397 GAYGIMISKDVKPDRVIFNTLINACSRVGAVQRAFDVLADMKSEATPVKPDHVTYGALIS 456
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC + + RA +++S M D
Sbjct: 457 ACAKGGEVGRALEVYQS-----------------------MREND--------------- 478
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
K Y + AC D A+ +++ G+ P+ + ++ L+DA G
Sbjct: 479 ---------VKGFLACYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAG 529
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG+V+ A IL IMR+ GM P V Y++ + VC ++ ++E ++ +++P +
Sbjct: 530 HSGDVDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSKLRPTVS 589
Query: 620 TYITLLRARSRYGSLHEVQQ---CLAVYQDMWKAG 651
TY L+ A L E +Q L+V D+ AG
Sbjct: 590 TYNALMTA------LCEAKQFDRALSVLNDLKDAG 618
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 159/394 (40%), Gaps = 56/394 (14%)
Query: 73 YYADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSLEMVASGIVKSIREGRID 130
+Y + S +K G+++ I+ + V+ E NV F +M I R G++
Sbjct: 343 FYTTLISACSKAGKVDLLFQILHEMDVAGVEANVHTFGAM---------IDGCARAGQLP 393
Query: 131 CVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKE 190
G + V P + F L N C R+ G V+ ++ ++ PVK
Sbjct: 394 KAFGAYGIMISKDVKPDRVI----FNTLINACSRV---GAVQRAFDVLADMKSEATPVK- 445
Query: 191 LDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
PD + Y + I C E G+ ++ ++R D
Sbjct: 446 --------------PD---HVTYGAL-----ISACAKGGEVGRALEVYQSMRENDVK--- 480
Query: 251 LSSPNMYICRTI-IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKF 307
C T + C GD + AIY+DL V + F++L++ H D+
Sbjct: 481 ----GFLACYTAAVHACSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGDVDK 536
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ M+K G+ Y+ L+ C G E+Y ++ + L+ V TY+
Sbjct: 537 AFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYEGIRSSK----LRPTVSTYN 592
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ +AK + AL V D+ AG TPN +++S L+ AC G + A+ L+
Sbjct: 593 ALMTALCEAKQFDRALSVLNDLKDAGRTPNQVSYSILLKACEREGKADMALDLYTTARAE 652
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
G +PN C+ ++ C++ Q A L SW++
Sbjct: 653 GIKPNLVICDSIIGLCLQQIQTSVAAPLV-SWSI 685
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 25/211 (11%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ F V G D+ A D +K P + +++ VC G++ K +YE
Sbjct: 518 EVFFSALVDAAGHSGDVDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLGEWEKGLEVYE 577
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+RS + + +N+LM A L V +++ G + SY+ILLKAC G
Sbjct: 578 GIRSSKLRPTVSTYNALMTALCEAKQFDRALSVLNDLKDAGRTPNQVSYSILLKACEREG 637
Query: 339 NTVLAQEIYG-----------------------EVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+A ++Y +++ A ++ + + + +
Sbjct: 638 KADMALDLYTTARAEGIKPNLVICDSIIGLCLQQIQTSVAAPLVSWSILPPADNSNISSQ 697
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+W AL + + AGV P S L+
Sbjct: 698 QQWVTWALTIYRQTIEAGVLPTVEILSQLLG 728
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 41/443 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L + + F K D AL + +P +I G G ++ AI+E+
Sbjct: 282 LLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEE 341
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + I FN+L+ A LK + M+K G+ D +Y +L+ A G
Sbjct: 342 MKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGR 401
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA+ V + + F +S I+ + D WQ +V +M ++ V P+
Sbjct: 402 WESARHL---LKQMEARNV-QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRH 457
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ ++ AM ++ ML G EP+ N L+ + DRA LF
Sbjct: 458 FYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEM 517
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHYSSFDKRFSFKPTT 515
+ + Y+ + + E D+ I + +PN
Sbjct: 518 Q-ERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN---------------V 561
Query: 516 TTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TY L+ D Y N+ M++ GL P+ + LI+A G E A+
Sbjct: 562 VTYTTLV-----DIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAV 616
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++M DG+ P ++A + I +R +AFS+ + MK ++P++VTY TL++A
Sbjct: 617 NAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKAL 676
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R +V AVY++M +G
Sbjct: 677 IRVDKFDKVP---AVYEEMILSG 696
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 173/404 (42%), Gaps = 46/404 (11%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE + SQ TL +N+L+ A +DL+ L + M++ G +D +Y+++
Sbjct: 191 RSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLI 250
Query: 331 LKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ + L Q++Y E++ ++LD + I+ FA A AL
Sbjct: 251 IQSLTRTNKIDIPLLQKLYEEIE----SDKIELDGLLLNDIILGFAKAGDPNRALYFLSM 306
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ ++G+ P T T+ ++I+A N G E+A +FEEM + G +P + N LL+
Sbjct: 307 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366
Query: 449 FDRAFRLFRSWTLSKTQVALGE-------DYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + + K+ ++ E D N R + H KQ N PN+
Sbjct: 367 LKEAESIISE--MEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQ--MEARNVQPNTF 422
Query: 502 YSS-----------FDKRF---------SFKPTTTTYNILM----KACCTDYYRVKALMN 537
S + K F + KP YN+++ K C D+ +
Sbjct: 423 IFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDH--AMETYD 480
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M + G+ P+ ++W LID G + A ++ + M+E G P Y I +
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + L +M+ + PN+VTY TL+ G ++ CL
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCL 584
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 166/383 (43%), Gaps = 29/383 (7%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +YE++ S + L+ + N ++ A D L +Q G+ +++ ++ A
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G T A+ I+ E+K +G LK + ++ ++K +A + A + +M +G
Sbjct: 326 LGNHGRTEEAEAIFEEMK----EGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSG 381
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++P+ T+ L++A AN G E A HL ++M +PN+ + +L + + ++ + F
Sbjct: 382 LSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTF 441
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFS-- 510
+ R S + DR H I F H ++D+ S
Sbjct: 442 EVLREMKNSNVK----------PDR-----HFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P T+N L+ Y R L EM+ G P ++ I+I++ G +
Sbjct: 487 IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L M+ G+ P+VV YTT + + S R A E MK ++P+ Y L+ A
Sbjct: 547 ILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAF 606
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
++ G +Q + Y+ M G
Sbjct: 607 AQRGL---SEQAVNAYRVMISDG 626
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ +L P Y +I+ G + + + + ++SQ + N+ + +L+++ H +F
Sbjct: 520 RGYLPCPTTY--NIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRF 577
Query: 308 T--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++ + M+ G+ YN L+ A G L+++ + + + G L+ +
Sbjct: 578 NDAIDCLEAMKSAGLKPSATMYNALINAFAQRG---LSEQAVNAYRVMISDG-LRPSLLA 633
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++++ F + + A + + M V P+ +T+++L+ A ++ ++EEM+
Sbjct: 634 LNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMI 693
Query: 426 QAGCEPNSQCCNILLQA 442
+GC P+ + +L A
Sbjct: 694 LSGCTPDGKARAMLRSA 710
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 177/386 (45%), Gaps = 35/386 (9%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+++ E++ S + NIY + + V A + + K M+ G D+ +Y +L+ A
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDA 308
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG A E++ ++K K D TY T++ F+D + +M + G
Sbjct: 309 LCTAGKLDDAMELFVKMKASSHKP----DRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ IT++ L+NA AG +++A HL + M + G PN N L+ + + D A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 454 RLFRSW-TLSKTQVA----LGEDYDGNTDRISN-MEHKDKQSITN-TPNFVP-NSHYSSF 505
LF + TL A L D+ G + R +E +K I PN V N+ S
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + K + N +++ GL+P+ +++ +++ +G V+
Sbjct: 485 AEMGRLR------------------EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++L M E+ PD++ + I ++ R+ +A+ +F +K ++ P +VTY TL+
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G +VQ+ + ++ M G
Sbjct: 587 AGLGKEG---QVQRAMELFASMTGNG 609
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 31/347 (8%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++K C ++AQ ++ ++ + GV K + +Y+ +++ F +MA + +M
Sbjct: 760 IIKVLCKHKQALVAQSVF--IRFTKELGV-KPTLESYNFLIEGFLGVHNDEMAWNLFTEM 816
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+AG P+ T++ L++A +G + + L+E+M+ + C+PN+ NI++ V++
Sbjct: 817 KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSL 876
Query: 450 DRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSIT---NTPNFVPNSH 501
D+A LF S S T G DG + R+ + ++ + N + N
Sbjct: 877 DKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNIL 936
Query: 502 YSSFDK---------------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+ F K R +P +Y L+ C AL +++ GL
Sbjct: 937 INGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ I++ ++ID G S +E AL + M+ G++PD+ Y + I + ++QA
Sbjct: 997 YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGK 1056
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+EE++ ++PN+ TY L+R S G+ AVY+ M G
Sbjct: 1057 LYEELQFIGLEPNVFTYNALIRGYSMSGN---SDSAYAVYKRMMVGG 1100
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 143/343 (41%), Gaps = 52/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ T + M++ G + SYN L+ +G A E+Y + + +G LK +
Sbjct: 175 LRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMY---RRMVLEG-LKPSLK 230
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+S ++ + + + E+M S G+ PN T++ I AG +++A + + M
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM 290
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
GC P+ +L+ A A + D A LF S + DR++ +
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK----------PDRVTYITM 340
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
DK S C D RVK +EM G
Sbjct: 341 LDKFSD-----------------------------------CGDLGRVKEFWSEMEADGY 365
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ I++TIL++A +GN++ A +L +MR+ G+ P++ Y T I +R RL A
Sbjct: 366 APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALD 425
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
LF M+ + P TYI + YG + L ++ M
Sbjct: 426 LFNNMETLGVVPTAYTYILFI---DFYGKSGRSDKALETFEKM 465
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 166/415 (40%), Gaps = 43/415 (10%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+ + K P+ T++D CGD + + + ++ + ++ F
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+N A ++ + M+K GV+ ++ +YN L+ A +++ ++E
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF---NNME 431
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
GV+ +TY + + + AL+ E M G+ PN + ++ + + A G +
Sbjct: 432 TLGVVP-TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRL 490
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+A +F + G P+S N++++ +A Q D A L
Sbjct: 491 REAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL------------------- 531
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMK 523
+S+M + N + N+ Y + K PT TYN L+
Sbjct: 532 ----LSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIA 587
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ R L M G PN I++ ++D + V+ AL++L M P
Sbjct: 588 GLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMP 647
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DV+ + T I V KR+ A LF +MK + P+ VT TLL + G + +
Sbjct: 648 DVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMED 701
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 20/340 (5%)
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
TL Y F + H+ + ++ M+ G D+ +YN+LL A +G E+Y
Sbjct: 789 TLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + T++ I+ + AL + D++S +P T+ L++
Sbjct: 849 EQMICSSCKP----NTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+G +E+A LFEEM+ GC PN+ NIL+ + + A LF+ +
Sbjct: 905 LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV----REG 960
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRFSFKPTTTTYNILMKACC 526
+ D T + + + V ++ HY K+ + YN+++
Sbjct: 961 IRPDLKSYTSLVGCLCEAGR---------VDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011
Query: 527 TDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +AL +EM++ G++P+ ++ LI G +G VE A ++ + ++ G+ P+V
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
Y I+ S A+++++ M PN T+ L
Sbjct: 1072 TYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 178/441 (40%), Gaps = 33/441 (7%)
Query: 216 IVPRAD--ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+VP A ILF +F +GK AL ++ K +PN+ C + G
Sbjct: 435 VVPTAYTYILFIDF---YGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLR 491
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I+ L+S + + +N +M A + +E+ +M + D+ N L+
Sbjct: 492 EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AG A +++ +K ++ L V TY+T++ Q A+++ M
Sbjct: 552 NTLYKAGRVDEAWKMFCRLKDMK----LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PNTIT++++++ V+ A+ + +M C P+ N ++ V +
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667
Query: 452 AFRLFRSW--TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF L+ V L G + N +D I +FV + D+RF
Sbjct: 668 AIWLFHQMKKMLTPDCVTLCTLLPG---VVKNGLMEDAFKIAE--DFV-HRLGVYVDRRF 721
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG---LSPNHISWTILIDACGGSGNVEG 566
+ LM T K ++ R V + I+ C +
Sbjct: 722 --------WEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
++ +E G+ P + +Y I+ + + A++LF EMK+ P++ TY LL
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
A + G ++E+ +Y+ M
Sbjct: 834 AHGKSGKINEL---FELYEQM 851
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN I +I+ G GD + +++ + + + ++ + SL+ A + L
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ +++ G+ D +YN+++ + A +Y E ++++G+ D+FTY++++
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE---MQSRGI-NPDLFTYNSLIL 1043
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + A K+ E++ G+ PN T+++LI + +G + A +++ M+ GC P
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSP 1103
Query: 432 NS 433
N+
Sbjct: 1104 NT 1105
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 51/297 (17%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
V +L ++K D+ TY I K +F Q + M AG N +++ LI+
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGK-MREAGFHLNAYSYNGLIHLL 204
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+GL +A+ ++ M+ G +P+ + T S VA
Sbjct: 205 LQSGLCREALEMYRRMVLEGLKPSLK-------------------------TFSALMVAT 239
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+ D T + S +E + KP TY I ++
Sbjct: 240 GKRRDTETVK-SLLEEMES---------------------LGLKPNIYTYTICIRVLGRA 277
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A +M M G P+ +++T+LIDA +G ++ A+++ M+ PD V Y
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
T + L + + EM+ P+++T+ L+ A + G++ E L V
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDV 394
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK D+ +A + + P++ +++ G + +E L+
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ L+ +N +++ +H ++ L +Y MQ G+ D+ +YN L+ +AG A
Sbjct: 996 LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++Y E++ + L+ +VFTY+ +++ ++ + A V + M+ G +PNT T++ L
Sbjct: 1056 KLYEELQFIG----LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Query: 405 IN 406
N
Sbjct: 1112 PN 1113
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 204/473 (43%), Gaps = 68/473 (14%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+I+ N+ + EF K ++S + +K P++ ++D GD + A+
Sbjct: 160 NIMVHNYCKALEFDKVDAVISEM------EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S+ + I +NS++ + EV+K M GV D+ S+ IL+ C
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A +IY E++H +G+ K D+ ++S ++ +FA A+ +M G+ P
Sbjct: 274 VGEIEEALKIYKEMRH---RGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-------------- 442
+ + ++ +I AGL+ A+ + +EM+ GC P+ N LL
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 443 ----------------------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
C+E + D+A +LF + + + + Y+ D +
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEG-KLDKALQLFDTMLNQRLRPDI-VTYNTLIDGMC 447
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
DK N + R F P TY+IL+ + C A ++E
Sbjct: 448 RQGDLDKA----------NDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLDE 496
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ PN +++ +I SGNV + L+ M + +SPD++ Y T I ++ +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ AF L M+ ++QP++VTY L+ S +G+ VQ+ +++ M G
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN---VQEAGWIFEKMCAKG 606
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 29/380 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +KG LK + TY++++K + W A +V ++M GV P
Sbjct: 204 AGDAEAAMAL---VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI G +E+A+ +++EM G +P+ + L+ + D A
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R R + L V G + + + V + P
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFC----------RAGLMSDALRVRDEMVGC-----GCLP 364
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEMR G+ P+ ++T LI G ++ ALQ+
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G +V+ +M G
Sbjct: 485 G---QVEDAFGFLDEMINKG 501
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 18/247 (7%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + L AL+ +D P++ T+ID G+C GD K
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID--GMCRQGDLDK 454
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNIL 330
+ +++D+ S+ + N ++ L +++H K +E M G++ ++ +YN +
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSIL--IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKED 388
+K C +GN Q K L+ V K+ D+ TY+T++ + A K+
Sbjct: 513 IKGYCRSGNVSKGQ------KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V P+ +T++ LIN + G V++A +FE+M G EP+ ++ V A
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626
Query: 449 FDRAFRL 455
AF+L
Sbjct: 627 SKEAFQL 633
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/472 (19%), Positives = 192/472 (40%), Gaps = 78/472 (16%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R G D V K++++ GVAP D F +L R+ GE+E +++ +E
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAP----DVRSFTILIGGFCRV---GEIEE---ALKIYKEM 287
Query: 185 R-LPVKELDEEFR-IVQLCVNKPDVNLAIRY----AC--IVPRADILFCNFVREFGKKRD 236
R +K F ++ L + ++ A+ Y C +VP +++ + F +
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCRAGL 346
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVF 294
+ ALR D P++ T+++ G+C + + + + ++R + V ++ F
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLN--GLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ + K L+++ M + D+ +YN L+ C G+ A +++ ++
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
E + + TYS ++ + + A ++M++ G+ PN +T++S+I +G
Sbjct: 465 RE----IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V + ++M+ P+ N L+ ++ + AF+L
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL---------------- 564
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYY 530
NM K+K +P TYN+L+ +
Sbjct: 565 --------NMMEKEK-----------------------VQPDVVTYNMLINGFSVHGNVQ 593
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ +M G+ P+ ++ +I+ +GN + A Q+ M + G +PD
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 180/398 (45%), Gaps = 23/398 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + G+ K ++E L+ ++ + L+N+ A K + LEV K M
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMM 507
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ +V K LK DV Y+ I++ F
Sbjct: 508 ESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV----VKDGLKPDVVLYNNIIRAFCG 563
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG +++A+ +F+ M ++GC P
Sbjct: 564 MGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHT 623
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE Q ++A + L+ N + + H
Sbjct: 624 FNALILGLVEKRQMEKAIEILDEMALAGVSP--------NEHTYTTIMHGYAALGDTGKA 675
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
F Y + + + TY L+KACC AL EM + N + I
Sbjct: 676 F----EYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNI 731
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A +++ M++ G+ PD+ YT+ I C ++ + +A + EEM+
Sbjct: 732 LIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSG 791
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL+ +R SL E + L +Q+M AG
Sbjct: 792 VKPNVKTYTTLIHGWAR-ASLPE--KALRCFQEMKLAG 826
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 185/444 (41%), Gaps = 69/444 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R++ + +V+ SL++ A D++ L + M++ GV + +Y
Sbjct: 320 GDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTY 379
Query: 328 NILLKACCLAGNTVLAQE---------------IYGE-----------------VKHLEA 355
+I++ GN A IYG V+ +E
Sbjct: 380 SIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEG 439
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V E + G P+ +++ LIN A G +
Sbjct: 440 EGIDAPIDI--YHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKI 497
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M AG + N + ++L+ ++ + AF +F K V L +
Sbjct: 498 SKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNI 557
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSH-----------YSSFD--KRF 509
G DR + M+ + + + T F+P H FD +R
Sbjct: 558 IRAFCGMGTMDRAICMVKEMQKERHRPTSRT--FMPIIHGFARAGEMKRALDVFDMMRRS 615
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT T+N L+ KA+ ++EM G+SPN ++T ++ G+ A
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKA 675
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +R++G+ DV Y +K C +S R++ A ++ +EM I N Y L+
Sbjct: 676 FEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDG 735
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G + E + Q M + G
Sbjct: 736 WARRGDVWEAADLM---QQMKQGG 756
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SPN + TI+ GD K+ + LR + + L++Y
Sbjct: 633 EKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVY 692
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ ++
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 752
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G +K D+ TY++ + A A K+ E+M ++GV PN T+++LI+ A
Sbjct: 753 K----QGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWAR 808
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ F+EM AG +P+ + L+ A + A+
Sbjct: 809 ASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 135 VLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRL 186
V ++L E G AP + L+ G E ++++S ++ + +L L
Sbjct: 468 VFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFL 527
Query: 187 PVKELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRADILFCNFVREFGKKR----- 235
+K+ F I + V KPDV N IR C + D C V+E K+R
Sbjct: 528 KLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAIC-MVKEMQKERHRPTS 586
Query: 236 --------------DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
++ AL +D ++ P ++ +I G+ +AI
Sbjct: 587 RTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALI--LGLVEKRQMEKAIEIL 644
Query: 280 EDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ V+ N + + ++M+ A D E + ++ G+ D+ +Y LLKACC +
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKS 704
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTP 396
G Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P
Sbjct: 705 GRM---QSALAVTKEMSAQNIPR-NTFVYNILIDGWARRGDVWEAA-DLMQQMKQGGVKP 759
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ T++S INAC AG + +A + EEM +G +PN + L+ A ++A R F
Sbjct: 760 DIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCF 819
Query: 457 RSWTLS 462
+ L+
Sbjct: 820 QEMKLA 825
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 35/358 (9%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y C +I++ G K+ + + + S + N+ ++ L+N + D ++++
Sbjct: 484 YGC--LINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFED 541
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+ K G+ D+ YN +++A C G A + E++ + + T+ I+ FA
Sbjct: 542 VVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSR----TFMPIIHGFA 597
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL V + M +G P T+++LI +E+A+ + +EM AG PN
Sbjct: 598 RAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEH 657
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNMEHKDK 487
++ +AF F Q+ + Y+ + R+ S + +
Sbjct: 658 TYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDV-YTYEALLKACCKSGRMQSALAVTKE 716
Query: 488 QSITNTP--NFVPNSHYSSFDKRF---------------SFKPTTTTYNILMKACCT--D 528
S N P FV N + +R KP TY + ACC D
Sbjct: 717 MSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGD 776
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
R +M EM T G+ PN ++T LI + E AL+ + M+ G+ PD Y
Sbjct: 777 MLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVY 834
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 21/260 (8%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + +++ A G + +A FE M G EP S L+ A + A
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363
Query: 456 FRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R +++L Y G +I N + D+ + R S
Sbjct: 364 ARKMKEEGVEMSL-VTYSIIVGGFAKIGNADAADRW-------------FKEAKDRHSHM 409
Query: 513 PTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
N++ C T + + +AL+ EM G+ + ++D GN E L +
Sbjct: 410 NAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVF 469
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++E G +P VV+Y I + + ++ +A + + M+ I+ N+ TY L+ +
Sbjct: 470 ERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLING---F 526
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
L + A+++D+ K G
Sbjct: 527 LKLKDWANAFAIFEDVVKDG 546
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 19/332 (5%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-----KHLEAKGVLKLD 362
LEV K+++K G+ SYN + A G A ++ V ++ A L+ D
Sbjct: 3 ALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPD 62
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
T+ST + A WQ A+ + +M + G+ PN T+++LI AC G V +A +FE
Sbjct: 63 TVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFE 122
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M G N + +C + + RA +L Q L + IS
Sbjct: 123 RMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNL----QAYSAAISAC 178
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E + P KP Y+ +M AC + + +M+
Sbjct: 179 EKAAEAR--------PALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMK 230
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL+P+ ++++ LI A +G AL++ ++M + G+ P+V+AYT AI C ++ +
Sbjct: 231 REGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWR 290
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++ L E MK +++P+ V Y ++ A SR G
Sbjct: 291 RSLGLLERMKADKLRPDAVAYNFVISALSRGG 322
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 151/354 (42%), Gaps = 55/354 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ T I C G++ ++ +Y ++ +Q + N + F +L+ + EV
Sbjct: 61 PDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEV 120
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ MQ G++ ++ ++ + +C G+ A ++ ++ + AKG+ + ++ YS +
Sbjct: 121 FERMQARGIVGNVYTFTAAISSCEKLGDWQRALKL---LEEMIAKGI-QPNLQAYSAAIS 176
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A + AL + E M + + P+ I +S+++ AC AGL E A +F++M + G P
Sbjct: 177 ACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTP 236
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+QA A ++ RA +F+
Sbjct: 237 DVVAYSTLIQAYQRAGEWSRALEVFQ---------------------------------- 262
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
++ +P Y + AC ++ R L+ M+ L P+ +
Sbjct: 263 -------------LMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAV 309
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++ +I A G + L +L+++ ED P++ Y T IK C + + ++A
Sbjct: 310 AYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQWEKAL 363
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 42/328 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + K + A+ Y + PN + +I C G K+ ++E
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++ + N+Y F + ++ D + L++ + M G+ ++ +Y+ + AC A
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAE 183
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ G ++ + + + K D+ YS ++ A W+ A ++ + M G+TP+ +
Sbjct: 184 ---ARPALGLLERMTNEKI-KPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+S+LI A AG +A+ +F+ M +AG PN + AC +A ++ R+ L
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERM 299
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
K + ++ G +D + +E + Q
Sbjct: 300 KADKLRPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQ------------------- 340
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL 535
P +TY ++KAC + KAL
Sbjct: 341 -----PNISTYCTVIKACGDNGQWEKAL 363
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL-----------MNEMRTVGLSPNHISWTILIDACGGS 561
PT +YN M A + +AL N++ L P+ ++++ I AC
Sbjct: 17 PTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDTVTFSTAISACAKG 76
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + A+ + M G+ P+ + I C + ++ +AF +FE M+ I N+ T+
Sbjct: 77 GEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTF 136
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + + G + Q+ L + ++M
Sbjct: 137 TAAISSCEKLG---DWQRALKLLEEM 159
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE---------EMKHYQIQ 615
E AL++LK + ++G++P V+Y A+ R+ R ++A S+F+ ++ ++
Sbjct: 1 EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
P+ VT+ T + A ++ G E Q+ + +Y +M
Sbjct: 61 PDTVTFSTAISACAKGG---EWQRAMNMYHEM 89
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 24/366 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +NV+ + + + L++ A L ++++ + GV +Y L+ C+A +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ ++ +G V TY+ I+ + A + + M+ G P+ +
Sbjct: 61 FDDARELFADMNR---RGCPPSPV-TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++++++ +G VE+A+ LF EM + GC PN + N ++ + + D+A ++F
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTT 517
E D D S D + N Y F + P+ T
Sbjct: 177 ----------EARDIPPDSWSYGILIDGLAKAGK----LNEAYKLFRRMLDSGITPSAVT 222
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+++ C Y +A L MR+ G P+ ++ ILIDA G ++ A ++LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+DG PDVV Y+T I R+ A L E+M Q +P +VT TL+ + G +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 636 EVQQCL 641
E ++ L
Sbjct: 343 EAREVL 348
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 168/366 (45%), Gaps = 23/366 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N++M+ + ++ L ++ M++LG + S+N ++ C A +++
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E +EA+ + D ++Y ++ A A A K+ ML +G+TP+ +T++ +I+
Sbjct: 174 HE---MEARDIPP-DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +++A+ LF+ M GC P+ NIL+ A + + D AFRL + T
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT------- 282
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DG+ + + + H + KPT T N L+ C
Sbjct: 283 ----DDGHVPDVVTYSTL-ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +++ M + G SP+ +++ L+ +G E A ++L M G++P+VV
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT + ++ RL +A +F +MK PNL TY L+ + S +V L ++
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG---FCSAGQVDGGLKLFG 454
Query: 646 DMWKAG 651
+M AG
Sbjct: 455 EMVCAG 460
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 180/427 (42%), Gaps = 36/427 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ + +ID G +R +++ L VT + + SL++ A+ E
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M + G +YN+++ A C G + +E +K + G + DV TY+T++
Sbjct: 67 LFADMNRRGCPPSPVTYNVIIDASCKRG---MLEEACDLIKKMIEDGHVP-DVVTYNTVM 122
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + AL + +M G TPN + +++I ++QA +F EM
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
P+S IL+ +A + + A++LFR ++ + + L D +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
+M K + T N + ++H D+ F P TY+ L+ C+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 528 DYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
RV + L+ +M P ++ LI +G ++ A ++L M G SPDVV
Sbjct: 303 -IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R+ + ++A L +M + PN+VTY L+ + L E V+
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA---CGVF 418
Query: 645 QDMWKAG 651
M +G
Sbjct: 419 AQMKSSG 425
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 161/386 (41%), Gaps = 40/386 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ ++ +PN TII G+C +A ++ ++ ++++ + + + L
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTII--LGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A L ++++ M G+ +YN+++ CLA A E++ K + +
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF---KSMRS 248
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
KG + FT++ ++ A ++ + M G P+ +T+S+LI+ + V+
Sbjct: 249 KGC-RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVA 467
A HL E+M++ C+P N L+ +A + A + + S +
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G G T+R + S R P TY L+ C
Sbjct: 368 HGHCRAGQTERAREL-------------------LSDMVAR-GLAPNVVTYTALVSGLCK 407
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A + +M++ G +PN ++T LI +G V+G L++ M G+SPD V
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKH 611
Y T +S R +A + E +
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRE 493
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + ED+ + + N+L++ A +K EV M G D+ +YN L+
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C AG T A+E+ + + A+G L +V TY+ +V A A V M S+
Sbjct: 369 GHCRAGQTERARELLSD---MVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+++LI +AG V+ + LF EM+ AG P+ L ++ + RA
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 453 FRLFRSWTLSKTQVALGED 471
+ R S A G++
Sbjct: 485 LEILREGRESLRSEAWGDE 503
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++S N++ + +L+ +A + L+++ M G+ D Y L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C +G + A EI E + +V+ ++ V DA +MAL DM+ G
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVRDMVRGGQ 533
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEML 425
P +SL+ +G +A + EE++
Sbjct: 534 LPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 183/406 (45%), Gaps = 56/406 (13%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ C ++I G C G K+ I E L + ++ +N L+ + ++ L
Sbjct: 139 PDVIACTSLIR--GFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL 196
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV ++++ V D+ +YN +L++ C +G A E+ E DV TY+ +
Sbjct: 197 EV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP----DVITYTIL 249
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+K+ ++M G P+ +T++ LIN G +++A+ M GC
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 309
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT-----------------QVALGEDY 472
+PN NI+L++ ++ A RL S L K + LG
Sbjct: 310 KPNVITHNIILRSMCSTGRWMDAERLL-SDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368
Query: 473 DGNTDRISNMEHKDKQS-ITNTPNFVPNSHYSSFDKRFSFK-------------PTTTTY 518
D +E K + N+ ++ P H +K+ P TY
Sbjct: 369 D-------VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421
Query: 519 NILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N L+ A C D +V A ++N++ + G SP I++ +ID G E A+++L+ MR
Sbjct: 422 NTLLTALCKDG-KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ PD++ Y+T ++ R ++ +A +F +M+ I+P+ VTY
Sbjct: 481 RKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 163/359 (45%), Gaps = 37/359 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+L+ C +G A E+ LE V DV TY+TI++
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEV------LERMSVAP-DVVTYNTILRSLC 219
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + L P+ IT++ LI A N V QAM L +EM + GC+P+
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279
Query: 435 CCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTDRISN 481
N+L+ + + D A + + + ++ + G D +S+
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER-LLSD 338
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K + P + +YN L+ C +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ + M + G P+ +++ L+ A G V+ A++IL + G SP ++ Y T
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + A L EEM+ ++P+++TY TLLR R G +V + + ++ DM
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG---KVDEAIKIFHDM 514
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 46/335 (13%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+K G D+ +YN+L+ C G E + ++ + G K +V T++
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-KPNVITHNI 318
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A ++ DML G +P+ +T++ LIN L+ +A+ + E+M + G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGED--YDGNT 476
C PNS N LL + + DRA T + AL +D D
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI----LMKACCTDYYRV 532
+ ++ + K P TYN L K T+Y
Sbjct: 439 EILNQLSSK------------------------GCSPVLITYNTVIDGLTKVGKTEY--A 472
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ EMR GL P+ I+++ L+ G G V+ A++I M + P V Y +
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++ +A M +P TY L+
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 57/273 (20%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK E M+ G P+ I +SLI +G ++A + E + +G P+ N+L+
Sbjct: 125 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIG 184
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ + D+A +
Sbjct: 185 GYCKSGEIDKALEVL--------------------------------------------- 199
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM-RTVGLS--PNHISWTILIDAC 558
+R S P TYN ++++ C D ++K M + R + P+ I++TILI+A
Sbjct: 200 -----ERMSVAPDVVTYNTILRSLC-DSGKLKEAMEVLDRQLQRECYPDVITYTILIEAT 253
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G PDVV Y I + RL +A M Y +PN+
Sbjct: 254 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNV 313
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+T+ +LR+ G + ++ L+ DM + G
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLS---DMLRKG 343
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G K R + S R DA +
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + N +N L++
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINF--LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHG 392
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K +E + M G D+ +YN LL A C G A EI + L +KG
Sbjct: 393 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI---LNQLSSKGC 449
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+++ E+M G+ P+ IT+S+L+ G V++A+
Sbjct: 450 SPV-LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+F +M +P++ N ++ +A Q RA
Sbjct: 509 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 543
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+KR L A+ + KH PN ++ G C + RAI E + S+ +
Sbjct: 360 RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH--GFCQEKKMDRAIEYLEIMVSRGCYPD 417
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L+ D K +E+ + G + +YN ++ G T A E+
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E++ KG LK D+ TYST+++ A+K+ DM + P+ +T+++++
Sbjct: 478 EMRR---KG-LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A +A+ M++ GC+P IL++
Sbjct: 534 CKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E L+ L+ M G PDV+A T+ I+ RS + K+A + E +++ P+++T
Sbjct: 119 NGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVIT 178
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
Y L+ + G E+ + L V + M A
Sbjct: 179 YNVLIGGYCKSG---EIDKALEVLERMSVA 205
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 189/436 (43%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + ++ F G+K D + Y SP++ + + +D G+ K RA+
Sbjct: 518 VVYTSLIQNFFKCGRKED---GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E++++Q + ++ ++ L++ V A + T +++ M++ G+ D+ +YN ++ C
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A ++ E+K KG L+ V TY ++V A A + E+ S GV
Sbjct: 635 SGKVDKAYQLLEEMK---TKG-LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PNS N LL A V+A + D A F
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ NM K P
Sbjct: 751 Q-----------------------NM------------------------KNLKCSPNAM 763
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+I++ C + + EM+ GL PN+I++T +I +GNV A +
Sbjct: 764 TYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRF 823
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PD Y I+ + + A+ +FEE + + N T + LL A + L
Sbjct: 824 KASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCL 883
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV ++M K+
Sbjct: 884 EQAAIVGAVLREMAKS 899
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 165/410 (40%), Gaps = 56/410 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+G A + K+ P++ I+ G G ++ I++++R Q+ N
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPN 411
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N L+++ A +L+ L+V M++ G+ ++ + NI++ C A A I+
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H V D T+ +++ A + E ML + PN + ++SLI
Sbjct: 472 GLDH----KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G E +++EM+ GC P+ N + +A + ++ LF
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF------------ 575
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
E Q + P +Y+IL+
Sbjct: 576 --------------EEIKAQGLV---------------------PDVRSYSILIHGLVKA 600
Query: 529 YY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L EM+ GL + +++ +ID SG V+ A Q+L+ M+ G+ P VV Y
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + + RL +A+ LFEE K + N+V Y +L+ + G + E
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 203/476 (42%), Gaps = 43/476 (9%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
+ DE + +++ K + I Y CI L C G+K + ALR +D ++
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCI------LTC-----LGRKGKVEEALRIHDEMRQ 406
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
++PN+ +ID+ G+ + + + ++ + NI N +++ A L
Sbjct: 407 D-AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ + D ++ L+ G A +Y K L++ + +V Y+
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE--KMLDSDQIP--NVVVYT 521
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++++ F + K+ ++M+ G +P+ + +S ++ AG VE+ LFEE+
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDR- 478
G P+ + +IL+ V+A ++LF L+ V G G D+
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 479 ---ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF----KPTTTTYNILMKACCTDY 529
+ M+ K Q T V + + D+ + K N+++ + D
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Query: 530 Y----RVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ R+ ++ E+ GL+PN +W L+DA + ++ A + M+ SP+
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPN 761
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ Y+ I ++ +AF ++EM+ ++PN +TY T++ ++ G++ E +
Sbjct: 762 AMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 151/359 (42%), Gaps = 40/359 (11%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V +H LK V + M+K ++Y L+ A A ++ +++ + +
Sbjct: 179 VKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEA-- 236
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V ++T+V+VFA AL + ++M S T + + ++ I+ G V+ A
Sbjct: 237 --NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT--------QVALGED 471
F EM G P+ L+ +A + D A LF L+++ + +G
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G D ++ + KR P+ YN ++ C +
Sbjct: 355 SAGKFDEAYSLLER--------------------QKRKGCIPSVIAYNCIL-TCLGRKGK 393
Query: 532 VKALM---NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
V+ + +EMR +PN ++ ILID +G +E AL++ M+E G+ P+++
Sbjct: 394 VEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++++L +A S+F + H P+ T+ +L+ R G V ++Y+ M
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG---RVDDAYSLYEKM 508
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 171/429 (39%), Gaps = 59/429 (13%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K L A + +K P T+I ++ ++
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+++F +L+ V A + + L + M+ AD+ YN+ + G +A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + E+K A+G++ DV TY+T++ V A+ A+++ E++ P ++++
Sbjct: 294 KFFHEMK---AQGLVPDDV-TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I +AG ++A L E + GC P +++ C+ C L R K
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIP-----SVIAYNCILTC-------LGRK---GKV 394
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ AL RI + +D P TTYNIL+
Sbjct: 395 EEAL---------RIHDEMRQDAA------------------------PNLTTYNILIDM 421
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C AL + M+ GL PN ++ I+ID + ++ A I + SPD
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ + I R R+ A+SL+E+M PN+V Y +L++ + G + +
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK--- 538
Query: 643 VYQDMWKAG 651
+Y++M G
Sbjct: 539 IYKEMVHRG 547
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 528 DYYRVKALMNEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
DY ++ ++ EM G NH+S L+ + S ++ A ++++MR+ P AY
Sbjct: 150 DY--LEQILEEMSVAGFGLSNHVSVE-LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAY 206
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
TT I + R +LF +M+ + N+ + TL+R +R G +
Sbjct: 207 TTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 197/407 (48%), Gaps = 21/407 (5%)
Query: 240 ALRAYDASKKHLSSP-NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++HL + C TII + G G +R I+E + V +++ + +L+
Sbjct: 13 ALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALL 72
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A LK +++ M++ G ++ +YN L+ AC ++ G + ++
Sbjct: 73 SGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINAC--TKRAYRLPDLVGLFEEMKQA 130
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV D+ TY+ +V + A ++ ++M + PN I+++++IN+ +G +++
Sbjct: 131 GVQPNDI-TYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDE 189
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ LFEEM + G PNS N LL+A ++++A LF + + + + Y NT
Sbjct: 190 AVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVG---MEDEGCIPDLYTYNT 246
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
+ +M + F+ +R P TYN ++ A + R +
Sbjct: 247 --VIDMCGRGGLFAEAEGVFLEM-------QRKGCTPDRVTYNTMLDAYSKWSRRGRARD 297
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ M+ G +P+ ++ IL+DA G +G+ A+QI ++ G SP++V+++ I +
Sbjct: 298 LLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYG 357
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
R ++A + EM+ PN Y L+ + S +G +++V C+
Sbjct: 358 RLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHG-MYKVLCCI 403
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 51/286 (17%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ + +A ++ E M AGV P+ +++L++ A GL+++A LFE M +
Sbjct: 35 TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN N L+ AC + RA+RL D + E +
Sbjct: 95 GCSPNVLTYNTLINACTK-----RAYRL--------------------PDLVGLFEEMKQ 129
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTDYYRVKA-LMNEMRTVGLS 545
+ +P TYN ++ AC C + + ++ EM+ V
Sbjct: 130 AGV---------------------QPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCL 168
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN IS+T +I++ G SG ++ A+++ + M+E G SP+ Y + +K R R ++A L
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F M+ P+L TY T++ R G E + V+ +M + G
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAE---GVFLEMQRKG 271
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 137/325 (42%), Gaps = 38/325 (11%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G LA+EI+ + +K + V Y+ ++ +A + A + E M G +PN
Sbjct: 44 GKLGLAREIFEGM----SKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPN 99
Query: 398 TITWSSLINACAN-AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+++LINAC A + + LFEEM QAG +PN N ++ ACV FD A ++
Sbjct: 100 VLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQIL 159
Query: 457 RSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ +S T + G D + + K+
Sbjct: 160 KEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKE-------------------- 199
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P + TYN L+KA + Y + L M G P+ ++ +ID CG G
Sbjct: 200 LGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAE 259
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M+ G +PD V Y T + + R +A L + MK P+L TY LL
Sbjct: 260 AEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLD 319
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
A + GS E Q ++ ++ AG
Sbjct: 320 AAGKAGSASEAMQ---IFHELKAAG 341
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 69/434 (15%)
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFR------IVQLCVNKPDVNLA------IRYACIV 217
E+E+ + L+ FR + L+ E + I+ + + + LA + A +
Sbjct: 3 ELEIRGARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVA 62
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR- 276
P + + + K+ L A ++A K+ SPN+ T+I+ C +
Sbjct: 63 PSVHA-YTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLV 121
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++E+++ V N +N ++N V ++ K M+ + + ++ SY ++ +
Sbjct: 122 GLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSL 181
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G A E++ E+K L + +TY++++K +A ++ A+ + M G
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSP----NSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGC 237
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ T++++I+ C GL +A +F EM + GC P+ N +L A + + R
Sbjct: 238 IPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDA------YSKWSR 291
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R+ L KT KR P
Sbjct: 292 RGRARDLLKTM-----------------------------------------KRAGCTPD 310
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNIL+ A +A+ +E++ G SPN +S++ LI+ G G E A +
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370
Query: 573 IMREDGMSPDVVAY 586
MR G P+ AY
Sbjct: 371 EMRATGCVPNATAY 384
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 55/404 (13%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA---GNTVL--AQE 345
+FNSL++ + D + ++ K M + G YNIL+ C + G VL A++
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173
Query: 346 IYGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKVF 373
YGE ++ + +KG + D TYS ++
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP-DTSTYSKVIGYL 232
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A + A ++ ++M G+ P+ +++LI++ AG +EQA + F+EM + GC PN
Sbjct: 233 CNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNV 292
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVAL--GEDYDGNTDRISNMEH 484
L+ A +++ + +A ++ LSK T AL G G ++ S +
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYE-MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTV 542
K+ P+ + H+ D S +P TY L+ C Y + L+ M
Sbjct: 352 IMKKENVEIPDV--DMHFRVVDGA-SNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PNH+ + LID C +G ++ A ++ M E G P+V Y++ I + KRL A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +M PN+V Y ++ + G E + + + ++
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 55/413 (13%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
+CGI G + K+ + ++ S+ + ++ ++ NA ++ ++++ M++ G+
Sbjct: 197 LCGI-GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y L+ + C AG A+ + E +E G +V TY+ ++ + ++ A
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDE---MERDGCAP-NVVTYTALIHAYLKSRKVSKA 311
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---------------- 426
+V E MLS G TPN +T+++LI+ AG +E+A +++ M +
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVD 371
Query: 427 -AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNM 482
A EPN L+ +A Q A L +S ++ + V DG
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD 431
Query: 483 EHKDKQSITNTPNFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
E ++ + + PN + YSS DKR S P Y ++
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + Y++ +M E G +PN +++T +ID G SG VE L++L+ M
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEK---GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSK 548
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G +P+ V Y I C + L +A L EEMK ++ Y ++ +R
Sbjct: 549 GCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR 601
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+ ++ +A ++ A+ M ++ PN +T+ L+ C N + + +
Sbjct: 41 DTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRIL 100
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------------VALG 469
M+ GC P+ + N L+ A + + A++L + Q +
Sbjct: 101 SMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSS 160
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------SFDKRFS---------FKP 513
E+ + ++ + + N V S++S F+K ++ F P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+TY+ ++ C KA L EM+ G++P+ +T LID+ +G +E A
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M DG +P+VV YT I ++S+++ +A ++E M PN+VTY L+ +
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340
Query: 632 GSLHEVQQCLAVYQDMWK 649
G + + Q +Y+ M K
Sbjct: 341 GKIEKASQ---IYKIMKK 355
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 180/456 (39%), Gaps = 85/456 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + K R + A Y+ +PN+ +ID G+C G K+ IY
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALID--GLCKAGKIEKASQIY 350
Query: 280 EDLRSQNVTL-----------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ ++ +NV + N++ + +L++ A+ +K ++ K+M G
Sbjct: 351 KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ Y+ L+ CC AG AQE++ + LE +V+TYS+++ K
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTM--LECG--YDPNVYTYSSLIDRLFKDKRLD 466
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ALKV ML PN + ++ +I+ G ++A L M + GC PN ++
Sbjct: 467 LALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMI 526
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
F ++ R+ + L + + G PNFV
Sbjct: 527 DG------FGKSGRVEKCLELLQQMSSKG----------------------CAPNFV--- 555
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS-WTILIDA 557
TY +L+ CC+ +A L+ EM+ P H++ + +I+
Sbjct: 556 ----------------TYRVLINHCCSTGLLDEAHKLLEEMKQT-YWPRHVAGYRKVIE- 597
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI--Q 615
G + +L + + E+ P Y I +++ RL+ A L EE+ +
Sbjct: 598 -GFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSA 656
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
N +ITL+ S H+ + +Y DM G
Sbjct: 657 ANQNIHITLIENLSL---AHKADKAFELYADMISRG 689
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
L +G++E + +++++ + + ++D FR+V N+P+V Y +V
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV---FTYGALVDG----L 389
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
C + + RDL+ ++ PN + +ID C G +++ ++ +
Sbjct: 390 CK-AYQVKEARDLLKSMSVEGCE------PNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
N+Y ++SL++ D L L+V M + ++ Y ++ C G T
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT-- 500
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E Y + +E KG +V TY+ ++ F + + L++ + M S G PN +T+
Sbjct: 501 -DEAYKLMVMMEEKGC-NPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558
Query: 403 SLINACANAGLVEQAMHLFEEMLQ 426
LIN C + GL+++A L EEM Q
Sbjct: 559 VLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGS 561
S ++ F P T Y ++ C +A+ + MR PN +++ IL+ C
Sbjct: 31 SLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNK 90
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ +IL +M +G P + + + RS A+ L ++M QP V Y
Sbjct: 91 EKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVY 150
Query: 622 ITLL 625
L+
Sbjct: 151 NILI 154
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 204/473 (43%), Gaps = 68/473 (14%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+I+ N+ + EF K ++S + +K P++ ++D GD + A+
Sbjct: 99 NIMVHNYCKALEFDKVDAVISEM------EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S+ + I +NS++ + EV+K M GV D+ S+ IL+ C
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A +IY E++H +G+ K D+ ++S ++ +FA A+ +M G+ P
Sbjct: 213 VGEIEEALKIYKEMRH---RGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-------------- 442
+ + ++ +I AGL+ A+ + +EM+ GC P+ N LL
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 443 ----------------------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
C+E + D+A +LF + + + + Y+ D +
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEG-KLDKALQLFDTMLNQRLRPDI-VTYNTLIDGMC 386
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
DK N + R F P TY+IL+ + C A ++E
Sbjct: 387 RQGDLDKA----------NDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLDE 435
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ PN +++ +I SGNV + L+ M + +SPD++ Y T I ++ +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ AF L M+ ++QP++VTY L+ S +G+ VQ+ +++ M G
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN---VQEAGWIFEKMCAKG 545
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 29/380 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
Y + S N +N Y N +++ L+F V M+K V D+ ++N+++ A
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +KG LK + TY++++K + W A +V ++M GV P
Sbjct: 143 AGDAEAAMAL---VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---F 453
+ +++ LI G +E+A+ +++EM G +P+ + L+ + D A
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R R + L V G + + + V + P
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFC----------RAGLMSDALRVRDEMVGC-----GCLP 303
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEMR G+ P+ ++T LI G ++ ALQ+
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + PD+V Y T I R L +A L+++M +I PN VTY L+ +
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G +V+ +M G
Sbjct: 424 G---QVEDAFGFLDEMINKG 440
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 18/247 (7%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP F + + + L AL+ +D P++ T+ID G+C GD K
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID--GMCRQGDLDK 393
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNIL 330
+ +++D+ S+ + N ++ L +++H K +E M G++ ++ +YN +
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSIL--IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKED 388
+K C +GN Q K L+ V K+ D+ TY+T++ + A K+
Sbjct: 452 IKGYCRSGNVSKGQ------KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M V P+ +T++ LIN + G V++A +FE+M G EP+ ++ V A
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565
Query: 449 FDRAFRL 455
AF+L
Sbjct: 566 SKEAFQL 572
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 155/353 (43%), Gaps = 29/353 (8%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R G D V K++++ GVAP D F +L R+ GE+E +++ +E
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAP----DVRSFTILIGGFCRV---GEIEE---ALKIYKEM 226
Query: 185 R-LPVKELDEEFR-IVQLCVNKPDVNLAIRY----AC--IVPRADILFCNFVREFGKKRD 236
R +K F ++ L + ++ A+ Y C +VP +++ + F +
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCRAGL 285
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVF 294
+ ALR D P++ T+++ G+C + + + + ++R + V ++ F
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLN--GLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ + K L+++ M + D+ +YN L+ C G+ A +++ ++
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
E + + TYS ++ + + A ++M++ G+ PN +T++S+I +G
Sbjct: 404 RE----IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 459
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
V + ++M+ P+ N L+ ++ + AF+L K Q
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 512
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 187/386 (48%), Gaps = 33/386 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV-YKNMQKLGVM 321
G+C G ++R + + + NV L FN+L+N V+ L V +++M +G
Sbjct: 331 GLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++ F +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILIDRFCKEGRLEE 442
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++M G+ N + ++ LI+A V+ A+++F +M GC+P+ N L+
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPN 499
+ +F+ A L++ L E NT + + H + ++ V
Sbjct: 503 GLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRGAMQEALKLVN- 553
Query: 500 SHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
D F P TYN L+KA C + + AL +M + GL+PN+IS ILI+
Sbjct: 554 ------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +LF++++ I P
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLA 642
+ +TY TL+ + G + L+
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLS 693
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 160/387 (41%), Gaps = 46/387 (11%)
Query: 276 RAIYE---DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
R +Y RS NV L++ L+ N K V+ M G+ + ++ +++K
Sbjct: 173 RGVYSCEPTFRSYNVVLDV-----LLAGNCP--KVVPNVFYEMLSKGISPTVYTFGVVMK 225
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A CL A + +K + G + + Y T++ LK+ E+ML
Sbjct: 226 ALCLVNEVDSACAL---LKDMTRHGCVP-NAIVYQTLIHALXKVGRVNEVLKLLEEMLLM 281
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ T++ I+ + +A L + ML G PNS +L+ + D A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 453 FRLFRSWTLSKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
L + V L G G D + H+ S+ P+
Sbjct: 342 RMLLNK--VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF--------- 390
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
TYN L+ C Y V A LMNEM+ G PN I++TILID G +
Sbjct: 391 ----------TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 440
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A +L M G++ + V Y I + ++++ A ++F +M +P++ T+ +L
Sbjct: 441 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + +++ ++ L +YQDM G
Sbjct: 501 IFGLCK---VNKFEEALGLYQDMLLEG 524
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK---FEEALGLY 517
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 518 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R L
Sbjct: 577 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM----IHRGLTP 632
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD 528
D I+ + + + FDK P TYN L+ C +
Sbjct: 633 DIVTYNSLINGLCKTGRAQ----------EALNLFDKLQVEGICPDAITYNTLISWHCKE 682
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILI 555
+ L++ G PN ++W IL+
Sbjct: 683 GMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 151/385 (39%), Gaps = 68/385 (17%)
Query: 326 SYNILLKACCLAGN--TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN++L LAGN V+ Y + +KG+ V+T+ ++K A
Sbjct: 184 SYNVVLDVL-LAGNCPKVVPNVFY----EMLSKGI-SPTVYTFGVVMKALCLVNEVDSAC 237
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +DM G PN I + +LI+A G V + + L EEML GC P+ N +
Sbjct: 238 ALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 297
Query: 444 VEACQFDRAFRL-----FRSWTLSKTQVAL---GEDYDGNTDRISNMEHKDKQSITNTPN 495
+ + A +L R +T + + G G D + +K N
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFN 357
Query: 496 FVPNSHYSS--FDK----------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+ N + S D+ P TYN L+ C Y V A LMNEM+
Sbjct: 358 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++TILID G +E A +L M G++ + V Y I + ++++
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 477
Query: 602 AFSLFEEMKHYQIQP-----------------------------------NLVTYITLLR 626
A ++F +M +P N +TY TL+
Sbjct: 478 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 537
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
A R G++ Q+ L + DM G
Sbjct: 538 AFLRRGAM---QEALKLVNDMLFRG 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 28/337 (8%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y +L+ C G A+ + +V + +V ++T++ +
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP--------NVVLFNTLINGYVSRGR 368
Query: 379 WQMALKV-KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A V E MLS G P+ T+++LI G + A L EM GCEPN
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNF 496
IL+ + + + A R+ + L + G IS + +K Q N
Sbjct: 429 ILIDRFCKEGRLEEA----RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM--- 481
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ + KP T+N L+ C + L +M G+ N I++ L
Sbjct: 482 -----FGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G ++ AL+++ M G D + Y IK R+ +++ +LFE+M +
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN ++ L+ R G+ +Q L +DM G
Sbjct: 596 NPNNISCNILINGLCRTGN---IQHALEFLRDMIHRG 629
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ K A++ED+ S+ + N N L+N +++ LE ++M G+ D+ +Y
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G AQE L+ +G+ D TY+T++ + A +
Sbjct: 638 NSLINGLCKTGR---AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLS 693
Query: 388 DMLSAGVTPNTITWSSLIN 406
+ +G PN +TW L++
Sbjct: 694 RGVDSGFIPNEVTWYILVS 712
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V +F + M+ G D+ ++ ++++ C AG
Sbjct: 231 EMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ ++K + K D TY T++ D+ Q ++V M++ G N
Sbjct: 291 RLSDAKAVFWKMKASDQKP----DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNI 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++++++A G V++A+ +F+EM + G P N L+ ++A FDRA LF
Sbjct: 347 VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
A G +G T + N K QS+ + H K P
Sbjct: 407 MN------ACGPSPNGYTHVLFINYYGKSGQSLKAIQRY---EHM----KSKGIVPDVAA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + E++ +G+SP+ I++T++I C + + A+ M
Sbjct: 454 ANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G PDV+A + I + + +A+ LF ++K +I+P TY TLL R G +
Sbjct: 514 ESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVK 573
Query: 636 EVQQCL 641
EV Q L
Sbjct: 574 EVMQLL 579
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 198/434 (45%), Gaps = 58/434 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A + N+ ++D G ++ A++++
Sbjct: 312 VTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + ++ Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y +H+++KG++ DV + ++ A + MA +V ++ + GV+P+TI
Sbjct: 432 SLKAIQRY---EHMKSKGIVP-DVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM+ F +M+++GC P+ N L+ + + + A++LF
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLF--- 544
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
HK K+ +PT TYN
Sbjct: 545 ------------------------HKLKE--------------------MKIEPTNGTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM PN I++ ++D +G V A+ +L M E
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEK 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G +PD+ +Y T + ++ +RL++AF +F +MK + P+ T T+L + + G + E
Sbjct: 621 GCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEA 679
Query: 638 QQCLAVYQDMWKAG 651
+ Y + KAG
Sbjct: 680 LHTVKEY--ILKAG 691
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 129/597 (21%), Positives = 254/597 (42%), Gaps = 84/597 (14%)
Query: 67 LSSRNDYYADMASKLAKDGRLEEFAMIVESVV--VSEGNVSKFASMLSLEMVASGIVKSI 124
+ N Y + S L ++G+++E ++E + + N+ + ++L
Sbjct: 552 IEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLS--------- 602
Query: 125 REGRIDCVVGVLKKLNELGVAP-LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
+ G ++C + +L + E G AP L ++ + L+K E RL ++ MF + ++L
Sbjct: 603 KNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEE--RLEEA--FRMFCQMKKILAP 658
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRY----ACIVPRADILFCNFVREFGKKRDLVS 239
+ + F V+ + K ++ Y C V ++ F + + KK +
Sbjct: 659 DYATLCTILPSF--VKNGLMKEALHTVKEYILKAGCNVDKSS--FHSLMEGILKKAGVEK 714
Query: 240 ALR-AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
++ A + + + + + ++C I +C +++ ++ + V+L +NSL+
Sbjct: 715 SIEFAENIASRGILLNDFFLCPLIRHLCK-HKKALEAHQLFNKFKGLGVSLKTGSYNSLI 773
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V+ + + +++ M++LG D +YN++L A G ++ +E+ K + K
Sbjct: 774 RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA---MGKSMRVEEMLKVQKEMHRK 830
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G V TY+TI+ +K + A+ + +++S G +P T+ L++ +G +
Sbjct: 831 GYESTYV-TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVD 889
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +LF EML+ GCEPN NILL G GNT
Sbjct: 890 AENLFNEMLEYGCEPNCTIYNILLN---------------------------GHRIAGNT 922
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL- 535
+ + + K + N P +Y IL+ CT L
Sbjct: 923 ENVCQLFEKMVEQGIN--------------------PDIKSYTILIDTLCTAGRLNDGLC 962
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ +GL P+ I + +LID G S +E A+ + M++ G+ P++ Y + I
Sbjct: 963 YFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLG 1022
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + +A ++EE+ +P++ TY L+R S GS A Y M G
Sbjct: 1023 KAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGS---TDNAYAAYGQMIVGG 1076
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 98/203 (48%), Gaps = 6/203 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +V A ++ ++ PN I +++ I G+ ++E + Q + +I
Sbjct: 883 KSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIK 942
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ L++ A L L ++ + +LG+ D+ YN+L+ + A ++ E+
Sbjct: 943 SYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K KG++ +++TY++++ A A ++ E++L G P+ T+++LI +
Sbjct: 1003 KK---KGIIP-NLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSV 1058
Query: 411 AGLVEQAMHLFEEMLQAGCEPNS 433
+G + A + +M+ GC+PNS
Sbjct: 1059 SGSTDNAYAAYGQMIVGGCQPNS 1081
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 21/277 (7%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ KG +L+V Y+ ++++ A+ W + ++M+S G+TP T+ +LI+ + G
Sbjct: 186 LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGG 245
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L E+A+H + M + G EP+ +++Q +A +F +A + F++W+L KT L ++
Sbjct: 246 LTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKT---LKDEG 302
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
+ ++ Q ++ N+ ++ K + + T+ +++
Sbjct: 303 KTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-------- 354
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G+ PN +++ +I CG G +E A +++ M E PD Y I +
Sbjct: 355 ----------GIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 404
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +A S F++MK +++P+LV+Y TLL A S
Sbjct: 405 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFS 441
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 22/361 (6%)
Query: 280 EDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E +V L+ Y +N+L++ A L+ + + M + G++ + ++N ++ C
Sbjct: 314 ESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNH 373
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + +++ L D TY+ ++ + A A + M A + P+
Sbjct: 374 GQLEEAASLMQKMEELRCPP----DTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPD 429
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++ +L+ A + LV +A L EM + G E + + L + +EA +++ FR
Sbjct: 430 LVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFR 489
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ L + E Y N D H + + + + S K +
Sbjct: 490 RFHLEGNMSS--ECYSANIDAYGERGH------------ILEAEKAFLCCKESRKLSVLE 535
Query: 518 YNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+++KA Y + L++ M G+ P+ S+ LI + A L M+
Sbjct: 536 FNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ 595
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E + D + Y I ++ +L+ A LF+EM Y +QP++V Y L+ A + G++
Sbjct: 596 ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVR 655
Query: 636 E 636
E
Sbjct: 656 E 656
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 181/438 (41%), Gaps = 32/438 (7%)
Query: 219 RADILFCNF-----VREFGKKRDLVSALRAYDASKKH--LSSPNMYICRTIIDVCGICGD 271
+A+ F N+ +++ GK + + AS+ H LSS Y T+ID G G
Sbjct: 284 KAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSS---YTYNTLIDTYGKAGQ 340
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++ + + + + N FN+++++ N L+ + + M++L D +YNI
Sbjct: 341 LREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNI 400
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ N A + ++K EA+ L+ D+ +Y T++ F+ A + +M
Sbjct: 401 LISLHAKHNNIDRAASYFKKMK--EAR--LEPDLVSYRTLLYAFSIRHLVGEAEILVSEM 456
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ + T S+L AG+++++ F G +S+C + + A E
Sbjct: 457 DERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG-NMSSECYSANIDAYGERGHI 515
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F S+ L + ISN K Q I + N
Sbjct: 516 LEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENH------------- 562
Query: 510 SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P +YN L++ A ++ K + +M+ L + I + +I + G +E A
Sbjct: 563 GVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMA 622
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ K M + PDVV Y I +++A + +++ + N V Y +L++
Sbjct: 623 EGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKL 682
Query: 628 RSRYGSLHEVQQCLAVYQ 645
++ G L E Q+ + Q
Sbjct: 683 YTKVGYLEEAQEAYKMLQ 700
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 62/321 (19%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ +M+ GV+ D SYN L++ LA + + + +K E + L D Y +
Sbjct: 554 QLIDSMENHGVLPDKFSYNSLIQ--ILASADLPHKAKFYLMKMQETQ--LVSDCIPYCAV 609
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F +MA + ++M+ V P+ + + LINA A+ G V +A++ + AG
Sbjct: 610 ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGL 669
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ N L++ + + A ++ S+ +G D
Sbjct: 670 PMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASE----VGPDV----------------- 708
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS---- 545
YSS C D Y ++++ + + S
Sbjct: 709 ------------YSS-------------------NCMIDLYSERSMVKQAEEIFESLKRK 737
Query: 546 --PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
N S+ +++ G ++ A QI++ MRE G+ D+++Y + R K A
Sbjct: 738 GDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAV 797
Query: 604 SLFEEMKHYQIQPNLVTYITL 624
F+EM IQP+ T+ +L
Sbjct: 798 GTFKEMIEAAIQPDDCTFKSL 818
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 184/436 (42%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D G+ K R I
Sbjct: 494 VVYTSLIRNFFIHGRKED---GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED+RS ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 610
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A EI E+K + ++ V TY IV A A + E+ S G+
Sbjct: 611 SGKVHKAYEILEEMK----EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EEM++ G PN N LL A V+A + + A F
Sbjct: 667 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 726
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P T
Sbjct: 727 QSM-----------------------------------------------KEMKCPPNTY 739
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+IL+ C Y + +M+ GL PN +++T +I GN+ A + +
Sbjct: 740 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 799
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD ++ I+ + R +A+ +FEE + + N+ + I+LL A ++ L
Sbjct: 800 KANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECL 859
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV +++ K+
Sbjct: 860 EQAAIVGAVLREIAKS 875
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 28/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 375 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 429
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 430 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 489
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
N L++ + + ++F+ K + L Y + +E K +
Sbjct: 490 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE-KGR 548
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ + + F P +Y+IL+ + + M+ G +
Sbjct: 549 MIFEDI-------------RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++D SG V A +IL+ M+E + P V Y + + RL +A+ L
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FEE K I+ N+V Y +L+ +G + + + + ++M K G
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDG---FGKVGRIDEAYLILEEMMKKG 698
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 182/441 (41%), Gaps = 32/441 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF VR ++ + AL D K P++ + ID G G+ + + +L
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + + S++ V A L E++ M+ + +YN ++ AG
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ L +G + V ++++I+ + AL + E ++ PN+ T
Sbjct: 336 ---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSST 390
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ G VE+A + +EM A PN NI++ +A + + A+++F S +
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450
Query: 461 --------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF------- 505
++ + G G D + K + N V S +F
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510
Query: 506 DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
D F KP T N M + + + + ++R+ G P+ S++ILI
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+G I M++ G + D AY + +S ++ +A+ + EEMK +Q
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630
Query: 616 PNLVTYITLLRARSRYGSLHE 636
P + TY ++ ++ L E
Sbjct: 631 PTVATYGAIVDGLAKIDRLDE 651
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 53/338 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + MQ++G + + L++A G A + EVK L+ D+ Y+
Sbjct: 198 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK----GSCLEPDIVLYN 253
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ F A MA K ++ + G+ P+ ++++S+I AG + +A LF +M
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P + N ++ A +F+ A++L +R+ +++
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLL--------------------ERL-----RER 348
Query: 488 QSITNTPNFVPNSHYSSFDKRFSF--------------KPTTTTYNILMKACC-----TD 528
I + +F NS + K+ +P ++TYNI++ C +
Sbjct: 349 GCIPSVVSF--NSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 406
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
YR+ ++EM L PN ++ I++D + +E A +I + + G +PD V Y +
Sbjct: 407 AYRI---LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
I + ++ +A+ LFE+M N V Y +L+R
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 501
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 139/353 (39%), Gaps = 60/353 (16%)
Query: 294 FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC-LAGNTVLAQEIYGEVKH 352
+++++ HDL +V + M LG Y + +AC LA V A+ + V
Sbjct: 114 YHAVLPFLHHDLAALEKVLEEMAVLG-------YGLPNQACAHLAAALVRARRLDDAVLA 166
Query: 353 LEAKGVLKL-DVFT-YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ LK F+ Y+ ++ A+A+ + AL++ M G +++L+ A A
Sbjct: 167 VAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAR 226
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V A+ L +E+ + EP+ +L C++ F +A
Sbjct: 227 EGQVADALALVDEVKGSCLEPDI----VLYNVCIDC--FGKA------------------ 262
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--D 528
GN D H+ K KP +Y ++ C
Sbjct: 263 ---GNVDMAWKFFHELKAQ--------------------GLKPDDVSYTSMIWVLCKAGR 299
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L +M P ++ +I G +G E A ++L+ +RE G P VV++ +
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + +++ +A SLFE MK +PN TY ++ G + E + L
Sbjct: 360 ILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRIL 411
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R F+P + Y +L+ A +AL + +M+ VG +T L+ A G V
Sbjct: 171 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 230
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL ++ ++ + PD+V Y I ++ + A+ F E+K ++P+ V+Y ++
Sbjct: 231 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290
Query: 625 LRARSRYGSLHEVQQCLA 642
+ + G L E ++ A
Sbjct: 291 IWVLCKAGRLGEAEELFA 308
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+E++ GL P+ +S+T +I +G + A ++ M + P AY T I
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 330
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ R + A+ L E ++ P++V++ ++L G +V + L++++ M K
Sbjct: 331 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALSLFEVMKK 382
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 171/386 (44%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ AI +++ S + N ++ L++ ++ HD +++ M K G+ D A Y
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ FA A + AL + +
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQ----KERMQPSNRAFRPIIEGFAVAGDMKRALNILD 573
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + +M AG PN I+++
Sbjct: 574 LMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANG 633
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ G
Sbjct: 634 DIGKAFEYF-------TKIKEG-------------------------------------- 648
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM T ++ N + ILID G+V
Sbjct: 649 --GLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVW 706
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PNL TY TL+
Sbjct: 707 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLI 766
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ SL + + L +++M AG
Sbjct: 767 KGWAK-ASLPD--RALKSFEEMKLAG 789
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+R + +K P+ R II+ + GD ++ I + +R
Sbjct: 520 LIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSG 579
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + + ++ + V M G+ + +Y I+++ G+ A
Sbjct: 580 CAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAF 639
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA------------ 392
E + ++K +G LKLDV+ Y T+++ + Q AL V +M +
Sbjct: 640 EYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNIL 695
Query: 393 -----------------------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
GV PN T++S INAC AG +++A + EEM G
Sbjct: 696 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGL 755
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ +A DRA + F L+
Sbjct: 756 KPNLKTYTTLIKGWAKASLPDRALKSFEEMKLA 788
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 616 TPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 675
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A ++ +K ++ GV ++ TY++ +
Sbjct: 676 VTREMSTQKIARNTFVYNILIDGWARRGDVWEAADL---MKQMKEDGVPP-NIHTYTSYI 731
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M G+ PN T+++LI A A L ++A+ FEEM AG +
Sbjct: 732 NACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLK 791
Query: 431 PNSQCCNILL 440
P+ + L+
Sbjct: 792 PDEAAYHCLV 801
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ +Q +
Sbjct: 626 MRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKI 685
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +V+N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ AQ+
Sbjct: 686 ARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQK 745
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + K LK TY+T++K +A A ALK E+M AG+ P+ + L+
Sbjct: 746 VIEEMADVGLKPNLK----TYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLV 801
Query: 406 NA 407
+
Sbjct: 802 TS 803
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M + G+ PN ++SL++A A A + + EEM G E +I++ +
Sbjct: 293 ENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKI 352
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS--ITNTPNFVPNSHYSS 504
A LF+ + + LG D N SN+ H QS + V
Sbjct: 353 NDAQSADNLFK-----EAKAKLG---DLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 404
Query: 505 FDKRF-SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D ++ Y I+ K C + R+K +P+ IS+ LI+
Sbjct: 405 IDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECC-------FTPSIISYGCLINLYIKI 457
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V A+ I K M G+ + Y+ I + AFS+FEEM +QP+ Y
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQ 645
L+ A + G++ + L Q
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQ 541
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ G L
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 386 QSGNMDRAEE 395
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 187/386 (48%), Gaps = 33/386 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV-YKNMQKLGVM 321
G+C G ++R + + + NV L FN+L+N V+ L V +++M +G
Sbjct: 349 GLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCG 404
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++ F +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILIDRFCKEGRLEE 460
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++M G+ N + ++ LI+A V+ A+++F +M GC+P+ N L+
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPN 499
+ +F+ A L++ L E NT + + H + ++ V
Sbjct: 521 GLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRGAMQEALKLVN- 571
Query: 500 SHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
D F P TYN L+KA C + + AL +M + GL+PN+IS ILI+
Sbjct: 572 ------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +LF++++ I P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLA 642
+ +TY TL+ + G + L+
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLS 711
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 326 SYNILLKACCLAGN--TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN++L LAGN V+ Y + +KG+ V+T+ ++K A
Sbjct: 202 SYNVVLDVL-LAGNCPKVVPNVFY----EMLSKGI-SPTVYTFGVVMKALCLVNEVDSAC 255
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +DM G PN I + +LI+A + G V + + L EEML GC P+ N +
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315
Query: 444 VEACQFDRAFRL-----FRSWTLSKTQVAL---GEDYDGNTDRISNMEHKDKQSITNTPN 495
+ + A +L R +T + + G G D + +K N
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFN 375
Query: 496 FVPNSHYSS--FDK----------RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+ N + S D+ P TYN L+ C Y V A LMNEM+
Sbjct: 376 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++TILID G +E A +L M G++ + V Y I + ++++
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 495
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++F +M +P++ T+ +L+ + +++ ++ L +YQDM G
Sbjct: 496 ALNMFGDMSSKGCKPDIFTFNSLIFGLCK---VNKFEEALGLYQDMLLEG 542
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK---FEEALGLY 535
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 536 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R L
Sbjct: 595 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM----IHRGLTP 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD 528
D I+ + + + FDK P TYN L+ C +
Sbjct: 651 DIVTYNSLINGLCKTGRAQ----------EALNLFDKLQVEGICPDAITYNTLISWHCKE 700
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILI 555
+ L++ G PN ++W IL+
Sbjct: 701 GMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 28/337 (8%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y +L+ C G A+ + +V + +V ++T++ +
Sbjct: 335 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP--------NVVLFNTLINGYVSRGR 386
Query: 379 WQMALKV-KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A V E MLS G P+ T+++LI G + A L EM GCEPN
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNF 496
IL+ + + + A + +S +AL + G IS + +K Q N
Sbjct: 447 ILIDRFCKEGRLEEARNVLDE--MSGKGLAL--NAVGYNCLISALCKDEKVQDALNM--- 499
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ + KP T+N L+ C + L +M G+ N I++ L
Sbjct: 500 -----FGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G ++ AL+++ M G D + Y IK R+ +++ +LFE+M +
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN ++ L+ R G+ +Q L +DM G
Sbjct: 614 NPNNISCNILINGLCRTGN---IQHALEFLRDMIHRG 647
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ K A++ED+ S+ + N N L+N +++ LE ++M G+ D+ +Y
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G AQE L+ +G+ D TY+T++ + A +
Sbjct: 656 NSLINGLCKTGR---AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLS 711
Query: 388 DMLSAGVTPNTITWSSLIN 406
+ +G PN +TW L++
Sbjct: 712 RGVDSGFIPNEVTWYILVS 730
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 173/415 (41%), Gaps = 54/415 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K DL + + ++ + P++ T+ID GD ++R ++ D+ S+ N+
Sbjct: 49 KSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVV 108
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 109 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ A V +DM++ G PN IT+++L+N
Sbjct: 169 SLR----DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 224
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A +E+A + E M+ G P+ ++L+ A +A + D A L
Sbjct: 225 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA------ 278
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
S TPN P T+NIL+ C
Sbjct: 279 ----------------------SRGCTPNV--------------LVPDKVTFNILIAGAC 302
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++ + AL EM L P+ +++ LID +G VE A IL +M G+ P+VV
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y + +S R+++A EEM P+ +TY +L+ A R + Q
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 39/353 (11%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG+T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNDLGAG 56
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L +M GC PN ++L+
Sbjct: 57 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLING 116
Query: 443 CVEACQFDRAFRLFRSWTLSKTQV-----ALGEDYDG------NTDRISNMEHKDKQSIT 491
+ + D A L + T V DG + M S+
Sbjct: 117 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176
Query: 492 NTPNFVPNSHY--------------SSFDKRFS--FKPTTTTYNILMKACC--TDYYRVK 533
+P+ V S S FD + + P TYN L+ C R
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV-----VAYTT 588
A++ M G++P+ I++++L+DA + V+ AL++L M G +P+V V +
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
I ++ +QA +LFEEM +QP+++T+ L+ + G + + L
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 160/393 (40%), Gaps = 75/393 (19%)
Query: 302 AHDLKFTLEVYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A D LE+++ M + GV + +YN ++ C + + E++ E L +G
Sbjct: 14 AGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE---LVERG-HH 69
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+T++ A + A ++ DM S G PN +T+S LIN G +++A L
Sbjct: 70 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129
Query: 421 FEEMLQAGCE--PNSQCCNILLQA------CVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+EM + C+ PN N L EAC+ R+ R S +S V
Sbjct: 130 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVTFSTLI 188
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC--TD 528
DG + D+ S FD + + P TYN L+ C
Sbjct: 189 DG----LCKCGQIDEAC-------------SVFDDMIAGGYVPNVITYNALVNGLCKADK 231
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV----- 583
R A++ M G++P+ I++++L+DA + V+ AL++L M G +P+V
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP--------------------------- 616
V + I ++ +QA +LFEEM +QP
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 617 --------NLVTYITLLRARSRYGSLHEVQQCL 641
N+VTY L+ + G + E Q L
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 384
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 156/368 (42%), Gaps = 64/368 (17%)
Query: 254 PNMYICRTIIDVCGIC-GDYM-KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
PN+ +++ G+C D M ++ A+ E + + VT ++ ++ L++ A + L
Sbjct: 214 PNVITYNALVN--GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271
Query: 310 EVYKNMQKLG-----VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
E+ M G ++ D ++NIL+ C AGN A ++ E + AK L+ DV
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE---MVAKN-LQPDVM 327
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+ ++ A + A + + M + GV PN +T+++L++ +G +E+A EEM
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +GC P+S L+ A A + D A +L
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL------------------------- 422
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
K F + P T TYNIL+ +A+ + EM
Sbjct: 423 ----------------------KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++ SGN+ G +++L+++ GM PD ++ + RS +L
Sbjct: 461 GHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDV 520
Query: 603 FSLFEEMK 610
++ +E +
Sbjct: 521 KAMIKEFE 528
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 184/463 (39%), Gaps = 46/463 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + K DL A R + PN+ +I+ G+C G ++R +
Sbjct: 73 VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN--GLCKVGRIDEARELI 130
Query: 280 EDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG-----VMADMASYNILLK 332
+++ +S +V NI +NS ++ T E + M+ L V D +++ L+
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLD-GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 189
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A ++ + + A G + +V TY+ +V A + A + E M+
Sbjct: 190 GLCKCGQIDEACSVFDD---MIAGGYVP-NVITYNALVNGLCKADKMERAHAMIESMVDK 245
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-----SQCCNILLQACVEAC 447
GVTP+ IT+S L++A A V++A+ L M GC PN NIL+ +A
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305
Query: 448 QFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN----- 499
F++A LF Q + G DG +D + PN
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365
Query: 500 ------SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
++ F P + TY L+ A C AL ++E+++
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ IL+D SG E A+ +L+ M G PD + RS L
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
L + + P+ T ++L R G L +V+ + ++
Sbjct: 486 MELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 173/399 (43%), Gaps = 37/399 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G+C G +R + +D+ V+LN +NSL++ V D E+ + M+ G+
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGI 243
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
A + +Y IL+ + A + + ++ E+K G DV+ Y+ ++ + A +
Sbjct: 244 EATVGTYTILVDSLSTARDISKVEALFNEMKANNVVG----DVYLYTAVINAYCRAGNMR 299
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A KV ++ + GV PN T+ LIN G +E A L +M G N N ++
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNM-EHKDKQSITNTP 494
D A ++ + K V L + Y NT R++ + E K I
Sbjct: 360 DGYCRKGMVDDALKI--KAAMEKMGVEL-DIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
VPN TY L+ C D V+A L EM G +P+ +++
Sbjct: 417 GVVPN---------------YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 461
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ID G++ A + K M + G PDV Y + + + ++ A LFEEMK
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN+V Y L+ ++ G + +Y DM KAG
Sbjct: 522 GTEPNVVAYTALISGLAKEG---RSEAAFQLYDDMLKAG 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 255 NMYICRTIID-VC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF 307
N I T+ID C G+ D +K +A E + V L+IY +N+L VN D
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKM---GVELDIYTYNTLACGLCRVNRLDEAK 407
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
TL M ++GV+ + +Y L+ C G+ V A+ ++ E+ KG V TY+
Sbjct: 408 TL--LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE---KGATP-SVVTYN 461
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQ 426
++ + + A + +++M G P+ T++SL++ C N G V+ A+ LFEEM Q
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVN-GKVDVALKLFEEMKQ 520
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G EPN L+ + + + AF+L+
Sbjct: 521 RGTEPNVVAYTALISGLAKEGRSEAAFQLY 550
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + GD +++R ++ ++ + T ++ +N +++ ++
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K G + D+ +Y L+ C+ G +A +++ E+K +G + +V Y+ ++
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ---RGT-EPNVVAYTALIS 535
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML AG+ P+ +S+L+ +
Sbjct: 536 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGS 571
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 180/403 (44%), Gaps = 58/403 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I++ G K+ AI +++ S + N ++ L++ ++ HD
Sbjct: 449 TPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFR 508
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M K G+ D A YN+L++A C GN A I +++ K ++ + I+
Sbjct: 509 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ----KERMQPSNRAFRPII 564
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ FA A + AL + + M +G P +T+++LI+ VE+A+ + +M AG
Sbjct: 565 EGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGIT 624
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I+++ +AF F T++ G
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYF-------TKIKEG--------------------- 656
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K Y L++ACC AL EM + ++ N
Sbjct: 657 -------------------GLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ ILID G+V A ++K M+EDG+ P++ YT+ I C ++ +++A ++ +E
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDE 757
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M ++PNL TY TL++ +R SL + + L +++M AG
Sbjct: 758 MSDVGLKPNLKTYTTLIKGWAR-ASLPD--RALKCFEEMKLAG 797
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+R + +K P+ R II+ + GD ++ I + +R
Sbjct: 528 LIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSG 587
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + + ++ + V M G+ + +Y I+++ G+ A
Sbjct: 588 CAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAF 647
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K +G LKLDV+ Y T+++ + Q AL V +M S + NT ++ L
Sbjct: 648 EYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNIL 703
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 704 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 751
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ SQ +
Sbjct: 634 MRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKI 693
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +V+N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ AQ
Sbjct: 694 ARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQT 753
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + K LK TY+T++K +A A ALK E+M AG+ P+ + L+
Sbjct: 754 VIDEMSDVGLKPNLK----TYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLV 809
Query: 406 NA 407
+
Sbjct: 810 TS 811
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 624 TPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 683
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A ++ +K ++ GV ++ TY++ +
Sbjct: 684 VTREMSSQKIARNTFVYNILIDGWARRGDVWEAADL---MKQMKEDGVPP-NIHTYTSYI 739
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A V ++M G+ PN T+++LI A A L ++A+ FEEM AG +
Sbjct: 740 NACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLK 799
Query: 431 PNSQCCNILL 440
P+ + L+
Sbjct: 800 PDEAAYHCLV 809
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M + G+ PN ++SL++A A A + A+ EEM G E +IL+ +
Sbjct: 301 ENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKI 360
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS--ITNTPNFVPNSHYSS 504
A LF+ +KT + D N SN+ H QS + V
Sbjct: 361 NDTQSADNLFKE---AKTNLG-----DLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDG 412
Query: 505 FDKRF-SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D ++ Y I+ K C + R+K +P+ IS+ LI+
Sbjct: 413 IDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECC-------FTPSIISYGCLINLYVKI 465
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G V A+ I K M G+ + Y+ I + AF +FEEM +QP+ Y
Sbjct: 466 GKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIY 525
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQ 645
L+ A + G++ + L Q
Sbjct: 526 NLLIEAFCKMGNMDRAIRILEKMQ 549
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 394 QSGNMDRAEE 403
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 188/430 (43%), Gaps = 59/430 (13%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N +R+ K + + Y + + P++Y +I GD +K + + ++ +
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N++ +N+ + + LEV K M + G+ D +Y +L+ C + A
Sbjct: 272 -CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + + + G L + FTY+ ++ F + AL++K++M++ G+ N +T+++
Sbjct: 331 KLIF---ESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I A AG + +AM LF EML AG EP++ N+L+ +++ +A L K
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
P+ TY++L+
Sbjct: 447 -----------------------------------------------LTPSPFTYSVLIS 459
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +D + ++++M G+ PN + LI A E A+++LKIM +G+ P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+ Y I R+K++++A L +M I+PN TY + S+ G E+Q
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG---EIQVAE 576
Query: 642 AVYQDMWKAG 651
++DM +G
Sbjct: 577 RYFKDMLSSG 586
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 176/397 (44%), Gaps = 27/397 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P+ + +ID D K+ + +++++ +T + + ++ L++ H DL+ EV
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + GV ++ Y L+KA +A E+ +K + A GVL D+F Y+ ++
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL---LKIMIANGVLP-DLFCYNCLII 529
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK + A + DM G+ PN T+ + IN + +G ++ A F++ML +G P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL++ + A F+ L K + Y +S K K+++
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHSLSK-NGKTKEAMG 647
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
F+ + P YN L+ C D + L +EM G++PN +
Sbjct: 648 VFLKFL----------KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI+ G V A ++ + E + PDVV Y+T I +S L +AF LF+EM
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL-------HEVQQ 639
I P+ Y L+ + G+L HE QQ
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 175/416 (42%), Gaps = 92/416 (22%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + D+ + + N + + + +N+ + +++ +K+M G++ + Y IL+
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K C GNTV A + K + KG++ D+ YS I+ + + A+ V L
Sbjct: 599 KGHCDVGNTVEALSTF---KCMLEKGLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P+ ++SLI+ G +E+A L++EML G PN N L+ + + +
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK 714
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A LF +E KD
Sbjct: 715 ARELF-----------------------DEIEEKD------------------------L 727
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL- 568
P TY+ ++ C +A L +EM + G+SP+ + ILID CG GN+E AL
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 569 ---------------------------------QILKIMREDGMSPDVVAYTTAIKVCVR 595
++ M + ++P++V YT I +
Sbjct: 788 LFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +++A LF +M+ I PN +TY +LL + ++ G+ ++ +++++DM G
Sbjct: 848 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM---ISLFKDMEARG 900
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 172/386 (44%), Gaps = 55/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLE-- 310
PN + I++ G+ + ++D+ S + N ++ L + H D+ T+E
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL--IKGHCDVGNTVEAL 611
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+K M + G++ D+ +Y+ ++ + G T A ++ +K L+ GV+ DVF Y+++
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKT-GVVP-DVFLYNSL 667
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A ++ ++ML G+ PN + +++LIN G V +A LF+E+ +
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRIS 480
P+ + ++ ++ AF+LF +SK G Y +GN ++
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEM-ISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 481 NMEHKDKQ-SITNTPNFVPNSHYSSF-----------------DKRFSFKPTTTTYNILM 522
++ H+ +Q S+ + F NS SF DK+ + P TY IL+
Sbjct: 787 SLFHEAQQKSVGSLSAF--NSLIDSFCKHGKVIEARELFDDMVDKKLT--PNIVTYTILI 842
Query: 523 KACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
D Y +M E M T + PN +++T L+ + GN + + K M
Sbjct: 843 -----DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897
Query: 576 EDGMSPDVVAY-TTAIKVCVRSKRLK 600
G++ D +AY A C K L+
Sbjct: 898 ARGIACDAIAYGVMASAYCKEGKSLE 923
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP L+ + + F K+ D+ A + YD + +PN+ + T+I+ G+C G+
Sbjct: 657 VVPDV-FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN--GLCKLGEVT 713
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+R +++++ +++ ++ ++++++ + +L +++ M G+ D Y IL+
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++ E + K V L F ++++ F A ++ +DM+
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQ---KSVGSLSAF--NSLIDSFCKHGKVIEARELFDDMVD 828
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+TPN +T++ LI+A A ++E+A LF +M PN+
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 870
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 26/271 (9%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + I+ G + +A +F + G P CCN L++ ++A ++++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 457 RSWT-------------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHY 502
S + K +G+ G +S ME + K ++ F+
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM-VLSEMEKECKPNLFTYNAFIGGLCQT 289
Query: 503 SSFDKRFSFK---------PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISW 551
+ D+ K P TY +L+ C K + M + GL+PN ++
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LID GN+E AL+I M G+ +VV Y I ++ + +A SLF EM
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++P+ TY L+ + + + + LA
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K ++ A +D ++ P++ TIID G C G+ ++ ++
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID--GYCKSGNLTEAFKLF 754
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ S+ ++ + Y++ L++ +L+ L ++ Q+ V ++++N L+ + C
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKH 813
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + A+E++ ++ ++ K L ++ TY+ ++ + A+ + A ++ DM + + PN
Sbjct: 814 GKVIEARELFDDM--VDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+T++SL+ + G + + LF++M G
Sbjct: 870 TLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 229/549 (41%), Gaps = 64/549 (11%)
Query: 114 EMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC---QRLLDS-G 169
+MV +G+ S+ + V+G L + +L A LF+ K L+ + L+D G
Sbjct: 241 DMVVAGLSPSVFT--YNMVIGCLAREGDLEAAR-SLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
+V M G + V EE + E PDV I Y ++ FC F R
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCE--------------PDV---ITYNSLIN----CFCKFER 336
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ A K+ PN+ T+ID G +++ + D+ +
Sbjct: 337 -------IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQP 389
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N + + SL++ N DL ++ MQ+ GV ++ +Y LL C G A+E++
Sbjct: 390 NEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G + L+A L + Y+++ + AK + A+ + E+M + P+ + + + I
Sbjct: 450 GAL--LKAGWTLNQQI--YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKT 464
+E +M + EM+ G NS L+ A + + A L + + T
Sbjct: 506 LCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G DG +I ++ + Y R +P Y L+
Sbjct: 566 VVTYGVLIDGLC-KIGLVQQAVR--------------YFDHMTRNGLQPNIMIYTALIDG 610
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + K L NEM G+SP+ + +T LID GN AL + M E GM D
Sbjct: 611 LCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELD 670
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AYT+ I R +++ A SL +EM I P+ V I LLR +Y L ++ + LA
Sbjct: 671 LCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR---KYYELGDINEALA 727
Query: 643 VYQDMWKAG 651
++ DM + G
Sbjct: 728 LHDDMARRG 736
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 171/409 (41%), Gaps = 58/409 (14%)
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK 306
S +++ P + T+ +V G ++R + + V + N L++ + K
Sbjct: 172 STRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSK 231
Query: 307 --FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L +K+M G+ + +YN+++ G+ A+ ++ E+K AKG L+ D+
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK---AKG-LRPDIV 287
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY++++ + A+ V E+M AG P+ IT++SLIN + QA M
Sbjct: 288 TYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G +PN + L+ A +A A + F D I
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF-------------------VDMI----- 383
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
R +P TY L+ A C D L +EM+
Sbjct: 384 -----------------------RVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G++ N +++T L+D G + A ++ + + G + + YT+ +++K +++A
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ EEM ++P+L+ Y T + R +E++ +AV ++M G
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQ---NEIEDSMAVIREMMDCG 526
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 188/430 (43%), Gaps = 59/430 (13%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N +R+ K + + Y + + P++Y +I GD +K + + ++ +
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N++ +N+ + + LEV K M + G+ D +Y +L+ C + A
Sbjct: 272 -CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + + + G L + FTY+ ++ F + AL++K++M++ G+ N +T+++
Sbjct: 331 KLIF---ESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I A AG + +AM LF EML AG EP++ N+L+ +++ +A L K
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
P+ TY++L+
Sbjct: 447 -----------------------------------------------LTPSPFTYSVLIS 459
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +D + ++++M G+ PN + LI A E A+++LKIM +G+ P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+ Y I R+K++++A L +M I+PN TY + S+ G E+Q
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG---EIQVAE 576
Query: 642 AVYQDMWKAG 651
++DM +G
Sbjct: 577 RYFKDMLSSG 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 202/477 (42%), Gaps = 95/477 (19%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K D+ A K +P+ + +I G+C D K+ + + + V N
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLIS--GLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++++ +L+ + ++ +E+ K M GV+ D+ YN L+ C A A+ +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML-- 543
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + KG+ K + TY + +++ + Q+A + +DMLS+G+ PN + ++ LI
Sbjct: 544 -LVDMGEKGI-KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ G +A+ F+ ML+ G P+ + + ++ + + + A +F + KT V
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL--KTGV-- 657
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTYN-------- 519
P+ F+ NS S F K + + Y+
Sbjct: 658 ------------------------VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693
Query: 520 ---ILMKACCTDYYRVKA--------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
++ DY K+ L +EM + G+SP+ + ILID CG GN+E AL
Sbjct: 694 PNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 753
Query: 569 ----------------------------------QILKIMREDGMSPDVVAYTTAIKVCV 594
++ M + ++P++V YT I
Sbjct: 754 SLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 813
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++ +++A LF +M+ I PN +TY +LL + ++ G+ ++ +++++DM G
Sbjct: 814 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM---ISLFKDMEARG 867
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 187/416 (44%), Gaps = 36/416 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P+ + +ID D K+ + +++++ +T + + ++ L++ H DL+ EV
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + GV ++ Y L+KA +A E+ +K + A GVL D+F Y+ ++
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL---LKIMIANGVLP-DLFCYNCLII 529
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK + A + DM G+ PN T+ + IN + +G ++ A F++ML +G P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSI 490
N+ IL++ + A F+ L K + Y +S N + K+ +
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKC-MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648
Query: 491 -------TNTPN-FVPNSHYSSFDKRFSFKPTTTTYN-----------ILMKACCTDYYR 531
P+ F+ NS S F K + + Y+ ++ DY
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708
Query: 532 VKA--------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
K+ L +EM + G+SP+ + ILID CG GN+E AL + ++ + +
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SL 767
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
A+ + I + ++ +A LF++M ++ PN+VTY L+ A + + E +Q
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 823
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 167/402 (41%), Gaps = 56/402 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN + +ID G+ ++ I +++ ++ + LN+ +N+++ A ++ +
Sbjct: 343 NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M G+ D +YN+L+ + + A E+ E+K + L FTYS ++
Sbjct: 403 LFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK----LTPSPFTYSVLI 458
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q A +V + M+ GV PN + +LI A E A+ L + M+ G
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ C N L+ A + + A L V +GE
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLL---------VDMGE-------------------- 549
Query: 491 TNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
PN+H Y +F +S Y++ +M + G+ PN++
Sbjct: 550 ---KGIKPNAHTYGAFINLYSKSGEIQV--------AERYFK------DMLSSGIVPNNV 592
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+TILI GN AL K M E G+ PD+ AY+ I ++ + K+A +F +
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P++ Y +L+ + G + + Q +Y +M G
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQ---LYDEMLHNG 691
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 53/366 (14%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + D+ + + N + + + +N+ + +++ +K+M G++ + Y IL+
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K C GNTV A + K + KG++ D+ YS I+ + + A+ V L
Sbjct: 599 KGHCDVGNTVEALSTF---KCMLEKGLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ--ACVEACQF 449
GV P+ ++SLI+ G +E+A L++EML G PN N L+ ++
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNMEHKDKQ-SITNTPNFVPN 499
AF+LF +SK G Y +GN ++ ++ H+ +Q S+ + F N
Sbjct: 715 TEAFKLFDE-MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF--N 771
Query: 500 SHYSSF-----------------DKRFSFKPTTTTYNILMKACCTDYYRVKALMNE---- 538
S SF DK+ + P TY IL+ D Y +M E
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLT--PNIVTYTILI-----DAYGKAEMMEEAEQL 824
Query: 539 ---MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY-TTAIKVCV 594
M T + PN +++T L+ + GN + + K M G++ D +AY A C
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884
Query: 595 RSKRLK 600
K L+
Sbjct: 885 EGKSLE 890
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----------- 460
G + +A +F + G P CCN L++ ++A ++++ S
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245
Query: 461 --LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-SHYSSFDKRFSFK----- 512
+ K +G+ G +S ME + K ++ F+ + D+ K
Sbjct: 246 TNVIKAHCKVGDVIKGKM-VLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304
Query: 513 ----PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TY +L+ C K + M + GL+PN ++T LID GN+E
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL+I M G+ +VV Y I ++ + +A SLF EM I+P+ TY L+
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424
Query: 627 ARSRYGSLHEVQQCLA 642
+ + + + LA
Sbjct: 425 GYLKSHDMAKACELLA 440
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 117/217 (53%), Gaps = 10/217 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP L+ + + F K+ D+ A + YD + +PN+ + T+I+ G C G+
Sbjct: 657 VVPDV-FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++++ S+ ++ + Y++ L++ +L+ L ++ Q+ V ++++N L+
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLI 774
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G + A+E++ ++ ++ K L ++ TY+ ++ + A+ + A ++ DM +
Sbjct: 775 DSFCKHGKVIEARELFDDM--VDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ PNT+T++SL+ + G + + LF++M G
Sbjct: 831 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + F K ++ A +D +PN+ +ID G ++ ++ D+
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829
Query: 284 SQNVTLNIYVFNSLM-NVNAHDLKFTL-EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++N+ N + SL+ + N +F + ++K+M+ G+ D +Y ++ A C G ++
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A ++ K L L+ DVF ++ K L++ +M ++ ++ T
Sbjct: 890 EALKLLN--KSLVEGIKLEDDVF--DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTC 945
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
++L+ +G ++A + M + G P S
Sbjct: 946 NTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 171/399 (42%), Gaps = 64/399 (16%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMKSRAIYEDLRSQN 286
+ K D + ++A+ S PN+ T++D C G G K+ A +++ +
Sbjct: 215 KLNKAEDAIEDMKAWGIS------PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 287 VTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N FN+L++ D + + ++ MQK G+ ++ +YN L+ C G A
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ ++ L LK ++ TY+ ++ F K + A KV +D+ + PN IT++++
Sbjct: 329 DLWDKMVGLG----LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G++E+ L ML G PN N L+ L R L
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG------------LCRKQDLQAA 432
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ L E ME+K K TYNIL+
Sbjct: 433 KELLNE-----------MENK------------------------GLKGDVVTYNILIDG 457
Query: 525 CC-TDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C D R + L+NEM +GL PNH+++ L+D G ++ AL + M ++ P+
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
VV Y IK + +L+ A L EM + PN TY
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 176/394 (44%), Gaps = 52/394 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N+ FN +N A L + ++M+ G+ ++ +YN L+ C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ + +K + A + +V T++T++ F + A K E+M G+
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEV-TFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++SLIN N G +E+A+ L+++M+ G +PN N L+ + A ++
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSF------DKR 508
F D +S KQ + PN + N+ ++ ++
Sbjct: 366 F--------------------DDVS------KQEL--VPNVITFNTMIDAYCKEGMMEEG 397
Query: 509 FSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
FS P +TYN L+ C D K L+NEM GL + +++ ILID
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A ++L M G+ P+ V Y T + +LK A ++ M+ + QPN
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY L++ Y +++++ + +M + G
Sbjct: 518 VVTYNVLIKG---YCKINKLEAANGLLNEMLEKG 548
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ AI +++ S + N ++ L+N ++ HD ++++M K G+ D A Y
Sbjct: 440 GKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 499
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I+ ++ K ++ T+ I++ FA A + A +
Sbjct: 500 NLLVEAFCKMGNMDRAIRIFERMQ----KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLD 555
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + ++M AG PN I+++ +
Sbjct: 556 LMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASG 615
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 616 DIGKAFEYF-------TKI----------------------------------------K 628
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 629 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 688
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +LK M+EDG+ P++ +T+ I C ++ +++A ++ +EM ++PN+ T+ TL+
Sbjct: 689 EAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 748
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +C +++M AG
Sbjct: 749 KGWARVSLPDRALKC---FEEMKSAG 771
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 195/465 (41%), Gaps = 74/465 (15%)
Query: 229 REFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
REFG K+ D A ++ + PN ++ +++ + GD + + E+
Sbjct: 252 REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEE 311
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAG 338
++S+ + + + ++ L++ +D + ++K + KL + + NI + A C +G
Sbjct: 312 MKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNI-IHAHCQSG 370
Query: 339 NTVLAQEIYGEVKHLEAKGV----------------------------------LKLDVF 364
N A+E+ V+ +E G+ K +
Sbjct: 371 NMDRAEEL---VREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y ++ ++ A+ + ++M S G+ N T+S LIN + A +FE+M
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 487
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+++G +P+ N+L++A + DRA R+F + M+
Sbjct: 488 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKER------------------MQP 529
Query: 485 KDKQSITNTPNF-VPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ F V +FD +R PT TYN L+ + KA ++
Sbjct: 530 SNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVL 589
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
++M G++PN ++TI++ SG++ A + ++E G+ DV Y T ++ C +S
Sbjct: 590 DKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 649
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
R++ A ++ EM +I N Y L+ +R G + E L
Sbjct: 650 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLL 694
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K ++ A+R ++ +K P+ R II+ + GD ++ + +R
Sbjct: 502 LVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSG 561
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 562 CAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 621
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K + LKLDV+ Y T+++ + Q AL V +M + NT ++ L
Sbjct: 622 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 677
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 678 IDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRA 725
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 608 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 667
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ G+ ++ ++ + ACC AG+ A+
Sbjct: 668 PRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAEN 727
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ A LK +V T++T++K +A ALK E+M SAG+ P+ + L+
Sbjct: 728 VIQEM----ADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 783
Query: 406 NA 407
+
Sbjct: 784 TS 785
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A ++ +K ++ G+ ++ T+++ +
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL---LKQMKEDGIPP-NIHTFTSYI 713
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A V ++M G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 714 NACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLK 773
Query: 431 PNSQCCNILL 440
P+ + L+
Sbjct: 774 PDEAAYHCLV 783
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 42/375 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ ++Y +++L+ DL+ +V + M++ G ++ +YN L+ C AG
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E +G K +E G++ D FTY I+ A + ++M AG+ PN +
Sbjct: 294 I---EEAFGYKKEMEDYGLVP-DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+S+LI+ G ++A + +EM AG +PN + L++ + + RA R+ +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-------- 511
T +I M T T N V H +K +F
Sbjct: 410 T-----------------KIGYMAD------TMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446
Query: 512 ---KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TY+I++ C + R L+ +M GL PN + LI G+
Sbjct: 447 GGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSL 506
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + LK M + ++PD+ Y + I ++ +A ++EM QPN TY L+
Sbjct: 507 ACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIH 566
Query: 627 ARSRYGSLHEVQQCL 641
S G+L + +Q L
Sbjct: 567 GYSMAGNLEKAEQLL 581
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 38/399 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++R ++ N+Y ++ ++N + + + + M G+ + Y L+ C
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ LA E ++ + L D++ Y++++ ++ A++ ++ML G
Sbjct: 500 REGSFSLACETLKKM----TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQ 555
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+ LI+ + AG +E+A L +ML +G PN +L+ ++ ++
Sbjct: 556 PNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSST 615
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ----SITNTPNFVPNSH-YSSFDKRF- 509
+S L K + Y +S+ H S+ VP+S Y S F
Sbjct: 616 LKSM-LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674
Query: 510 ------------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+P + YN L+ C D + + N + GL PN +
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID +G++ A+ + M +G++PD Y+ C S L+QA + EEM
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794
Query: 610 --KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ Y I + ++ TL+ + G L E + L V D
Sbjct: 795 IARGYAI---ISSFNTLVHGFCKRGKLQETVKFLHVMMD 830
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 163/382 (42%), Gaps = 32/382 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ + T+ID G+ ++ I +++ + V N +++L+ + +
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M K+G MAD +YN++++ N A + E++ KG + +V+TYS I+
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMR----KGGISPNVYTYSIIIN 461
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + E M++ G+ PN ++ LI+ G A ++M + P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521
Query: 432 NSQCCNILLQACVEACQFDRAF--------RLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+ C N L+ + D A + F+ + + G GN ++ +
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
H+ S N +F+ + K + + ++T + M G
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSST------------------LKSMLEKG 623
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P++ + I+I SG+++ A+ +L ++ ++G+ PD + Y + I ++ +++A
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 604 SLFEEMKHYQIQPNLVTYITLL 625
L +EM I+P + Y L+
Sbjct: 684 GLLDEMAKKGIEPGISCYNALI 705
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 32/378 (8%)
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
++ H+ + + M+K G+ ++ +Y+I++ C G + A G ++ + A G
Sbjct: 428 HLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS---GLLEQMIADG- 483
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
LK + F Y+ ++ + + +A + + M +TP+ ++SLI +N G +++A+
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGE 470
++EML+ G +PN L+ A ++A +L S Q+ G
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603
Query: 471 DYDGNTDRISN---------MEHKDKQSITNTPNFVPNSHYS------SFDKRFSFKPTT 515
N +++S+ + ++ N + H S ++ P +
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDS 663
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C D + L++EM G+ P + LID S ++ A I
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS 723
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ P+ V YTT I ++ ++ A L+ EM + P+ Y L S G
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783
Query: 634 LHEVQQCLAVYQDMWKAG 651
L QQ L + ++M G
Sbjct: 784 L---QQALFITEEMIARG 798
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 25/276 (9%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV+ M AG++P+ T+S+LI A +E A + EEM + GC N N L+
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 444 VEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHK---DKQSITN-TPNF 496
A + AF + + L G +G R + K D+ S PN
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348
Query: 497 VPNS-------HYSSFDKRFSF---------KPTTTTYNILMKACCT--DYYRVKALMNE 538
V S + D+ F +P TY+ L++ C R ++ +
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M +G + +++ ++I+ N E A +L MR+ G+SP+V Y+ I +
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++A L E+M ++PN Y L+ R GS
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSF 504
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + P TY+ L++A C D K ++ EMR G S N +++ LI +
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A K M + G+ PD Y I + R QA L +EM + PN+V Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TL+ R G+ E + ++M AG
Sbjct: 352 STLIDGFMRQGNADEA---FKIVKEMSAAG 378
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 178/430 (41%), Gaps = 85/430 (19%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
R A + PR I+ EFGK ++ ++ Y S +Y+C + D+ G+
Sbjct: 83 RMARMNPRPSIV------EFGKFLGSIAKMKQY--------STVVYLCNQM-DLFGV--- 124
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ +Y +LNI + N L +N D F + V+ M KLG+ D+ ++ L+
Sbjct: 125 ---THTVY--------SLNILI-NCLCRLNHVD--FAVSVWGKMFKLGIQPDVITFTTLI 170
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G +A E+Y E+ + + DV +Y+T++ ++ MA+ V + M
Sbjct: 171 NGVCNEGKIKVAVELYNEM----VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ 226
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN +T++++I++ LV AM EM+ G P++ N ++ Q +
Sbjct: 227 NGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNE 286
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A RLF+ ME
Sbjct: 287 ATRLFKR-----------------------MEQN------------------------GC 299
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYNI++ + D A ++EM G+ P+ +++T ++ G + A++
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G PDVVAY T I + + + A EM I PN VTY T+L
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC 419
Query: 630 RYGSLHEVQQ 639
G L E Q
Sbjct: 420 NLGQLDEATQ 429
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 18/326 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ ++K M++ G D+ +YN ++ + C A E E + +G+ + TYST
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE---MVDRGIPP-NAVTYST 413
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ F + A ++ ++M+ V PNT+T+S L++ G+V +A +FE M + G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EPN N L+ C+ + A ++F + K Y+ + N DK
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFE-IMVGKGCAPDLHSYNILINGYCNSRRMDKA 532
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
T V K+ + P T TYN +MK C + L +M + G+ P
Sbjct: 533 KALLTQMSV---------KKLT--PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++++IL++ G+++ AL++ K M+E + PD++ YT I+ +L+ A LF
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
++ IQP TY +++ + G
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEG 667
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 45/254 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN ++D G+C + M S A ++E + + V NIY +N+LMN K
Sbjct: 441 PNTLTFSILVD--GLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498
Query: 310 EVYKNMQKLGVMADMASYNIL-----------------------------------LKAC 334
+V++ M G D+ SYNIL +K
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + AQE++ K + + G+L + TYS ++ ALK+ + M +
Sbjct: 559 CYVGRLLDAQELF---KKMCSSGMLP-TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ I ++ LI G +E A LF ++ G +P + N++++ ++ D A+
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674
Query: 455 LFRSWTLSKTQVAL 468
LFR W + K V +
Sbjct: 675 LFRKWKMMKHNVII 688
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 170/386 (44%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ A+ +++ S + N ++ L+N ++ HD ++++M K G+ D A Y
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I+ +K K ++ T+ I++ FA A + AL +
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMK----KERMQPSNRTFRPIIEGFAVAGDMKRALDTLD 557
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ VE+A+ + ++M AG PN I+++ +
Sbjct: 558 LMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASG 617
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 618 DIGKAFEYF-------TKI----------------------------------------K 630
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 631 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 690
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ +T+ I C ++ +++A ++ +EM ++PN+ T+ TL+
Sbjct: 691 EAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 750
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + + L +++M AG
Sbjct: 751 KG---WAKVSLPDRALKCFEEMKSAG 773
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 187/435 (42%), Gaps = 68/435 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +RA +E++R++ + N +VF SL++ A D++ L + M+ G+ + +Y
Sbjct: 267 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTY 326
Query: 328 NILL-----------------------------------KACCLAGNTVLAQEIYGEVKH 352
+IL+ A C +GN A+E+ V+
Sbjct: 327 SILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEEL---VRE 383
Query: 353 LEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E G+ +DV Y +++ + A+ + L V E + G P+ I++ LIN
Sbjct: 384 MEEDGIDAPIDV--YHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKI 441
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA---- 467
G V +A+ + +EM G + N++ ++L+ + F AF +F S Q
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 468 --LGEDY--DGNTDRISNMEHKDKQSITNTPN--FVP-----------NSHYSSFD--KR 508
L E + GN DR + + K+ N F P + D +R
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561
Query: 509 FSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT TYN L+ + R +++++M G++PN ++TI++ SG++
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 621
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + ++E G+ DV Y T ++ C +S R++ A ++ EM +I N Y L+
Sbjct: 622 AFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID 681
Query: 627 ARSRYGSLHEVQQCL 641
+R G + E +
Sbjct: 682 GWARRGDVWEAADLM 696
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V F K ++ A+R ++ KK P+ R II+ + GD ++ + +R
Sbjct: 504 LVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSG 563
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ + H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 564 CAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 623
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E + ++K + LKLDV+ Y T+++ + Q AL V +M + NT ++ L
Sbjct: 624 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 679
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
I+ A G V +A L ++M + G PN + AC +A RA
Sbjct: 680 IDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRA 727
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 610 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 669
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ G+ ++ ++ + ACC AG+ A+
Sbjct: 670 PRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAEN 729
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ A LK +V T++T++K +A ALK E+M SAG+ P+ + L+
Sbjct: 730 VIQEM----ADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 785
Query: 406 NA 407
+
Sbjct: 786 TS 787
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A ++ +K ++ G+ ++ T+++ +
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL---MKQMKEDGIPP-NIHTFTSYI 715
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A V ++M G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 716 NACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLK 775
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 776 PDEAAYHCLVTS 787
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TY+IL+ D L E +T + N I ++ +I A SGN++ A +++
Sbjct: 322 TVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELV 381
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M EDG+ + Y + + ++ K+ +FE +K +P++++Y L+ + Y
Sbjct: 382 REMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLI---NLY 438
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
+ +V + LAV ++M G
Sbjct: 439 VKIGKVPKALAVSKEMESHG 458
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 45/423 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++Y ++ + G ++ D+ + V +I +N L N L +K
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-GFRILGLISGAWK 361
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Q++ G+ D+ +Y IL+ C GN +E + + + ++G LKL + TY+ ++
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNI---EESFKLKEKMLSQG-LKLSIVTYTVLL 417
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A+ + +M G+ P+ +T+S G VE+A+ L+EEM
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIY 469
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-------LGEDYDGNTDRISNME 483
PNS C+ ++ E A F S T K+ VA + D I
Sbjct: 470 PNSFVCSAIISGLFEKGAISEAQMYFDSVT--KSDVAEEIILYNIMIDGYAKLGNIGEAV 527
Query: 484 HKDKQSITN--TPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
KQ I +P V NS F K+ PT+ TY LM
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C D + + +++EM + P I++T+++ G + ++Q+LK M G+ PD
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y T I+ ++ L++AF L +M + +QP+ VTY L+ YG+L + + L
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 707
Query: 644 YQD 646
QD
Sbjct: 708 LQD 710
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 31/349 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D+ SYNILL C+AG+ A E + +E GV + D+ TY+ + F
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND---MENHGV-EPDIVTYNILANGFR 351
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T++ LI G +E++ L E+ML G + +
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+LL + ++ + D A L + + L G + + +++ S P
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIEL-YEEMCSKRIYP 470
Query: 495 N-FVPNSHYSS-FDK------RFSFKPTTTT--------YNILMKACCTDYYRVKALMNE 538
N FV ++ S F+K + F T + YNI++ Y ++ +
Sbjct: 471 NSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG----YAKLGNIGEA 526
Query: 539 MRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+R+ G+SP +++ LI G + A+++L ++ G+ P V YTT +
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ F + EM+ I+P +TY +++ + G LHE Q L
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 635
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/395 (18%), Positives = 155/395 (39%), Gaps = 57/395 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
PN ++C II G +++ ++ + +V I ++N +++ A ++ +
Sbjct: 470 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 529
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
YK + + G+ + ++N L+ C G A ++ +K G++ V TY+T++
Sbjct: 530 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK---VHGLVPTSV-TYTTLMN 585
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + +M + + P IT++ ++ G + +++ L + M G P
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 645
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N ++Q+ +A +AF+L ++H
Sbjct: 646 DQITYNTVIQSFCKAHDLQKAFQLHNQM----------------------LQH------- 676
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNH 548
S +P+ TYN+L+ C Y +K L+ ++ +
Sbjct: 677 ------------------SLQPSPVTYNVLINGLCV-YGNLKDADRLLVTLQDQSIRLTK 717
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T +I A G+V+ AL M E G + Y+ I + + A F
Sbjct: 718 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 777
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
M + I P+ + +L A R G + V + A+
Sbjct: 778 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 812
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 140/352 (39%), Gaps = 80/352 (22%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
HD F L M+ L + +A+YN LL +T + ++Y E+K A GV + +
Sbjct: 185 HDALFVL---AKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIK---ASGVPQ-N 234
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+T ++ Q A+ + P+ +++++L++ G V+ A F
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M++ G P+ NILL A + A ++M
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF-----------------------TNDM 331
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN----- 537
E+ +P TYNIL +R+ L++
Sbjct: 332 ENH------------------------GVEPDIVTYNILANG-----FRILGLISGAWKV 362
Query: 538 --EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M GL+P+ +++TILI GN+E + ++ + M G+ +V YT + +
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S R+ +A L EM+ ++P+L+TY S V++ + +Y++M
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTY-----------SRGAVEEAIELYEEM 463
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 147/348 (42%), Gaps = 32/348 (9%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
+D+ K + + + +ID G+ ++ Y+ + + ++ I FNSL+
Sbjct: 495 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 554
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L +++ ++ G++ +Y L+ C G+ ++ + +EAK + K
Sbjct: 555 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM---HSMFDMLHEMEAKAI-KP 610
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
TY+ +VK ++++ + M + G+ P+ IT++++I + A +++A L
Sbjct: 611 TQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH 670
Query: 422 EEMLQAGCEPNSQCCNILLQA-CVEAC--QFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+MLQ +P+ N+L+ CV DR + ++ T+VA T
Sbjct: 671 NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAY-------TTI 723
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVK 533
I H K + N F + +R F+ + Y+ ++ C TD K
Sbjct: 724 IK--AHCAKGDVQNALVF-----FHQMVER-GFEVSIRDYSAVINRLCKRNLITD---AK 772
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M T G+ P+ ++++A SG+ +I +M + G+ P
Sbjct: 773 FFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 195/421 (46%), Gaps = 35/421 (8%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I + G+ + ++ + + N+
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + E+ ++M G+ ++ SYN+++ C G +EI +
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM---KEISFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G++P+ IT++SLI++ A
Sbjct: 300 EMNKRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +A ++M G PN + L+ + + A+R+ + S + V
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ +T P+ V S S F + +
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLT--PDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L +EM VGL P+ ++T LI+A G++
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+Q+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY TL
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 625 L 625
+
Sbjct: 597 I 597
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 130/587 (22%), Positives = 240/587 (40%), Gaps = 93/587 (15%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKK 138
+ ++++ + S+ N+S FA + EM+ S + ++ G +D + +
Sbjct: 172 YNAVLDATIRSKRNIS-FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDR 230
Query: 139 LNELGVAPL-----ELFDG--------SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ + G P L DG GF+LL++ + L+ + V + + E R
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
+ +E V +NK +L ++ + ++ + K+ + AL +
Sbjct: 291 M------KEISFVLTEMNKRGYSLD----------EVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
+H SP++ ++I G+ ++ + +R + + N + +L++ +
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ V K M G + +YN L+ C+AG V A + ++K KG L DV
Sbjct: 395 YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE---KG-LTPDV 450
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+YST++ F + AL+VK M++ G+ P+TIT+SSLI ++A LF+E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML+ G P+ L+ A C+E L ++ L V G D T + +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEG-------DLQKAIQLHNEMVEKGVLPDVVTYSVL-I 562
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYRVKAL 535
+KQ+ T KR K P+ TY+ L++ C ++
Sbjct: 563 NGLNKQARTREA------------KRLLLKLFYEESVPSDVTYHTLIENCSNIEFK---- 606
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
S LI G + A Q+ + M E PD AY I R
Sbjct: 607 --------------SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+++A+SL++EM + VT I L++ + G ++E+ +A
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 198/483 (40%), Gaps = 81/483 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI---YEDLR 283
+R F +L ALR +D +K PN+ T+ID Y K R I +E LR
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID------GYCKLRKIDDGFELLR 264
Query: 284 S---QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
S + + N+ +N ++N + +K V M K G D +YN L+K C G
Sbjct: 265 SMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEG 324
Query: 339 NTVLAQEIYGE-VKHLEAKGVLK--------------------LDVF----------TYS 367
N A ++ E ++H + V+ LD TY+
Sbjct: 325 NFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYT 384
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+V F+ + A +V ++M+ G +P+ +T+++LIN AG + A+ + E+M +
Sbjct: 385 TLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEK 444
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ + +L + D A R+ R VA G D T ++
Sbjct: 445 GLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM------VAKGIKPDTITYSSLIQGFCEQ 498
Query: 488 QSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ + FD+ R P TY L+ A C D + L NEM G
Sbjct: 499 RRTKEACDL--------FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550
Query: 544 LSPNHISWTILIDACGGSGNVEGALQ-ILKIMREDGMSPDVVAYT--------------T 588
+ P+ +++++LI+ A + +LK+ E+ + DV +T +
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
IK + +A +FE M +P+ Y ++ R G ++++ ++Y++M
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGG---DIRKAYSLYKEMV 667
Query: 649 KAG 651
K+G
Sbjct: 668 KSG 670
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++ C AL + M G PN +++ LID ++ ++
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M G+ P++++Y I R R+K+ + EM + VTY TL++ +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G+ H Q L ++ +M + G
Sbjct: 323 EGNFH---QALVMHAEMLRHG 340
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 511 FKPTTTTYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P +YN ++ A + + + EM +SPN ++ ILI +GN++ A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVA 224
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L+ M + G P+VV Y T I + +++ F L M ++PNL++Y ++
Sbjct: 225 LRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVING 284
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G + E+ L +M K G
Sbjct: 285 LCREGRMKEISFVLT---EMNKRG 305
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 178/404 (44%), Gaps = 51/404 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAA 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +YN ++ C A++++ +L A DVFT++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF----YLMATKGCSPDVFTFTTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ NT+T+++LI+ G + A+ L ++M+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ CN LL + + A +F++ SK + ++G
Sbjct: 462 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG--------------- 506
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ P+
Sbjct: 507 ---------------------VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +ID ++ A Q+ M SP+VV + T I ++ R+ LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 605
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM I + + YITL+ + G+ + L ++Q+M +G
Sbjct: 606 EMGRRGIVADAIIYITLIYGFRKVGN---INGALDIFQEMISSG 646
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 40/350 (11%)
Query: 309 LEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L + + M+++ ++ ++ Y+ ++ + C G AQ ++ E ++ KG+ D+FTY+
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE---MQEKGIFP-DLFTYN 294
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ F + W A ++ ++ML ++P+ +T+++LINA G +A L++EML
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354
Query: 428 GCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDG--NTDRISNM 482
G PN+ N ++ + + D A F L + S DG RI +
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD- 413
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ + P R T TYN L+ C D L +M
Sbjct: 414 ---GMELLHEMP-------------RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMSPDVVAYTTA 589
+ G+ P+ ++ L+D +G ++ AL++ K M++ +G+ PDV+ Y
Sbjct: 458 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 517
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
I + + +A L+EEM H I P+ +TY +++ + L E Q
Sbjct: 518 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 147/371 (39%), Gaps = 33/371 (8%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTF 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ AL M PN +T+++L+N G + +A+ L + M++
Sbjct: 153 TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHK 485
G +P ++ + A L R + Y D + + H
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 486 DKQSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILM 522
D Q++ P+ F NS F R+S P TYN L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + ++ L +EM G+ PN I++ +ID ++ A + +M G S
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV +TT I +KR+ L EM + N VTY TL+ G L+
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA--- 449
Query: 641 LAVYQDMWKAG 651
L + Q M +G
Sbjct: 450 LDLSQQMISSG 460
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 54/246 (21%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD + + + + S V +I N+L++ + LK LE++K MQK
Sbjct: 439 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 498
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS+++
Sbjct: 499 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH---RGIVP-DTITYSSMID 554
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--------------- 416
A ++ M S +PN +T+++LIN AG V+
Sbjct: 555 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 417 --------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
A+ +F+EM+ +G P++ +L + +RA +
Sbjct: 615 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 674
Query: 457 RSWTLS 462
+S
Sbjct: 675 EDLQMS 680
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V A L+ + + M++ G D+ + +L++ C AG
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ + ++ + + G N
Sbjct: 291 RLADAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++ ++A G V++A+ +F+EM Q G P N L+ ++A +F+RA LF
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ G +G T + N K +S+ + K P
Sbjct: 407 MNIH------GPTPNGYTHVLFINYHGKSGESLKALKRY-------ELMKSKGIVPDVVA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + +E++ +G+SP++I++T++I C + N + A++I M
Sbjct: 454 GNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E+ +PDV+A + I + ++ R +A+ +F E+K ++P TY TLL R G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 636 EVQQCL 641
EV Q L
Sbjct: 574 EVMQLL 579
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 58/370 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
V+L +N+L+ V+ + E++ M++LG D +Y+++L A G ++
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA---MGKSMRI 817
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ + + KG K TY+TI+ +K A+ + ++S G +P T+
Sbjct: 818 EDMLKIQEEMHNKGY-KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGP 876
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G +E A LF+EML+ GCEPN NILL A ++ LF S
Sbjct: 877 LLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV--- 933
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+Q + P +Y +++
Sbjct: 934 -----------------------EQGMN---------------------PDIKSYTVVID 949
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D L ++ +GL P+ I++ +LI G SG +E AL + M + G++P
Sbjct: 950 TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS +
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS---PENAF 1066
Query: 642 AVYQDMWKAG 651
A Y M G
Sbjct: 1067 AAYGRMIVGG 1076
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 186/433 (42%), Gaps = 41/433 (9%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + + +D ++ + N+ T+ G+ G + ++
Sbjct: 104 CNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMK 163
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + ++VYK M GV+ + +Y++L+ A G
Sbjct: 164 EAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAF---GKRR 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + G + +EA+GV + +V++Y+ ++V A + A ++ M G P+ +T
Sbjct: 221 DAETVVGLLGEMEARGV-RPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M + +P+ LL C ++ S ++
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD---------SRSV 330
Query: 462 SKTQVALGED--------YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
S+ AL D Y D + + D+ FD K+
Sbjct: 331 SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEA-------------LDVFDEMKQKGI 377
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ + R L N M G +PN + + I+ G SG AL+
Sbjct: 378 IPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALK 437
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++M+ G+ PDVVA + ++ RL A +F E+K I P+ +TY +++ S
Sbjct: 438 RYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCS 497
Query: 630 RYGSLHEVQQCLA 642
+ + E + A
Sbjct: 498 KASNADEAMKIFA 510
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 184/426 (43%), Gaps = 60/426 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S ++A K + N+ +D G ++ ++++
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A MA +V ++ + G++P+ I
Sbjct: 432 SLKALKRY---ELMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + +PT TYN
Sbjct: 548 -----------------------------------------------KEMNLEPTDCTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ M + PN I++ ++D +G V AL +L M +
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG----S 633
G PD+ +Y T + V+ RL +AF +F +MK + P+ T T+L + R G +
Sbjct: 621 GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEA 679
Query: 634 LHEVQQ 639
LH V++
Sbjct: 680 LHTVRE 685
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 64/348 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 752 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 805
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 866 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 890
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 891 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKG 1041
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN I +++ I GD K ++E + Q + +I + +++ D + L
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 1019
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 432 NS 433
NS
Sbjct: 1080 NS 1081
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++ C G + K L G L+ D+ TY+ ++ + + AL +
Sbjct: 945 TVVIDTLCADGRL---NDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++ +
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060
Query: 448 QFDRAFRLF 456
+ AF +
Sbjct: 1061 SPENAFAAY 1069
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 40/176 (22%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY++LM A D V L+ EM G+ PN S+TI I G +G +E A +I
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263
Query: 571 LKIMREDGMSPDVVA-----------------------------------YTTAIKVCVR 595
L+ M E+G PDVV Y T + C
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S + ++ +K N+V+Y + A + G V + L V+ +M + G
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVG---RVDEALDVFDEMKQKG 376
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 997
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 998 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 1053
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-ED 281
LF + + F + +AL +++ +P +I G G ++ A++ E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N+L+ V LK +V M + GV D A+Y++L+ A AG
Sbjct: 290 FLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + +K +EA GV K + +S I+ F D WQ A V +M ++GV P+
Sbjct: 350 WESARIL---LKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ + AM F +M + G EP+ N L+ A + + DRA LF
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELF--- 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +N P P TTTYN
Sbjct: 463 --------------------------EEMRESNCP------------------PGTTTYN 478
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I++ + V+A+++EM+ GL PN I++T L+D G SG + A+ ++ M+ D
Sbjct: 479 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 578 GMS-------------------PDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
G+ PDV+ YTT +K +R ++ + ++EEM
Sbjct: 539 GLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEM 589
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 168/397 (42%), Gaps = 47/397 (11%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DLR + + +F+ L++ A LE+ + Q +G+ + L+ A AG
Sbjct: 218 DLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ ++ E G +K Y+ ++K + + A +V ++M GV P+
Sbjct: 278 RVAEAEALFLE---FFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDE 334
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S L++A AG E A L +EM G +P+S + +L + + +AF + R
Sbjct: 335 ATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK--RFSFKPTT 515
S + DR H I + H +F+K +P
Sbjct: 395 MQASGVR----------PDR-----HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDV 439
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L+ A C + R L EMR P ++ I+I+ G + EG +L
Sbjct: 440 VTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-------------------HYQI 614
M+E G+ P+++ YTT + V RS R K+A E MK +
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+P+++TY TL++A R + + + +Y++M +G
Sbjct: 560 RPDVITYTTLMKALIR---VEQFDKVPVIYEEMITSG 593
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 54/239 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ Y+ I+ GD+ K+ A+ ++++ V + + +N +++ + L ++
Sbjct: 367 PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDA 426
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------------GE 349
+ M++ G+ D+ ++N L+ A C G A E++ GE
Sbjct: 427 FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE 486
Query: 350 VKHLEA----------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+H E +G++ ++ TY+T+V V+ + ++ A+ E M + G+ P+
Sbjct: 487 QEHWEGVEAMLSEMKEQGLVP-NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 400 TWSSLINACANAGL----------------VEQ---AMHLFEEMLQAGCEPNSQCCNIL 439
+ +L+NA A GL VEQ ++EEM+ +GC P+ + +L
Sbjct: 546 MYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 604
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 206/467 (44%), Gaps = 47/467 (10%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR--AYDASKKHLSSPNMYICRTIID 264
VN + C+ D + N + + KR L+ R D K LS PN + +
Sbjct: 236 VNKMSEFGCV---PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLS-PNKHTYNML-- 289
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
VCG C G ++ + E + N+ ++ +N L+N +D K + M+K+ V
Sbjct: 290 VCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNV 349
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D+ +YN L+ C + + E+Y ++ ++ KGV K + TY+ I+K
Sbjct: 350 LPDVVTYNTLIDGCSQWRD---SSEVYSLIEEMDKKGV-KCNAVTYNIILKWMCKKGNMT 405
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + M G++P+ +T+++LI A AG + +A + +EM G + ++ N +L
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTIL 465
Query: 441 QA-CVEACQFDRAFRLF-----RSWTLSKTQ---VALGEDYDGNTDRISNM--EHKDKQS 489
CVE + D A+ L R + L + + LG D DR N+ E K++Q
Sbjct: 466 HCLCVEK-KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQI 524
Query: 490 ITNTPNFVPNSHYS----------SFDK-----RFSFKPTTTTYNILMKACCTDYYRVKA 534
+ +T + NS + DK P TTYNI++ C + KA
Sbjct: 525 MPSTITY--NSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKA 582
Query: 535 LM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
NEM P+ + IL+ G +E AL++ + G DVV Y T I
Sbjct: 583 FQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISS 642
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + A+ L EM+ ++ P+ TY ++ A + G + E ++
Sbjct: 643 LCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 58/356 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
I+ ++ N N+ N+LMN ++ + +V K+ KLGV+ + S+NIL+
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL ++ V + G + D +Y+TI+ + Q A + DM S
Sbjct: 222 GYCLESK---VKDALDWVNKMSEFGCVP-DTVSYNTILDALLKRRLLQEARDLLLDMKSK 277
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G++PN T++ L+ GL+++A + E M + P N+L+ + D A
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
FR+ +D+ ++ +
Sbjct: 338 FRI-----------------------------RDEM------------------EKMNVL 350
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C D V +L+ EM G+ N +++ I++ GN+ A
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT 410
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
L M E+G+SPD V Y T I ++ ++ +AF + +EM ++ + T T+L
Sbjct: 411 LDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILH 466
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 112/604 (18%), Positives = 228/604 (37%), Gaps = 125/604 (20%)
Query: 52 VHSSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASML 111
+ ++ LL + LS Y + + G L+E ++E +++ N+ ++
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIE--IMTRNNL--LPTVW 319
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV 171
+ M+ +G +G+ID + ++ ++ V P D + L + C + DS EV
Sbjct: 320 TYNMLVNGFC---NDGKIDEAFRIRDEMEKMNVLP----DVVTYNTLIDGCSQWRDSSEV 372
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
+ +E+D++ + N N+ +++ C
Sbjct: 373 YSLI-------------EEMDKK----GVKCNAVTYNIILKWMC---------------- 399
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
KK ++ A D +++ SP+ T+I G K+ + +++ S+ + ++
Sbjct: 400 -KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458
Query: 292 YVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N++++ + K E Y + K G + D SY IL+ A ++
Sbjct: 459 WTLNTILHCLCVEKKLD-EAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWD 517
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K + + TY++++ ++ A+ +ML G+ P+ T++ +I+
Sbjct: 518 EMKERQ----IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGF 573
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G VE+A EM++ +P+ CNILL+ ++A +LF T V+
Sbjct: 574 CLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFN------TLVSK 627
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+D D TYN ++ + C +
Sbjct: 628 GKDID-----------------------------------------VVTYNTIISSLCKE 646
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD---- 582
+ L+ EM L P+ ++ ++I A +G ++ A + M E G+ D
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLK 706
Query: 583 -------------------VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+AY+ I + K A LF E+ + N TY+
Sbjct: 707 LGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLN 766
Query: 624 LLRA 627
L+
Sbjct: 767 LMEG 770
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 58/306 (18%)
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA +I+ ++K L + L L T + + + +A +V +D + GV PNT ++
Sbjct: 158 LATQIFNKMKRLNYRPNL-LTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSF 216
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI V+ A+ +M + GC P++ N +L A ++ A
Sbjct: 217 NILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA--------- 267
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D + +M+ K PN H TYN+L
Sbjct: 268 --------------RDLLLDMKSK---------GLSPNKH---------------TYNML 289
Query: 522 MKACCTDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ C R+ L + + L P ++ +L++ G ++ A +I M
Sbjct: 290 VCGYC----RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PDVV Y T I C + + + +SL EEM ++ N VTY +L+ + G++
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405
Query: 636 EVQQCL 641
E L
Sbjct: 406 EATTTL 411
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 14/237 (5%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +F +M + PN CN L+ + V ++ + + + + K + LG + N+
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLV---RYPSSSSILLARQVLKDSIKLGVVPNTNS 215
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
I + + + + ++V F P T +YN ++ A +
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKM------SEFGCVPDTVSYNTILDALLKRRLLQEARD 269
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +M++ GLSPN ++ +L+ G ++ A ++++IM + + P V Y +
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +AF + +EM+ + P++VTY TL+ S++ EV ++ ++M K G
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEV---YSLIEEMDKKG 383
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V A L+ + + M++ G D+ + +L++ C AG
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ + ++ + + G N
Sbjct: 291 RLADAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++ ++A G V++A+ +F+EM Q G P N L+ ++A +F+RA LF
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ G +G T + N K +S+ + K P
Sbjct: 407 MNIH------GPTPNGYTHVLFINYHGKSGESLKALKRY-------ELMKSKGIVPDVVA 453
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ A K + +E++ +G+SP++I++T++I C + N + A++I M
Sbjct: 454 GNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E+ +PDV+A + I + ++ R +A+ +F E+K ++P TY TLL R G +
Sbjct: 514 ENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 636 EVQQCL 641
EV Q L
Sbjct: 574 EVMQLL 579
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 58/370 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
V+L +N+L+ V+ + E++ M++LG D +Y+++L A G ++
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA---MGKSMRI 817
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ + + KG K TY+TI+ +K A+ + ++S G +P T+
Sbjct: 818 EDMLKIQEEMHNKGY-KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGP 876
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G +E A LF+EML+ GCEPN NILL A ++ LF S
Sbjct: 877 LLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV--- 933
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+Q + P +Y +++
Sbjct: 934 -----------------------EQGMN---------------------PDIKSYTVVID 949
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D L ++ +GL P+ I++ +LI G SG +E AL + M + G++P
Sbjct: 950 TLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS +
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS---PENAF 1066
Query: 642 AVYQDMWKAG 651
A Y M G
Sbjct: 1067 AAYGRMIVGG 1076
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 186/433 (42%), Gaps = 41/433 (9%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + + +D ++ + N+ T+ G+ G + ++
Sbjct: 104 CNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMK 163
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + ++VYK M GV+ + +Y++L+ A G
Sbjct: 164 EAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAF---GKRR 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + G + +EA+GV + +V++Y+ ++V A + A ++ M G P+ +T
Sbjct: 221 DAETVVGLLGEMEARGV-RPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTN 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M + +P+ LL C ++ S ++
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD---------SRSV 330
Query: 462 SKTQVALGED--------YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
S+ AL D Y D + + D+ FD K+
Sbjct: 331 SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEA-------------LDVFDEMKQKGI 377
Query: 512 KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P +YN L+ + R L N M G +PN + + I+ G SG AL+
Sbjct: 378 IPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALK 437
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++M+ G+ PDVVA + ++ RL A +F E+K I P+ +TY +++ S
Sbjct: 438 RYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCS 497
Query: 630 RYGSLHEVQQCLA 642
+ + E + A
Sbjct: 498 KASNADEAMKIFA 510
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 184/426 (43%), Gaps = 60/426 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S ++A K + N+ +D G ++ ++++
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A MA +V ++ + G++P+ I
Sbjct: 432 SLKALKRY---ELMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + +PT TYN
Sbjct: 548 -----------------------------------------------KEMNLEPTDCTYN 560
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ M + PN I++ ++D +G V AL +L M +
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG----S 633
G PD+ +Y T + V+ RL +AF +F +MK + P+ T T+L + R G +
Sbjct: 621 GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEA 679
Query: 634 LHEVQQ 639
LH V++
Sbjct: 680 LHTVRE 685
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 64/348 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 752 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 805
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 806 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 866 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 890
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 891 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKG 1041
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN I +++ I GD K ++E + Q + +I + +++ D + L
Sbjct: 904 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 963
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 1019
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 432 NS 433
NS
Sbjct: 1080 NS 1081
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++ C G + K L G L+ D+ TY+ ++ + + AL +
Sbjct: 945 TVVIDTLCADGRL---NDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++ +
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060
Query: 448 QFDRAFRLF 456
+ AF +
Sbjct: 1061 SPENAFAAY 1069
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 40/176 (22%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY++LM A D V L+ EM G+ PN S+TI I G +G +E A +I
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263
Query: 571 LKIMREDGMSPDVVA-----------------------------------YTTAIKVCVR 595
L+ M E+G PDVV Y T + C
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S + ++ +K N+V+Y + A + G V + L V+ +M + G
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVG---RVDEALDVFDEMKQKG 376
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 997
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 998 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 1053
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 1054 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ V N+Y + + V +F ++ M+ G D+ ++ ++++ C AG
Sbjct: 238 EMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAG 297
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A++++ ++K + K D TY T++ D+ Q +++ M++ G N
Sbjct: 298 RLSDAKDVFWKMKASDQKP----DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNI 353
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++++++A G +++A+ +F+EM + G P N L+ ++A FDRA LF
Sbjct: 354 VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNH 413
Query: 459 WTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
A G +G T + N K QS+ + H K P
Sbjct: 414 MN------ACGPSPNGYTHVLFINYYGKSGQSLKAIQRY---EHM----KSKGIVPDVAA 460
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N ++ + K + E++ +G+SP+ I++T++I C + + A+ M
Sbjct: 461 ANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMV 520
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G PDV+A + I + + +A+ LF ++K +I+P TY TLL R G +
Sbjct: 521 ETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVK 580
Query: 636 EVQQCL 641
EV L
Sbjct: 581 EVMHLL 586
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 188/427 (44%), Gaps = 56/427 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A + N+ ++D G ++ A++++
Sbjct: 319 VTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDE 378
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + ++ Y +NSL++ + A LE++ +M G + ++ + + +G
Sbjct: 379 MKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 438
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y +H+++KG++ DV + ++ A + MA +V ++ GV+P+TI
Sbjct: 439 SLKAIQRY---EHMKSKGIVP-DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTI 494
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM+ F +M++ GC P+ N L+ + + + A++LF
Sbjct: 495 TYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQL 554
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K +PT TYN
Sbjct: 555 -----------------------------------------------KEMKIEPTNGTYN 567
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM PN I++ ++D +G V A+ +L M E
Sbjct: 568 TLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G +PD+ +Y T + ++ +R ++AF +F +MK + P+ T T+L + + G + E
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEA 686
Query: 638 QQCLAVY 644
+ Y
Sbjct: 687 LHTVKEY 693
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 134/613 (21%), Positives = 252/613 (41%), Gaps = 134/613 (21%)
Query: 71 NDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRID 130
N Y + S L ++G+++E ++E + S ++++ V + K+ G ++
Sbjct: 563 NGTYNTLLSGLGREGKVKEVMHLLEEMTHS----IHPPNLITYNTVLDCLSKN---GEVN 615
Query: 131 CVVGVLKKLNELGVAP-LELFDGSGFKLLKNE---------CQ--RLLDSGEVEM----- 173
C +G+L + E G P L ++ + L+K E CQ ++L +
Sbjct: 616 CAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILP 675
Query: 174 -FV--GLM-EVLEEFRLPVKELD-----EEFR-IVQLCVNKPDVNLAIRYACIVPRADIL 223
FV GLM E L + + + D F +++ +NK V +I +A + IL
Sbjct: 676 SFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGIL 735
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+F ++C I +C +++ ++ +
Sbjct: 736 LNDF-----------------------------FLCPLIRHLCK-HKKALEAHQLFNKFK 765
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+L +NSL+ V+ + + +++ M++LG D +YN++L A G ++
Sbjct: 766 GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA---MGKSM 822
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ + KG V TY+TI+ +K + A+ + +++S G +P T+
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYV-TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTY 881
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
L++ AG + A +LF EML+ GC+PN NILL
Sbjct: 882 GPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLN-------------------- 921
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G GNT+ + + K + N P +Y +L
Sbjct: 922 -------GHRIAGNTENVCQIFEKMVEQGIN--------------------PDIKSYTVL 954
Query: 522 MKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ CT Y+R ++ +GL P+ I + +LID G S +E A+ +
Sbjct: 955 IDTLCTAGRLNDGLSYFR------QLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNE 1008
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ G+ P++ Y + I ++ + +A ++EE+ +PN+ TY L+R S GS
Sbjct: 1009 MKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGS 1068
Query: 634 L---HEVQQCLAV 643
+ C+AV
Sbjct: 1069 TDNAYAAYDCVAV 1081
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ TY++LM + D V L+NEM G+ PN S+TI I G + + A QI
Sbjct: 211 PSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQI 270
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G PDVV +T I+V + RL A +F +MK +P+ VTYITLL +
Sbjct: 271 LGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLL---DK 327
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G + Q + ++ M G
Sbjct: 328 CGDSGDSQSVMEIWNAMVADG 348
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 176/474 (37%), Gaps = 57/474 (12%)
Query: 216 IVPRADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
IVP D+ N V + L A R + K SP+ +I C +
Sbjct: 454 IVP--DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADE 511
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ + D+ ++ NSL++ K +++ ++++ + +YN LL
Sbjct: 512 AMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLS 571
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G + E+ H + ++ TY+T++ + A+ + M
Sbjct: 572 GLGREGKVKEVMHLLEEMTH----SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++++ E+A +F +M + + C I L + V+ A
Sbjct: 628 GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTI-LPSFVKNGLMKEA 686
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISN---MEH-KDKQSITNTPNFVPN--------- 499
+ + L D NTD+ S ME +K + + F N
Sbjct: 687 LHTVKEYILKA---------DCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLN 737
Query: 500 ------------SHYSSFD--------KRFSFKPTTTTYNILMKACCTDYY--RVKALMN 537
H + + K T +YN L++ + + L
Sbjct: 738 DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFT 797
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ +G P+ ++ +++DA G S +E L++ M G V Y T I V+SK
Sbjct: 798 EMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSK 857
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL+QA L+ + P TY LL + G + + + ++ +M + G
Sbjct: 858 RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAEN---LFNEMLEYG 908
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR G+S N ++ LI SG A+++ K M EDG+SP V Y+ + + +
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ L EM+ ++PN+ +Y +R + E Q L +D
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMED 276
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 42/202 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++ I +ID G ++ ++ +++ + + N+Y +NSL+ L + K
Sbjct: 981 PDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLI----------LHLGK 1030
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
AG A ++Y E L KG K +VFTY+ +++ +
Sbjct: 1031 -----------------------AGKASEAAQMYEE---LLIKG-WKPNVFTYNALIRGY 1063
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A D ++ GV+ T +LI+ + L+ A LF EM + GC P+
Sbjct: 1064 SVSGSTDNAYAAY-DCVAVGVSLKT----ALISGLVDENLINIAEGLFAEMKRRGCGPDQ 1118
Query: 434 QCCNILLQACVEACQFDRAFRL 455
N++L A ++ + + ++
Sbjct: 1119 FTYNLILDAIGKSMRIEEMLKV 1140
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 226/533 (42%), Gaps = 88/533 (16%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
REGR+ V +L ++ E G+ P ++ G+ ++ C+ G+ + L+ +EE
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGT---IVDGMCKM----GDTVSALNLLRKMEEV 241
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
RI KP+V + Y+ I+ D L+ + G++ D A +
Sbjct: 242 S----------RI------KPNV---VIYSAII---DGLWKD-----GRQTD---AQNLF 271
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
++ SPN++ +I+ G C G + +++ + ++ + ++ ++ F+ L+N
Sbjct: 272 SEMQEKGISPNLFTYNCMIN--GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALV 329
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ KF E+Y M G++ + +YN ++ A+ ++ +L A
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF----YLMATKGCS 385
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV T+S ++ + AK +K+ +M G+ NTIT+++LI+ G + A+ L
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+EM+ +G PN CN LL + A +F+ SK + ++
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN------- 498
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+P TYNIL+ + + + L E
Sbjct: 499 -----------------------------DVEPDVQTYNILICGLINEGKFSEAEELYEE 529
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL P+ I++ +ID ++ A Q+ M G SPDVV +TT I + R
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +F EM I N +TY TL+ + G+++ L ++Q+M +G
Sbjct: 590 VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA---LDIFQEMISSG 639
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 170/414 (41%), Gaps = 60/414 (14%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
+ID C + G ++ +++ + + + NIY F L+ + L F L +
Sbjct: 76 VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFG 135
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+ KLG + +++ LL C+ A + ++ K +V ++T++
Sbjct: 136 KITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI--------CKPNVIAFTTLMNGL 187
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPN 432
A+ + + M+ G+ PN IT+ ++++ G A++L +M + +PN
Sbjct: 188 CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPN 247
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
++ A ++ D G D + S M+ K
Sbjct: 248 V----VIYSAIIDGLWKD------------------GRQTDAQ-NLFSEMQEKGISPNLF 284
Query: 493 TPNFVPNSHYSS-------------FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
T N + N SS F+++ S P T+++L+ A + ++ + L N
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMS--PDVVTFSVLINALVKEGKFFEAEELYN 342
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ PN I++ +ID ++ A ++ +M G SPDV+ ++ I +K
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ L EM + N +TY TL+ + G+L+ L + Q+M +G
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA---LDLLQEMISSG 453
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 193/445 (43%), Gaps = 74/445 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+ID+ G +++ + E + + L+I +++L+ H + ++ +MQKLG
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEV----------------------------- 350
D +Y L+K C GN A +++ E+
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 351 ---------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
K ++A+G++ DV +Y+T++ F + W+ A + +ML G+ P+ T
Sbjct: 317 REDEARELFKEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-- 459
S LI+ G V +A L E ++Q GC P+ C L++ + +A +LF
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Query: 460 ------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSF------ 505
++ + G GN +I+ HK+ S T+ N PN+ S
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNI-KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 506 ------DKRFSFK--------PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+ R FK P +Y L+ C + K L NEM +G+ P+
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++++LID G V A ++L++M + G P+ V YTT +K + R+ +A LF +M
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL 634
+ P++VTY TL++ + G++
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNI 639
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 185/433 (42%), Gaps = 76/433 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--N 290
KK ++ A + + + P++ C T++ G+C + S+A L+ Q + N
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK--GLCMKHRISKATQLFLKMQKLGCMPN 441
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQK------LGVMADMASYNILLKACCLAGNTVL 342
+ +LM + ++K LE++KNM + + SY+I++ C G
Sbjct: 442 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 501
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+E++ E+K L GV+ DV +Y++++ F + W+ A + +M+ GV P+ T+S
Sbjct: 502 ARELFKEMKAL---GVIP-DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LI+ G V +A L E M+Q GC PN+ L++ + A +LF
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM--- 614
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ P TY LM
Sbjct: 615 --------------------------------------------QKLGCLPDVVTYGTLM 630
Query: 523 KACC------TDYYRVKALMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQILKIM 574
K C T K ++++ G P+ IS++I+ID G + A ++ K M
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ P+V++YT+ I RS +L+ A LF EM +Q N VTY ++ + G +
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750
Query: 635 HEVQQCLAVYQDM 647
+ A++Q M
Sbjct: 751 DK-----ALFQKM 758
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 186/463 (40%), Gaps = 94/463 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + ++
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ +M+KLG D +Y L+K C G +A ++ E+
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 351 -----------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
K ++A+G++ DV +Y++++ F + W+ A + +ML G
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ + T S LI+ G V +A L E M+Q GC + + L++ + A
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246
Query: 454 RLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
RLF S +A G G T I+ ++ + +T +
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRY-----------G 295
Query: 509 FSFKPTTTTYNILMKACCTD-------------------------------------YYR 531
KPT +Y+I++ C D + +
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K L NEM VG+ P+ + ++LID G V A ++L+++ + G PDVV TT +K
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R+ +A LF +M+ PN+VT TL++ + G++
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 458
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 56/301 (18%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
ML G+ P+ T LI+ G V +A L E M+Q GC + + L++ +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 449 FDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A +LF S +A G G T +I+ H ++ + +T S Y
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT------SQYG 114
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----------------------------------- 528
KPT +Y+I++ C D
Sbjct: 115 -----IKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRS 169
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + K L NEM VG+ + + ++LID G V A ++L++M + G D+V Y
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+T IK R+ +A LF M+ +P+ + Y TL++ + G+++ L ++Q+
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA---LQLHQE 286
Query: 647 M 647
M
Sbjct: 287 M 287
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K DV TY+ I+ A W+ A+ +
Sbjct: 154 YNMMIRLHARHNRTDQARGLFFEMQEWRCKP----DVETYNAIINAHGRAGQWRWAMNIM 209
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DML A + P+ T+++LINAC ++G ++A+++ ++M + G P+ NI+L A
Sbjct: 210 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSG 269
Query: 447 CQFDRA---FRLFRSWTLSKTQVALG---------EDYDGNTDRISNMEHKDKQSITNTP 494
Q+ +A F L + + L YD + ++M K + TP
Sbjct: 270 AQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSEC---TP 326
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ V T T I + + C +A N M GL PN +S+ L
Sbjct: 327 DVV-----------------TFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNAL 369
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A G A ++++G PD+V+YT+ + RS++ +A +F+ MK ++
Sbjct: 370 IGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKL 429
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PNLV+Y L+ A YGS + + + ++M + G
Sbjct: 430 KPNLVSYNALIDA---YGSNGLLADAIKILREMEQEG 463
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 24/319 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ SYN L+ A G A + E+K + + D+ +Y++++ + ++
Sbjct: 358 GLKPNIVSYNALIGAYAARGMDNEAHLFFNEIK----QNGFRPDIVSYTSLLNAYGRSQK 413
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++ + M + PN +++++LI+A + GL+ A+ + EM Q G +PN
Sbjct: 414 PHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICT 473
Query: 439 LLQAC---VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
LL AC + D + VA Y+ N+ DK
Sbjct: 474 LLAACGRCSRKVKIDTVLTAAEMRGIKLNTVA----YNAAIGSCMNVGEYDKAI------ 523
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
Y S K+ K + TY +L+ CC + Y + M E+ + L + ++
Sbjct: 524 ----GLYKSMRKK-KIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSS 578
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
I A G + A +M+ G PDVV YT + ++ ++A++LFEEM+
Sbjct: 579 AICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASS 638
Query: 614 IQPNLVTYITLLRARSRYG 632
I+ + + L+R+ ++ G
Sbjct: 639 IKLDTIACAALMRSFNKGG 657
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 169/398 (42%), Gaps = 36/398 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 219 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSY 278
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ A EI+ ++ E K DV T+++I+
Sbjct: 279 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMR--EKKSECTPDVVTFTSIIH 336
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + M++ G+ PN +++++LI A A G+ +A F E+ Q G P
Sbjct: 337 LYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRP 396
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDYDGN---TDRISNM 482
+ LL A + + +A ++F +K + AL + Y N D I +
Sbjct: 397 DIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKIL 456
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+++ I +P + L+ AC C+ ++ ++
Sbjct: 457 REMEQEGI---------------------QPNVVSICTLLAACGRCSRKVKIDTVLTAAE 495
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ N +++ I +C G + A+ + K MR+ + D V YT I C + +
Sbjct: 496 MRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYG 555
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+A S EE+ H ++ + Y + + A S+ G + E +
Sbjct: 556 EALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAE 593
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G L A++ ++ PN+ T++ CG C +K + +
Sbjct: 439 LIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRG 498
Query: 287 VTLNIYVFN----SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ LN +N S MNV +D L YK+M+K + D +Y +L+ CC
Sbjct: 499 IKLNTVAYNAAIGSCMNVGEYDKAIGL--YKSMRKKKIKTDSVTYTVLISGCCKMSKYGE 556
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ HL+ L L YS+ + ++ A M S+G P+ +T++
Sbjct: 557 ALSFMEEIMHLK----LPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYT 612
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++A A E+A LFEEM + + ++ C L+++ + Q R L S
Sbjct: 613 AMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAES 668
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 215/490 (43%), Gaps = 54/490 (11%)
Query: 184 FRLPVKE----LDEEFRIVQLCVNKPDVN-LAIRYACIVPRADILFCNFVREFGKKRDLV 238
+RLP + L + + C N+ + LA+ + + ++F VR + + +
Sbjct: 104 YRLPSPKPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPN 163
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + K+ PN+ C ++ + + +Y ++ N+ ++Y FN ++
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223
Query: 299 NV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
NV LK E +M+ LGV ++ +YN ++ CL G A+ I+ +K K
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD---K 280
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+ D +TY++ + + A + ML G+ PN +T+++LI+ N G +++
Sbjct: 281 G-LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +EM+ G + N+ + A LF + G+
Sbjct: 340 AYAYRDEMISKGIMASLVTYNLFIHA------------LFMEGRM------------GDA 375
Query: 477 DR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKA 524
D I M K T N + N + D + +F +PT TY L+
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R+K AL ++++ GL P+ I + LID +GN++ A Q+LK M + P
Sbjct: 436 L-GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D + Y T ++ R ++++A L +EMK I+P+ ++Y TL+ S+ G +++
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG---DMKDAF 551
Query: 642 AVYQDMWKAG 651
V +M G
Sbjct: 552 RVRDEMMTTG 561
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 149/375 (39%), Gaps = 66/375 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------------- 299
PN+ TII + G + ++R I++ ++ + + + Y +NS ++
Sbjct: 249 PNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGL 308
Query: 300 -----------------------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
N DL M G+MA + +YN+ + A +
Sbjct: 309 ICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM 368
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A + +K + KG++ D T++ ++ + + A + ++M+ G+ P
Sbjct: 369 EGRMGDADNM---IKEMREKGMMP-DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T++SLI +++A LF ++ Q G P+ N L+ DRAF+L
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484
Query: 457 RSWTLSK------TQVALGEDY--DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ K T L + Y +G + + + K+ + N+ S + KR
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
Query: 509 ---------------FSFKPTTTTYNILMKACCTDY--YRVKALMNEMRTVGLSPNHISW 551
F PT TYN L++ C + + L+ EM + G++P+ ++
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604
Query: 552 TILIDACGGSGNVEG 566
+I+A ++EG
Sbjct: 605 LSIIEAMETVDDLEG 619
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 384 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + + +R + KP TYN
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTL-------------------FEMMIQR-NLKPDVVTYNT 539
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 694
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 168/377 (44%), Gaps = 65/377 (17%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 194 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 253
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 254 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 309
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 366
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 367 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 395
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 396 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 440
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500
Query: 620 TYITLLRARSRYGSLHE 636
T+ TL+ S+ G++++
Sbjct: 501 TFTTLINGYSKDGNMNK 517
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP + F + K L AL+ + K +P+ I +I G C + + S
Sbjct: 390 VVPDL-VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMS 446
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
A + +++ Q L++ +N+++N + L E++ M + GV D ++ L+
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN A ++ + + LK DV TY+T++ F + ++ DM+S
Sbjct: 507 NGYSKDGNMNKAVTLF----EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 562
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ PN I++ LIN N G V +A L++EM++ G E CN +++ A +
Sbjct: 563 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 622
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A + +SNM K
Sbjct: 623 A-----------------------DEFLSNMLLK------------------------GI 635
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + R AL+N+M GL P+ I++ ++++ G ++ A
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 695
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
I+ M E G++PD YT+ I V LK+AF + +EM P+
Sbjct: 696 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 174/430 (40%), Gaps = 58/430 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 303
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 304 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K P Y
Sbjct: 421 -----------------------------------------------KNAGLAPDNVIYT 433
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ C + +AL +EM G + +++ +++ + A ++ M E
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD +TT I + + +A +LFE M ++P++VTY TL+ + + +V
Sbjct: 494 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 638 QQCLAVYQDM 647
+ ++ DM
Sbjct: 554 NE---LWNDM 560
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 156/366 (42%), Gaps = 58/366 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N VF+ L+ V A L+ E ++ ++ G+ + + N LL G LA EIY
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
EV + ++++V+T + ++ + + DM GV P+ +T+++LINA
Sbjct: 243 QEV----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
GL+E+A L + M G +P N ++ + ++ RA
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA--------------- 343
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G D + + P T TYNIL+ CC
Sbjct: 344 -----KGVLDEM---------------------------LKIGMSPDTATYNILLVECCR 371
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + A + +EM + G+ P+ +S++ LI +G ++ AL+ + M+ G++PD V
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I R+ + +A + +EM ++VTY T+L + L E + ++
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE---LFT 488
Query: 646 DMWKAG 651
+M + G
Sbjct: 489 EMTERG 494
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 502 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 559
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 678
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 679 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 739 GFVPDDK 745
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 188/410 (45%), Gaps = 23/410 (5%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
D + HL S PN+ +I ++ + E++R + N+ +N L++
Sbjct: 164 DGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ +V K M + G ++ ++N L+ C GN A+++ G + AKG
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG---IMVAKG- 279
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ +V TYS ++ ++ + A +V E+M + GVTP+ T+S+LI+ A +E+A
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ M +GC P+ + ++ A ++ + A + + + + Y+ D
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV-VTYNTVIDG 398
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ + + + + P TY+ ++ C V+A L+
Sbjct: 399 LCKLGKIAEAQVI----------LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G +P+ +++T +ID G +E A +L+ M+ G +P+VV YTT I ++
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+++ +A + EEM++ PNLVTY T++ G + E QQ + +D
Sbjct: 509 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 56/348 (16%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
NA DL LE+ + M+ G D ++ ++ A AG+ + G + HL + G
Sbjct: 124 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD------LDGAMDHLRSMGC-D 176
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ FA AK + A+K+ E+M G PN +T++ L++A +V A +
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
++M++ G PN N L+ + D A +L VA G
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL------GIMVAKG----------- 279
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+P TY+ L+ C + K ++ E
Sbjct: 280 ------------------------------MRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+T G++P+ +++ LI + +E A Q+L+ M G +PDVV Y++ I +S +
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L +A +EM+ + P++VTY T++ + G + E Q L Q+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 52/282 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV +Y+ ++ F +A AL++ E+M SAG P+ T + +I A ANAG ++ AM
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M GC+PN L+ A A + + A +L
Sbjct: 171 RSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLE------------------------ 203
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
E +++ PN V TYN+L+ A C + + ++ +M
Sbjct: 204 -EMRERGC---PPNLV-------------------TYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G +PN +++ L+D GNV+ A ++L IM GM P+VV Y+ I +S++
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+A + EEMK + P+ TY L+ + + E +Q L
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 157/367 (42%), Gaps = 64/367 (17%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C +++++ + E+++++ VT + + +++L++ A ++
Sbjct: 282 PNVVTYSALID--GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M G D+ Y+ ++ A C +G + AQ+ E++ K DV TY+T+
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR----KQRKSPDVVTYNTV 395
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ A + E M +G V P+ +T+S++IN + ++ +A L + M +AG
Sbjct: 396 IDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 455
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ ++ + + + A L +
Sbjct: 456 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM----------------------------- 486
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
KR P TY L+ C + +M EMR G P
Sbjct: 487 ------------------KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGM---SPDVVAYTTAIKVCVRSKRLKQAF 603
N +++ +++ SG ++ A Q+++ M+ DG SPD Y T + + S +++A
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSSDLVQEAE 587
Query: 604 SLFEEMK 610
L E+MK
Sbjct: 588 QLLEQMK 594
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + + F K L+ A + +K SP++ T+ID G+C G +++ I
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID--GLCKLGKIAEAQVIL 412
Query: 280 EDLR-SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E ++ S +V ++ +++++N + L ++ M K G D+ +Y ++ C
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ + +K + +V TY+T++ A+ A +V E+M +AG P
Sbjct: 473 CGRLEEAEYLLQGMK----RAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML--QAGCEPNS 433
N +T+++++N +G +++A L + M +A C P++
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 567
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 169/398 (42%), Gaps = 35/398 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +RA+ +++ V LN +NSL++ V D E+ + M+ G+
Sbjct: 139 VDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGI 198
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
A + +Y IL+ + AG+ + + E+K G DV+ Y+ ++ + A +
Sbjct: 199 EATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG----DVYLYTAVINAYCRAGNVR 254
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ LIN G +E A L +M G N N ++
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTPN 495
D A ++ + K + L + Y NT R++ M
Sbjct: 315 DGYCRQGMVDNALKV--KAAMEKMGIEL-DVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
VP P TY L+ C D + L EM G P+ +++ +
Sbjct: 372 GVP--------------PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNV 417
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D G++ A + K M + G+ PDV Y + + + ++ A LFEEMKH
Sbjct: 418 MMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRG 477
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN+V Y L+ ++ G E Q +Y DM KAG
Sbjct: 478 TEPNVVAYTALISGLAKEGRSEEAFQ---LYDDMLKAG 512
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 139/333 (41%), Gaps = 20/333 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
++D GD K A+ ++++++NV ++Y++ +++N A +++ EV+ G
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + +Y +L+ C G A+ + + ++ +GV + ++T++ +
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLAD---MQGRGVGHNQII-FNTMIDGYCRQGMV 323
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
ALKVK M G+ + T+++L + +A L M++ G PN L
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + A RLFR K + Y+ D + K SI F
Sbjct: 384 ISIHCKEGDMVEARRLFREMA-GKGAMPSVVTYNVMMD-----GYIKKGSIREAERF--- 434
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+K+ P TY L+ C + A L EM+ G PN +++T LI
Sbjct: 435 --RKEMEKK-GLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
G E A Q+ M + G++PD Y+ +
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I+F + + ++ + +AL+ A +K ++Y T+ CG+C +++ +
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL--ACGLCRVNRMAEAKTLL 365
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + V N + +L++++ D+ +++ M G M + +YN+++
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ A+ K +E KG++ DV+TY+++V +ALK+ E+M G PN
Sbjct: 426 GSIREAERFR---KEMEKKGLVP-DVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPN 481
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ +++LI+ A G E+A L+++ML+AG P+ + L+
Sbjct: 482 VVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 255 NMYICRTIID-VC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVN-AHDLK 306
N I T+ID C G+ + +K +A E + + L++Y +N+L VN + K
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKM---GIELDVYTYNTLACGLCRVNRMAEAK 362
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L + M + GV + +Y L+ C G+ V A+ ++ E + KG + V TY
Sbjct: 363 TLLHI---MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFRE---MAGKGAMP-SVVTY 415
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEML 425
+ ++ + + A + +++M G+ P+ T++SL++ C N G V+ A+ LFEEM
Sbjct: 416 NVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVN-GKVDVALKLFEEMK 474
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G EPN L+ + + + AF+L+
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLY 505
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + GD +++R ++ ++ + ++ +N +M+ + ++
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K G++ D+ +Y L+ C+ G +A +++ E+KH +G + +V Y+ ++
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKH---RGT-EPNVVAYTALIS 490
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML AG+TP+ +S+L+ +
Sbjct: 491 GLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGS 526
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 177/387 (45%), Gaps = 34/387 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + V N+Y +N L+ L+ + V +M+ G + +YN L+
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C AG A+ + V + +G K ++ T++++V A + A KV ++M+
Sbjct: 196 AFCRAGELDGAERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +++++L++ G + +++ +F EM Q G P+ L+ A +A ++A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 453 FRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KR 508
L R L +V DG + F+ ++ + + ++
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKK----------------GFLDDALLAVEEMRK 356
Query: 509 FSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+P+ YN L+ C D R L+ EM + P+ ++++ +I GN+
Sbjct: 357 CGIQPSVVCYNALINGYCKLGRMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A Q+ + M + G+ PD + Y++ I+ KRL A LFE M +QP+ TY TL
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G+ V++ L+++ +M + G
Sbjct: 475 IDGHCKEGN---VEKALSLHDEMIRKG 498
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 37/386 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R + + + G GN D
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 420 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
K+A L ++ H P+ + Y L+
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + ML GV PN T++ L+ A G +E+A+ +
Sbjct: 118 VPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN+ N L+ A A + D A R L R +K + +
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKAL 535
ME K FD+ R P +YN L+ C + A+
Sbjct: 237 GRMEGARK----------------VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM GL P+ +++T LI A +GN+E A+ ++ MRE G+ + V +T I +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
L A EEM+ IQP++V Y L+ + G +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 507
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 588 TAIK 591
+ ++
Sbjct: 628 SLVR 631
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++R + ++ +N+L+N + E+ + M+ V D+ +Y+ ++ C
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ + + KGVL D TYS++++ + K A ++ E+ML GV P+
Sbjct: 412 GNLDSAFQLN---QKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-F 456
T+++LI+ G VE+A+ L +EM++ G P+ ++L+ ++ + A RL F
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------S 510
+ + + V YD S E K ++ F DK + +
Sbjct: 528 KLY--HEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDRN 583
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT---------------- 552
+K + Y+IL+ C KAL +M G SPN S
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643
Query: 553 -------------------ILIDACGGSGNVEGALQILKIMREDGMSP 581
LID GNV+ + +L M DG+ P
Sbjct: 644 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 411 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 459
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 460 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 578 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 634 FEEGMVVEADNAIQDLL 650
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G +P+ ++ ++ A ++ A + L M G++P+V Y ++ RL++A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ +M+ PN VTY TL+ A R G L ++ +++ ++ A
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA 219
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 171/373 (45%), Gaps = 31/373 (8%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ FN+L++ K ++++ M K+G D+ +Y+ ++ C GNT +A ++
Sbjct: 10 LVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL-- 67
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +E KG K +V Y+TI+ + A+ +M+ G+ P+ T+SS+++
Sbjct: 68 -LKKMEEKGC-KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK----- 463
N G V +A LF++M++ PN IL+ + A+ +F + T
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 464 -TQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK------- 507
T AL + Y D + M+ K + N + N H S D+
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 508 --RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S P TY+ LM+ C + L+ EM + GL PN I+++I++D G+
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A ++LK M+E + P++ YT I+ +L+ A LF + IQP +VTY
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Query: 624 LLRARSRYGSLHE 636
++ + G +E
Sbjct: 366 MISGLLKGGLSNE 378
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 29/315 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+ + T++T++ A+K+ ++M+ G P+ IT+S++IN G A+
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
L ++M + GC+PN N ++ + + A F + G
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSF------DKRF--------------SFKP 513
N R++ KQ + N +PN + KR +P
Sbjct: 126 CNLGRVNEATSLFKQMVER--NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + L N M G +PN S+ ILI+ SG ++ A +L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++PD+ Y+T ++ + R ++A L +EM Y + PNL+TY +L ++
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 632 GSLHEVQQCLAVYQD 646
G L E + L Q+
Sbjct: 304 GHLDEAFELLKAMQE 318
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ +PT T+N L+ C+ + A L +EM +G P+ I+++ +I+ GN
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
ALQ+LK M E G P+VVAY T I + + + +A F EM I P++ TY ++L
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 626 RARSRYGSLHE 636
G ++E
Sbjct: 123 HGFCNLGRVNE 133
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 119/251 (47%), Gaps = 13/251 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ + +PN+ +I+ G +++ + ++ +++T +I+ +++LM
Sbjct: 204 AQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMR 263
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E+ K M G++ ++ +Y+I+L C G+ A E+ ++ E+K
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ--ESK- 320
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ ++F Y+ +++ + A ++ ++ G+ P +T++ +I+ GL +A
Sbjct: 321 -IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
LF EM GC PNS N+++Q + A RL V G D +T
Sbjct: 380 CELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM------VGKGFSADSSTF 433
Query: 478 R-ISNMEHKDK 487
R +S++E D+
Sbjct: 434 RMLSDLESSDE 444
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M +GL P +++ L+ + A+++ M + G PDV+ Y+T I +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L ++M+ +PN+V Y T++ + + V + + + +M K G
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKD---RLVTEAMDFFSEMVKEG 110
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 233/538 (43%), Gaps = 99/538 (18%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + ID V+G+LK++ LG+ P + + +G +++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 282 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFEKMKTGRHKPD---RVT 330
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 331 YITLLDR-----------FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 496
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ GCEP+ N L+ +A +
Sbjct: 497 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 555 DEAWKMFMRM-----------------------------------------------KEM 567
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 171/385 (44%), Gaps = 35/385 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 304 CTARKLDCAKEVFEKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
LF + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 480 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+G PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G ++Q+ + +++ M + G
Sbjct: 582 GLGKNG---KIQEAIELFEGMVQKG 603
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 41/347 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH G L + TY+ ++
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + S G P+ T++ L++A +G +++ L++EM CE N+
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 913
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
++ +P YNIL+ KA D AL M G+
Sbjct: 914 FEGMLDY-------------GCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 958
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L K ++E G++PDVV Y I +S RL++A L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EMK + I P+L TY +L+ G + E + +Y ++ +AG
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAG 1062
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 61/384 (15%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G E+Y E+ E + + T++ ++ A AL + D++S
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEA----NTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE ML GC PN NIL+ +A + D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 944 AACALFKRMV--------------------------KEGV-------------------- 957
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P TY++L+ C + L E++ GL+P+ + + ++I+ G S +E AL
Sbjct: 958 -RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 569 QILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M+ G++PD+ Y + I + +++A ++ E++ ++PN+ T+ L+R
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
S G + + AVYQ M G
Sbjct: 1077 YSLSG---KPEHAYAVYQTMVTGG 1097
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 25/345 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + D +Y + K+ + G L Q Y K E VL + ++Y+ ++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGG--LKQAPYALRKMREFGFVL--NAYSYNGLI 195
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +++ A++V M+ G P+ T+SSL+ ++ M L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I ++ A + + A+ + + G D T I + K
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRM----DDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F+K + KP TY L+ D VK +EM G P
Sbjct: 312 AK----------EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++TIL+DA +GN A L +MR+ G+ P++ Y T I +R RL A LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ ++P TYI + YG + L ++ M G
Sbjct: 422 GNMESLGVKPTAYTYIVFI---DYYGKSGDSVSALETFEKMKTKG 463
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/495 (19%), Positives = 195/495 (39%), Gaps = 82/495 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 287 VTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +M + ++ +++ M + G D+ N L+ A A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ +K ++ LK V TY+T++ Q A+++ E M+ G PNTIT+++L
Sbjct: 559 KMFMRMKEMK----LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 405 INA-CANA----------------------------------GLVEQAMHLFEEMLQAGC 429
+ C N G V++AM F +M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------------------------------ 459
P+ LL V+A + A+++ ++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S+ VA G DG++ + + + K + + + + F K +P TYN
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSG----ARTLFEKFTKDLGVQPKLPTYN 789
Query: 520 ILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ D + + + ++++ G P+ ++ L+DA G SG ++ ++ K M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + + I V++ + A L+ + M P TY L+ S+ G L+E
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 637 VQQCLAVYQDMWKAG 651
+Q +++ M G
Sbjct: 910 AKQ---LFEGMLDYG 921
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK----ESGLNP 994
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + +++L+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N +H L+ L ++ M+ G+ D+ +YN L+ +AG A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1052 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 404 LIN 406
L N
Sbjct: 1108 LPN 1110
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 205/484 (42%), Gaps = 80/484 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 244 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 303
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 304 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 363
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 364 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 423
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 424 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 479
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 536
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 537 --------------------------------------------KEMNLEPTDGTYNTLL 552
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 553 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 613 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 671
Query: 641 LAVY 644
+ Y
Sbjct: 672 IKDY 675
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 171/414 (41%), Gaps = 53/414 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 205 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 241
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 242 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 292 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 347
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 348 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 401
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 402 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 454
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 568
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 177/407 (43%), Gaps = 71/407 (17%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 720 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 778
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 779 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 834
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 835 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 895 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 923
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGL 544
P +Y I++ C Y+R ++ +GL
Sbjct: 924 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFR------QLLEMGL 961
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A
Sbjct: 962 EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1021
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++EE+ +PN+ TY L+R S GS A Y M G
Sbjct: 1022 MYEELLTKGWKPNVFTYNALIRGYSVSGS---TDSAYAAYGRMIVGG 1065
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 175/428 (40%), Gaps = 24/428 (5%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + +D ++ + N+ I G+ G + ++
Sbjct: 93 CNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK 152
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + LEVY+ M GV+ + +Y++L+ A G
Sbjct: 153 EAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF---GKRR 209
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+ + ++ +EA GV K +V++Y+ ++V AK + A ++ M + G P+ IT
Sbjct: 210 DVETVLWLLREMEAHGV-KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 268
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M ++ +P+ LL + + W
Sbjct: 269 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI---WNA 325
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K DG D + F + ++ P +YN L
Sbjct: 326 MKA--------DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSL 376
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + L M G PN + + I+ G SG A+Q ++M+ G+
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 436
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVA + +S RL A +F E+K + P+ +TY +++ S+ E
Sbjct: 437 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA-- 494
Query: 640 CLAVYQDM 647
+ ++ DM
Sbjct: 495 -VKIFYDM 501
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ Y SP ++D G + ++ ++ N
Sbjct: 837 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 896
Query: 293 VFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+N + A + + ++++M G+ D+ SY I++ C AG + ++
Sbjct: 897 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 956
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L+ D+ TY+ ++ +K + A+ + +M G+ PN T++SLI
Sbjct: 957 LEMG----LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1012
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG +A ++EE+L G +PN N L++ + D A+ +
Sbjct: 1013 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1058
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
I G+ K +++D+ Q + +I + +++ A L L ++ + ++G+ D+
Sbjct: 907 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+L+ G + +E ++ KG++ +++TY++++ A A K+
Sbjct: 967 TYNLLIDGL---GKSKRLEEAVSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAEAGKM 1022
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
E++L+ G PN T+++LI + +G + A + M+ GC PNS
Sbjct: 1023 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1070
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ IID G + L + ++ +N L++ + L+ +
Sbjct: 927 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 986
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQK G++ ++ +YN L+ AG A ++Y E L KG K +VFTY+ ++
Sbjct: 987 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE---LLTKG-WKPNVFTYNALI 1042
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + A M+ G PN+ T+ L N
Sbjct: 1043 RGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 147/646 (22%), Positives = 258/646 (39%), Gaps = 126/646 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVE---------------SVVVSEGNVSKFASMLSL--EMV 116
Y M L K RL+E I E ++++ G+ KF SL
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365
Query: 117 ASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDG---------SGFKLLKNECQRLLD 167
A G + S+ +C++ L K LG A L F+ S + +L + L
Sbjct: 366 ARGCIPSVIA--YNCILTCLGKKGRLGEA-LRTFEEMKKDAAPNLSTYNVLID---MLCK 419
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLC-VNKPDVNLAIRYAC---IVPRADIL 223
+GEVE + + ++E L + I +LC K D +I I ++
Sbjct: 420 AGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVT 479
Query: 224 FCNFVREFGKKRDLVSALRAY----DASK------------------------------- 248
FC+ + GK+ + A R Y D+ K
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
SP++ + +D G+ K RA++E+++S+ ++ ++ L++ V A +
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
T E++ M++ G + D +YN + C +G A ++ E+K KG + V TY
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK---TKG-RQPTVVTY 655
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+++ A A + E+ S G+ N + +SSLI+ G +++A + EE++Q
Sbjct: 656 GSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 715
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN N LL A V+A + + A F+ NM
Sbjct: 716 KGLTPNVYTWNCLLDALVKAEEINEALVCFQ-----------------------NM---- 748
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
+++ TPN + TY+IL+ C + + EM+ GL
Sbjct: 749 -KNLKGTPNHI-------------------TYSILINGLCRVRKFNKAFVFWQEMQKQGL 788
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T +I +GN+ A + + + +G PD +Y I+ S+R +A+
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+FEE + + T I LL A + L + AV +++ K+
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKS 894
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 180/447 (40%), Gaps = 37/447 (8%)
Query: 220 ADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
ADI+ N + FGK + A + + K H P+ ++I V ++ I
Sbjct: 266 ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEI 325
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+E + Y +N+++ KF E Y +++ G + + +YN +L
Sbjct: 326 FEQMEQNRNVPCAYAYNTMIMGYGSAGKFD-EAYSLLERQKARGCIPSVIAYNCILTCLG 384
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + E+K A ++ TY+ ++ + A + A KV++ M AG+
Sbjct: 385 KKGRLGEALRTFEEMKKDAAP-----NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLF 439
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T + +I+ A +++A +FE M C P+ L+ + + D A+RL
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499
Query: 456 FRSW-------------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ +L K+ G DG+ M H+ N + +
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK-IFKEMIHRGCSPDLRLLNAYMDCVF 558
Query: 503 SSFD-----------KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHI 549
+ + K F P +Y+IL+ + L M+ G +
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ID SG V A Q+L+ M+ G P VV Y + I + RL +A+ LFEE
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
K ++ N+V Y +L+ + G + E
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDE 705
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 61/358 (17%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ +L +V D+ TL + MQ+LG + + +++ G A + E+K
Sbjct: 204 LIGALSSVQESDIMLTL--FHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMK- 260
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L D+ Y+ + F A MA K ++ S G+ P+ +T++S+I
Sbjct: 261 ---SNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+++A+ +FE+M Q P + N ++ A +FD A+ L
Sbjct: 318 RLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE--------------- 362
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
K + I P+ YN ++ C R+
Sbjct: 363 ----------RQKARGCI----------------------PSVIAYNCIL-TCLGKKGRL 389
Query: 533 KALM---NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ EM+ +PN ++ +LID +G VE A ++ M+E G+ P+V+
Sbjct: 390 GEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIM 448
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I ++K+L +A S+FE M H P+ VT+ +L+ + G + + + +Y+ M
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR---LYEQM 503
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 173/427 (40%), Gaps = 29/427 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ L +AL D K + ++ + ID G G + + ++
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + + S++ V + L +E+++ M++ + +YN ++ AG
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
E Y ++ +A+G + V Y+ I+ AL+ E+M PN T
Sbjct: 355 ---DEAYSLLERQKARGCIP-SVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLST 409
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ LI+ AG VE A + + M +AG PN NI++ +A + D A +F
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469
Query: 461 ---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPT 514
S +V DG R+ + +Q + + +PN+ Y+S K F FK
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK--IPNAVVYTSLIKSF-FK-- 524
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C + EM G SP+ +D +G + + +
Sbjct: 525 -----------CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI 573
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G PDV++Y+ I V++ ++ + LF MK + Y T + + G +
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633
Query: 635 HEVQQCL 641
++ Q L
Sbjct: 634 NKAYQLL 640
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P+T T L+ +C + L+ MR P ++T LI A +
Sbjct: 158 GFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIM 217
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
L + M+E G V +TT I+V R RL A SL +EMK + ++V Y
Sbjct: 218 LTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLY 271
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY+ + ++ EM G P+ + LI +C S + +++ MR+ P AYT
Sbjct: 145 DYF--EQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYT 202
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
T I + +LF +M+ + ++ + T++R +R G L
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 150/342 (43%), Gaps = 54/342 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N++ F L++ A D+ E+ K M + GV ++ +N+++K C A A E++
Sbjct: 876 NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E G DVFTYSTIV + A ++ EDM+S G +PN +T+SSL++
Sbjct: 936 ---KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG +++A L + M ++GC PN N ++ + + D A+ L
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL------------ 1040
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-C- 525
L E DG +P TY +L+ A C
Sbjct: 1041 LEEMVDGGC-----------------------------------QPNVVTYTVLLDAFCK 1065
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M G PN ++ L+D VE A Q+L M + G P+VV+
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y T I ++ ++ + L E+M P++VT+ T++ A
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 190/432 (43%), Gaps = 24/432 (5%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + K L A+R + + +PN++ T++ G C A
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH--GFCKANRVENA 284
Query: 278 IY--EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ E + ++ ++ + +++N + V M + G ++ +Y L+
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A E+ V+ + +G + + TY+ I+ VF + A +V + M+ G
Sbjct: 345 FCRVGDLDGAVEL---VRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ I +S++I+ AG + +A L E+M++ GC P+ C + L+ A +A D A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L R +++G D + S + H ++ + + P
Sbjct: 461 ELLR--------MSIGMDCAPDVVAYSILIH----ALCKAKRLPEAESWLDVMVKNRCYP 508
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN ++ C A L + MR G+ P+ ++++I+I + N++ A ++L
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+E PDVV Y+ I ++ + +AF +F+EM PNLVTY TL+ +
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628
Query: 632 GSLHEVQQCLAV 643
+ + + L +
Sbjct: 629 NKVEQAAEMLEI 640
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 187/406 (46%), Gaps = 38/406 (9%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
SPN+ +++ G+C G ++ A+ + + + NI +N++++ + L E
Sbjct: 980 SPNVVTYSSLLH--GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK-LGRIDE 1036
Query: 311 VYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
Y ++++ G ++ +Y +LL A C G A++ G V+ + KG + ++FTY+
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK---AEDAIGLVEVMVEKGYVP-NLFTYN 1092
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ +F + A ++ M+ G PN ++++++I A V + + L E+ML
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNM 482
C P+ N ++ A + + D A+ LF + + V G + R
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 483 EHKDKQSITN---TPNFVP--------------NSHYSSFDKRFS--FKPTTTTYNILMK 523
E+ ++ +P+ + + Y F + S P TY+I++
Sbjct: 1213 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ C + +A ++ M G P I++ LID +GN++ AL+IL+++ G P
Sbjct: 1273 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 1332
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DVV ++ I + RL+QA L E M + P+ VTY TLL+
Sbjct: 1333 DVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 1378
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 26/433 (6%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKS 275
VP+ IL ++ R L SAL + ++ S P+++ TI+D G +
Sbjct: 908 VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ED+ S+ + N+ ++SL++ A L + + M + G ++ +YN ++
Sbjct: 968 CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A + E+ G + +V TY+ ++ F + A+ + E M+ G
Sbjct: 1028 HCKLGRIDEAYHLLEEM----VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++SL++ VE+A L M+Q GC PN N ++ +A +
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSF 511
L LS V ++ D + D Y F+ +
Sbjct: 1144 LLLEQ-MLSNNCVPDIVTFNTIIDAMCKTYRVDIA-------------YELFNLIQESGC 1189
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN L+ C + + + L+ EM R G SP+ I++ +ID S V+ A
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M DG++PD V Y+ I + + + +A ++ E M P +TY TL+
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 1309
Query: 629 SRYGSLHEVQQCL 641
+ G+L + + L
Sbjct: 1310 CKTGNLDKALEIL 1322
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 181/429 (42%), Gaps = 44/429 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A R D + PN+ T++D G C GD + + + + N +N++
Sbjct: 319 ACRVMDKMIQRGCQPNVITYGTLVD--GFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
M+V +D++ +V + M + G D +Y+ ++ C AG +E + ++ +
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL---REAHDLLEQMIR 433
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G + DV ST++ A A ++ + P+ + +S LI+A A +
Sbjct: 434 RGC-RPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLP 492
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVA 467
+A + M++ C P+ N ++ ++ + + AF LF ++ + V
Sbjct: 493 EAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVI 552
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D N D M + K++ P TY+ L+ C
Sbjct: 553 HSFCKDNNLDSAFKMLERMKEA--------------------KCVPDVVTYSALINGLCK 592
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
KA + EM G +PN +++ LID VE A ++L+IMR+ +PD +
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL---- 641
YT I + RL++A+ + EMK P+ +TY TLLRA + +L V+Q L
Sbjct: 653 YTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Query: 642 AVYQDMWKA 650
A + W A
Sbjct: 713 ATEEGQWNA 721
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 58/335 (17%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L+VY+N KL +M ++ IL+ C AG+ A E+ +K + GV + +V
Sbjct: 861 KDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAYEL---LKEMPRHGVPQ-NVIL 914
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ ++K A+ AL++ ++M +G P+ T+S+++++ +G V+ A L E+M
Sbjct: 915 HNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM 974
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC PN + LL +A + D A L + T S
Sbjct: 975 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC-------------------- 1014
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRT 541
+PN V TYN ++ C R+ L+ EM
Sbjct: 1015 --------SPNIV-------------------TYNTIIDGHCK-LGRIDEAYHLLEEMVD 1046
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN +++T+L+DA G E A+ ++++M E G P++ Y + + + + +++
Sbjct: 1047 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 1106
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A L M PN+V+Y T++ + +HE
Sbjct: 1107 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 31/360 (8%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+ N L+NV AH +++++ + D +Y+ L+ AG + A E++
Sbjct: 126 IFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFD 185
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA-LKVKEDMLSAGVTPNTITWSSLINA 407
E+ KG LK + +I++ DA A L +E +S P+++T++++IN
Sbjct: 186 EMNR---KG-LKAHAGVHKSILRGLCDAGQCSDAVLHFRE--MSKTCPPDSVTYNTMING 239
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ + ++ A+ L EEM+ G PN N +L F +A R+ + L + V
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG------FCKANRVENALWLLEQMVT 293
Query: 468 LG--EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
G D T I+ + D+ + DK +P TY L+
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQV----------DEACRVMDKMIQRGCQPNVITYGTLVD 343
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D L+ +M G PN I++ ++ ++E A Q+L++M + G P
Sbjct: 344 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D + Y+T I ++ +L++A L E+M +P++ TL+ A + ++ Q+ L
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 127/626 (20%), Positives = 252/626 (40%), Gaps = 121/626 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEG---NVSKFASMLSLEMVASGIVKSIREGRID 130
Y+ + L K G++++ +VE +VS+G NV ++S+L G+ K+ G++D
Sbjct: 951 YSTIVDSLVKSGKVDDACRLVED-MVSKGCSPNVVTYSSLL------HGLCKA---GKLD 1000
Query: 131 CVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGEVEMFVGL 177
+L+++ G +P + DG + LL + ++D G V
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL----EEMVDGGCQPNVVTY 1056
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+L+ F + ++ +V++ V K V Y ++ +FC KK ++
Sbjct: 1057 TVLLDAF-CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD----MFC-------KKDEV 1104
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFN 295
A + + + PN+ T+I G+C + E + S N +I FN
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSYNTVI--AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++++ + + E++ +Q+ G ++ +YN L+ C + A+ + ++ +
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL---LREM 1219
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
K D+ TY+T++ +K A K+ MLS G+ P+ +T+S +I++
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++A ++ E ML+ G +P + L+ + D+A + + LSK +
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVTFS 1338
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
D +S + +Q+ + R P T TYN L+K C
Sbjct: 1339 IFIDWLSK-RGRLRQAGELLETML----------RAGLVPDTVTYNTLLKGFCDASLTED 1387
Query: 534 A--LMNEMRTVGLSPNHISWTIL------------------------------------- 554
A L MR G P++ ++T L
Sbjct: 1388 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLE 1447
Query: 555 ---------------IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+D G G+ + A ++ + M + +VV ++ + V V K+
Sbjct: 1448 ASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQE 1503
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
+QAF L+ M ++P+ VT+++LL
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLL 1529
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 146/621 (23%), Positives = 248/621 (39%), Gaps = 74/621 (11%)
Query: 57 TALLSTVRRDLSSRNDY-YADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSL 113
TALL + R S N Y + K GR++E ++E +V + NV + +L
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD- 1061
Query: 114 EMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL--KNECQR------- 164
+ G+ + +G+++ + E G P S + K+E +R
Sbjct: 1062 --------AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK--PDV---NLAIRYACIVPR 219
++ G V V V+ K + + Q+ N PD+ N I C R
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 220 ADILF--CNFVREFGKKRDLVS---------ALRAYDA--------SKKHLSSPNMYICR 260
DI + N ++E G +LV+ R +D ++K SP++
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 261 TIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
T+ID G+C RA + + L +VT +I V +SL D V +
Sbjct: 1234 TVID--GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI-VISSLCKWRFMDEANN--VLE 1288
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M K G +Y L+ C GN A EI ++ L +KG DV T+S +
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI---LQLLLSKGSYP-DVVTFSIFIDWL 1344
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A ++ E ML AG+ P+T+T+++L+ +A L E A+ LFE M Q GCEP++
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
L+ V+ + + S ++ T L + + +E +
Sbjct: 1405 ATYTTLVGHLVDKKSY-KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIV 1463
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPN 547
F S D R F+ +L A Y K L M G+ P+
Sbjct: 1464 DMF--GKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPD 1521
Query: 548 HISWTILIDACGGSGNVEGAL-QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ L+ C +G ++ A+ + + I R+ G+ P V ++ I + R + +A L
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
M +P+ T+ LL A
Sbjct: 1582 LGMP---CKPSAATWNCLLSA 1599
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 46/271 (16%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +T + +++ K + AL+V + L +PN T++ LI+ AG + A L
Sbjct: 843 DTYTCNCLLQALLRLKRPKDALQVYRNKLCC--SPNMFTFTILIHGLCRAGDIGTAYELL 900
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM + G N N++++ A + D A LF+
Sbjct: 901 KEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM---------------------- 938
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
++S + P+ F +T +++ D R L+ +M +
Sbjct: 939 -----EESGSCPPDV--------------FTYSTIVDSLVKSGKVDDACR---LVEDMVS 976
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G SPN ++++ L+ +G ++ A +L+ M G SP++V Y T I + R+ +
Sbjct: 977 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A+ L EEM QPN+VTY LL A + G
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 15/290 (5%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E + + ++F + ++ V A + A + + +T+T+S+LI+ AG
Sbjct: 117 ETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGK 176
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+ A LF+EM + G + ++ +L+ +A Q A FR +SKT Y+
Sbjct: 177 ILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE--MSKTCPPDSVTYN 234
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ +S + D +I V N F P +YN ++ C
Sbjct: 235 TMINGLSKSDRLD-DAIRLLEEMVDN----------GFAPNVFSYNTVLHGFCKANRVEN 283
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+ +M T G P+ +S+T +I+ V+ A +++ M + G P+V+ Y T +
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 343
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
R L A L +M +PN +TY ++ R + Q L
Sbjct: 344 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI------YE 280
+ K + L A D K+ P++ +++D G+C KSR I ++
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD--GLC----KSRRINDAFLLFD 534
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+R+ V ++ ++ +++ D L ++ + M++ + D+ +Y+ L+ C AG
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ E+ ++ TY+T++ + A ++ E M TP++
Sbjct: 595 TVDKAFDVFQEMLGCGCAP----NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
IT++ LIN NA +E+A + EM GC P+ LL+A
Sbjct: 651 ITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVG-LSPNHISWTILIDACGGSGNV 564
R +N+++K C+ AL EM G P+ +++ ++D+ SG V
Sbjct: 905 RHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 964
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A ++++ M G SP+VV Y++ + ++ +L +A +L + M PN+VTY T+
Sbjct: 965 DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024
Query: 625 LRARSRYGSLHEVQQCL 641
+ + G + E L
Sbjct: 1025 IDGHCKLGRIDEAYHLL 1041
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVT-----LNIYVFNSLMNVNAHDLKFTLEVYKNMQ 316
I+D+ G CG +R ++E + +NV L +YVF+ + F L ++ M
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFH-----KQEEQAFGL--WRVMG 1514
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
GV D ++ LL CC AG L E + L+ V +S ++ +
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAG---LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR- 1570
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ + ++ ML P+ TW+ L++A G E+A+ + E
Sbjct: 1571 --LGLVNEAEDLMLGMPCKPSAATWNCLLSAYKICGDFERALRVAE 1614
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 165/337 (48%), Gaps = 24/337 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M +G D+ +YN L+ C G V A+E+ E ++ KG + +V TY+ ++
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE---MQIKGC-EPNVITYTILI 56
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + A V ++M G+ N + ++ LI+A V+ A+++F +M GC+
Sbjct: 57 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 116
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQ 488
P+ N L+ + +F+ A L++ L E NT + + H +
Sbjct: 117 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLL--------EGVIANTITYNTLIHAFLRRG 168
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKP-TTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
++ V D F P TYN L+KA C + + AL +M + GL+
Sbjct: 169 AMQEALKLVN-------DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 221
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+IS ILI+ +GN++ AL+ L+ M G++PD+V Y + I ++ R ++A +L
Sbjct: 222 PNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 281
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F++++ I P+ +TY TL+ + G + L+
Sbjct: 282 FDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 24/329 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK LVSA + + PN+ +ID G ++R + +++ + + LN
Sbjct: 26 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 85
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L++ D K L ++ +M G D+ ++N L+ C +E G
Sbjct: 86 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF---EEALGLY 142
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV+ + TY+T++ F Q ALK+ DML G + IT++ LI A
Sbjct: 143 QDMLLEGVIA-NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 201
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG +E+ + LFE+M+ G PN+ CNIL+ A R L
Sbjct: 202 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM----IHRGLTP 257
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR--FSFKPTTTTYNILMKACCTD 528
D I+ + + + FDK P TYN L+ C +
Sbjct: 258 DIVTYNSLINGLCKTGRAQ----------EALNLFDKLQVEGICPDAITYNTLISWHCKE 307
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILI 555
+ L++ G PN ++W IL+
Sbjct: 308 GMFDDAHLLLSRGVDSGFIPNEVTWYILV 336
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C Y V A LMNEM+ G PN I++TILID G +E A +
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G++ + V Y I + ++++ A ++F +M +P++ T+ +L+ +
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
+++ ++ L +YQDM G
Sbjct: 132 ---VNKFEEALGLYQDMLLEG 149
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 17/269 (6%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E MLS G P+ T+++LI G + A L EM GCEPN IL+
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ + + A + +S +AL + G IS + +K + + N +
Sbjct: 61 KEGRLEEARNVLDE--MSGKGLAL--NAVGYNCLISALCKDEK--VQDALNMFGDMSSKG 114
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP T+N L+ C + L +M G+ N I++ LI A G
Sbjct: 115 C------KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 168
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ AL+++ M G D + Y IK R+ +++ +LFE+M + PN ++
Sbjct: 169 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 228
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ R G+ +Q L +DM G
Sbjct: 229 ILINGLCRTGN---IQHALEFLRDMIHRG 254
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 61/422 (14%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D GD K RAI
Sbjct: 497 VVYTSLIRNFFMHGRKED---GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED++ ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A E+ E+K V TY +I+ A A + E+ S G+
Sbjct: 614 SGKLDKAYEVLEEMKVKRVPPT----VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL 669
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N I +SSLI+ G +++A + EEM++ G PN N L+ A V+A + + A F
Sbjct: 670 NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICF 729
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P T
Sbjct: 730 QSM-----------------------------------------------KEMKCSPNTY 742
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+IL+ C Y + EM+ GL PN +++T +I GN+ A + +
Sbjct: 743 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G +PD ++ I+ + R +A+ +FEE + + N+ I+LL A ++ L
Sbjct: 803 KANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECL 862
Query: 635 HE 636
+
Sbjct: 863 EQ 864
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 134/644 (20%), Positives = 269/644 (41%), Gaps = 72/644 (11%)
Query: 38 FPLASSSSLSSIPTVHSSQTALLSTVRRDLSSR---------------NDYYADMASKLA 82
F LASS++ S P + A+L + DL++ N AD+ S L
Sbjct: 100 FFLASSAA-SPHPLPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALV 158
Query: 83 KDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNEL 142
+ RL++ E V+ + + KF S V G + R+ + + +L+++ E+
Sbjct: 159 RTRRLDD----AERVIAAMRRL-KFRPAFSAYTVLIGAMAEARQP--ERALELLRQMQEV 211
Query: 143 GVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV 202
G G L + L G VE G + +++E + L+ + + +C+
Sbjct: 212 GYE-------VGVPLFTTLVRALAREGRVE---GALALVDEVKGSC--LEPDIVLYNVCI 259
Query: 203 N----KPDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
+ +V++A ++ + + D+ + + + K L A + + +
Sbjct: 260 DCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P Y T+I G G + + + + L+ + ++ FNS++ K L +
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K + ++YNI++ C+AG A I E++H L ++ T + +V
Sbjct: 380 FEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEH----AGLFPNLLTVNIMVD 434
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK ++ A ++ E G PN++T+ SLI+ G V+ A LFE ML G
Sbjct: 435 RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNA 494
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQS 489
N L++ + + ++F+ Q + L Y + ++E K +
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVE-KGRAI 553
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
+ K + F P +Y+IL+ ++ + M+ G + +
Sbjct: 554 FEDI-------------KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALD 600
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ ++D SG ++ A ++L+ M+ + P V Y + I + RL +A+ LFE
Sbjct: 601 ARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFE 660
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
E K I+ N++ Y +L+ +G + + + + ++M K G
Sbjct: 661 EAKSKGIELNVIVYSSLIDG---FGKVGRIDEAYLILEEMMKKG 701
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 182/450 (40%), Gaps = 66/450 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG---------DYMKSRAIYED 281
GKKR + AL ++A KK + PN IID+ + G D M+ ++ +
Sbjct: 367 LGKKRKVDEALTLFEAMKKD-AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Query: 282 LRSQNVTLN-------------IYVFNSLMNVNAHDLKF---------------TLEVYK 313
L + N+ ++ ++ S N + + + +++
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE 485
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
NM G A+ Y L++ + G +I+ E+ + L L + TY V
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTL-LNTYMDCVFKA 544
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
D + + ED+ G P+ ++S LI+ AG + +F M Q G ++
Sbjct: 545 GDV---EKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDA 601
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+ N ++ ++ + D+A+ + + + + Y D ++ ++ D+
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA-TYGSIIDGLAKIDRLDEA----- 655
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSP 546
Y F++ K N+++ + D + ++ EM GL+P
Sbjct: 656 --------YMLFEEA---KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 704
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +W L+DA + + AL + M+E SP+ Y+ I R ++ +AF +
Sbjct: 705 NVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 764
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+EM+ + PN+VTY T++ ++ G++ +
Sbjct: 765 QEMQKQGLVPNVVTYTTMIAGLAKVGNITD 794
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 15/255 (5%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + + + K L A ++ +K N+ + ++ID G G ++
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I E++ + +T N+Y +NSLM+ V A ++ L +++M+++ + +Y+IL+
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ K L +V TY+T++ A A + E + G
Sbjct: 752 CRVQKYNKAFVFWQEMQ----KQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGG 807
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEACQF 449
TP+ ++++LI ++A +A H+FEE GC N + C LL A C+E
Sbjct: 808 TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAV 867
Query: 450 ----DRAFRLFRSWT 460
+ R F WT
Sbjct: 868 VGFGENTVRHFFQWT 882
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 488 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + + +R + KP TYN
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTL-------------------FEMMIQR-NLKPDVVTYNT 643
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 798
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 65/377 (17%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 298 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 357
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 358 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 413
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 470
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 471 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 499
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 500 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 544
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 620 TYITLLRARSRYGSLHE 636
T+ TL+ + G++++
Sbjct: 605 TFTTLINGYXKDGNMNK 621
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 174/430 (40%), Gaps = 58/430 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 407
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 408 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K P Y
Sbjct: 525 -----------------------------------------------KNAGLAPDNVIYT 537
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ C + +AL +EM G + +++ +++ + A ++ M E
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD +TT I + + +A +LFE M ++P++VTY TL+ + + +V
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 638 QQCLAVYQDM 647
+ ++ DM
Sbjct: 658 NE---LWNDM 664
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 162/387 (41%), Gaps = 59/387 (15%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
L AL+ + K +P+ I +I G C + + S A + +++ Q L++ +
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMSEALKVRDEMLEQGCXLDVVTY 571
Query: 295 NSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+++N + L E++ M + GV D ++ L+ GN A ++
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF----E 627
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ + LK DV TY+T++ F + ++ DM+S + PN I++ LIN N G
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 687
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A L++EM++ G E CN +++ A +A
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA-------------------- 727
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
+ +SNM K P TYN L+ +
Sbjct: 728 ---DEFLSNMLLK------------------------GIVPDGITYNTLINGFIKEENMD 760
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R AL+N+M GL P+ I++ ++++ G ++ A I+ M E G++PD YT+ I
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPN 617
V LK+AF + +EM P+
Sbjct: 821 NGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 157/370 (42%), Gaps = 58/370 (15%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N N VF+ L+ V A L+ E ++ ++ G+ + + N LL G LA
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
EIY EV + ++++V+T + ++ + + DM GV P+ +T+++
Sbjct: 343 WEIYQEV----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LINA GL+E+A L + M G +P N ++ + ++ RA
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA----------- 447
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G D + + P T TYNIL+
Sbjct: 448 ---------KGVLDEM---------------------------LKIGMSPDTATYNILLV 471
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CC + + A + +EM + G+ P+ +S++ LI +G ++ AL+ + M+ G++P
Sbjct: 472 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V YT I R+ + +A + +EM ++VTY T+L + L E +
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE-- 589
Query: 642 AVYQDMWKAG 651
++ +M + G
Sbjct: 590 -LFTEMTERG 598
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 606 FTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 663
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 782
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 783 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 843 GFVPDDK 849
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/553 (21%), Positives = 232/553 (41%), Gaps = 54/553 (9%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKL----LKNECQRLLDSGEVEMFVGLME 179
I R+D + KL G+ P + GF L K E + LD + M G
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGV-SAHGFVLDALFCKGEVTKALDFHRLVMERG--- 247
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVN---LAIRYACIVPRADILFCNFVREFGKKRD 236
FR+ + ++ + L V++ +V L++ C + FC + F K+ +
Sbjct: 248 ----FRVGIVSCNKVLK--GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
+ A + ++ P++ T+ID G ++ + V L++ VF+S
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ V + DL VYK M G+ ++ +Y IL+K C G A +YG++
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI---- 417
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K ++ + TYS+++ F + + EDM+ G P+ + + L++ + GL+
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL-----------SK 463
AM +ML N N L+ +FD A ++FR + +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 464 TQVALGEDYDGNTDR------ISNMEHKDKQS----ITNTP-NFVPNSHYSSFDKRF--- 509
+V++ ED + + ++ ++K S + N + + H +F
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 510 ----SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+P TYN ++ C+ + + ++ PN ++ TILI + +
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++GA+++ IM E G P+ V Y + +S ++ +F LFEEM+ I P++V+Y
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 624 LLRARSRYGSLHE 636
++ + G + E
Sbjct: 718 IIDGLCKRGRVDE 730
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 199/447 (44%), Gaps = 43/447 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F + + + K DL +A Y SPN+ + TI+ + G+C G ++ +Y
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYTIL-IKGLCQDGRIYEAFGMY 414
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + +I ++SL++ +L+ +Y++M K+G D+ Y +L+ L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LS 472
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ + VK L ++L+V +++++ + + ALKV M G+ P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 398 TITWSSLINACANAGLVEQA----------MHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
T+++++ ++E A + LF+ M + + CN+++ +
Sbjct: 531 VATFTTVMRV----SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFD 506
+ + A + F + K + + Y+ ++ D+ + I P
Sbjct: 587 RIEDASKFFNNLIEGKMEPDI-VTYNTMICGYCSLRRLDEAERIFELLKVTP-------- 637
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
F P T T IL+ C D + + M G PN +++ L+D S ++
Sbjct: 638 ----FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
EG+ ++ + M+E G+SP +V+Y+ I + R+ +A ++F + ++ P++V Y L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R + G L E +Y+ M + G
Sbjct: 754 IRGYCKVGRLVEAA---LLYEHMLRNG 777
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 168/420 (40%), Gaps = 65/420 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + F K +L S Y+ K P++ I ++D G + +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK------A 333
+ Q++ LN+ VFNSL++ +F L+V++ M G+ D+A++ +++ A
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C + +++ L + + D+ + ++ + + A K +++
Sbjct: 547 FCKHMKPTIGLQLF----DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ +T++++I + +++A +FE + PN+ IL+ + D A
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+F S M K KP
Sbjct: 663 RMF-----------------------SIMAEKGS------------------------KP 675
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY LM + D L EM+ G+SP+ +S++I+ID G V+ A I
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVVAY I+ + RL +A L+E M ++P+ + L RA S Y
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL----LQRALSEY 791
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 17/274 (6%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++ +L G PN +T+ +LIN G +++A LF+ M Q G EP+ + L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ +A +LF S L K G D S ++ K T + V
Sbjct: 328 IDGYFKAGMLGMGHKLF-SQALHK-----GVKLDVVVFS-STIDVYVKSGDLATASVVYK 380
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
P TY IL+K C D Y + ++ G+ P+ ++++ LID
Sbjct: 381 RMLCQ-----GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN+ + + M + G PDVV Y + + + A +M I+ N
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+V + +L+ R L+ + L V++ M G
Sbjct: 496 VVVFNSLIDGWCR---LNRFDEALKVFRLMGIYG 526
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 171/388 (44%), Gaps = 24/388 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +ID GD + A+ + + ++ + I +NS++ +F EV
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + V D+ S+NIL+ C G A + Y E++H + DV ++S ++
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR----YVTPDVVSFSCLIG 305
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F+ A +M G+ P+ + ++ +I AG + +A+ + +EM+ GC P
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL + RL + L G D T + + H
Sbjct: 366 DVVTYNTLLNGLC------KQHRLLDAEKLLNEMEERGVTPDLCT--FTTLIH----GYC 413
Query: 492 NTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
NF + FD R +P TYN L+ C D + L ++M + PN
Sbjct: 414 RQGNF--ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN 471
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
HI+++ILID+ G VE A L M + G P++ Y + IK RS +K+ +
Sbjct: 472 HITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQ 531
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLH 635
+M+ + P+L+T+ TL+ + ++H
Sbjct: 532 KMRQDNVFPDLITFNTLIHGYIKEENMH 559
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 160/380 (42%), Gaps = 29/380 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + S + +N Y N +++ L+F V M+K V D+ ++N+L+ A
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG+ A + V + +G LK + TY++++K + + A +V M V P
Sbjct: 205 AGDVDAAIAL---VDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAP 260
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +++ LI G V++A+ ++EM P+ + L+ + D A
Sbjct: 261 DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYL 320
Query: 457 RSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R V G Y G R +M +++ V F P
Sbjct: 321 REMK-GLGLVPDGVIYTMVIGGFCRAGSMS----EALRVRDEMVG----------FGCLP 365
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + A L+NEM G++P+ ++T LI GN E ALQ+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVV Y + I R L +A L+++M +I PN +TY L+ +
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G +V+ +M K G
Sbjct: 486 G---QVEDAFGFLDEMVKKG 502
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 183/437 (41%), Gaps = 50/437 (11%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E FR + C PDV +IL F R G+ ++ A++ Y +
Sbjct: 248 EVFRTMDQCSVAPDVR----------SFNILIGGFCR-VGEVKE---AVKFYKEMQHRYV 293
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I + G+ + A +++ + + ++ ++ A + L
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M G + D+ +YN LL C + A+++ E +E +GV D+ T++T++
Sbjct: 354 VRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE---MEERGVTP-DLCTFTTLI 409
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL++ + +L + P+ +T++SLI+ G + +A L+++M
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL 469
Query: 431 PNSQCCNILLQACVEACQFDRAF----RLFRSWTLSKTQ----VALGEDYDGNTDRISNM 482
PN +IL+ + E Q + AF + + L + + G GN +
Sbjct: 470 PNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQF 529
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K +Q D F P T+N L+ + A + N M
Sbjct: 530 LQKMRQ-----------------DNVF---PDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ P+ +++ ++I+ GN++ A ++ K M + G+ PD Y + I V + K
Sbjct: 570 KEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSK 629
Query: 601 QAFSLFEEMKHYQIQPN 617
QAF L +EM H P+
Sbjct: 630 QAFQLHDEMIHRGFAPD 646
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 38/377 (10%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
R I L + + T VF+ L+ K E ++ + V ++ N LL
Sbjct: 72 REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG LAQE Y V +++ ++ +T + +V + + A V +M
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSE----VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ +T + LI+A AG V+ A+ L + M G +P N +L+ + +FD+A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247
Query: 454 RLFRSWTLSKTQVALGEDYD------GNTDRISNME-----HKDKQSITNTPNFVPNSHY 502
+FR+ Q ++ D G R+ ++ +K+ Q TP+ V +
Sbjct: 248 EVFRTM----DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVV---SF 300
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
S FS + + A + EM+ +GL P+ + +T++I +G
Sbjct: 301 SCLIGLFSRR--------------GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ AL++ M G PDVV Y T + + RL A L EM+ + P+L T+
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406
Query: 623 TLLRARSRYGSLHEVQQ 639
TL+ R G+ Q
Sbjct: 407 TLIHGYCRQGNFENALQ 423
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 41/248 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + + ++ + +AL+ +D + P++ ++ID G+C GD K+ +++D
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID--GMCRKGDLAKANELWDD 462
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ ++ + N ++ L +++H K +E M K G + ++ +YN ++K C +
Sbjct: 463 MHAREILPNHITYSIL--IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 338 GNTVLAQE--------------------IYGEVKHLEAKG-----------VLKLDVFTY 366
GN Q+ I+G +K G +++ D TY
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ I+ F++ Q A +V + M +G+ P+ T+ SLIN AG +QA L +EM+
Sbjct: 581 NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640
Query: 427 AGCEPNSQ 434
G P+ +
Sbjct: 641 RGFAPDDK 648
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 61/339 (17%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKN 314
Y T+I CG ++ + ++RS+ + N++ +++LMNV A++L +VYK
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---KGVLKLDVFTYSTIVK 371
M + G ++ +YNIL+ + ++ E + L + ++ +V TY+T++
Sbjct: 61 MLEEGCSPNLVTYNILI-------DVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVIS 113
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ALKV E ML+AGV P+ T+++LI+A G VE+A+ +F +M++ GCE
Sbjct: 114 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCER 173
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N + L+ AC +A +++ A LF S M HK+
Sbjct: 174 NVITYSSLISACEKAGRWEMALELF-----------------------SKM-HKE----- 204
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+ KP TYN L+ AC + KA L +M+T G P+ I
Sbjct: 205 ------------------NCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSI 246
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
++ LI A G AL+ + M+ G PD + +
Sbjct: 247 TYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNS 285
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 21/292 (7%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+T++ + + AL++ +M S G+ N T+S+L+N C A ++ A ++++
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
ML+ GC PN NIL+ VEA + R + L ++ + E NT + +
Sbjct: 61 MLEEGCSPNLVTYNILID--VEASKRKTTERRRLAVALVRSGIQ-AEVRTYNT--VISAC 115
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+K Q P ++K + KP+ TTY L+ A KAL +M
Sbjct: 116 NKSGQ---------PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G N I+++ LI AC +G E AL++ M ++ P+VV Y + I C
Sbjct: 167 IRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHW 226
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A LFE+M+ +P+ +TY L+ A R G + ++ L ++ M G
Sbjct: 227 EKASELFEQMQTQGCKPDSITYCGLITAYERGG---QWRRALKAFEQMQSQG 275
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 147/338 (43%), Gaps = 55/338 (16%)
Query: 292 YVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y + ++++ +H L+ LE+ M+ G+ ++ +Y+ L+ C A LAQ++Y
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY-- 58
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
K + +G ++ TY+ ++ V A + ++ ++ +G+ T++++I+AC
Sbjct: 59 -KQMLEEGC-SPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACN 116
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+G EQA+ ++E+ML AG +P++ L+ A + Q ++A +FR
Sbjct: 117 KSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFR------------ 164
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CT 527
D I R + TY+ L+ AC
Sbjct: 165 -------DMI----------------------------RRGCERNVITYSSLISACEKAG 189
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ L ++M PN +++ LI AC G+ E A ++ + M+ G PD + Y
Sbjct: 190 RWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYC 249
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I R + ++A FE+M+ P+ + +L+
Sbjct: 250 GLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKL 318
T+I C G ++ +YE + + V + + +L++ ++ L+++++M +
Sbjct: 110 TVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRR 169
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G ++ +Y+ L+ AC AG +A E++ ++ K K +V TY++++ +
Sbjct: 170 GCERNVITYSSLISACEKAGRWEMALELFSKMH----KENCKPNVVTYNSLIAACSHGGH 225
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ A ++ E M + G P++IT+ LI A G +A+ FE+M GC P++ N
Sbjct: 226 WEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNS 285
Query: 439 LL 440
L+
Sbjct: 286 LM 287
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 180/401 (44%), Gaps = 29/401 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 566
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 671
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 792 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMG 829
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 715
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 716 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 189/461 (40%), Gaps = 65/461 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYD------GNTDRISNMEHKDKQSITNTPN---FVP--NSHYS 503
K V L + GN DR K+ Q + + P F+P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
S D R S + PT T+N L+ KA +++EM G+S N +
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I N Y L+ +R G + E + Q M K G
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 759
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 675 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 783
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 784 ----------------TQTIEEME------------------------ALGVKPNIKTYT 803
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 863
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 864 KEMVEAGLIVDM 875
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 23/366 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N++M+ + ++ L ++ M++LG + S+N ++ C A +++
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E +EAK + D ++Y ++ A A A K+ + ML +G+TP+ +T++ +I+
Sbjct: 174 HE---MEAKDIPP-DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +++A+ LF+ M GC P+ NIL+ A + + D AFRL + T
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT------- 282
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
DG+ + + + H + KPT T N L+ C
Sbjct: 283 ----DDGHVPDVVTYSTL-ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +++ M + G SP+ +++ L+ +G E A ++L M G++P+VV
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT + ++ RL +A +F +MK PNL TY L+ + S +V L ++
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG---FCSAGQVDGGLKLFG 454
Query: 646 DMWKAG 651
+M AG
Sbjct: 455 EMVCAG 460
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 24/366 (6%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +NV+ + + + L++ A L +++ + GV +Y L+ C+A +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ ++ +G V TY+ ++ + A + + M+ G P+ +
Sbjct: 61 FDDARELFADMNR---RGCPPSPV-TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++++++ + VE+A+ LF EM + GC PN + N ++ + + D+A ++F
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTT 517
E D D S D + N Y F + P+ T
Sbjct: 177 ----------EAKDIPPDSWSYGILIDGLAKAGK----LNEAYKLFQRMLDSGITPSAVT 222
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+++ C Y +A L MR+ G P+ ++ ILIDA G ++ A ++LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+DG PDVV Y+T I R+ A L E+M Q +P +VT TL+ + G +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 636 EVQQCL 641
E ++ L
Sbjct: 343 EAREVL 348
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 180/427 (42%), Gaps = 36/427 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ + +ID G +R +++ L VT + + SL++ A+ E
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M + G +YN+++ A C G + +E +K + G + DV TY+T++
Sbjct: 67 LFADMNRRGCPPSPVTYNVMIDASCKRG---MLEEACDLIKKMIEDGHVP-DVVTYNTVM 122
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + AL + +M G TPN + +++I ++QA +F EM
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDR 478
P+S IL+ +A + + A++LF+ ++ + + L D +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 479 ISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCT 527
+M K + T N + ++H D+ F P TY+ L+ C+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 528 DYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
RV + L+ +M P ++ LI +G ++ A ++L M G SPDVV
Sbjct: 303 -IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R+ + ++A L +M + PN+VTY L+ + L E V+
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA---CGVF 418
Query: 645 QDMWKAG 651
M +G
Sbjct: 419 AQMKSSG 425
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 162/387 (41%), Gaps = 42/387 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ ++ +PN TII G+C +A ++ ++ ++++ + + + L
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTII--LGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ A K E YK Q++ G+ +YN+++ CLA A E++ K +
Sbjct: 192 IDGLAKAGKLN-EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF---KSMR 247
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+KG + FT++ ++ A ++ + M G P+ +T+S+LI+ + V
Sbjct: 248 SKGC-RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQV 466
+ A HL E+M++ C+P N L+ +A + A + + S +
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G G T+R + S R P TY L+ C
Sbjct: 367 VHGHCRAGQTERAREL-------------------LSDMVAR-GLAPNVVTYTALVSGLC 406
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A + +M++ G +PN ++T LI +G V+G L++ M G+SPD V
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKH 611
Y T +S R +A + E +
Sbjct: 467 VYGTLAAELCKSGRSARALEILREGRE 493
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + ED+ + + N+L++ A +K EV M G D+ +YN L+
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C AG T A+E+ + + A+G L +V TY+ +V A A V M S+
Sbjct: 369 GHCRAGQTERARELLSD---MVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN T+++LI +AG V+ + LF EM+ AG P+ L ++ + RA
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 453 FRLFRSWTLSKTQVALGED 471
+ R S A G++
Sbjct: 485 LEILREGRESLRSEAWGDE 503
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 31/302 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ A A W+ A+ + +DML A + P+ T+++++NAC AG ++A+
Sbjct: 185 KPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALE 244
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M++ G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 245 LCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYF--------EMMKGANIAPDTFTL 296
Query: 480 SNM--------EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDY 529
+ + +H D + N S +KR P TY ++ + C
Sbjct: 297 NIVIHCLVKVGQHGDAVDLLN----------SMREKRVQCSPDVVTYTSIIHSYYVCGQV 346
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA+ + M G+ PN +S+ L+ A G A I K+++++G+ PDVV+YTT
Sbjct: 347 ENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTL 406
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ RS + ++A +F EM+ +PN V+Y L+ A YGS ++ +++ +M K
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDA---YGSAGMFKEAISLLHEMEK 463
Query: 650 AG 651
G
Sbjct: 464 DG 465
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 173/402 (43%), Gaps = 29/402 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ I ++I+ G + + I +D+ + + +N+++N A + K LE+
Sbjct: 186 PDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALEL 245
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M + GV D+ ++NI+L A N + G + ++ + D FT + ++
Sbjct: 246 CKKMIRNGVGPDLVTHNIVLSAF---KNGFQYTKATGYFEMMKGANIAP-DTFTLNIVIH 301
Query: 372 VFADAKWWQMALKVKEDMLSAGV--TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
A+ + M V +P+ +T++S+I++ G VE +F+ M+ G
Sbjct: 302 CLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGV 361
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N LL A AF +F+ L K Q L D T + N + Q
Sbjct: 362 KPNIVSYNALLGAYASHGMHTEAFGIFK---LLK-QNGLRPDVVSYTTLL-NAYGRSAQ- 415
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
P F+ ++ S KP +YN L+ A + + +L++EM G+
Sbjct: 416 --------PEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIP 467
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +S + L+ ACG +L+ + G+ ++VAY + I + ++A L
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ M + P+ VTY L+ + G E L ++DM
Sbjct: 528 YATMMASNVNPDAVTYNILISGLCKLGKYAE---SLKFFEDM 566
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 18/338 (5%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M GV ++ SYN LL A G + E +G K L+ G L+ DV +Y+T++
Sbjct: 352 VFDMMVAEGVKPNIVSYNALLGAYASHG---MHTEAFGIFKLLKQNG-LRPDVVSYTTLL 407
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + A +V +M PN +++++LI+A +AG+ ++A+ L EM + G
Sbjct: 408 NAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIP 467
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + LL AC Q + + + ++ + G +S +++ +
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
Y++ + P TYNIL+ C Y +M + +
Sbjct: 528 -----------YATMMAS-NVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTK 575
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ LI + + A M+ G PDV+ YT I+ + LF+E
Sbjct: 576 EVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ I P+ + +L+ A ++ V Q + D
Sbjct: 636 MEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHD 673
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 173/436 (39%), Gaps = 40/436 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + N V G + AL ++ P++ ++ Y K+
Sbjct: 219 IPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKAT 278
Query: 277 AIYEDLRSQNV-----TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+E ++ N+ TLNI V + L+ V H L +++ D+ +Y ++
Sbjct: 279 GYFEMMKGANIAPDTFTLNI-VIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSII 337
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ + G + ++ + A+GV K ++ +Y+ ++ +A A + + +
Sbjct: 338 HSYYVCGQVENCKAVF---DMMVAEGV-KPNIVSYNALLGAYASHGMHTEAFGIFKLLKQ 393
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +++++L+NA + E+A +F EM + C+PN N L+ A A F
Sbjct: 394 NGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKE 453
Query: 452 AFRLFRSW----------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A L ++S A G T +I + K NS
Sbjct: 454 AISLLHEMEKDGIPPDVVSISTLLAACGRCR--QTTKIDTVLEAAKFRGIELNIVAYNSG 511
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S+ SF DY + L M ++P+ +++ ILI
Sbjct: 512 IGSY---LSF---------------GDYEKALKLYATMMASNVNPDAVTYNILISGLCKL 553
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +L+ + M + + Y++ I V+ +L +A S F MK P+++TY
Sbjct: 554 GKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTY 613
Query: 622 ITLLRARSRYGSLHEV 637
+++A + +GS V
Sbjct: 614 TAMIQAYTDHGSWTSV 629
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 48/261 (18%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K + E + + + LNI +NS + ++ D + L++
Sbjct: 468 PDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKL 527
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV---------------LAQEIYGEVK----- 351
Y M V D +YNIL+ C G L +E+Y +
Sbjct: 528 YATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVK 587
Query: 352 ------------HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+++A G DV TY+ +++ + D W + ++M + P+ I
Sbjct: 588 QDKLAEAESTFINMKASGCFP-DVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAI 646
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
SSL+ A + + L + M + QC + +A E + + R W
Sbjct: 647 ICSSLMEALNKGNQYGRVLQLMKFM-------HDQCIQLNQKAYFEIIA---SCSMLRDW 696
Query: 460 TLSKTQVALGEDYDGNTDRIS 480
KT + E D + IS
Sbjct: 697 ---KTASEIIEHLDSSLPSIS 714
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 205/484 (42%), Gaps = 80/484 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 279 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 338
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 339 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 398
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 399 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 458
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 459 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 571
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 572 --------------------------------------------KEMNLEPTDGTYNTLL 587
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 588 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 647
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 648 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 706
Query: 641 LAVY 644
+ Y
Sbjct: 707 IKDY 710
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 171/414 (41%), Gaps = 53/414 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 240 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 276
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 277 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 327 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 382
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 383 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 436
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 437 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 489
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 603
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 175/428 (40%), Gaps = 24/428 (5%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + +D ++ + N+ I G+ G + ++
Sbjct: 128 CNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK 187
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + LEVY+ M GV+ + +Y++L+ A G
Sbjct: 188 EAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA---FGKRR 244
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+ + ++ +EA GV K +V++Y+ ++V AK + A ++ M + G P+ IT
Sbjct: 245 DVETVLWLLREMEAHGV-KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 303
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M ++ +P+ LL + + W
Sbjct: 304 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI---WNA 360
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K DG D + F + ++ P +YN L
Sbjct: 361 MKA--------DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSL 411
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + L M G PN + + I+ G SG A+Q ++M+ G+
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 471
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVA + +S RL A +F E+K + P+ +TY +++ S+ E
Sbjct: 472 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA-- 529
Query: 640 CLAVYQDM 647
+ ++ DM
Sbjct: 530 -VKIFYDM 536
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/403 (19%), Positives = 173/403 (42%), Gaps = 25/403 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++ID G ++ I+ L+ N+ +N+L+ + +K + +
Sbjct: 543 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 602
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++ +YN +L C G A ++ + + KG + D+ +Y+T++
Sbjct: 603 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM---LYSMTTKGCIP-DLSSYNTVIY 658
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE-MLQAGCE 430
+ + A + M + P+ T +++ + GL+++A+H+ ++ LQ G +
Sbjct: 659 GLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSK 717
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ C+ L++ ++ +++ + ++ + + L + + ++H KQ
Sbjct: 718 TDRSSCHSLMEGILKKAGIEKSIEF--AEIIASSGITLDDFF-----LCPLIKHLCKQKK 770
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
+ + K F T YN L+ + + L EM+ +G P+
Sbjct: 771 ALEAHELVKKF-----KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 825
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +L+DA G S +E L++ + M G V Y T I V+S+RL+QA L+
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P TY LL + G + + + ++ +M + G
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN---LFNEMLEYG 925
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 755 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 813
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 814 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 869
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 870 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 929
Query: 433 SQCCNILLQACVEACQFDRAFRLFR 457
NILL A ++ LF+
Sbjct: 930 CTIYNILLNGHRIAGNTEKVCHLFQ 954
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C + A E+ VK ++ GV L Y++++ D +A + +M
Sbjct: 761 LIKHLCKQKKALEAHEL---VKKFKSFGV-SLKTGLYNSLICGLVDENLIDIAEGLFAEM 816
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G P+ T++ L++A + +E+ + + EEM + G E N ++ V++ +
Sbjct: 817 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 876
Query: 450 DRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
++A L+ S S T G DG RI + E+ + +
Sbjct: 877 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-------------- 922
Query: 505 FDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ K T YNIL+ + +V L +M G++P+ S+TI+ID
Sbjct: 923 ---EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 49/412 (11%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 337 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 396
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 455
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 456 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 515
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 516 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 575
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 576 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ RL A + +M PN+VTY ++ R G + + L++ ++
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 746
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 212 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 264
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 265 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 324
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 325 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 384
Query: 469 --------GEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 385 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 444
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 445 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 505 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 564
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 565 YGALVDGLCKAGNI 578
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 156/365 (42%), Gaps = 40/365 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
+CG+ G + K+ + +++ + + ++ ++ H K +++ M+ +GV
Sbjct: 432 LCGV-GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 490
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C AG AQ ++ E++ + V TY+ ++ + AK A
Sbjct: 491 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT----VVTYTALIHAYLKAKQVPQA 546
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+ AG PN +T+ +L++ AG + +A ++ +++ +S
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS--------- 597
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
D F TL+ V G DG + ++H + + ++
Sbjct: 598 -------DFYFPCEDRHTLAPNVVTYGALVDGLC-KAHKVDHAHE---------LLDAML 640
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
SS +P Y+ L+ C + + +M G P+ ++T LID
Sbjct: 641 SS-----GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 695
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A+++L M +D +P+VV YT I R ++A L M+ PN+VT
Sbjct: 696 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 755
Query: 621 YITLL 625
Y L+
Sbjct: 756 YTALI 760
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 142/385 (36%), Gaps = 101/385 (26%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G A E G +K + TY+ +V+V + A + +V++
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFG----YRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M +G + T +A G A+ + E + + ++ C ++ +EA
Sbjct: 234 EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEAS 290
Query: 448 QFDRA------------------FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
FD A +R S L K Q+ G RI NM
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL-------GWCKRIINM------M 337
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+T N P + +N L+ + C DY L+N M T G P
Sbjct: 338 MTEGCN-----------------PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380
Query: 548 HISWTILIDA-CG----------------------------------------GSGNVEG 566
++ + I I + CG G G +
Sbjct: 381 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 440
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q++K M G PD Y+ I + ++++AF LF+EMK + P++ TY L+
Sbjct: 441 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 500
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G + + Q ++++M G
Sbjct: 501 SFCKAGLIEQAQW---LFEEMRSVG 522
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 69/328 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 489 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 548
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 549 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 701
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 702 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 738
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGS 561
L++ M G SPN +++T LID G S
Sbjct: 739 KLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 601 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 714
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+V TY+ ++ + ALK+ M G +PN +T+++LI+
Sbjct: 715 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 171/395 (43%), Gaps = 71/395 (17%)
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +N+++N K+ V M K+G+ D A+YNILL CC N + A+ I+
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + ++GV+ D+ ++S ++ + + ALK DM +AG+ P+ + ++ LI
Sbjct: 227 E---MPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G++ +A+ + +EML+ GC + N +L + A LF T
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ T + G DGN ++ + Q + KP TYN
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQR--------------------NLKPDVVTYNT 382
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA--------------------- 557
L+ C ++ +V L N+M + + PNHIS+ ILI+
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442
Query: 558 -------CGG-------SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
C +GN A + L M G+ PD + Y T I ++ + + +AF
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+L +M++ + P+++TY +L SR G + E +
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 537
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 168/377 (44%), Gaps = 65/377 (17%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E L+S+ + ++I NSL+ V + E+Y+ + + GV +
Sbjct: 37 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 96
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C + + +E KGV DV TY+T++ + + A
Sbjct: 97 VYTLNIMINALC---KNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQGLLEEAF 152
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + M G+ P T++++IN G +A + +EML+ G P++ NILL
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL--- 209
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE C+ D + +RI + Q + P+ V
Sbjct: 210 VECCRNDNMM---------------------DAERI--FDEMPSQGV--VPDLV------ 238
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF + +L K C D Y+R +M+ GL+P+++ +TILI
Sbjct: 239 SF---------SALIGLLSKNGCLDQALKYFR------DMKNAGLAPDNVIYTILIGGFC 283
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G + AL++ M E G DVV Y T + + K L +A LF EM + P+
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343
Query: 620 TYITLLRARSRYGSLHE 636
T+ TL+ S+ G++++
Sbjct: 344 TFTTLINGYSKDGNMNK 360
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 174/430 (40%), Gaps = 58/430 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F VR + + R L A+ K ++ C +++ G + IY++
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V +N+Y N ++N + K T +M++ GV D+ +YN L+ A C G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG- 146
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L +E + + + KG LK VFTY+ I+ + A V ++ML G++P+T
Sbjct: 147 --LLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ C + A +F+EM G P+ + L+ + D+A + FR
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K P Y
Sbjct: 264 -----------------------------------------------KNAGLAPDNVIYT 276
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ C + +AL +EM G + +++ +++ + A ++ M E
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD +TT I + + +A +LFE M ++P++VTY TL+ + + +V
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 638 QQCLAVYQDM 647
+ ++ DM
Sbjct: 397 NE---LWNDM 403
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 162/387 (41%), Gaps = 59/387 (15%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
L AL+ + K +P+ I +I G C + + S A + +++ Q L++ +
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIG--GFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310
Query: 295 NSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+++N + L E++ M + GV D ++ L+ GN A ++
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF----E 366
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ + LK DV TY+T++ F + ++ DM+S + PN I++ LIN N G
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V +A L++EM++ G E CN +++ A +A
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA-------------------- 466
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
+ +SNM K P TYN L+ +
Sbjct: 467 ---DEFLSNMLLK------------------------GIVPDGITYNTLINGFIKEENMD 499
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R AL+N+M GL P+ I++ ++++ G ++ A I+ M E G++PD YT+ I
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPN 617
V LK+AF + +EM P+
Sbjct: 560 NGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 58/374 (15%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L N N VF+ L+ V A L+ E ++ ++ G+ + + N LL G
Sbjct: 18 LTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW 77
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA EIY EV + ++++V+T + ++ + + DM GV P+ +
Sbjct: 78 VDLAWEIYQEV----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 133
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LINA GL+E+A L + M G +P N ++ + ++ RA
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA------- 186
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
G D + + P T TYN
Sbjct: 187 -------------KGVLDEML---------------------------KIGMSPDTATYN 206
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ CC + + A + +EM + G+ P+ +S++ LI +G ++ AL+ + M+
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++PD V YT I R+ + +A + +EM ++VTY T+L + L E
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
Query: 638 QQCLAVYQDMWKAG 651
+ ++ +M + G
Sbjct: 327 DE---LFTEMTERG 337
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIYED 281
F + + K ++ A+ ++ + P++ T+ID G C G M K ++ D
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID--GFCKGSEMEKVNELWND 402
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ + N + L+N N + ++ M + G A + + N ++K C AGN
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462
Query: 340 TVLAQEI--------------------------------YGEVKHLEAKGVLKLDVFTYS 367
V A E + V +E G+L DV TY+
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP-DVITYN 521
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F+ Q A + M+ GV P+ T++SLIN +++A + +EMLQ
Sbjct: 522 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 582 GFVPDDK 588
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 49/412 (11%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 286
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 407 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ RL A + +M PN+VTY ++ R G + + L++ ++
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 577
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 532
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 533 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 569
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 594 VRSKRLKQAFSLFEEMKH 611
+ L +A L EMK
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 43 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 96 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 469 --------GEDYDGNTDRISNMEHKDKQSI--------TNTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 396 YGALVDGLCKAGNI 409
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 163/411 (39%), Gaps = 70/411 (17%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 432 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 545
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 644
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
KQ T P ++ Y ++ + ++ EM
Sbjct: 645 ------MKQ--TYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 678
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----------YGSLHEV 637
++++AF L+ EM P L ++ L++ YG HEV
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEV 789
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 650
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 651 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 705 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 169/402 (42%), Gaps = 47/402 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+ I G + + + +++ + + ++ F++L+N + KF E+
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M ++ +Y+ ++ C A+ ++ +L D+ T++T++
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMF----YLTPTKGCSPDIITFNTLIA 401
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AK +K+ +M AG+ NTIT+++LI+ G + A L +EM+ +G P
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N CN LL + + A +F++ SK + ++G
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG----------------- 504
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
+P TYNIL+ + + + L EM G+ P+ I
Sbjct: 505 -------------------VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +ID ++ A Q+ M SPDVV + T I ++ + LF EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEM 605
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I + +TYITL+ + + + L ++Q+M +G
Sbjct: 606 GQRGIVADAITYITLIYG---FRKVDNIDGALDIFQEMISSG 644
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 56/319 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ ++K M+ L + + S+ IL+K C A +G++ L V T++T
Sbjct: 101 ISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG----FHPTVVTFNT 156
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ AL D+ PN +T+++L+N G V +A+ L + ML+ G
Sbjct: 157 LLHGLCVEDRISEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 212
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN ++ + A L R ++ + H
Sbjct: 213 LQPNQITYGTIVDGMCKMGDTVSALNLLR--------------------KMEEVSH---- 248
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+PN YN ++ D A L EM+ + P
Sbjct: 249 -------IIPN---------------VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ +I+ SG A Q+L+ M E ++PDVV ++ I V+ + +A L+
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELY 346
Query: 607 EEMKHYQIQPNLVTYITLL 625
+EM I P+ VTY +++
Sbjct: 347 DEMLPRSIIPSTVTYSSMI 365
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 54/246 (21%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL---- 318
G C GD ++ + +++ S V N+ N+L++ + LK LE++K MQK
Sbjct: 437 GFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 496
Query: 319 -------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS+++
Sbjct: 497 DASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH---RGIVP-DTITYSSMID 552
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--------------- 416
A ++ + M S +P+ +T+++LI AG+V+
Sbjct: 553 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVA 612
Query: 417 --------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
A+ +F+EM+ +G P++ +L + +RA +
Sbjct: 613 DAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAML 672
Query: 457 RSWTLS 462
+S
Sbjct: 673 EDLQMS 678
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 41/174 (23%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP T+ LM C + V+A L++ M GL PN I++ ++D G+ AL
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238
Query: 570 ILKIMRE---------------DGM---------------------SPDVVAYTTAIKVC 593
+L+ M E DG+ PD+V Y I
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S R A L +EM +I P++VT+ L+ A + G E ++ +Y +M
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEE---LYDEM 349
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ ILMK C+ AL ++ +G P +++ L+ + AL + M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
P+VV +TT + R R+ +A +L + M +QPN +TY T++ + G
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 231
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V +L +M + + N S+TIL+ + AL + + G P VV + T +
Sbjct: 100 VISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLH 159
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ +A LF +M +PN+VT+ TL+ R G V + +A+ M + G
Sbjct: 160 GLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREG---RVVEAVALLDRMLEDG 212
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 174/377 (46%), Gaps = 34/377 (9%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V N+Y +N L+ L+ + V +M+ G + +YN L+ A C AG
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ + V + +G K ++ T++++V A + A KV ++M+ G+ P+ ++++
Sbjct: 64 AERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSW 459
+L++ G + +++ +F EM Q G P+ L+ A +A ++A L R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTY 518
L +V DG + F+ ++ + + ++ +P+ Y
Sbjct: 181 GLRMNEVTFTALIDGFCKK----------------GFLDDALLAVEEMRKCGIQPSVVCY 224
Query: 519 NILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
N L+ C D R L+ EM + P+ ++++ +I GN++ A Q+ + M
Sbjct: 225 NALINGYCKLGRMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD + Y++ I+ KRL A LFE M +QP+ TY TL+ + G+
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN- 341
Query: 635 HEVQQCLAVYQDMWKAG 651
V++ L+++ +M + G
Sbjct: 342 --VEKALSLHDEMIRKG 356
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 37/386 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 157
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R + + + G GN D
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 278 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
K+A L ++ H P+ + Y L+
Sbjct: 378 KEAHRLLFKLYHEDPVPDNIKYDALM 403
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 23/253 (9%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ GV PN T++ L+ A G +E+A+ + +M AGC PN+ N L+ A A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 449 FDRAFR---LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
D A R L R +K + + ME K F
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK----------------VF 104
Query: 506 DK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D+ R P +YN L+ C + A+ +EM GL P+ +++T LI A +
Sbjct: 105 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 164
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN+E A+ ++ MRE G+ + V +T I + L A EEM+ IQP++V Y
Sbjct: 165 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224
Query: 622 ITLLRARSRYGSL 634
L+ + G +
Sbjct: 225 NALINGYCKLGRM 237
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 264
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 324
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 325 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 365
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485
Query: 588 TAIK 591
+ ++
Sbjct: 486 SLVR 489
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++R + ++ +N+L+N + E+ + M+ V D+ +Y+ ++ C
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 269
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ + + KGVL D TYS++++ + K A ++ E+ML GV P+
Sbjct: 270 GNLDSAFQLN---QKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 325
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-F 456
T+++LI+ G VE+A+ L +EM++ G P+ ++L+ ++ + A RL F
Sbjct: 326 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 385
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------S 510
+ + + V YD S E K ++ F DK + +
Sbjct: 386 KLY--HEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDRN 441
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT---------------- 552
+K + Y+IL+ C KAL +M G SPN S
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501
Query: 553 -------------------ILIDACGGSGNVEGALQILKIMREDGMSP 581
LID GNV+ + +L M DG+ P
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 269 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 317
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 318 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 375
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 376 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 435
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 436 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 492 FEEGMVVEADNAIQDLL 508
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G++P+V Y ++ RL++A + +M+ PN VTY TL+ A R G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 634 LHEVQQCLAVYQDMWKA 650
L ++ +++ ++ A
Sbjct: 61 LDGAERVVSLMREEGNA 77
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 192/439 (43%), Gaps = 50/439 (11%)
Query: 208 NLAIRYACIVPRADILFCNFVREFGKK------RDLVSAL----------RAYDASKKHL 251
NL I AC V R V+++G K L+SAL Y K
Sbjct: 143 NLEIHSACEVFRR-------VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195
Query: 252 SSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN-----AHD 304
PN+ I+ G+C G K+ + ED+++ + NI +N+L++ + A
Sbjct: 196 IQPNLTTFNIFIN--GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGK 253
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + K M + + ++N L+ C N + A+ + E++ + LK ++
Sbjct: 254 MYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ----RQGLKPNIV 309
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY++++ ++ A+ + + M+ G+ PN +T+++LIN ++++A LF+++
Sbjct: 310 TYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ PN+ N ++ A +A + F L S L E N + +
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS--------MLDEGIFPNVSTYNCL-- 419
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ N + + + K TYNIL+ C D KA L+ EM V
Sbjct: 420 --IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PNH+++ L+D GN++ AL++ M ++G +VV Y IK ++ +L+ A
Sbjct: 478 GVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDA 537
Query: 603 FSLFEEMKHYQIQPNLVTY 621
L EM + PN TY
Sbjct: 538 NRLLNEMLEKGLNPNRTTY 556
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 17/368 (4%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N+ FN +N A L +V ++++ G ++ +YN L+ C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ +K + A + ++ T++T++ F + A E+M G+
Sbjct: 247 KKGSAGKMYRADAILKEMLANKICPNEI-TFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++SLIN +N G +++A+ L+++M+ G +PN N L+ + A +L
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F +D N + M ++ F H S D+ P
Sbjct: 366 FDDIA--------EQDLVPNAITFNTMIDAFCKAGMMEEGFA--LHNSMLDE--GIFPNV 413
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+TYN L+ C + K L+NEM L + +++ ILI G A ++L
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G+ P+ V Y T + LK A + +M+ + N+VTY L++ + G
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533
Query: 634 LHEVQQCL 641
L + + L
Sbjct: 534 LEDANRLL 541
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 144/338 (42%), Gaps = 58/338 (17%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M K + ++ ++NI + C AG A+++ ++K A G ++ TY+T++
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK---AWG-FSPNIVTYNTLI 242
Query: 371 ----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
K + K ++ +KE ML+ + PN IT+++LI+ V A + FEEM +
Sbjct: 243 DGHCKKGSAGKMYRADAILKE-MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQR 301
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G +PN N L+ + D A L+ V LG
Sbjct: 302 QGLKPNIVTYNSLINGLSNNGKLDEAIALWDK------MVGLG----------------- 338
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGL 544
KP T+N L+ C + L +++ L
Sbjct: 339 ------------------------LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL 374
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++ +IDA +G +E + M ++G+ P+V Y I R++ ++ A
Sbjct: 375 VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
L EM++Y+++ ++VTY L+ + G + ++ L
Sbjct: 435 LLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 49/269 (18%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V ++M+ + PN T++ IN AG + +A + E++ G PN N L+
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG-- 244
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ A +++R+ + K +A ++I
Sbjct: 245 -HCKKGSAGKMYRADAILKEMLA---------NKIC------------------------ 270
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T+N L+ C D K EM+ GL PN +++ LI+ +G
Sbjct: 271 --------PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ + M G+ P++V + I + K +K+A LF+++ + PN +T+
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ A + G + E A++ M G
Sbjct: 383 TMIDAFCKAGMMEE---GFALHNSMLDEG 408
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 562 GNVEGALQ-ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
GN G +Q + K M + + P++ + I ++ +L +A + E++K + PN+VT
Sbjct: 178 GNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVT 237
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDM 647
Y TL+ + GS ++ + A+ ++M
Sbjct: 238 YNTLIDGHCKKGSAGKMYRADAILKEM 264
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 170/408 (41%), Gaps = 57/408 (13%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------ 341
N +FNSL++ NA D + ++ K M G +YNI + + C G +
Sbjct: 176 NPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC-GGEELPSPDLL 234
Query: 342 -LAQEIYGE--------------------------------VKHLEAKGVLKLDVFTYST 368
LA+++Y E +K + KG + D TYS
Sbjct: 235 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVP-DTSTYSK 293
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +A + A + ++M S GV P+ T++ LI++ AGL+EQA F+EM G
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C N LL A ++A Q +A +F T++ + + G G +
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
+ K + T + V + Y S P TY L+ C + V A L++
Sbjct: 414 EVYTK----LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDA 469
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + G PNHI + LID G ++ A ++ M + G P V YT+ I + +R
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L A + +M PN+VTY ++ R G + + L++ ++
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 216/507 (42%), Gaps = 70/507 (13%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNM 256
QL K +N+ ++ C P LF + V + RD AY K+ P
Sbjct: 157 QLGWCKRIINMMMKEGC-NPNPS-LFNSLVHSYCNARDYP---YAYKLLKRMADCGCPPG 211
Query: 257 YICRTII--DVCGICGDYMKS-------RAIYEDLRSQNVTLN-IYVFN---SLMNVNAH 303
Y+ I +CG G+ + S +YE++ + + LN + N L +
Sbjct: 212 YVAYNIFIGSICG--GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ F ++ K M G + D ++Y+ ++ C A A ++ E+K + GV DV
Sbjct: 270 DMAF--QIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV---GV-NPDV 323
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+ ++ F A + A ++M S G + N +T+++L++A A + QA +F
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISN- 481
M+ AGC PN+ + L+ +A + +A ++ + V ++G +TD I+
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 482 ------------MEHK--DKQSITNT-------PN-FVPNSHYSSFDK------------ 507
HK D Q + + PN + ++ F K
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 508 ---RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
+ + PT TY L+ A D A+ +++M +PN +++T +ID G
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL++L +M E G SP+VV YT I +S ++ + LF +M PN VTY
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYR 623
Query: 623 TLLRARSRYGSLHEVQQCLA-VYQDMW 648
L+ G L E L+ + Q W
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQTYW 650
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 158/388 (40%), Gaps = 45/388 (11%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A + V K M + G D + +A C G + +
Sbjct: 43 YNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR-------WSDAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A + A+ M PN +T+ +L+
Sbjct: 96 VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------------SW 459
+ + M++ GC PN N L+ + A + A++L + ++
Sbjct: 156 KQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAY 215
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF- 509
+ + GE+ + D ++ E ++ + NT NF FD F
Sbjct: 216 NIFIGSICGGEELP-SPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C KA L EM++VG++P+ ++TILID+
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G +E A MR G S +VV YT + +++K+L QA +F M PN +
Sbjct: 335 KAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTI 394
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ + G E+Q+ VY +
Sbjct: 395 TYSALVDGLCKAG---EIQKACEVYTKL 419
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 163/386 (42%), Gaps = 45/386 (11%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
D + S +E + ++ N+ + +L++ AH + E+ M G + Y+
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L+ C G AQE++ + G L V TY++++ + +A+KV
Sbjct: 484 ALIDGFCKVGKIDNAQEVF---LRMSKCGYLP-TVHTYTSLIDAMFKDRRLDLAMKVLSQ 539
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ + TPN +T++++I+ G ++A+ L M + GC PN L+ ++ +
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY------------DGNTDRISNMEHKDKQSITNTPNF 496
D + +LF + + +Y G D ++ + KQ T P +
Sbjct: 600 VDLSLQLF----IQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ--TYWPKY 653
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ Y S + FS K + L+ E+ + G P + +LID
Sbjct: 654 LQG--YCSVVQGFSKK----------------FIASLGLLEELESHGTVPIAPVYGLLID 695
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+G +E AL++ K M E S ++ + YT+ I+ + +L++AF L+ E+
Sbjct: 696 NFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKG 755
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQ 639
+ P L ++ L++ + +E Q
Sbjct: 756 VVPELSVFVCLIKGLIKVNKWNEALQ 781
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K R L A++ + +PN+ +ID G+C G+ K+ + + + + N
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMID--GLCRIGECQKALKLLSMMEEKGCSPN 583
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + +L++ + + +L+++ M G + +Y +L+ CC AG A +
Sbjct: 584 VVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 643
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L+ Y ++V+ F+ K + +L + E++ S G P + LI+
Sbjct: 644 EMKQTYWPKYLQ----GYCSVVQGFS--KKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNI---LLQACVEACQFDRAFRLFRSWT 460
+ AG +E+A+ L +EM++ N ++ L+QA A Q ++AF L+ T
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEIT 752
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 180/401 (44%), Gaps = 29/401 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 449 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 508
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 509 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 564
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 565 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 624
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 625 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 669
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 670 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 729
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 730 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 789
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 790 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMG 827
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 479 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 538
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 539 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 594
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 595 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 654
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 713
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 714 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 755
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 756 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 815
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 816 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 868
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 189/461 (40%), Gaps = 65/461 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 302 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 361
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 362 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 421
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 422 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 480
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 481 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 540
Query: 457 RSWTLS--KTQVALGEDYD------GNTDRISNMEHKDKQSITNTPN---FVP--NSHYS 503
K V L + GN DR K+ Q + + P F+P + +
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAK 599
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
S D R S + PT T+N L+ KA +++EM G+S N +
Sbjct: 600 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 659
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 660 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I N Y L+ +R G + E + Q M K G
Sbjct: 720 ARNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 757
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 612
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 672
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 673 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 728
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 729 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 781
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 782 ----------------TQTIEEME------------------------ALGVKPNIKTYT 801
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 802 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 861
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 862 KEMVEAGLIVDM 873
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 34/376 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLL 625
+ PN VTY L+
Sbjct: 522 VDDGLCPNEVTYTALI 537
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGH-SANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M A D Y + M + G+ PN + + +I+A GNV A I+K + E MSP
Sbjct: 195 MTAAVMDRY------HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP 248
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D YT+ I R L A +F +M +PN VTY TL+ G ++E
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 34/376 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLL 625
+ PN VTY L+
Sbjct: 522 VDDGLCPNEVTYTALI 537
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGH-SANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M A D Y + M + G+ PN + + +I+A GNV A I+K + E MSP
Sbjct: 195 MTAAVMDRY------HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP 248
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D YT+ I R L A +F +M +PN VTY TL+ G ++E
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 205/484 (42%), Gaps = 80/484 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
K DE +RI+ N KPDV + I+ C R + +
Sbjct: 369 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 428
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +FG D S + ++A K + N+ +ID G ++ ++++++
Sbjct: 429 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 488
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K+M G + ++ + + +G ++
Sbjct: 489 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 548
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 549 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+R+F
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL--- 661
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 662 --------------------------------------------KEMNLEPTDGTYNTLL 677
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 678 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 737
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 738 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 796
Query: 641 LAVY 644
+ Y
Sbjct: 797 IKDY 800
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 171/414 (41%), Gaps = 53/414 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG----------------------- 366
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
A + M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 367 ----------QAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ F D Q +++ M + G N + ++++I+A
Sbjct: 417 K----KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 472
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 473 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH------GP 526
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 579
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+A
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 693
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 171/383 (44%), Gaps = 56/383 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L ++NSL+ V+ + + ++
Sbjct: 845 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 903
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 904 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 959
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 960 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 1019
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 1020 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 1048
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
P +Y I++ C L ++ +GL P+ I+
Sbjct: 1049 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1092
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A ++EE+
Sbjct: 1093 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1152
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+PN+ TY L+R S GS
Sbjct: 1153 TKGWKPNVFTYNALIRGYSVSGS 1175
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 175/428 (40%), Gaps = 24/428 (5%)
Query: 225 CNFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN++ E + V + +D ++ + N+ I G+ G + ++
Sbjct: 218 CNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK 277
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ LN Y +N L+ V + + LEVY+ M GV+ + +Y++L+ A G
Sbjct: 278 EAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF---GKRR 334
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+ + ++ +EA GV K +V++Y+ ++V AK + A ++ M + G P+ IT
Sbjct: 335 DVETVLWLLREMEAHGV-KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 393
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI +AG + A +F +M ++ +P+ LL + + W
Sbjct: 394 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI---WNA 450
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K DG D + F + K+ P +YN L
Sbjct: 451 MKA--------DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM-KQKGIVPEQYSYNSL 501
Query: 522 MKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + L M G PN + + I+ G SG A+Q ++M+ G+
Sbjct: 502 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 561
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVA + +S RL A +F E+K + P+ +TY +++ S+ E
Sbjct: 562 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA-- 619
Query: 640 CLAVYQDM 647
+ ++ DM
Sbjct: 620 -VKIFYDM 626
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 147/329 (44%), Gaps = 31/329 (9%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C + A E+ VK ++ GV L Y++++ D +A + +M
Sbjct: 851 LIKHLCKQKKALEAHEL---VKKFKSFGV-SLKTGLYNSLICGLVDENLIDIAEGLFAEM 906
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G P+ T++ L++A + +E+ + + EEM + G E N ++ V++ +
Sbjct: 907 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 966
Query: 450 DRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
++A L+ S S T G DG RI + E+ + +
Sbjct: 967 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-------------- 1012
Query: 505 FDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ K T YNIL+ + +V L +M G++P+ S+TI+ID +G
Sbjct: 1013 ---EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ L + + E G+ PD++ Y I +SKRL++A SLF EM+ I PNL TY
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ + G E + +Y+++ G
Sbjct: 1130 SLILHLGKAGKAAEAGK---MYEELLTKG 1155
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ Y SP ++D G + ++ ++ N
Sbjct: 962 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 1021
Query: 293 VFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+N + A + + ++++M G+ D+ SY I++ C AG + ++
Sbjct: 1022 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 1081
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L+ D+ TY+ ++ +K + A+ + +M G+ PN T++SLI
Sbjct: 1082 LEMG----LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1137
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG +A ++EE+L G +PN N L++ + D A+ +
Sbjct: 1138 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
I G+ K +++D+ Q + +I + +++ A L L ++ + ++G+ D+
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+L+ G + +E ++ KG++ +++TY++++ A A K+
Sbjct: 1092 TYNLLIDGL---GKSKRLEEAVSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAEAGKM 1147
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
E++L+ G PN T+++LI + +G + A + M+ GC PN
Sbjct: 1148 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ IID G + L + ++ +N L++ + L+ +
Sbjct: 1052 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1111
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQK G++ ++ +YN L+ AG A ++Y E L KG K +VFTY+ ++
Sbjct: 1112 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE---LLTKG-WKPNVFTYNALI 1167
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ + A M+ G PN+ T SS ++ G V + + A E
Sbjct: 1168 RGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHRSYHNAK-E 1226
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
P ++ L + C+ A ++ W + V
Sbjct: 1227 PTTKAWRWLSKGCLRRAAAGNAQQIADGWRMHNHSV 1262
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 49/412 (11%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 286
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 407 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ RL A + +M PN+VTY ++ R G + + L++ ++
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 577
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 159/401 (39%), Gaps = 78/401 (19%)
Query: 275 SRAIYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ IY ++ + N LN + V N L V D F L K M + G + D ++Y+ +
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL--IKEMMRKGFVPDTSTYSKV 294
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C A A ++ E+K + GV DV+TY+ ++ F A + A + E+M
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMV---GVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +P +T+++LI+A A V QA +F M+ AGC PN L+ +A
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+AF ++ + T + + Y + R +
Sbjct: 411 KAFEVY-------------------------------AKLIGTSDSADSDFYFPCEDRHT 439
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDA----------- 557
P TY L+ C + L++ M + G PNHI + LID
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 558 --------CG----------------GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
CG G ++ A+++L M +D +P+VV YT I
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R ++A L M+ PN+VTY L+ + G +
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 532
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 533 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 569
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 594 VRSKRLKQAFSLFEEMKH 611
+ L +A L EMK
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A + V K M + G D + A C G + +
Sbjct: 43 YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR-------WADAL 95
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A ++ A+ M PN +T+ +L++
Sbjct: 96 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + M+ GC PN N L+ + + A++L T
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 469 --------GEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF-- 509
G++ + D + E + + N NF FDK F
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 510 -------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY+ ++ C T + L EM+ VG++P+ ++TILID+
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A + + MR G SP VV YT I +++K++ QA +F M +PN VT
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 621 YITLLRARSRYGSL 634
Y L+ + G++
Sbjct: 396 YGALVDGLCKAGNI 409
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 156/390 (40%), Gaps = 59/390 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 432 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 545
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 644
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
T P ++ Y ++ + ++ EM
Sbjct: 645 --------MKQTYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 678
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++AF L+ EM P L ++ L++
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 650
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 651 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 705 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 166/365 (45%), Gaps = 57/365 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + ++ +++ + +++N D+ L + K M+K + A++ YN ++
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C + A +++ + +E KG+ K DVFTY++++ + W A ++ DM+ +
Sbjct: 267 CKYKHMDDAFDLFNK---METKGI-KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++SLI+A A G + +A LF+EM+Q +PN N L+ C DR
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDE 379
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +TL ++ L P
Sbjct: 380 AQQIFTLMVSKDCL--------------------------------------------PD 395
Query: 515 TTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+K C RV+ L EM GL N +++ LI +G+ + A +I
Sbjct: 396 VVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M DG+ PD++ Y+ + + +L++A +FE ++ +++PN+ TY ++ +
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 632 GSLHE 636
G + +
Sbjct: 515 GKVED 519
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 44/415 (10%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+ILL C LA + G++ L + D+ T S+++ + K
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEP----DIVTLSSLLNGYCHGKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++LI+ +A+ L + M+ GC+P+ ++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVAL------------GEDYDGNTDRISNMEHKDKQS 489
+ D A L + K + + + D D + ME K +
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289
Query: 490 ITNTPNFVPN-----SHYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--LM 536
T N + + +S + S P T+N L+ A + ++A L
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+EM + PN +++ LI+ ++ A QI +M PDVV Y T IK ++
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
KR+++ LF EM + N VTY TL++ + G Q+ +++ M G
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK---IFKKMVSDG 461
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 55/361 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+++ ++I G + + + D+ + + N+ FNSL++ A + K ++
Sbjct: 289 PDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + ++ +YN L+ C+ AQ+I+ + +K L DV TY+T++K
Sbjct: 349 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF---TLMVSKDCLP-DVVTYNTLIK 404
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G P
Sbjct: 405 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 464
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ +ILL + + ++A +F SK +
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKME-------------------------- 498
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
P TYNI+++ C L + G+ PN I
Sbjct: 499 ---------------------PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+T +I G E A + + M+EDG PD Y T I+ +R + L +EM
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597
Query: 610 K 610
+
Sbjct: 598 R 598
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 150/355 (42%), Gaps = 56/355 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+K C A E++ E+ G + TY+T++
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYNTLI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN NI+++ +A + + + LF S +L
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP Y ++ C + AL EM+ G P+
Sbjct: 531 -------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 625
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 168/403 (41%), Gaps = 59/403 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ + T +D GD K RAI+ED++ ++ ++ L++ A + T +
Sbjct: 22 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSI 81
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTI 369
+ M++ G D +YN ++ C +G A E E VKH+ V TY +I
Sbjct: 82 FHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPT------VATYGSI 135
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A A + E+ S G+ N I +SSLI+ G +++A + EEM++ G
Sbjct: 136 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 195
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ A V+A + + A F+S
Sbjct: 196 APNVYTWNSLMDALVKAEEINEALICFQSM------------------------------ 225
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
K P T TY+IL+ C Y + EM+ GL PN
Sbjct: 226 -----------------KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 268
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T +I GN+ A + + + +G PD ++ I+ + R +A+ +FE
Sbjct: 269 VVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFE 328
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
E + + N+ I+LL A ++ + + AV +++ K+
Sbjct: 329 ETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLREIAKS 371
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + + + K L A ++ +K N+ + ++ID G G ++
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 184
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I E++ + + N+Y +NSLM+ V A ++ L +++M+++ + +Y+IL+
Sbjct: 185 LILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 244
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ K L +V TY+T++ A A + E + G
Sbjct: 245 CRVQKYNKAFVFWQEMQ----KQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGG 300
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVE 445
P+ ++++LI ++A +A H+FEE GC N + C LL A C+E
Sbjct: 301 IPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIE 356
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 242 RAYDASK----KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+AY+A + KH+ P + +IID ++ ++E+ +S+ + LN+ V++SL
Sbjct: 112 KAYEALEEMKVKHVP-PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 170
Query: 298 MN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++ V D + + + M K G+ ++ ++N L+ A V A+EI +
Sbjct: 171 IDGFGKVGRIDEAYL--ILEEMMKKGLAPNVYTWNSLMDA------LVKAEEINEALICF 222
Query: 354 EAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ +K + +TYS ++ + + A ++M G+ PN +T++++I+ A
Sbjct: 223 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKV 282
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G + A LFE G P++ N L++ A + A+ +F L ++
Sbjct: 283 GNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRI 337
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 508 RFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R +P T N M D + +A+ +++ G P+ S++ILI +G
Sbjct: 17 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 76
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I M++ G + D AY + +S ++ +A+ EEMK + P + TY +++
Sbjct: 77 ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSII 136
Query: 626 RARSRYGSLHE 636
++ L E
Sbjct: 137 DGLAKIDRLDE 147
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 14/238 (5%)
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G E +F+EM + GC+P+ N + +A ++ +F G
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK--------GYG 54
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
+ + S + H +T S K+ F YN ++ C
Sbjct: 55 FLPDVRSYSILIH----GLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKV 110
Query: 532 VKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
KA + EM+ + P ++ +ID ++ A + + + G+ +V+ Y++
Sbjct: 111 DKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 170
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + R+ +A+ + EEM + PN+ T+ +L+ A + ++E C ++M
Sbjct: 171 IDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEM 228
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 34/376 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 167 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 226 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 503 SSFDKRFSF-----------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F P TYN ++K C D + +MN M G S N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 610 KHYQIQPNLVTYITLL 625
+ PN VTY L+
Sbjct: 522 VDDGLCPNEVTYTALI 537
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 318 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + ++ TY+ ++
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGCSPNIVTYNEMI 432
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 544
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 545 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 700
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 270
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 271 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 320
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 321 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 351
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N+ + +K+
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGH-SANLVTYNTII 467
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 575
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 696 MIKAGCQPTLWTYGVLIKG 714
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 518
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 579 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 695 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 873
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 874 VLIDGLLRDG 883
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M A D Y + M + G+ PN + + +I+A GNV A I+K + E MSP
Sbjct: 195 MTAAVMDRY------HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP 248
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D YT+ I R L A +F +M +PN VTY TL+ G ++E
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 31/394 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C GD R + +++ ++ V N+ +N+ + DL E+ M+K GV
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 293
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y +L+ G AQ ++ E++ KG+ + DV+ Y++I+ + + A
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE---KGI-EADVYVYTSIISCNCRSGNVKRA 349
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + ++M G+ P+ T+ +LI+ AG +E A L EM G + N N L+
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPN 499
E+ D A RL + + L D Y+ + + KD+
Sbjct: 410 YCESGMVDEALRL----QVVMEKKGLESDVFAYNSIASGLCKLNRKDE---------AKG 456
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S ++ S P T ++ L+ C + + K + EM G PN I++ +LID
Sbjct: 457 LLFSMVERGVS--PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++ A ++ + G+ PDV T+ I ++ A LF+EM + PN
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY ++ S+ G ++ +Y +M + G
Sbjct: 575 VVTYTAMISGLSKDG---RSEEAFKLYDEMKETG 605
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V+ N F +L+++ + F V++ M++ G + ++ +YN+L+ GN
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 523
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ E LE +G++ DV+T ++++ MALK+ ++M G+ PN +T++
Sbjct: 524 AHKLKDE---LENRGLIP-DVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 579
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++I+ + G E+A L++EM + G P+
Sbjct: 580 AMISGLSKDGRSEEAFKLYDEMKETGLTPD 609
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
SPN T+ID+ G++++++ ++ ++ + NI +N L++ AH
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK LE G++ D+ + L+ C+ G +A +++ E+ +G++ +V
Sbjct: 527 LKDELE------NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ---RGLVP-NVV 576
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
TY+ ++ + + A K+ ++M G+TP+ +SSL+ + +A
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 198/466 (42%), Gaps = 33/466 (7%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 146 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 205
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 206 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 265
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 266 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 321
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M+ G TP+ ++++I+ G +E A + M G +PN C N LL+
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRI-----SNMEHK-DKQSIT 491
A +++ L + L + D+ +G DR+ +EH IT
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 441
Query: 492 NTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
T D+ KP T +Y I++K C+ V A LM++M
Sbjct: 442 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +
Sbjct: 502 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 562 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 607
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 160/397 (40%), Gaps = 30/397 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ L+ E+
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 412
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
N+ I+L+ A ++ A L + L+ ++ +
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532
Query: 487 KQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
KQ + N +P+ + S T + L KA TD L+N M G+
Sbjct: 533 KQMLVNGCSPDLISYS---------------TVIDGLGKAGKTD--EALELLNVMVNKGM 575
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN I ++ + A G + +Q+ +++ + D V Y I + ++A
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M PN TY L+R + G + E Q+ L
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 237
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 238 ----AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 293
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + L+ A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ M Y ++PN+V Y TLL+ E ++ LA
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 31/394 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C GD R + +++ ++ V N+ +N+ + DL E+ M+K GV
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 297
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y +L+ G AQ ++ E++ KG+ + DV+ Y++I+ + + A
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE---KGI-EADVYVYTSIISCNCRSGNVKRA 353
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + ++M G+ P+ T+ +LI+ AG +E A L EM G + N N L+
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPN 499
E+ D A RL + + L D Y+ + + KD+
Sbjct: 414 YCESGMVDEALRL----QVVMEKKGLESDVFAYNSIASGLCKLNRKDE---------AKG 460
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S ++ S P T ++ L+ C + + K + EM G PN I++ +LID
Sbjct: 461 LLFSMVERGVS--PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++ A ++ + G+ PDV T+ I ++ A LF+EM + PN
Sbjct: 519 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY ++ S+ G ++ +Y +M + G
Sbjct: 579 VVTYTAMISGLSKDG---RSEEAFKLYDEMKETG 609
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V+ N F +L+++ + F V++ M++ G + ++ +YN+L+ GN
Sbjct: 468 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 527
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ E LE +G++ DV+T ++++ MALK+ ++M G+ PN +T++
Sbjct: 528 AHKLKDE---LENRGLIP-DVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 583
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++I+ + G E+A L++EM + G P+
Sbjct: 584 AMISGLSKDGRSEEAFKLYDEMKETGLTPD 613
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHD 304
SPN T+ID+ G++++++ ++ ++ + NI +N L++ AH
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK LE G++ D+ + L+ C+ G +A +++ E+ +G++ +V
Sbjct: 531 LKDELE------NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ---RGLVP-NVV 580
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
TY+ ++ + + A K+ ++M G+TP+ +SSL+ + +A
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 49/412 (11%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ ++ N +FNSL++ N D + ++ M G YNI + + C
Sbjct: 103 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162
Query: 336 LAGNTVL--AQEIYGE--------------------------------VKHLEAKGVLKL 361
L +L A++IYGE +K + KG +
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP- 221
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TYS ++ A + A + ++M GVTP+ T++ LI++ AGL+EQA LF
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NT 476
EEM GC P L+ A ++A Q +A +F V G DG
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
IS + + T + + Y + R + P TY L+ C +
Sbjct: 342 GNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M + G PNHI + LID +G ++ A ++ M + G P V YT+ I
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ RL A + +M PN+VTY ++ R G + + L++ ++
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 512
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 180/461 (39%), Gaps = 88/461 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-------DYMK- 274
LF + V + ++D A + + P Y+ I + ICG D +
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTT-CGCPPGYVVYNIF-IGSICGQEKLPSPDLLDL 171
Query: 275 SRAIYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ IY ++ + N LN + V N L V D F L K M + G + D ++Y+ +
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL--IKEMMRKGFVPDTSTYSKV 229
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C A A ++ E+K + GV DV+TY+ ++ F A + A + E+M
Sbjct: 230 ITFLCHATKVEKAFLLFQEMKMV---GVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMR 285
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +P +T+++LI+A A V QA +F M+ AGC PN L+ +A
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+AF ++ + T + + Y + R +
Sbjct: 346 KAFEVY-------------------------------AKLIGTSDSADSDFYFPCEDRHT 374
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDA----------- 557
P TY L+ C + L++ M + G PNHI + LID
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Query: 558 --------CG----------------GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
CG G ++ A+++L M +D +P+VV YT I
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R ++A L M+ PN+VTY L+ + G +
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 160/397 (40%), Gaps = 69/397 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++Y +ID G +++ ++E++RS + + + +L++ + A + +
Sbjct: 255 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 314
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------LEAKGV 358
++ M G + +Y L+ C AGN A E+Y ++ E +
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V TY +V A A ++ + MLS+G PN I + +LI+ AG ++ A
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD- 477
+F +M + G P+ L+ DR F+ DG D
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLI---------DRMFK------------------DGRLDL 467
Query: 478 --RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
++ + KD + TPN V TY ++ C KA
Sbjct: 468 AMKVLSQMLKD----SCTPNVV-------------------TYTAMIDGLCRIGESEKAL 504
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L++ M G SPN +++T LID G +G ++ +L + M G SP+ V Y I
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ L +A L EMK L Y ++ S+
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK 601
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 156/390 (40%), Gaps = 59/390 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN-- 299
+ +H +PN+ ++D G+C + A + + + S N V+++L++
Sbjct: 367 FPCEDRHTLAPNVVTYGALVD--GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 424
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + EV+ M K G + + +Y L+ G LA ++ ++ K
Sbjct: 425 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM----LKDSC 480
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + ALK+ M G +PN +T+++LI+ AG ++ ++
Sbjct: 481 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 540
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF +M + GC PN +L+ L + L K ++ LGE
Sbjct: 541 LFTQMSRKGCSPNYVTYRVLIN------------HLCAAGLLDKARLLLGE--------- 579
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
T P ++ Y ++ + ++ EM
Sbjct: 580 --------MKQTYWPKYLQG------------------YRCAIQGFSKSFIASLGILEEM 613
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSK 597
+ G P + +LID +G +E A+++ K M E + D Y + I+ +
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++AF L+ EM P L ++ L++
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKG 703
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ +ID G+C G+ K+ + + + + N+ + +L
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMID--GLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + +L+++ M + G + +Y +L+ C AG A+ + GE+K
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYW 585
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y ++ F+ K + +L + E+M S G P + LI+ + AG +E
Sbjct: 586 PKYLQ----GYRCAIQGFS--KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 639
Query: 416 QAMHLFEEMLQ--AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
AM L +EM++ + + ++ L+QA A Q + AFRL+ T
Sbjct: 640 IAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 115/336 (34%), Gaps = 100/336 (29%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+D FT W AL + +ED +T+ + +I+ A ++AM
Sbjct: 8 MDRFTVGCFAHALCKEGRWADALDMIEREDF-----KLDTVLCTHMISGLMEASYFDEAM 62
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
M C PN +R S L K Q+ G R
Sbjct: 63 SFLHRMRCNSCIPNVV-----------------TYRTLLSGFLKKKQL-------GWCKR 98
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
I NM +T N P + +N L+ + C DY L+
Sbjct: 99 IINM------MMTEGCN-----------------PNPSLFNSLVHSYCNEKDYAYAYKLL 135
Query: 537 NEMRTVGLSPNHISWTILIDA-CG------------------------------------ 559
N M T G P ++ + I I + CG
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195
Query: 560 ----GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G G + A Q++K M G PD Y+ I + ++++AF LF+EMK +
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++ TY L+ + + G + + Q ++++M G
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQW---LFEEMRSVG 288
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 172/397 (43%), Gaps = 33/397 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLG 319
V G C G +R + +++ V LN +N L++ +D + EV K M+ G
Sbjct: 140 VDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVA-EVLKEMESGG 198
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + +Y IL+ AG+ + ++ E+K G DV+ YS ++ + A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG----DVYFYSAVINAYCRAGNV 254
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A +V ++ + G+ PN T+ +LIN G +E A L +M G N N +
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTP 494
+ D+A + + + + L + Y NT R++ ME K T
Sbjct: 315 IDGYCRHGMVDKALEI--KAVMERMGIQL-DVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
N V S+Y S+ TT +I K D + L +M G P+ +++ ++
Sbjct: 372 NGV-ESNYVSY---------TTLISIHSKE--GDMVEARRLFRDMEGKGSRPSVVTYNVM 419
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID SG++ A + K M + G+ PDV Y + + ++ A LFEEMK
Sbjct: 420 IDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGA 479
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN+V Y L+ ++ G E Q Y +M AG
Sbjct: 480 KPNVVAYTALISGLAKEGRSEEAFQ---FYDNMLAAG 513
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 193/457 (42%), Gaps = 56/457 (12%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
EF K ++S + +K P++ +ID GD + A+ + + ++ +
Sbjct: 172 EFDKADTVISEM------EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKP 225
Query: 290 NIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I FNS++ +F EV++ M + V D+ S+NIL+ C G A + Y
Sbjct: 226 GIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFY 285
Query: 348 GEVKHL------------------------------EAKGV-LKLDVFTYSTIVKVFADA 376
E++ E KG+ L D Y+ ++ F A
Sbjct: 286 KEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
AL+V+++M+ G P+ +T+++L+N + A L EM + G P+
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ F++A +LF + + L D I M K + N
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQR----LRPDVVAYNSLIDGMCRKGDLAKAN---- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ R F P TY+IL+ + C +A ++EM + G PN +++ +
Sbjct: 458 ---ELWDDMHAREIF-PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I SGNV+ Q L+ M +D + PD++ + T I ++ + + AF++F M+ +
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QP+ VTY ++ S G++ E + V++ M +G
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGR---VFKKMGASG 607
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 179/429 (41%), Gaps = 34/429 (7%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E FR + C PDV +IL F R ++ A++ Y ++
Sbjct: 248 EVFRAMDQCSVAPDVR----------SFNILIGGFCR----VGEVEEAMKFYKEMQQRGV 293
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I + G + A +++ + + ++ ++ A + L
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M LG + D+ +YN LL C + A+E+ E+K +GV D+ T++T++
Sbjct: 354 VRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE---RGVTP-DLCTFTTLI 409
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL++ + +L + P+ + ++SLI+ G + +A L+++M
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN +IL+ + E Q + AF F +SK GN I K
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFG-FLDEMVSK----------GNLPNIMTYNSIIK-GY 517
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+ N + + + P T+N L+ + A + N M + P+
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDA 577
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ++I+ GN+E A ++ K M G+ PD Y + I V + K+AF L +E
Sbjct: 578 VTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Query: 609 MKHYQIQPN 617
M H P+
Sbjct: 638 MMHRGFAPD 646
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 30/311 (9%)
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG LA+E Y V +++ ++ +T + +V + + + A V +M V P
Sbjct: 135 AGWPHLAEEAYRLVLSSDSE----VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFP 190
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +T + LI+A AG V+ A+ L + M G +P N +L+ + +FD+A +F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250
Query: 457 RSWTLSKTQVALGEDYD------GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
R+ Q ++ D G R+ +E K Y +R
Sbjct: 251 RAM----DQCSVAPDVRSFNILIGGFCRVGEVEEAMK-------------FYKEMQQR-G 292
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P +++ L+ T A + EM+ +GL P+ + +T++I +G++ AL
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M G PDVV Y T + + RL A L EMK + P+L T+ TL+
Sbjct: 353 RVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGY 412
Query: 629 SRYGSLHEVQQ 639
R G+ + Q
Sbjct: 413 CRDGNFEKALQ 423
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + + + + AL+ +D P++ ++ID G+C GD K+ +++D
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID--GMCRKGDLAKANELWDD 462
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ ++ + N ++ L +++H K +E M G + ++ +YN ++K C +
Sbjct: 463 MHAREIFPNHVTYSIL--IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 338 GNTVLAQE--------------------IYGEVKHLEAKGVLKL-----------DVFTY 366
GN Q+ I+G +K G + D TY
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ I+ F++ + A +V + M ++G+ P+ T+ SLIN AG ++A L +EM+
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Query: 427 AGCEPNSQ 434
G P+ +
Sbjct: 641 RGFAPDDK 648
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 170/391 (43%), Gaps = 63/391 (16%)
Query: 245 DASKKHLS----SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++ P+ Y T+I G+CG S A + ED+ + ++ + L+
Sbjct: 151 DAARRLVADMPVEPDAYTYNTLIR--GLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILL 208
Query: 299 NVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
K +++ M G D+ +YN++L C G A E +K+L +
Sbjct: 209 EATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF---LKNLPSY 265
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + + +Y+ ++K A+ W+ A K+ E+M G PN +T++ LI+ GLVE
Sbjct: 266 GC-EPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEP 324
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
AM + E+M Q GC PNS N LL A F + ++ ++ + V+ G
Sbjct: 325 AMEVLEQMPQYGCTPNSLSYNPLLHA------FCKQKKIHKAMEFVELMVSRG------- 371
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
P +YN L+ A C + A
Sbjct: 372 ----------------------------------CYPDIVSYNTLLTALCRNGEVDVAIE 397
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+++++ G SP IS+ +ID +G + AL++L M G+ PD++ Y+T
Sbjct: 398 LLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R R+++A F +++ I+P Y +L
Sbjct: 458 REDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ V D +YN L++ C G T A + ++ + +G L DV TY+ +++
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAV---LEDMFRRGCLP-DVVTYTILLEATCKRS 215
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ A+K+ ++M G P+ +T++ ++N G VE AM + + GCEPN+ N
Sbjct: 216 GYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYN 275
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
I+L+ A +++ A +L + M HK PN V
Sbjct: 276 IVLKGLFTAERWEDAEKL-----------------------MEEMAHKG-----CPPNVV 307
Query: 498 PNSHYSSFDKR----------------FSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ SF R + P + +YN L+ A C KA+ + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G P+ +S+ L+ A +G V+ A+++L +++ G SP +++Y T I ++ +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
K+A L +EM +QP+++TY T+ R + E + QDM
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+ E + T N +N L++ K +E + M G D+ SYN LL A C
Sbjct: 328 VLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALC 387
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +A E+ ++K VL +Y+T++ A + AL++ ++M S G+
Sbjct: 388 RNGEVDVAIELLHQLKDKGCSPVL----ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQ 443
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ IT+S++ + +E+A+ F ++ G P + N +L + + A L
Sbjct: 444 PDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDL 503
Query: 456 F 456
F
Sbjct: 504 F 504
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 11/186 (5%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ M SR Y D+ S N L N ++V +E+ ++ G + SYN +
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDV-------AIELLHQLKDKGCSPVLISYNTV 417
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ AG T A E+ E + +KG L+ D+ TYSTI + A++ +
Sbjct: 418 IDGLTKAGKTKEALELLDE---MTSKG-LQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P +++++ A+ LF M+ +GC PN IL++
Sbjct: 474 DMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVK 533
Query: 451 RAFRLF 456
A LF
Sbjct: 534 EARELF 539
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 177/387 (45%), Gaps = 34/387 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + V N+Y +N L+ L+ + V +M+ G + +YN L+
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C AG A+ + V + +G K ++ T++++V A + A KV ++M+
Sbjct: 196 AFCRAGELDGAERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +++++L++ G + +++ +F EM Q G P+ L+ A +A ++A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 453 FRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KR 508
L R L +V DG + F+ ++ + + ++
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKK----------------GFLDDALLAVEEMRK 356
Query: 509 FSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+P+ YN L+ C D R L+ EM + P+ ++++ +I GN+
Sbjct: 357 CGIQPSVVCYNALINGYCKLGRMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A Q+ + M + G+ PD + Y++ I+ KRL A LFE M +QP+ TY TL
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G+ V++ L+++ +M + G
Sbjct: 475 IDGHCKEGN---VEKALSLHDEMIRKG 498
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 37/386 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTL 309
+PN T++ G+ + + +R + N N+ FNS++N A ++
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ M + G+ D+ SYN LL C G + ++ E+ +G++ DV T++++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ---RGLVP-DVVTFTSL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + A+ + M G+ N +T+++LI+ G ++ A+ EEM + G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISN 481
+P+ C N L+ + + D A L R + + + G GN D
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + P TY+ L++ C + A L M
Sbjct: 420 LNQKMLKK--------------------GVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G+ P+ ++T LID GNVE AL + M G+ PDVV Y+ I +S R
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
K+A L ++ H P+ + Y L+
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ ++ +DA A + ML GV PN T++ L+ A G +E+A+ +
Sbjct: 118 VPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFR---LFRSWTLSKTQVALGEDYDGNTDRI 479
+M AGC PN+ N L+ A A + D A R L R +K + +
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKAL 535
ME K FD+ R P +YN L+ C + A+
Sbjct: 237 GRMEGARK----------------VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM GL P+ +++T LI A +GN+E A+ ++ MRE G+ + V +T I +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
L A EEM+ IQP++V Y L+ + G +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 49/364 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ ++I G+ ++ A+ +R + + +N F +L++ L L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G+ + YN L+ C G LA+E+ ++ +EAK V K DV TYSTI+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL---IREMEAKRV-KPDVVTYSTIIS 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ + ML GV P+ IT+SSLI + A LFE MLQ G +P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + ++A L + + I D + +
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSL-------------------HDEMIRKGVLPDVVTYS 507
Query: 492 NTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYR----------VKA 534
N + S + R FK P Y+ LM C ++ +K
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 535 LMNEMRTVGLSPNHISW-------TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
LM E V S +W +ILI GNV AL K M G SP+ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 588 TAIK 591
+ ++
Sbjct: 628 SLVR 631
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V LD F++ Q + K ++P A I + + +R +++ L A ++
Sbjct: 411 VGNLDSAFQLNQKMLKKG----------VLPDA-ITYSSLIRGLCEEKRLNDACELFENM 459
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN------ 299
+ P+ + T+ID G C G+ K+ ++++++ + V ++ ++ L+N
Sbjct: 460 LQLGVQPDEFTYTTLID--GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 300 --VNAHDLKFTL----EVYKNMQKLGVM-----ADMASYNILLKACCLAGNTVLAQEIYG 348
AH L F L V N++ +M A+ S LLK C+ G A ++Y
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ KLD YS ++ + AL + ML +G +PN+ + SL+
Sbjct: 578 SMLDRN----WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Query: 409 ANAGLVEQAMHLFEEML 425
G+V +A + +++L
Sbjct: 634 FEEGMVVEADNAIQDLL 650
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G +P+ ++ ++ A ++ A + L M G++P+V Y ++ RL++A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ +M+ PN VTY TL+ A R G L ++ +++ ++ A
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA 219
>gi|255586885|ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525928|gb|EEF28334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1129
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 59/362 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ ++ID C G K+ Y LRS+NV + VFN+L+ A D F +
Sbjct: 574 PNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDV 633
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + L+KAC AG A+E+Y + KG ++ Y+
Sbjct: 634 LAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEV----YTIA 689
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + W+ A V +DM GV P+ + S+L++ +AGLV+ A +E G
Sbjct: 690 VNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGT 749
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + +A L+ ED
Sbjct: 750 QLGIVPYSSLMGACSNAKNWQKALELY-------------EDI----------------- 779
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
K KPT +T N LM A C KAL ++EM++ GL PN
Sbjct: 780 -----------------KAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPN 822
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++IL+ A +++ +L +ED ++P + Y I +C+R R K+A SL E
Sbjct: 823 IVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLR--RYKKACSLGE 880
Query: 608 EM 609
+
Sbjct: 881 SI 882
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 146/326 (44%), Gaps = 42/326 (12%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A E+ L LK D Y+T++ A +
Sbjct: 499 KLVPNPSLSTFNMLMSVCSSSQDSDGAFEVL----RLAQGAGLKADCKLYTTLISTCAKS 554
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++AGV PN T+ SLI+ CA AG + +A + + +P+
Sbjct: 555 GKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVF 614
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDR---ISNME 483
N L+ AC ++ DRAF + + + + +G G DR + NM
Sbjct: 615 NALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNML 674
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
HK ++ K T Y I + C D+ +++ ++M
Sbjct: 675 HK-----------------------YNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTR 711
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++P+ + + L+D G +G V+ A + L+ R G +V Y++ + C +K ++
Sbjct: 712 KGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQK 771
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
A L+E++K +++P + T L+ A
Sbjct: 772 ALELYEDIKAIKLKPTVSTMNALMTA 797
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 45/382 (11%)
Query: 276 RAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+A+ E R + N + FN LM+V ++ D EV + Q G+ AD Y L+
Sbjct: 489 KAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLI 548
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G E++ E+ ++ +V TY +++ A A A + S
Sbjct: 549 STCAKSGKVDAMFEVFHEM----VNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRS 604
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-----PNSQCCNILLQACVEA 446
V P+ + +++LI AC +G V++A + EM G E P+ L++AC +A
Sbjct: 605 KNVKPDRVVFNALITACGQSGAVDRAFDVLAEM---GAETHPIDPDHITVGALMKACAKA 661
Query: 447 CQFDRAFRLF------------RSWTLSKTQVALGEDYDGNTDRISNMEHK----DKQSI 490
Q DRA ++ +T++ + D++ +M K D+ +
Sbjct: 662 GQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFL 721
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTT---------YNILMKACCT--DYYRVKALMNEM 539
+ + H D F T Y+ LM AC ++ + L ++
Sbjct: 722 SALVDVA--GHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDI 779
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + L P + L+ A ++ AL+ L M+ G+ P++V Y+ + R L
Sbjct: 780 KAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDL 839
Query: 600 KQAFSLFEEMKHYQIQPNLVTY 621
L + K I P + Y
Sbjct: 840 DAGDMLLSQAKEDCITPTFLMY 861
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 242 RAYD-----ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y L N+ V+
Sbjct: 629 RAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTI 688
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N D +F VY +M + GV D + L+ AG +A E E +
Sbjct: 689 AVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEAR--- 745
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G +L + YS+++ ++AK WQ AL++ ED+ + + P T ++L+ A + +
Sbjct: 746 TQGT-QLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQL 804
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ EM G PN +ILL A
Sbjct: 805 QKALETLSEMKSFGLCPNIVTYSILLVA 832
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ R L PN ++ +L+ C S + +GA ++L++ + G+ D YTT I
Sbjct: 489 KAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLI 548
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
C +S ++ F +F EM + ++PN+ TY +L+ ++ G +
Sbjct: 549 STCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAKAGQM 592
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ +T+N+LM C + D ++ + GL + +T LI C SG V+ ++
Sbjct: 504 PSLSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEV 563
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y + I C ++ ++ +AF + ++ ++P+ V + L+ A +
Sbjct: 564 FHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQ 623
Query: 631 YGSLHEVQQCLA 642
G++ LA
Sbjct: 624 SGAVDRAFDVLA 635
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TY L+ C KA +R+ + P+ + + LI ACG SG V+ A
Sbjct: 573 EPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFD 632
Query: 570 ILKIMRED--GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+L M + + PD + +K C ++ ++ +A ++ + Y I+ Y +
Sbjct: 633 VLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNF 692
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
S+ G + +VY DM + G
Sbjct: 693 CSQTGDWEFAR---SVYDDMTRKG 713
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 27/386 (6%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDL 305
KK PN+Y ++I G + AI + + V N +N+LMNV ++
Sbjct: 360 KKKGCKPNVYTYTSLIS-----GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 306 KF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L V+ M K G + + +SYN L++ C G+T A + + KG +
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM----LKGRPTPTL 470
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ I+K + D+ +A++V E M + G P+ +++ LI+ +E A +F E
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+ G PN L+ + + D A R+ S + N + +
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR--------PNVQTYNVLI 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
H +T NF P TY+ ++ C + AL N+M
Sbjct: 583 H----GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN +++ LI A G G VE A ++ +++ G+ PD V Y I+VCV S ++ +
Sbjct: 639 HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDR 698
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
AF EM + QP L TY L++
Sbjct: 699 AFDFLGEMINAGCQPTLQTYDVLIKG 724
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/541 (21%), Positives = 211/541 (39%), Gaps = 77/541 (14%)
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV----PRADIL-FCNFVREFG 232
M +LE P +++ C NK ++ A+ Y + P+ + + + +
Sbjct: 145 MRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLN 204
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K + + Y + PN+ I ++I+ G+ + +I + + + +
Sbjct: 205 KLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTF 264
Query: 293 VFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ S++ DL E++ M + G + A+Y+ L+ C +G A + E+
Sbjct: 265 TYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
GVL V T++ + D + A K+ DM G PN T++SLI+
Sbjct: 325 TR---HGVLP-TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--- 377
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLS 462
+ A+ LF M + G PN+ N L+ +E + D A +F T S
Sbjct: 378 QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSS 437
Query: 463 KTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------ 512
++ G G+T++ ++NM T N + + S D + +
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497
Query: 513 -----PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT------------- 552
P +Y L+ C + + NEM GL PN +++T
Sbjct: 498 ANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLD 557
Query: 553 ----------------------ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+LI N GA ++ K+M E+ +SPDVV Y+T I
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + A +F +M + PNL TY +L++A + G + E ++ ++ ++ K
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE---MFSELKKQ 674
Query: 651 G 651
G
Sbjct: 675 G 675
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 152/368 (41%), Gaps = 28/368 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++ + + N + +L++ D K + + M++ G ++ +YN+L+
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N A+E+ + LE K + DV TYST++ + +AL++ M+ G
Sbjct: 586 TKQNNFSGAEELCKVM--LEEK--ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T+SSLI A G VE+A +F E+ + G P+ +++ CV + + DRAF
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHY---------- 502
+ Q L + YD + N + HK + PN S +
Sbjct: 702 FLGEMINAGCQPTL-QTYDVLIKGLQNEMVYHK----LVALPNAASTSTFDDQIINKDVI 756
Query: 503 ---SSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
SS F+ + Y+ L+ ++ L M + PN ++ + +
Sbjct: 757 SVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLIS 816
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ V+ A+ + K M + + Y I + R K+A +FE+M + +
Sbjct: 817 LLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876
Query: 618 LVTYITLL 625
+ + L+
Sbjct: 877 EIVWTILI 884
>gi|298714808|emb|CBJ25707.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1273
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 188/438 (42%), Gaps = 44/438 (10%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L CN ++ K +++S + K PN +I +CG GD ++ A E
Sbjct: 725 LACN---DWDKAEEILSMM------KSRAIKPNEVTYTELISICGRSGDVHQALAQLERA 775
Query: 283 RSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLG---VMADMASYNILLKACCLA 337
R ++ N+ +N+ ++V A ++ L + + MQ G + D+ ++N ++ AC A
Sbjct: 776 RRNGLSPNLINYNACVDVCAKTGEVDRALALLEQMQTSGDPALTPDLVTFNSVINACAKA 835
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ L ++ E+K A G LK D+ +++ + + AL + + M S G+ P+
Sbjct: 836 GDWALTLWLFSEIK---AAG-LKADIQSFNAALDACTKGSNPEAALALLKRMKSQGLEPD 891
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
I++ S I AC G A+ L +M Q G EP N++++ + A L +
Sbjct: 892 AISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLK 951
Query: 458 SWTLSKTQ-------VALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDK-- 507
S A+G G ++ ++ + + TP F NS S +
Sbjct: 952 SMKAEGIAADAYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTRFCWNSIISVHSRTG 1011
Query: 508 ------------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS-WT 552
+ S TT++ +M C D+ L+ EM GL PN +T
Sbjct: 1012 NTTAAMTLMDEMKQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYT 1071
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+ AC +G + A ++K MR+DG +PD+ +YTT C R + A L E MK
Sbjct: 1072 LLVAAC-RAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKID 1130
Query: 613 QIQPNLVTYITLLRARSR 630
I Y L A R
Sbjct: 1131 GIPATKKIYAAALAACGR 1148
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 153/380 (40%), Gaps = 64/380 (16%)
Query: 267 GICGDYMKSRAIYE-------DLRSQNVTLNIYVFNS-LMNVNAHDLKFTLEVYKNMQKL 318
GIC D ++E + RSQ ++ NI F + + + +D E+ M+
Sbjct: 684 GICMDAYAKAGLWEKALELLAEARSQGLSPNIVTFTTAVRGLACNDWDKAEEILSMMKSR 743
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + +Y L+ C +G+ + +++ G L ++ Y+ V V A
Sbjct: 744 AIKPNEVTYTELISICGRSGDV---HQALAQLERARRNG-LSPNLINYNACVDVCAKTGE 799
Query: 379 WQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + E M ++G +TP+ +T++S+INACA AG + LF E+ AG + + Q
Sbjct: 800 VDRALALLEQMQTSGDPALTPDLVTFNSVINACAKAGDWALTLWLFSEIKAAGLKADIQS 859
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L AC + + A L +
Sbjct: 860 FNAALDACTKGSNPEAALALLKRM------------------------------------ 883
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTI 553
K +P +Y + AC D L+ +M GL P + +
Sbjct: 884 -----------KSQGLEPDAISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNL 932
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I+ G G+ GAL++LK M+ +G++ D Y A+ C + + A +L EEMK
Sbjct: 933 VIETVGREGDWAGALELLKSMKAEGIAADAYTYGAAVGACAKGRNPDLARALLEEMKDLG 992
Query: 614 IQPNLVTYITLLRARSRYGS 633
+ P + +++ SR G+
Sbjct: 993 LTPTRFCWNSIISVHSRTGN 1012
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 173/443 (39%), Gaps = 74/443 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ ++I+ C GD+ + ++ ++++ + +I FN+ ++ + + L
Sbjct: 819 TPDLVTFNSVINACAKAGDWALTLWLFSEIKAAGLKADIQSFNAALDACTKGSNPEAALA 878
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTV----------------------LAQEIYG 348
+ K M+ G+ D SY + AC G+ L E G
Sbjct: 879 LLKRMKSQGLEPDAISYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVG 938
Query: 349 E----------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+K ++A+G+ D +TY V A + +A + E+M G+TP
Sbjct: 939 REGDWAGALELLKSMKAEGIAA-DAYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTR 997
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFR 457
W+S+I+ + G AM L +EM Q+ C+ + + ++ C + +D A RL
Sbjct: 998 FCWNSIISVHSRTGNTTAAMTLMDEMKQSMPCDETT--FSAMMHGCAQTRDWDAAGRLLE 1055
Query: 458 S-------------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+TL GE R++ K + P+ + S+
Sbjct: 1056 EMNAAGLKPNDACYYTLLVAACRAGEL------RLAEGLIKGMRKDGAAPDLYSYTTLSA 1109
Query: 505 FDKRF----------------SFKPTTTTYNILMKACCTDYYRVKALMNEM-RTVGLSPN 547
RF T Y + AC + ++ EM R+ G+ +
Sbjct: 1110 ACGRFHDWRMALRLIESMKIDGIPATKKIYAAALAACGRGEAEIAEILLEMMRSQGVELD 1169
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + + A G G + AL ++ +RE G P++ + AI+ C + + SL
Sbjct: 1170 DVGRSHALVAFGRGGRPDKALVLMDDIREKGPPPNLQCFNGAIEACALADDIDGGISLLA 1229
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM I PN V++ +L+ A R
Sbjct: 1230 EMGRAGIVPNGVSFRSLVSACER 1252
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 183/428 (42%), Gaps = 35/428 (8%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D + + GK L++ R + L + CG + + S +
Sbjct: 428 DAVLTALGKAKGKDEKLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALDSALSFS 487
Query: 281 DLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + + + +N+ M+ + + LE+ + + GV +Y + AC A
Sbjct: 488 E---RGIVMPVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYATAIGACAKAT 544
Query: 339 NTVLA--QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V A ++ ++ +EA G L+ + + V A ++ + A+ + M G
Sbjct: 545 TNVKANARKAVLLLEEMEAAG-LEPYPPAHQAALTVLAASEGHRAAMDLLAKMRENGTRL 603
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAG-----CEPNSQCCNILLQACVEACQFDR 451
+ ++S + + A G A+ L + M +A P+ C N + AC +A + +
Sbjct: 604 TSASYSPALKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMTACAKAGECEL 663
Query: 452 AFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R+ ++ L+ V+ G D + + K + + +
Sbjct: 664 AHRVLSRIQACGLAANLVSYGICMDAYAK--AGLWEKALELLAEA-------------RS 708
Query: 509 FSFKPTTTTYNILMKA-CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T+ ++ C D+ + + +++ M++ + PN +++T LI CG SG+V A
Sbjct: 709 QGLSPNIVTFTTAVRGLACNDWDKAEEILSMMKSRAIKPNEVTYTELISICGRSGDVHQA 768
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK---HYQIQPNLVTYITL 624
L L+ R +G+SP+++ Y + VC ++ + +A +L E+M+ + P+LVT+ ++
Sbjct: 769 LAQLERARRNGLSPNLINYNACVDVCAKTGEVDRALALLEQMQTSGDPALTPDLVTFNSV 828
Query: 625 LRARSRYG 632
+ A ++ G
Sbjct: 829 INACAKAG 836
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 57/284 (20%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGL-----VEQAMHLFEEMLQAGCEPNSQCC 436
AL++ E+ S GV P +T+++ I ACA A +A+ L EEM AG EP
Sbjct: 514 ALELLEEAKSKGVKPTEVTYATAIGACAKATTNVKANARKAVLLLEEMEAAGLEPYPPAH 573
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNTP 494
L T +A E + D ++ M + S + +P
Sbjct: 574 QAAL-----------------------TVLAASEGHRAAMDLLAKMRENGTRLTSASYSP 610
Query: 495 NFVPNSHYSSFDKRFSF--------------KPTTTTYNILMKAC-----CTDYYRVKAL 535
+ + + P +N M AC C +RV
Sbjct: 611 ALKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMTACAKAGECELAHRV--- 667
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK--VC 593
++ ++ GL+ N +S+ I +DA +G E AL++L R G+SP++V +TTA++ C
Sbjct: 668 LSRIQACGLAANLVSYGICMDAYAKAGLWEKALELLAEARSQGLSPNIVTFTTAVRGLAC 727
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ ++ S+ MK I+PN VTY L+ R G +H+
Sbjct: 728 NDWDKAEEILSM---MKSRAIKPNEVTYTELISICGRSGDVHQA 768
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 149/365 (40%), Gaps = 34/365 (9%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
+I+ G GD+ + + + ++++ + + Y + + + A + + + M+ LG
Sbjct: 933 VIETVGREGDWAGALELLKSMKAEGIAADAYTYGAAVGACAKGRNPDLARALLEEMKDLG 992
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ +N ++ GNT A + E+K + D T+S ++ A + W
Sbjct: 993 LTPTRFCWNSIISVHSRTGNTTAAMTLMDEMKQ-----SMPCDETTFSAMMHGCAQTRDW 1047
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A ++ E+M +AG+ PN + +L+ A AG + A L + M + G P+ L
Sbjct: 1048 DAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMRKDGAAPDLYSYTTL 1107
Query: 440 LQACVEACQFDRAFRLFRSWTLSKT-------QVALGEDYDGNTDRISNMEHKDKQSITN 492
AC + A RL S + AL G + I+ + + +S
Sbjct: 1108 SAACGRFHDWRMALRLIESMKIDGIPATKKIYAAALAACGRGEAE-IAEILLEMMRSQGV 1166
Query: 493 TPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
+ V SH +F + +P + LM+++R G PN +
Sbjct: 1167 ELDDVGRSHALVAFGR--GGRPD----------------KALVLMDDIREKGPPPNLQCF 1208
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
I+AC + +++G + +L M G+ P+ V++ + + C R + L E M
Sbjct: 1209 NGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRSLVSACERKDKPDLKKDLREAMSR 1268
Query: 612 YQIQP 616
++P
Sbjct: 1269 LGLKP 1273
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 7/229 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + F + + RD +A R + PN T++ G+ +
Sbjct: 1027 MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAE 1086
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +R ++Y + +L HD + L + ++M+ G+ A Y L AC
Sbjct: 1087 GLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKIDGIPATKKIYAAALAAC 1146
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G +A+ + ++ + ++GV +LD S + F AL + +D+ G
Sbjct: 1147 GR-GEAEIAEIL---LEMMRSQGV-ELDDVGRSHALVAFGRGGRPDKALVLMDDIREKGP 1201
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
PN ++ I ACA A ++ + L EM +AG PN L+ AC
Sbjct: 1202 PPNLQCFNGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRSLVSAC 1250
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 21/255 (8%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++ + W A+ + ++ AG+ P T+S +I C +G +E+A + + M+
Sbjct: 103 FERAIQALGAGRKWAEAVGLMSEVEEAGMVPGEDTYSGVIRDCCKSGRIEEATRMLDAMI 162
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-NTDRISNMEH 484
G +P N +L C R T T+V L G + D + +
Sbjct: 163 SKGYKPPQGVVNTVLDTCT-----------TRKNTRKVTKVLLAMRAQGLDVDDATYRKA 211
Query: 485 KDKQSITNTPNFVPNSHYSSFDK-RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
++ N P V K R + + +A + D+ + L+ T
Sbjct: 212 MKACAMANDPTQVVGVWELFVGKGRVVTDVAAAEVSRVARAMGSLGDWKGIIGLLGTKST 271
Query: 542 VGLSP----NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV--R 595
G + +S+ L+ A G+ + L ++ M +G D Y+ A K V R
Sbjct: 272 AGGGALPDLDRLSYNWLVSAHAQLGDAKAVLATIEDMGRNGHPADADTYSLAFKAFVKSR 331
Query: 596 SKRLKQAFSLFEEMK 610
+ A +F M+
Sbjct: 332 GRHWGAALDVFRAMQ 346
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 110/558 (19%), Positives = 177/558 (31%), Gaps = 134/558 (24%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ A +VP D + +R+ K + A R DA P + T++D C
Sbjct: 126 VEEAGMVPGEDT-YSGVIRDCCKSGRIEEATRMLDAMISKGYKPPQGVVNTVLDTCTTRK 184
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT---------------------L 309
+ K + +R+Q + ++ + M A T
Sbjct: 185 NTRKVTKVLLAMRAQGLDVDDATYRKAMKACAMANDPTQVVGVWELFVGKGRVVTDVAAA 244
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE--------IYGEVKHLEAKGVLKL 361
EV + + +G + D LL AG L + + +AK VL
Sbjct: 245 EVSRVARAMGSLGDWKGIIGLLGTKSTAGGGALPDLDRLSYNWLVSAHAQLGDAKAVLAT 304
Query: 362 -----------DVFTYSTIVKVFADAKW--WQMALKVKEDMLS--AGVTP---------- 396
D TYS K F ++ W AL V M S A TP
Sbjct: 305 IEDMGRNGHPADADTYSLAFKAFVKSRGRHWGAALDVFRAMQSSSAETTPRRVGGCVVEG 364
Query: 397 -------------------NTITWSSLINACANAG----LVEQAMHLFEEMLQAGCEPNS 433
+T W + A + A+ L EE QAG E ++
Sbjct: 365 EGVGVAEVEASAEVSSELLSTDVWCKTVTTVAQGSPPRKTLSAALSLMEEAQQAGVEVDA 424
Query: 434 QCCNILLQACVEACQFD------------RAFRLFR---SWTL------SKTQVALGEDY 472
+ +L A +A D R RL R +W + K + AL
Sbjct: 425 ATTDAVLTALGKAKGKDEKLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALD--- 481
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-------------KRFSFKPTTTTYN 519
S + ++ + + H +S K KPT TY
Sbjct: 482 -------SALSFSERGIVMPVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYA 534
Query: 520 ILMKACCTDYYRVKA-------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ AC VKA L+ EM GL P + + S A+ +L
Sbjct: 535 TAIGACAKATTNVKANARKAVLLLEEMEAAGLEPYPPAHQAALTVLAASEGHRAAMDLLA 594
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ-----PNLVTYITLLRA 627
MRE+G +Y+ A+K + + A +L + M + P++V + + A
Sbjct: 595 KMRENGTRLTSASYSPALKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMTA 654
Query: 628 RSRYGSLHEVQQCLAVYQ 645
++ G + L+ Q
Sbjct: 655 CAKAGECELAHRVLSRIQ 672
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 185/403 (45%), Gaps = 34/403 (8%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEV 311
++Y ++I C G Y ++ +++ + + + +N ++NV +
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ GV+ D +YN L+ CC G+ L +E K +++ G + D TY+ ++
Sbjct: 92 FEGMKNAGVLPDEYTYNTLI-TCCRRGS--LHEEAAAVFKDMKSMGFVP-DKVTYNALLD 147
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
V+ ++ + A++V +M G +P+ +T++SLI+A A GL+++AM L +M++ G
Sbjct: 148 VYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINL 207
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHKD 486
+ LL V A + + A R+F + + + GN + + M K
Sbjct: 208 DVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEM-MKV 266
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGL 544
+ I N+ P T+N L+ + V + EM+ G
Sbjct: 267 FEEIKNS----------------CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 310
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P ++ LI A G+ + A+ I K M E G++PD+ Y + R +Q+
Sbjct: 311 VPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEK 370
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EMK + +PN +TY +LL A Y + E+ + LA+ +++
Sbjct: 371 IFAEMKDGRCKPNELTYCSLLHA---YANGKEIGRMLALAEEI 410
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 178/379 (46%), Gaps = 25/379 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
++ ++R+ NI FN+L+ ++ + KF ++V++ ++ + D+ ++N LL
Sbjct: 231 VFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLL---A 287
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G + E+ G K ++ G + + TY+T++ ++ + A+ + + ML AG+T
Sbjct: 288 VFGQNGMDSEVSGVFKEMKRAGFVP-ERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGIT 346
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+++++ A A GL EQ+ +F EM C+PN LL A + R
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGR---- 402
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPT 514
+AL E+ + K + + + + + + + KR F P
Sbjct: 403 ---------MLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPD 453
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+T N ++ + + ++N M G +P+ ++ L+ S N E + ++LK
Sbjct: 454 LSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLK 513
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ PD ++Y T I R+ R+K+A +F EM+ + P+++TY T + + Y
Sbjct: 514 EILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFV---ASYA 570
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ + + V + M K G
Sbjct: 571 ADSMFEDAIDVVRYMIKHG 589
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 193/441 (43%), Gaps = 56/441 (12%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L FVR GK SA+R + + PN+ +I + G G + + ++E++
Sbjct: 215 LLSGFVRA-GKDE---SAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Query: 283 RSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +I +N+L+ V N D + + V+K M++ G + + +YN L+ A G+
Sbjct: 271 KNSCCVPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERDTYNTLISAYSRCGS 329
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +IY + LEA + D+ TY+ ++ A W+ + K+ +M PN +
Sbjct: 330 FDQAMDIYK--RMLEAG--ITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNEL 385
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS----------QCCNILLQACVEACQF 449
T+ SL++A AN + + + L EE+ EP++ C++L++A V +
Sbjct: 386 TYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLEL 445
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
R G D +T + +Q T T + +F
Sbjct: 446 KRK----------------GFSPDLSTLNAMLSIYGRRQMFTKTNEIL------NFMNES 483
Query: 510 SFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P+ TYN L M + ++ R + ++ E+ G+ P+ IS+ +I A +G ++ A
Sbjct: 484 GFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEA 543
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I MRE G+ PDV+ Y T + + A + M + +PN TY +++
Sbjct: 544 SRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDG 603
Query: 628 RSRY----------GSLHEVQ 638
++ SLHE+
Sbjct: 604 YCKHNHRDDAIMFISSLHELD 624
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 18/299 (6%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K LDV+ Y++++ ++ A+ V + M G P IT++ ++N G+
Sbjct: 26 KDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 85
Query: 416 QAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+ LFE M AG P+ N L+ C + A +F+ S V Y+
Sbjct: 86 NKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK-SMGFVPDKVTYNA 144
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D + + K+++ N P+ TYN L+ A D +A
Sbjct: 145 LLD-VYGKSRRTKEAMEVLREMEVN----------GCSPSIVTYNSLISAYARDGLLKEA 193
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L N+M G++ + ++T L+ +G E A+++ MR G P++ + IK+
Sbjct: 194 MELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKM 253
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + +FEE+K+ P++VT+ TLL + G EV V+++M +AG
Sbjct: 254 HGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRAG 309
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ +C+ + + +++ L + + P+ + +T++ V C +++ +
Sbjct: 384 ELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFL 443
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAG 338
+L+ + + ++ N+++++ FT E+ M + G +A+YN L+ +
Sbjct: 444 ELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSE 503
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N ++E+ +K + AKG+ K D +Y+T++ + + A ++ +M +G+ P+
Sbjct: 504 NFERSEEV---LKEILAKGI-KPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDV 559
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++ + + A + E A+ + M++ GC+PN N ++ + D A S
Sbjct: 560 ITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISS 619
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L+N++ G + ++T LI AC +G A+ + K M E+G P ++ Y + V
Sbjct: 19 SLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVY 78
Query: 594 VR-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + LFE MK+ + P+ TY TL+ R GSLHE + AV++DM G
Sbjct: 79 GKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITC-CRRGSLHE--EAAAVFKDMKSMG 134
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G G V A +L + +DG DV AYT+ I CV + R ++A +F++M+
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 613 QIQPNLVTYITLLRARSRYG 632
+P L+TY +L + G
Sbjct: 63 GCKPTLITYNVILNVYGKMG 82
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 32/419 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK +L AL+ + K SP++Y +I G C GD K + E+++ N+ +
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIH--GFCKQGDVEKGLYLIEEMKYSNMEPS 394
Query: 291 IYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++SL H L +L++++++ G D +Y+IL+K C+ G+ A
Sbjct: 395 LVSYSSLF----HGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E+ + L D + ++V F W AL+ ML G+ P+ T + +
Sbjct: 451 KLMEEM----VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G VE+A++L EM G PN N ++ + + +RA LF L +
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELF-PLMLKRN 565
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
+ Y D + + K + Y+ K P Y IL+
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALML----------YARMLK-IGVTPDMVAYTILINI 614
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A L +M G++P+ IS+T +I G++ A + M + G P
Sbjct: 615 LCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPT 674
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
VV YT+ + + R+ A L +EMK I P++VTY L+ A R G+L + + L
Sbjct: 675 VVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 187/451 (41%), Gaps = 89/451 (19%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH--------DLKFTLEVYKNMQKLGVMADMASY 327
R+++E+++S N++ + +MN D + E+ + M++ G + +Y
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + C G A + + + A G++ +V+ Y+ I+ ALKV E
Sbjct: 294 STYIYGLCRVGYVESALDFVRSL--ISANGLV--NVYCYNAIIHGLCKKGELDEALKVLE 349
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M S G++P+ T+S LI+ G VE+ ++L EEM + EP+ + L +
Sbjct: 350 EMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKR 409
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI----------SNMEHKDKQSITNTPNFV 497
D + +FR A G YD I + HK + + N
Sbjct: 410 LSDISLDIFRDLG------AAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN-NLA 462
Query: 498 PN-SHYSSFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--L 535
P+ S++ S F P+ T N+++ A C + +A L
Sbjct: 463 PDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNL 522
Query: 536 MNEMRTVGLSPNHIS-----------------------------------WTILIDACGG 560
MNEM+T G+ PN + ++ LID
Sbjct: 523 MNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAK 582
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
N + AL + M + G++PD+VAYT I + R+ +A++LF++M + P+ ++
Sbjct: 583 QSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKIS 642
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y +++ R G ++++ A++ +M + G
Sbjct: 643 YTSVIAGFCRIG---DMRKAWALFNEMLQRG 670
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 63/430 (14%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL--------------------RSQNV 287
KK+ S ++ RT+++V + G +M+ A+ D+ ++
Sbjct: 116 KKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDA 175
Query: 288 TLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ VF+ L+ V A + L+ ++V+ +K G+ S N LLK A +
Sbjct: 176 ARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRS 235
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ------MALKVKEDMLSAGVTPNTI 399
++ E+K +VFTY+ ++ + + + A ++ E+M G +P +
Sbjct: 236 LFEEMKSTGPPP----NVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVV 291
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
T+S+ I G VE A+ ++ A N C N ++ + + D A ++
Sbjct: 292 TYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM 351
Query: 457 RSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQSITNT-PNFVPNSHYSSF-----DK 507
+S +S T L + D + ++ +N P+ V YSS K
Sbjct: 352 KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS---YSSLFHGLCKK 408
Query: 508 RFS--------------FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
R S +K T Y+IL+K C D LM EM L+P+ ++
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+ G AL+ +M E G+ P + I R R+++A +L EM+
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528
Query: 612 YQIQPNLVTY 621
I PNL TY
Sbjct: 529 QGIFPNLFTY 538
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 48/185 (25%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID-ACGGSG 562
K+ + +T + N L+K C + R +++L EM++ G PN ++TI+++ C G+
Sbjct: 206 KKTGLELSTRSCNFLLK-CLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNF 264
Query: 563 -----NVEGALQILKIMREDGMSPDVVAYTTAI-KVC-----------VRS--------- 596
+ A +IL+ M +G SP VV Y+T I +C VRS
Sbjct: 265 GEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVN 324
Query: 597 --------------KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
L +A + EEMK I P++ TY L+ + G +V++ L
Sbjct: 325 VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG---DVEKGLY 381
Query: 643 VYQDM 647
+ ++M
Sbjct: 382 LIEEM 386
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 391 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 494
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 495 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSG 684
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 157/389 (40%), Gaps = 62/389 (15%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R + I PR + ++ + K L A +K SP+ + +ID G
Sbjct: 330 LRQSGIKPRTRA-YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
+ +R + +++ + +V N +VF+ L+ + + + T +V K M+ +GV D YN
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 329 I-----------------------------------LLKACCLAGNTVLAQEIYGEVKHL 353
+ L+ C G ++A+E++ + +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAM 505
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E +G L TY+ ++ + D + W ++ M S G+ PN +T ++L++ +G
Sbjct: 506 ERRGCLPCAT-TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGE 470
A+ EEM G +P+S N L+ A + + Q AFR+ S L + +AL
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
+ + + +D ++ + K KP TY LMKA
Sbjct: 625 LINAFGE-----DRRDAEAFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ +V + EM G P+ + ++L A
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 286 SKALQLLGMAQ 296
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 242 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 301
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 302 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 361
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 362 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 417
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 418 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 465
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 466 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 490
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 491 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 550
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 551 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 610
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G
Sbjct: 611 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSG 655
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 378 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 437
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 438 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 493
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 494 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 553
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 554 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 608
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 609 AFAVL----------QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 658
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 659 DRKARSMLRSA 669
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 219 RADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D F N V + FGK L A+ +D P+ T+ID G ++ +
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE- 470
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E+++ M++ G + +YNI++
Sbjct: 471 --------------------------------EMFEAMERRGCLPCATTYNIMI------ 492
Query: 338 GNTVLAQEIYGEVKHL----EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
N+ QE + ++K L +++G+L +V T++T+V V+ + + A++ E+M S G
Sbjct: 493 -NSYGDQERWDDMKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 550
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P++ +++LINA A GL EQA++ F M G +P+ N L+ A E + AF
Sbjct: 551 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 610
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 141 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 196
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 197 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 256
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 257 SKALQLLGMAQ 267
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 56/392 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVY 312
+Y II+ G G + S + ++ + V+ +I +N+++N A D + L ++
Sbjct: 169 VYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLF 228
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ G+ D+ +YN LL AC G L E + + G++ D+ TYS +V+
Sbjct: 229 AEMRHEGIQPDVITYNTLLGACAHRG---LGDEAEMVFRTMNESGIVP-DINTYSYLVQT 284
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + ++ +M G P+ +++ L+ A A G +++AM +F +M AGC N
Sbjct: 285 FGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ ++LL + ++D LF +S NTD
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEMKVS------------NTD--------------- 377
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHIS 550
P TYNIL++ Y V L ++M + PN +
Sbjct: 378 --------------------PDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQT 417
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI ACG G E A +IL M E G+ P AYT I+ ++ ++A +F M
Sbjct: 418 YEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMN 477
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P + TY +L+ A +R G E + L+
Sbjct: 478 EVGSNPTVETYNSLIHAFARGGLYKEAEAILS 509
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 183/432 (42%), Gaps = 59/432 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + +G+ ++L + K+ SP++ T+I+ C G D+ ++ ++
Sbjct: 172 YTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM 231
Query: 283 RSQNVTLNIYVFNSLMNVNAH-DLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + + ++ +N+L+ AH L E V++ M + G++ D+ +Y+ L++ G
Sbjct: 232 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTF---GKL 288
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+++ ++ +E G L D+ +Y+ +++ +A+ + A+ V M +AG N T
Sbjct: 289 NRLEKVSELLREMECGGNLP-DITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAAT 347
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S L+N G + LF EM + +P++ NIL+Q E F LF
Sbjct: 348 YSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHD-- 405
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ E+ + +P TY
Sbjct: 406 -------MAEE--------------------------------------NVEPNMQTYEG 420
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ AC Y K ++ M G+ P+ ++T +I+A G + E AL + M E G
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+P V Y + I R K+A ++ M ++ ++ ++ ++ A + G + +
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGG---QYE 537
Query: 639 QCLAVYQDMWKA 650
+ + Y +M KA
Sbjct: 538 EAVKSYVEMEKA 549
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 116/296 (39%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN + +I GL+++
Sbjct: 95 KLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCR 154
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G ++ A QF + L +R
Sbjct: 155 EVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGM---------------KQER 199
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+S P+ TYN ++ AC D+ + L
Sbjct: 200 VS--------------------------------PSILTYNTVINACARGGLDWEGLLGL 227
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ I++ L+ AC G + A + + M E G+ PD+ Y+ ++ +
Sbjct: 228 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 287
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL++ L EM+ P++ +Y LL A Y L +++ + V++ M AG
Sbjct: 288 LNRLEKVSELLREMECGGNLPDITSYNVLLEA---YAELGSIKEAMGVFRQMQAAG 340
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 25/300 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM +I CG G Y ++ I + + V + + ++ + L +
Sbjct: 413 PNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVM 472
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + +YN L+ A G L +E + + G LK DV +++ +++
Sbjct: 473 FNTMNEVGSNPTVETYNSLIHAFARGG---LYKEAEAILSRMNESG-LKRDVHSFNGVIE 528
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F ++ A+K +M A PN +T ++++ +AGLV++ F+E+ +G P
Sbjct: 529 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILP 588
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ C ++L + + + A+ L + +S +G+ G+ D SN +
Sbjct: 589 SVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQ----- 643
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSP 546
I NS RF YN L++A C R ++NE GL P
Sbjct: 644 -IVEYVFDKLNSEGCGLGMRF--------YNALLEALWCMFQRERAARVLNEASKRGLFP 694
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 48/257 (18%)
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M S GV +++++INA G ++ L M Q P+ N ++ AC
Sbjct: 155 EVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINAC 214
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
G D++G + M H+ Q
Sbjct: 215 ARG----------------------GLDWEGLLGLFAEMRHEGIQ--------------- 237
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGS 561
P TYN L+ AC +A M M G+ P+ +++ L+ G
Sbjct: 238 ---------PDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKL 288
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E ++L+ M G PD+ +Y ++ +K+A +F +M+ N TY
Sbjct: 289 NRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATY 348
Query: 622 ITLLRARSRYGSLHEVQ 638
LL ++G +V+
Sbjct: 349 SVLLNLYGKHGRYDDVR 365
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 28/425 (6%)
Query: 231 FGKKRDLVSALRAYD---ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
F KK DL ALRA+D K + S + + II + G G + ++ L+
Sbjct: 147 FHKKFDL--ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 288 TLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+L++Y + SL++ A+ ++ + V+K M++ G + +YN++L G +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP--WNK 262
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I V+ +++ G+ D +TY+T++ Q A +V E+M +AG + + +T+++L+
Sbjct: 263 ITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ + ++AM + EM+ G P+ N L+ A D A L T+
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK 523
D T +S E K S S F+ + KP T+N +K
Sbjct: 382 ----PDVFTYTTLLSGFERAGKVE----------SAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ + + +E+ GLSP+ ++W L+ G +G + K M+ G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + T I R +QA +++ M + P+L TY T+L A +R G + ++ L
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 642 AVYQD 646
A +D
Sbjct: 548 AEMED 552
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 190/406 (46%), Gaps = 27/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + +I+E++R+ NI FN+ + + + KFT +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EM++ I P+++TY T + + Y + ++ + V + M K G
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHG 764
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 167/409 (40%), Gaps = 56/409 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + F A+ + ++ P + I++V G G + K ++ E +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + Y +N+L+ + +V++ M+ G D +YN LL + G +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD---VYGKS 327
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E + + G + TY++++ +A A+++K M G P+ T
Sbjct: 328 HRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG VE AM +FEEM AGC+PN C F+ +++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPN-------------ICTFNAFIKMY---- 429
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GN + + M I + N P T+N
Sbjct: 430 -------------GNRGKFTEM-----MKIFDEINVC------------GLSPDIVTWNT 459
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ G P ++ LI A G+ E A+ + + M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 36/414 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + F + + SA+ ++ + PN+ I + G G + + I++++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 284 SQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A G+
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +Y + + GV D+ TY+T++ A W+ + KV +M PN +T
Sbjct: 506 EQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC-------QFDRAF 453
+ SL++A AN + L EE+ EP + +LL+ V C + +RAF
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLPEAERAF 617
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S L S + ++ + N V + + K F P
Sbjct: 618 SELKERGFSPDITTLN----------SMVSIYGRRQMVAKANGVLD-----YMKERGFTP 662
Query: 514 TTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + + A +I
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
MR G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P + +T++ VC C ++ + +L+ + + +I NS++++ V
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G MA+YN L+ + + ++EI ++ + AKG+ K D+ +Y+T++
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI---LREILAKGI-KPDIISYNTVIY 707
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A ++ +M ++G+ P+ IT+++ I + A + E+A+ + M++ GC P
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N N ++ + + D A +LF
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEA-KLF 791
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E+++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRN---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 108/484 (22%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +RA +E++R++ + N +VF SL++ A D++ L + M+ G+ + +Y
Sbjct: 311 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTY 370
Query: 328 NILLKACC------LAGNTVLAQEIYGEVKHLEAKGV----------------------- 358
+IL+ +GN A+E+ V+ +E G+
Sbjct: 371 SILISGFAKINDSHQSGNMERAEEL---VREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 427
Query: 359 -----------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K + +Y ++ ++ AL + ++M S G+ N T+S LIN
Sbjct: 428 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLING 487
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-- 465
+ A +FEEML++G +P+ N+L++A + DRA + + Q
Sbjct: 488 FIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS 547
Query: 466 ----------VALGEDYDGNTDRISNM---------------------EHKDKQSIT--- 491
A+ D D + M +HK +++++
Sbjct: 548 NRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLD 607
Query: 492 --NTPNFVPNSH--------------------YSSFDKRFSFKPTTTTYNILMKACCTDY 529
+ PN H Y + K K Y L++ACC
Sbjct: 608 KMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSG 667
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
AL EM + N + ILID G+V A ++K M+EDG+ P++ YT
Sbjct: 668 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 727
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I C ++ +++A + EEM ++PN+ TY TL++ +R +C +++M
Sbjct: 728 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC---FEEM 784
Query: 648 WKAG 651
AG
Sbjct: 785 KLAG 788
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 28/364 (7%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 457 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 516
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 517 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 572
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 573 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 632
Query: 448 QFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYS 503
+AF F S K V + E + M+ ++T +F +P +
Sbjct: 633 DIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ--SALAVTREMSFQKIPRN--- 687
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
T YNIL+ D + + LM +M+ G+ PN ++T I+AC +
Sbjct: 688 -----------TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKA 736
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+++ A ++++ M + G+ P+V YTT IK R +A FEEMK ++P+ +Y
Sbjct: 737 GDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 796
Query: 622 ITLL 625
L+
Sbjct: 797 HCLV 800
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 519 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 578
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 579 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 638
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 639 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 694
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 695 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 754
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 755 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 787
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 615 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 674
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 675 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGVPP-NIHTYTSYI 730
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 731 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 790
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 791 PDEASYHCLVTS 802
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 625 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 684
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 685 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 744
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 745 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 800
Query: 406 NA 407
+
Sbjct: 801 TS 802
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 187/432 (43%), Gaps = 59/432 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + + + AL+ + K+ P + I++V G G + K A+ +D+
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 283 RSQNVTLNIYVFNSLMNV-NAHDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + ++ +N+L++ A L + L++++ ++ G D +YN LL + G +
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLD---VYGKS 298
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E +K +E+ + V TY+++V + + AL +K M+ G+ P+ T
Sbjct: 299 RRPKEAMEVLKQMESNS-FRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYT 357
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ NAG E AM +FEEM + GC+PN N L++ + +F+ ++F+
Sbjct: 358 YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K P T+N
Sbjct: 418 VCKCS-----------------------------------------------PDIVTWNT 430
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ +P ++ LI A G G+ + A+ K M E G
Sbjct: 431 LLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+SPD+ Y + R +Q+ + EMK +PN VTY +LL A Y + EV+
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHA---YANGREVE 547
Query: 639 QCLAVYQDMWKA 650
+ A+ ++++
Sbjct: 548 RMNALAEEIYSG 559
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 178/404 (44%), Gaps = 27/404 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++Y T++ G + ++E++R NI FN+L+ + KF ++V
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKV 412
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K ++ D+ ++N LL + G + E+ G + ++ + + T++T++
Sbjct: 413 FKEIKVCKCSPDIVTWNTLL---AVFGQNGMDSEVSGVFEEMK-RSRFAPERDTFNTLIS 468
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+ + ML AGV+P+ T+++++ A GL EQ+ + EM GC+P
Sbjct: 469 AYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N + LL A + +R AL E+ T + + K +
Sbjct: 529 NEVTYSSLLHAYANGREVER-------------MNALAEEIYSGTIKTHAVLLKTLVLVN 575
Query: 492 NTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + + + + F KR P TT N ++ KA ++N M GL+ +
Sbjct: 576 SKVDLLVETERAFLEFRKR-GISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLS 634
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ L+ + N + QI + + + G+ PDV++Y I R+ + +A + E
Sbjct: 635 LTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIE 694
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EMK P++VTY T + A Y + + + V + M K G
Sbjct: 695 EMKVPAPVPDVVTYNTFIAA---YAADSMFVEAIDVIRYMIKQG 735
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
LV RA+ +K SP++ ++ + G K+ I + +TL++ +NS
Sbjct: 581 LVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNS 640
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
LM + + F + ++++ + G+ D+ SYNI++ A C A+ I E+K
Sbjct: 641 LMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPA 700
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
DV TY+T + +A + A+ V M+ G PN T++S+++ L
Sbjct: 701 PVP----DVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLR 756
Query: 415 EQA 417
++A
Sbjct: 757 DEA 759
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++ G +G V A +L + DG DV YT+ I +K+ + A +F +MK
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L+TY +L + G + +A+ QDM
Sbjct: 209 GCEPTLITYNAILNVYGKMG--MPWAKIIALVQDM 241
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 178/409 (43%), Gaps = 52/409 (12%)
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ PN+ T+++ G+C G +++ A+ + + + N + ++++ D
Sbjct: 75 QMCKPNVVTFTTLMN--GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 306 KFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + + M++L + D+ Y+ ++ G AQ ++ E ++ KG+ D+
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE---MQDKGIFP-DIV 188
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TYS ++ F + W A ++ ++ML ++P+ +T+S LINA G + A L +EM
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G PN CN LL ++ + A +F++ S + ++G
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---------- 298
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+P TYNIL+ + + + L EM
Sbjct: 299 --------------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++++ +I+ ++ A Q+ M SP++V + T I ++ +
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF EM I N +TYITL+R + G+ + L ++Q+M +G
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGN---INGSLDIFQEMISSG 438
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 145/359 (40%), Gaps = 45/359 (12%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
L + D+ S+NIL+K C A +G++ L L T++T++
Sbjct: 9 LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTL----VTFNTLLHGLCVED 64
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL D+ PN +T+++L+N G V +A+ L + M++ G +PN
Sbjct: 65 RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 438 ILLQACVEACQFDRAFRLFRSW-TLS--KTQVAL------GEDYDGNTDRISNM--EHKD 486
++ + A L R LS K V + G DG N+ E +D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 487 KQSITN-------TPNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCT--DYYR 531
K + F + +S + P T++ L+ A D
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMS 580
+ L+ EM + G+ PN ++ L+D SG ++ AL++ K M++ +G+
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV Y I + + +A L+EEM H I P+ VTY +++ + L E Q
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 52/265 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++ +I+ GD ++ + +++ S V N+ N+L++ ++ LK LE
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 311 VYKNMQKL-----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
++K MQK GV D+ +YNIL+ G + A+E+Y E+ H +G++
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIV 335
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D TYS+++ A ++ + M S +PN +T+++LI AG+V+ +
Sbjct: 336 P-DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 420 LF-----------------------------------EEMLQAGCEPNSQCCNILLQACV 444
LF +EM+ +G P++ +L
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Query: 445 EACQFDRAFRLFRSWTLSKTQVALG 469
+ RA + +S +G
Sbjct: 455 SKEELKRALAMLEELQMSMDHHLVG 479
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 189/428 (44%), Gaps = 60/428 (14%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKS 275
+ DIL ++ R A RA + ++ LS S N + +ID G +K
Sbjct: 41 QGDILLYGYL--INALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKG 98
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + N+ V++SL+N L+ + ++ M G+ A++ +YN L+ A
Sbjct: 99 LKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHA 158
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G L +E + +G+L DV T++T++ + Q A K+ E M+ G
Sbjct: 159 SCRFG---LWKEATRTFSQMVGEGILP-DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T++SL+N ++ A+ LFE M++ G + + N L+ + + + A
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LFR M++++ P
Sbjct: 275 TLFRK-----------------------MQYEE------------------------LTP 287
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TTY IL+KA + K L N M+ G SP+ ++T+L+D +G +E A+ +
Sbjct: 288 SITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVF 347
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++ P + Y+ I +++R + A +F+E+ + PN+VTY ++ +
Sbjct: 348 RSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKE 407
Query: 632 GSLHEVQQ 639
G L E ++
Sbjct: 408 GKLLEAER 415
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 147/336 (43%), Gaps = 30/336 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ M + G D+ Y L+ A A E++ + G + FTY
Sbjct: 29 LELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSG----NFFTYGL 84
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ LK+ +M++ G+ PN I +SSLIN G + +A++LF+EM+ G
Sbjct: 85 VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE----DYDGNTDRISNMEH 484
+ N N L+ A +C+F L++ T + +Q+ +GE D T I ++
Sbjct: 145 IKANVITYNSLIHA---SCRFG----LWKEATRTFSQM-VGEGILPDVVTFTTLIDHLSK 196
Query: 485 KDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K K Y F+ + P TYN L+ C + A L M
Sbjct: 197 KGK----------VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ + IS+ LI+ SG E A+ + + M+ + ++P + YT +K ++ R++
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A LF M+ P+L TY LL + G + E
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P + F + KK + A + ++ K +PN+ ++++ G+C +
Sbjct: 180 ILPDV-VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN--GLCLHHQMD 236
Query: 276 RAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
A+ +E + + + +++ +N+L+N + + + +++ MQ + + +Y ILL
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296
Query: 332 KACCLAGNTVLAQEIY------GEVKHLEAKGVL------------KLDVF--------- 364
KA G A+E++ G+ L+ VL +DVF
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356
Query: 365 ----TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
YS ++ A+ W+ A+++ +++ + G+ PN +T++ +IN G + +A L
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
F +M ++GCE + N +++ ++ Q +A +
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLK 453
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 52/264 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ +G PN +T S+L+ G V A+ LF++M ++G + + L+ A + Q
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
RA L R L E GN
Sbjct: 61 RRAVELHRRM--------LSEICSGNF--------------------------------- 79
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
TY +++ + C D +K L EM +G+ PN I ++ LI+ G + A
Sbjct: 80 ------FTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREA 133
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + M G+ +V+ Y + I R K+A F +M I P++VT+ TL+
Sbjct: 134 VNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDH 193
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
S+ G +VQ+ +++ M K G
Sbjct: 194 LSKKG---KVQEAYKIFELMIKQG 214
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 178/409 (43%), Gaps = 52/409 (12%)
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ PN+ T+++ G+C G +++ A+ + + + N + ++++ D
Sbjct: 75 QMCKPNVVTFTTLMN--GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 306 KFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + + M++L + D+ Y+ ++ G AQ ++ E ++ KG+ D+
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE---MQDKGIFP-DIV 188
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TYS ++ F + W A ++ ++ML ++P+ +T+S LINA G + A L +EM
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G PN CN LL ++ + A +F++ S + ++G
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG---------- 298
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
+P TYNIL+ + + + L EM
Sbjct: 299 --------------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++++ +I+ ++ A Q+ M SP++V + T I ++ +
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF EM I N +TYITL+R + G+ + L ++Q+M +G
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGN---INGSLDIFQEMISSG 438
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 145/359 (40%), Gaps = 45/359 (12%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
L + D+ S+NIL+K C A +G++ L L T++T++
Sbjct: 9 LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTL----VTFNTLLHGLCVED 64
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL D+ PN +T+++L+N G V +A+ L + M++ G +PN
Sbjct: 65 RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 438 ILLQACVEACQFDRAFRLFRSW-TLS--KTQVAL------GEDYDGNTDRISNM--EHKD 486
++ + A L R LS K V + G DG N+ E +D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 487 KQSITN-------TPNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCT--DYYR 531
K + F + +S + P T++ L+ A D
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-----------DGMS 580
+ L+ EM + G+ PN ++ L+D SG ++ AL++ K M++ +G+
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV Y I + + +A L+EEM H I P+ VTY +++ + L E Q
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 43/380 (11%)
Query: 286 NVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
NV L++Y F ++ V D F EV M+++G+ ++ Y L+ CC G+
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGF--EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++++ ++ L+ + +TY+ ++ F + +++ E M G+ PN T+
Sbjct: 204 RGKQLFYKMGELDVVA----NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
+S+I C N G + A LF+EM + G N N L+ + + A RL +
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 459 WTLSKTQVALGEDYDG-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LS ++ DG N D+ S++ ++ K S P
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS--------------------GQSP 359
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYNIL+ + V ++ EM GLSP+ +++TIL+DA S N+E A QI
Sbjct: 360 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 419
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + G+ D+ Y I +K+A LF+ + ++PN V Y T++ +
Sbjct: 420 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 479
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
GS + + L + ++M + G
Sbjct: 480 GSSY---RALRLLKEMGENG 496
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 176/383 (45%), Gaps = 26/383 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + T+ID C GD + + ++ + +V N Y + L+N K +E
Sbjct: 183 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 242
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ G++ ++ +YN ++ CC G A E++ E++ +GV +V TY+T++
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE---RGV-ACNVVTYNTLI 298
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ M G++PN I++++LI+ + G +++A LF +M +G
Sbjct: 299 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ NIL+ EA R + LS ++V D R N+E +
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV-RSDNIEKAFQ 417
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
YSS +K Y +L+ C D L + + L
Sbjct: 418 I-------------YSSMEKA-GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 463
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++LK M E+GM P+V +Y + I + + ++ +A L
Sbjct: 464 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVL 523
Query: 606 FEEMKHYQIQPNLVTYITLLRAR 628
++M ++P++ + + +AR
Sbjct: 524 LKDMIELGLKPSISIWNMISKAR 546
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 21/302 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG +KLDV+++ ++K + + +V M G++PN + +++LI+ C G
Sbjct: 142 ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 201
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+ LF +M + N +L+ F L K + L E
Sbjct: 202 IERGKQLFYKMGELDVVANQYTYTVLING-------------FFKMGLKKDGIELYEKMK 248
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
T + N+ + + N+ + FD + TYN L+ C +
Sbjct: 249 -LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 307
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++A LM M+ GLSPN IS+ LID GN++ A + M+ G SP + Y
Sbjct: 308 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 367
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I +K + EM+ + P+ VTY L+ A R + +++ +Y M K
Sbjct: 368 IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN---IEKAFQIYSSMEK 424
Query: 650 AG 651
AG
Sbjct: 425 AG 426
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 110/249 (44%), Gaps = 45/249 (18%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R ++ A R K+ SPN+ T+ID G C G+ K+ +++ ++S + +
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLID--GYCSIGNLDKASSLFNQMKSSGQSPS 360
Query: 291 IYVFNSLMN-------------------------------------VNAHDLKFTLEVYK 313
+ +N L+ V + +++ ++Y
Sbjct: 361 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 420
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K G++AD+ Y +L+ C+ G+ A +++ + + LK + Y+T++ +
Sbjct: 421 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH----LKPNDVIYNTMIYGY 476
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL++ ++M G+ PN +++S I +A L ++M++ G +P+
Sbjct: 477 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSI 536
Query: 434 QCCNILLQA 442
N++ +A
Sbjct: 537 SIWNMISKA 545
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 197/466 (42%), Gaps = 33/466 (7%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 109 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 168
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 228
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 284
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M+ G TP+ ++++I+ G +E A + M G +PN C N LL+
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFV 497
A +++ L + L + D+ +G DR+ + + +
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVIT 404
Query: 498 PNSHYSSFDKR---------------FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
+ + F K KP T +Y I++K C+ V A LM++M
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 570
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 161/397 (40%), Gaps = 30/397 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ L+ E+
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 319
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 375
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 376 FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
N+ I+L+ A ++ A L + L+ ++ +
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495
Query: 487 KQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
KQ + N +P+ + YS T + L KA TD L+N M G+
Sbjct: 496 KQMLVNGCSPDLI---SYS------------TVIDGLGKAGKTD--EALELLNVMVNKGM 538
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN I ++ + A G + +Q+ +++ + D V Y I + ++A
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M PN TY L+R + G + E Q+ L
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 200
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 201 ----AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + L+ A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ M Y ++PN+V Y TLL+ E ++ LA
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 240/555 (43%), Gaps = 99/555 (17%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + I+ V+G+LK++ LG+ P + + +G +++L
Sbjct: 224 SLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 283
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 284 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFAKMKTGRHKPD---RVT 332
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 333 YITLLDR-----------FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 381
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ A + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 382 GEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVF 441
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 442 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 498
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ CEP+ N L+ +A +
Sbjct: 499 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 557 DEAWKMFMRM-----------------------------------------------KEM 569
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 570 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 630 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 688
Query: 628 RSRYGSLHEVQQCLA 642
+ G + + + +A
Sbjct: 689 VVKAGLIEDAYKIIA 703
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 170/385 (44%), Gaps = 35/385 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 246 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 306 CTARKLDCAKEVFAKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
+F + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 481
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 482 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 523
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+ PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 524 AIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 583
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G ++Q+ + +++ M + G
Sbjct: 584 GLGKNG---KIQEAIELFEGMVQKG 605
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 151/347 (43%), Gaps = 41/347 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH A G L + TY+ ++
Sbjct: 738 SERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGL 797
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + + G P+ T++ L++A +G +++ +++EM CEPN+
Sbjct: 798 LEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNT 857
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 858 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 915
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
+ + +P YNIL+ KA D AL M G+
Sbjct: 916 FEGMSD-------------YGCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 960
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L + ++E G++PDVV Y I + RL++A L
Sbjct: 961 PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVL 1020
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EMK + I P+L TY +L+ G + E + +Y ++ +AG
Sbjct: 1021 FNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAG 1064
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 165/390 (42%), Gaps = 73/390 (18%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 770 ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLL 829
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G EIY E+ E + + T++ ++ A AL + D++S
Sbjct: 830 DAYGKSGKIDELFEIYKEMSAHECEP----NTITHNIVISGLVKAGNVDDALDLYYDLMS 885
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE M GC PN NIL+ +A + D
Sbjct: 886 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD 945
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 946 AACALFKRMV--------------------------KEGV-------------------- 959
Query: 511 FKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+P TY++L+ C Y+R E++ GL+P+ + + ++I+ G
Sbjct: 960 -RPDLKTYSVLVDCLCMVGRVDEGLHYFR------ELKESGLNPDVVCYNLIINGLGKFH 1012
Query: 563 NVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E AL + M++ G++PD+ Y + I + +++A ++ E++ ++PN+ T+
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+R S G + + AVYQ M G
Sbjct: 1073 NALIRGYSLSG---KPEHAYAVYQTMVTGG 1099
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P+ TY+ LM D V L+ EM T+GL PN ++TI I G +G + A
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ILK M ++G PDVV YT I +++L A +F +MK + +P+ VTYITLL
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
S L V Q + +M K G
Sbjct: 340 FSDNRDLDSVNQ---FWSEMEKDG 360
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/490 (20%), Positives = 190/490 (38%), Gaps = 79/490 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS-- 284
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 500
Query: 285 ---QNVTLN------------------------------IYVFNSLMNV--NAHDLKFTL 309
+VT N + V NSL+N A +
Sbjct: 501 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAW 560
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+++ + + +YN LL G A E++ + + KG + T++T+
Sbjct: 561 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF---EGMVQKGCPP-NTITFNTL 616
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ALK+ M+ G P+ T++++I G V++AM F +M +
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 675
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------------------------------ 459
P+ LL V+A + A+++ ++
Sbjct: 676 YPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAV 735
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S+ VA G DG++ + + + K + + + + F K +P TYN
Sbjct: 736 SFSERLVANGICRDGDSILVPIIRYSFKHNNASGARML----FEKFTKDLGVQPKLPTYN 791
Query: 520 ILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ D + + + +++ G P+ ++ L+DA G SG ++ +I K M
Sbjct: 792 LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
P+ + + I V++ + A L+ + M P TY L+ S+ G L+E
Sbjct: 852 ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911
Query: 637 VQQCLAVYQD 646
+Q D
Sbjct: 912 AKQLFEGMSD 921
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 881 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 941 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELK----ESGLNP 996
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 997 DVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1056
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1057 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1094
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + + +L+
Sbjct: 934 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N H L+ L ++ M+K G+ D+ +YN L+ +AG A
Sbjct: 994 LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1054 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109
Query: 404 LIN 406
L N
Sbjct: 1110 LPN 1112
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 198/462 (42%), Gaps = 44/462 (9%)
Query: 207 VNLAIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTI 262
V A R A VP + F VR + + AL D S+ + P MY I
Sbjct: 100 VEAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMY--HVI 157
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
I+ G Y + + E L ++ TL+ N ++N + + LE+ + + G
Sbjct: 158 IESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGC 217
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLE------AKGVLKLDVFTYSTIVKVFA 374
AD+ SYN +LK C A +E+ E+ + A+ D+ Y+TI+
Sbjct: 218 EADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGIC 277
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++A ++ M S G+ PN + +++++ +A E+A L EM Q C +
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337
Query: 435 CCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKD 486
NIL+ + DR L ++ T V G +G D +
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML---- 393
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
+ N P+ KP T +Y I++K C+ V A LM+ M G
Sbjct: 394 ---LKNMPS-------------CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +++ +I+ G VE A+++LK M +G +PD+++Y+T I ++ + ++A
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L M + I PN++TY ++ A +R G + +V Q QD
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQD 539
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M + G + + ++N ++ C G L ++ +K + G D+ +YST+
Sbjct: 427 ELMSRMIQQGCLPNPVTFNTIINFLCKKG---LVEQAIELLKQMLVNGC-NPDLISYSTV 482
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ A + AL++ M++ G+TPN IT+SS+ A A G +++ + +F+ + A
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDA 540
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 181/395 (45%), Gaps = 27/395 (6%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDL 305
SPN+ T+I+ G+C G K+ + +D++ N+ +N+L++ +
Sbjct: 227 SPNLITFNTVIN--GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ K M + V + ++N+L+ C N A +++ E ++++G LK V T
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE---MQSQG-LKPTVVT 340
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+++V + A + ++MLS+ + PN IT+++LIN L+E+A LF+ +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G PN N LL + + + AF L + L K + Y N +
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTY--NCLIVGFCREG 457
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+ + N N + + K T TYNIL+ A C KA L++EM G
Sbjct: 458 KMEEVKNLLNEM---------QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+H+++ IL++ GN+ AL + K M ++G +VV Y I+ R +L+ A
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
L EM + PN TY + G L +++
Sbjct: 569 GLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 49/384 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + ++ N+ FN+++N L +V +M+ G ++ +YN L+ C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +K + V V T++ ++ F + ALKV E+M S G+
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSV-TFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++SL+N N G + +A L +EML + +PN N L+ + + A L
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS----HYSSFDK---- 507
F D I KQ +T PN + + Y F K
Sbjct: 396 F--------------------DNIG------KQGLT--PNVITFNTLLHGYCKFGKMEEA 427
Query: 508 --------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
F P +TYN L+ C + VK L+NEM+ G+ + +++ ILI A
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISA 487
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A +++ M + G+ P + Y + L+ A +L ++M+ N
Sbjct: 488 WCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWAN 547
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+VTY L++ R G L + L
Sbjct: 548 VVTYNVLIQGYCRKGKLEDANGLL 571
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 35/279 (12%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V ++M+ ++PN IT++++IN G + +A + ++M G PN N L+
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG-- 274
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT---PNFVPNSH 501
C+ R +++++ + K V +++S S+T F + +
Sbjct: 275 -YCKMGRVGKMYKADAILKEMVE---------NKVS------PNSVTFNVLIDGFCKDEN 318
Query: 502 YSSFDKRF------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTI 553
S+ K F KPT TYN L+ C + K L++EM + L PN I++
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI+ +E A ++ + + G++P+V+ + T + + ++++AF L + M
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQ------QCLAVYQD 646
PN TY L+ R G + EV+ QC V D
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 507 KRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K + F P TYN L+ C Y+ A++ EM +SPN +++ +LID
Sbjct: 257 KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
N+ AL++ + M+ G+ P VV Y + + +L +A L +EM ++PN++TY
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + L E ++ ++ ++ K G
Sbjct: 377 NALINGYCKKKLLEEARE---LFDNIGKQG 403
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%)
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G + K M +SP+++ + T I + +L +A + ++MK + PN+VTY TL+
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272
Query: 626 RARSRYGSLHEVQQCLAVYQDM 647
+ G + ++ + A+ ++M
Sbjct: 273 DGYCKMGRVGKMYKADAILKEM 294
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 178/393 (45%), Gaps = 51/393 (12%)
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ L+ + +N L+NV + + LK V M G+ D+ ++NIL+KA C A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRA------ 224
Query: 344 QEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+I + +E G L D T++T+++ F + AL+++E M++AG + +T
Sbjct: 225 HQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTV 284
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L++ G +E+ + +EM G P+ N L+ A +
Sbjct: 285 NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL----- 339
Query: 462 SKTQVALGEDYDGNTDRISNM--------EHKDKQSITN-------TPNFVP-NSHYSSF 505
V L E +D + +++ E ++ I N +PN V N+ S+
Sbjct: 340 ---DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396
Query: 506 DKRFSFK---------------PTTTTYNILMKACC-TDYYRVK-ALMNEMRTVGLSPNH 548
K + P T+N L++ C T+ +R+ L EM+T G P+
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +LID+ G +E AL +LK M G S +VV Y T I ++KR+++A +F+E
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M+ I N+VTY TL+ + + E Q +
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLM 549
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 142/647 (21%), Positives = 256/647 (39%), Gaps = 86/647 (13%)
Query: 42 SSSSLSSIPTVHSSQTALLSTVRRDL--SSRNDYYADMASKLAKDGRLEEFAMIVESVVV 99
S S+LS PT Q +R L S D D+ +K ++I E V+
Sbjct: 54 SFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLR 113
Query: 100 SEGNVSKFASMLSL--EMVASGIVKSIREGRI-------------DCVVGVLKKLNELGV 144
G F SM + EM +G IR G D V V+ + E
Sbjct: 114 KLGKDGSFGSMRRVLQEMKHTGC--EIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFG 171
Query: 145 APLELF----------DGSGFKLLKNECQRLLDSG---EVEMFVGLMEVL---EEFRLPV 188
L+ F DG+ KL++ R++ G +V F L++ L + R +
Sbjct: 172 LKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAI 231
Query: 189 KELDEE------------FRIVQLCVNKPDVNLAIRY-----ACIVPRADILFCNFVREF 231
++E ++Q + + ++N A+R A P +++ V +
Sbjct: 232 LMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGY 291
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL 289
K+ + L D P+ + ++++ G+C G + I + + +
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN--GLCRIGHVKHALEILDVMLQEGFDP 349
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ +NSL+ +++ +E+ M + +YN L+ C A E+
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL- 408
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ L +KG+L DV T++++++ ++A+++ E+M + G P+ T++ LI++
Sbjct: 409 --ARVLTSKGILP-DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDS 465
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKT 464
+ G +E+A+ L +EM +GC N N L+ + + + A +F L S+
Sbjct: 466 LCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG R+ Q + KP TYN L+
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLME-----------------GLKPDKFTYNSLL 568
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + ++ M + G P+ +++ LI +G VE A ++L+ ++ GM
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y IK R KR +A LF EM P+ VTY + R
Sbjct: 629 LAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRG 675
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 149/372 (40%), Gaps = 43/372 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M+ G ++ IL+++ L E V +E + LKLD FTY+ ++
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIES---YAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLL 183
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
V D ++ V M+S G+ P+ T++ LI A A + A+ + EEM G
Sbjct: 184 NVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLS 243
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + L+Q +E + A R + + VA G T + + + I
Sbjct: 244 PDEKTFTTLMQGFIEEGNMNGALR------IREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297
Query: 491 TNTPNFVPNSHYSSF-DKRFSFK----------------------------PTTTTYNIL 521
+F+ F RF+F P TYN L
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + ++N+M SPN +++ LI VE A ++ +++ G+
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 417
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV + + I+ + + A LFEEMK P+ TY L+ + G L E
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA-- 475
Query: 640 CLAVYQDMWKAG 651
L++ ++M +G
Sbjct: 476 -LSLLKEMESSG 486
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 41/349 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
SPN T+I ++ + L S+ + ++ FNSL+ N H +
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH--RLA 440
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+++ M+ G D +YN+L+ + C G +E +K +E+ G + +V TY+T
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGR---LEEALSLLKEMESSGCSR-NVVTYNT 496
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F K + A ++ ++M G++ N +T+++LI+ VE+A L ++ML G
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRIS 480
+P+ N LL A +A + ++ T ++ + LG G + S
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
+ + K P TYN ++KA + +A L E
Sbjct: 617 RLLRTVQL------------------KGMVLAP--QTYNPVIKALFREKRTSEAVRLFRE 656
Query: 539 MRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
M G P+ +++ ++ C G G + A+ L M + G PD ++
Sbjct: 657 MMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA- 277
R + + + F K + + A +D + S N+ T+ID G+C + A
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID--GLCKNRRVEEAA 546
Query: 278 -IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + + + + + + +NSL+ A D+K ++ + M G D +Y L+
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG LA + ++ ++ KG++ L TY+ ++K K A+++ +M+ G
Sbjct: 607 SKAGRVELASRL---LRTVQLKGMV-LAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662
Query: 395 TPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPN 432
P+ +T+ + C+ G + +A+ EM G P+
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 194/424 (45%), Gaps = 47/424 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P++ +++D G+C D RA + +++ + V + + F++L+ NA +
Sbjct: 78 APDVVTYTSVVD--GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++YK + D S + L+ C A E++ E++ E G K DV TY+
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE-DGAWKPDVVTYTA 194
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + A+K+ M PN +T+SSL++ AG ++QA+ LF M G
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEH- 484
C PN L+ A + D A L T + V+ DG R+ +E
Sbjct: 255 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC-RLGRIEEA 313
Query: 485 ----KDKQSITNTPNFVPNS-------HYSSFDK-RF---------SFKPTTTTYNILMK 523
K+ + + P+ + + + S ++ RF P TY+I++
Sbjct: 314 KQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 373
Query: 524 ACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y R K + EM ++PN ++++ LID +G V A+++LK + +
Sbjct: 374 G----YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PDVV YT I+ + R ++A +L EEM + +++P++ T+ +++ A R G + E
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485
Query: 638 QQCL 641
+ L
Sbjct: 486 WKLL 489
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 144/322 (44%), Gaps = 25/322 (7%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+++ C A T A E+ E++ + K V D+ TYST++ F A ++
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMR--DGKSVAP-DLVTYSTVINGFCKQGEMDRACEI 67
Query: 386 KEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+M++ G+ P+ +T++S+++ G +++A + EM G EP+ + L+
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
A + D A +L++ S ++ D ++ I+ + + + Y
Sbjct: 128 NARKVDEALKLYKEILTSSCRL----DAVSSSALITGLCRERR----------IGEAYEL 173
Query: 505 FD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
F + ++KP TY L+ C KA ++ M PN ++++ L+
Sbjct: 174 FQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 233
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+++ AL + + M G P+VV YTT I + ++ A L +EM +
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
V+Y LL R G + E +Q
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQ 315
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 192/472 (40%), Gaps = 88/472 (18%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
EL +E + + KPDV + + + F K +L A++ +
Sbjct: 172 ELFQEMEMREDGAWKPDV--------------VTYTALIDGFCKSGNLEKAMKMLGVMEG 217
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ +++ G+C GD ++ ++ + S+ N+ + +L++ AH +
Sbjct: 218 RKCVPNVVTYSSLLH--GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ M AD SYN LL C G A++++ K + AK L D T
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF---KEMAAKSCLP-DRIT 331
Query: 366 YSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+ +V+ F +A + A + E+M +AG+ P+ +T+S ++ + A +A +EM
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ PN+ + L+ +A + + A + + N D
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK-----------------NVD------- 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
KP TY I+++ C +AL + EM
Sbjct: 428 ---------------------------KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ ++ +I A G+++ A ++L M G+ P +V YTT ++ R+ R++ A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Query: 603 FSLFEEM----KHYQIQPNLV---TYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ LFE M K NLV + L+R + E+ + +AV +++
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKA---REIDKAMAVVEEL 569
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 50/272 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M V + +Y+ L+ C AG A E+ K V K DV TY+ +
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL--------KNVDKPDVVTYTIV 437
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + AL + E+M++ V P+ T++S+I A G +++A L M G
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP LL+ + + A+ LF M K K+S
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEV-----------------------MRRKAKKS 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
++ N VP +S+ L++ C + + A++ E+R+ P
Sbjct: 535 -SSAANLVPEQAFSA----------------LIRGLCKAREIDKAMAVVEELRSRECEPA 577
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGM 579
++D +G E A +++ + + G+
Sbjct: 578 EEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 43/380 (11%)
Query: 286 NVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
NV L++Y F ++ V D F EV M+++G+ ++ Y L+ CC G+
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGF--EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++++ ++ L+ + +TY+ ++ F + +++ E M G+ PN T+
Sbjct: 217 RGKQLFYKMGELDVVA----NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
+S+I C N G + A LF+EM + G N N L+ + + A RL +
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 459 WTLSKTQVALGEDYDG-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LS ++ DG N D+ S++ ++ K S P
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS--------------------GQSP 372
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYNIL+ + V ++ EM GLSP+ +++TIL+DA S N+E A QI
Sbjct: 373 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M + G+ D+ Y I +K+A LF+ + ++PN V Y T++ +
Sbjct: 433 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 492
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
GS + + L + ++M + G
Sbjct: 493 GSSY---RALRLLKEMGENG 509
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 177/383 (46%), Gaps = 26/383 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + T+ID C GD + + ++ + +V N Y + L+N K +E
Sbjct: 196 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 255
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ G++ ++ +YN ++ CC G A E++ E++ +GV +V TY+T++
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE---RGV-ACNVVTYNTLI 311
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ M G++PN I++++LI+ + G +++A LF +M +G
Sbjct: 312 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ NIL+ EA R + LS ++V D R N+E +
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV-RSDNIEKAFQ 430
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
YSS +K Y +L+ C D L + + L
Sbjct: 431 I-------------YSSMEKA-GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 476
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++LK M E+GM P+V +Y + I++ + ++ +A L
Sbjct: 477 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVL 536
Query: 606 FEEMKHYQIQPNLVTYITLLRAR 628
++M ++P++ + + +AR
Sbjct: 537 LKDMIELGLKPSISIWNMISKAR 559
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 21/302 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG +KLDV+++ ++K + + +V M G++PN + +++LI+ C G
Sbjct: 155 ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 214
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+ LF +M + N +L+ F L K + L E
Sbjct: 215 IERGKQLFYKMGELDVVANQYTYTVLING-------------FFKMGLKKDGIELYEKMK 261
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
T + N+ + + N+ + FD + TYN L+ C +
Sbjct: 262 -LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRV 320
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++A LM M+ GLSPN IS+ LID GN++ A + M+ G SP + Y
Sbjct: 321 LEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 380
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I +K + EM+ + P+ VTY L+ A R + +++ +Y M K
Sbjct: 381 IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN---IEKAFQIYSSMEK 437
Query: 650 AG 651
AG
Sbjct: 438 AG 439
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 110/249 (44%), Gaps = 45/249 (18%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R ++ A R K+ SPN+ T+ID G C G+ K+ +++ ++S + +
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLID--GYCSIGNLDKASSLFNQMKSSGQSPS 373
Query: 291 IYVFNSLMN-------------------------------------VNAHDLKFTLEVYK 313
+ +N L+ V + +++ ++Y
Sbjct: 374 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 433
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K G++AD+ Y +L+ C+ G+ A +++ + + LK + Y+T++ +
Sbjct: 434 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH----LKPNDVIYNTMIYGY 489
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL++ ++M G+ PN +++S I +A L ++M++ G +P+
Sbjct: 490 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSI 549
Query: 434 QCCNILLQA 442
N++ +A
Sbjct: 550 SIWNMISKA 558
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 27/400 (6%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + GD K ++E + + ++ + L+N+ A K + LEV K M
Sbjct: 453 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 512
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ ++ K +K DV Y+ I+ F
Sbjct: 513 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL----IKDGIKPDVVLYNNIITAFCG 568
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ ++M P T T+ +I+ A G +++A+ +F+ M +GC P
Sbjct: 569 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 628
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + ++A ++ TL+ N + + H S+ +T
Sbjct: 629 YNALILGLVEKRKMEKAEQILDEMTLAGVSP--------NEHTYTTIMH-GYASLGDT-- 677
Query: 496 FVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
++ F K + TY L+KACC AL EM + N +
Sbjct: 678 ---GKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIY 734
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILID G++ A +++ M+ +G+ PD+ YT+ I C ++ +++A EEMK
Sbjct: 735 NILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 794
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL+ +R SL E + L+ +++M +G
Sbjct: 795 VGVKPNVKTYTTLINGWAR-ASLPE--KALSCFEEMKLSG 831
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 187/446 (41%), Gaps = 73/446 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R++ + + +V+ +L++ A D++ L + M++ G+ + +Y
Sbjct: 325 GDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 384
Query: 328 NILLKACCLAGNTVLA----QE-----------IYGE-----------------VKHLEA 355
+IL+ GN A QE IYG V+ +E
Sbjct: 385 SILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEE 444
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + L V E G+ P+ IT+ LIN A G V
Sbjct: 445 EGIDAPIDI--YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKV 502
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + +EM AG + N + ++L+ ++ + AF +F K V L +
Sbjct: 503 SKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNI 562
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
G DR + M+ + + T T F+P H F ++ K
Sbjct: 563 ITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT--FMPIIH--GFARKGEMKKALDVFDMMR 618
Query: 513 -----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
PT TYN L+ KA +++EM G+SPN ++T ++ G+
Sbjct: 619 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 678
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +R++G+ DV Y +K C +S R++ A ++ +EM I N Y L+
Sbjct: 679 KAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILI 738
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+R G + E + Q M + G
Sbjct: 739 DGWARRGDIWEAADLM---QQMKREG 761
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A + D SPN + TI+ GD K+ + LR + + L++Y
Sbjct: 638 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVY 697
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 698 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADL---M 754
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ +GV + D+ TY++ + + A Q A K E+M S GV PN T+++LIN A
Sbjct: 755 QQMKREGV-QPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 813
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A L E+A+ FEEM +G +P+ + L+ +
Sbjct: 814 ASLPEKALSCFEEMKLSGLKPDRAVYHCLMTS 845
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F +K ++ AL +D + P ++ +I K+ I +++
Sbjct: 594 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 653
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+ N + + ++M+ A D + ++ G+ D+ +Y LLKACC +G
Sbjct: 654 LAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRM- 712
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 713 --QSALAVTKEMSAQNIPR-NTFIYNILIDGWARRGDIWEAA-DLMQQMKREGVQPDIHT 768
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S INAC+ AG +++A EEM G +PN + L+ A ++A F
Sbjct: 769 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 828
Query: 461 LS 462
LS
Sbjct: 829 LS 830
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F + A+ +K P II G+ K+ +++
Sbjct: 557 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 616
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V ++ ++ M GV + +Y ++ G+
Sbjct: 617 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGD 676
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + L +G L+LDV+TY ++K + Q AL V ++M + + NT
Sbjct: 677 TGKA---FTYFTKLRDEG-LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 732
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G + +A L ++M + G +P+ + AC +A RA +
Sbjct: 733 IYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 787
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 106/268 (39%), Gaps = 37/268 (13%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++N G + +A FE+M G EP+S L+ A + A
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368
Query: 456 FRSWTLSKTQVAL--------GEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSF 505
R +++L G GN + + E K+K S N
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLN------------- 415
Query: 506 DKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
Y ++ A C + + +AL+ EM G+ + ++D G+
Sbjct: 416 ---------AIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGD 466
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L + + +E G++P V+ Y I + + ++ +A + +EM+H I+ N+ TY
Sbjct: 467 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 526
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + L + A+++D+ K G
Sbjct: 527 LING---FLKLKDWANAFAIFEDLIKDG 551
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+PR ++ + + ++ D+ A K+ P+++ + I+ C GD ++
Sbjct: 727 IPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT 786
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
E+++S V N+ + +L+N A + L ++ M+ G+ D A Y+ L+
Sbjct: 787 KTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 39/333 (11%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K K D TY+ ++ A W+ A+ +
Sbjct: 153 YNMMIRLHARHNRTDQARGLFFEMQ----KCRCKPDAETYNALINAHGRAGQWRWAMNIM 208
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DML A + P+ T+++LINAC ++G ++A+++ ++M G P+ NI+L A
Sbjct: 209 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSG 268
Query: 447 CQFDRA---FRLFRSWTLSKTQVALG---------EDYDGNTDRISNMEHKDKQSITNTP 494
Q+ +A F L + + + YD D ++M+ K + P
Sbjct: 269 TQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC---HP 325
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ V T T I + + C +A N M GL PN +S+ L
Sbjct: 326 DVV-----------------TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNAL 368
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ A G ALQ+ ++++G PDVV+YT+ + RS++ ++A +F+ +K +
Sbjct: 369 LGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNL 428
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+PN+V+Y L+ A YGS ++ + + ++M
Sbjct: 429 KPNIVSYNALIDA---YGSNGLLEDAIEILREM 458
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 163/383 (42%), Gaps = 67/383 (17%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + +N+L+N + A ++ + + +M + + ++YN L+
Sbjct: 168 QARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 227
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC +GN W+ AL V + M
Sbjct: 228 NACGSSGN---------------------------------------WKEALNVCKKMTD 248
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P+ +T + ++ A + +A+ FE + P++ NI++ V+ Q+D+
Sbjct: 249 NGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDK 308
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFS 510
A +F S K++ H D + T+ + + H + + F+
Sbjct: 309 AVDIFNSMKEKKSEC-----------------HPDVVTFTSMIHLYSVCGHIENCEAAFN 351
Query: 511 ------FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
KP +YN L+ A +AL NE++ G P+ +S+T L++A G S
Sbjct: 352 MMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSR 411
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A +I K+++ + + P++V+Y I + L+ A + EM+ +I PN+V+
Sbjct: 412 KPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSIC 471
Query: 623 TLLRARSRYGSLHEVQQCLAVYQ 645
TLL A R G ++ L+ +
Sbjct: 472 TLLAACGRCGQKVKIDTVLSAAE 494
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 31/338 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ SYN LL A G A +++ E+K + + DV +Y++++ + ++
Sbjct: 357 GLKPNIVSYNALLGAYAARGMENEALQVFNEIK----QNGFRPDVVSYTSLLNAYGRSRK 412
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
Q A ++ + + + PN +++++LI+A + GL+E A+ + EM Q PN
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICT 472
Query: 439 LLQACVEACQ---FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
LL AC Q D + VA Y+ N+ DK
Sbjct: 473 LLAACGRCGQKVKIDTVLSAAEMRGIKLNTVA----YNSAIGSYINVGEYDKAI------ 522
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
Y+S K+ K + TY +L+ CC + + + M EM + L + ++
Sbjct: 523 ----DLYNSMRKK-KIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSS 577
Query: 554 LIDA----CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+I A G + A +M+ G SPDVV YT + +++ ++ ++LFEEM
Sbjct: 578 IICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEM 637
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++ + + L+RA ++ G V L++ Q M
Sbjct: 638 EENDVKLDTIACAALMRAFNKGGQPGRV---LSLAQSM 672
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 25/295 (8%)
Query: 170 EVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
+V + L+ R P K E F++++ KP++ + Y ++ D N +
Sbjct: 396 DVVSYTSLLNAYGRSRKPQKA-REIFKMIKRNNLKPNI---VSYNALI---DAYGSNGLL 448
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E D + LR + K H PN+ T++ CG CG +K + + + L
Sbjct: 449 E-----DAIEILREMEQDKIH---PNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKL 500
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N +NS + +N + +++Y +M+K + +D +Y +L+ CC A
Sbjct: 501 NTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFM 560
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED----MLSAGVTPNTITWSS 403
E+ HL+ L + YS+I+ ++ + E M S G +P+ +T+++
Sbjct: 561 EEMMHLK----LPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTA 616
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++A A E+ LFEEM + + ++ C L++A + Q R L +S
Sbjct: 617 MLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQS 671
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ ++ K++ P++ ++++ G K+R I++ ++ N+ NI +N+L++
Sbjct: 381 ALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALID 440
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L+ +E+ + M++ + ++ S LL AC G V + E +G
Sbjct: 441 AYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAA---EMRG 497
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ KL+ Y++ + + + + A+ + M + +++T++ LI+ C +A
Sbjct: 498 I-KLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 556
Query: 418 MHLFEEMLQ 426
+ EEM+
Sbjct: 557 LSFMEEMMH 565
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 197/440 (44%), Gaps = 27/440 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P + F + F + A+ +D KK P+++ ++D G+C GD +
Sbjct: 280 PCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVD--GLCKQGDVLTG 337
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ +T N+ ++SL++ A ++ E++K ++ G D Y+I+L
Sbjct: 338 YYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
CC + + +++ ++ H D + YS+++ + + + AL+V E M+S G
Sbjct: 398 CCQHLDLEICYDLWNDMVHHN----FVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDG 453
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN +T + L++ +N GL+ +A +++ Q G P+ +++ C+ ++
Sbjct: 454 ICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHG---LCKVNKPN 510
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ W + + G Y +T S + +++ F +Y D+ KP
Sbjct: 511 DM---WGIFADMIKRG--YVPDTVLYSIIIDGFVKALDLQEAF--RLYYKMVDE--GTKP 561
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ C D V L M GL+P+ I +T LI N++ AL+I
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIF 621
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M +G+S D YT I + + A EEM + + P +VTY L+ +
Sbjct: 622 REMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKI 681
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + ++ +A+Y M +AG
Sbjct: 682 G---DEKKAMAMYNSMLQAG 698
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 155/385 (40%), Gaps = 60/385 (15%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYN 328
M +R++++D++S + N+Y ++ LM++ H K LE + GV + A+Y
Sbjct: 193 MYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYA 252
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
L C A + + ++ L +G + + ++ ++ F A++V +
Sbjct: 253 TYLYGLCHAKQV---KSAWNFLQMLCQRG-YPCNNYCFNAVIHGFCHDGQVHKAIEVFDG 308
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G P+ ++S L++ G V ++ EM + G PN + LL A +
Sbjct: 309 MKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGR 368
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ AF LF+ KD+
Sbjct: 369 VELAFELFKRL-------------------------KDQ--------------------- 382
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
FK Y+I++ CC D L N+M P+ +++ LI A ++
Sbjct: 383 -GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++ ++M DG+ P+VV T + + +AF ++++ + + P+L TY ++
Sbjct: 442 ALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIH 501
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +++ ++ DM K G
Sbjct: 502 GLCK---VNKPNDMWGIFADMIKRG 523
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ + IID D ++ +Y + + NI+ + SL+N HD K + +
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTL 585
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K+M G+ D Y L+ C N A EI+ E +E +G L D F Y+ ++
Sbjct: 586 FKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFRE---METEG-LSADSFVYTCLIG 641
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ A E+M++ G+TP +T++ LI G ++AM ++ MLQAG P
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701
Query: 432 NSQCCNIL 439
+++ IL
Sbjct: 702 DAKLSCIL 709
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDG 323
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 35/385 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDM 647
+ +++ Y S + ++ L +Y M
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSM 389
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 164/398 (41%), Gaps = 56/398 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P +I+ CG G++ K+ + + + V ++ N +++ N +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ V +D + NI++ G A E++ ++ K DV TY++I+
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK--CPPDVVTYTSIMH 196
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + + M++ GV PN + ++SL+ A A+ G+ +A+ +F + + G P
Sbjct: 197 SYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRP 256
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A + Q ++A +F
Sbjct: 257 DIVSYTSLLNAYGRSAQPEKAREVFNKM-------------------------------- 284
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
K+ S KP +YN L+ A + +A L++EM G+ P+ +
Sbjct: 285 ---------------KKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S + L+ ACG + IL+ R G+ + VAY + IK + ++A L+ M
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++P+ VTY L+ S+ G E L ++DM
Sbjct: 390 RESNVKPDAVTYNILISGSSKLGKYTE---SLRFFEDM 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 176/446 (39%), Gaps = 80/446 (17%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ME KD +
Sbjct: 313 VGLLHE-----------------------ME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAI----------------------KV-CVRSKRLKQAFSLFE 607
MRE + PD V Y I KV + +L +A S F
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFS 445
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGS 633
MK P+++TY TL++A + G
Sbjct: 446 SMKKSGCFPDVLTYTTLIQAYNAGGG 471
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 173/419 (41%), Gaps = 71/419 (16%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ + G+ +L +++R ++ P++ +I+ I G +AI++ + ++ V
Sbjct: 164 IGQCGEAIELFNSMR----ERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGV 219
Query: 288 TLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +NSL+ A + L ++ ++K G+ D+ SY LL A + A+E
Sbjct: 220 KPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKARE 279
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ ++K K K + +Y+ ++ + A + A+ + +M G+ P+ ++ S+L+
Sbjct: 280 VFNKMK----KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLL 335
Query: 406 NACA---------------------------NAGL--------VEQAMHLFEEMLQAGCE 430
AC N+G+ E+A+ L+ M ++ +
Sbjct: 336 AACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVK 395
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ NIL+ + ++ + R F SK S E K ++
Sbjct: 396 PDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS--------------STKEGKLSEA- 440
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNH 548
S +SS K F P TY L++A + R L EM G+ P+
Sbjct: 441 --------ESTFSSMKKSGCF-PDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 491
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I + L++A G E LQ+++ M++ + + +Y I C + K A + E
Sbjct: 492 IICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 550
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 21/237 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-----------GEVKHLEAKGVLK 360
Y +M++ V D +YNIL+ G + + E K EA+
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFS 445
Query: 361 --------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
DV TY+T+++ + W+ A + ++M G+ P+ I SSL+ A G
Sbjct: 446 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGG 505
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
E+ + L E M + N + ++ +C + A + S + +++G
Sbjct: 506 EPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVG 562
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 189/440 (42%), Gaps = 65/440 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +FGK DL + R ++ + +P++ +I+ GD ++ + +
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N++ +N+++ + A L LE+ +NM+ LGV SY + + +G+
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + + +K +G++ + + + A+ A + D+ G++P+++
Sbjct: 461 PAKAIDTFETMKK---RGIMP-SIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ L+ + AG +++A L EM+ GCEP+ N L+ +A + D A+++F
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF--- 573
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
R+ N++ PT TYN
Sbjct: 574 -----------------GRLKNLK---------------------------LAPTVVTYN 589
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ + +KA L M G PN I++ L+D + V+ AL++ M
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+PDV+ Y T I +R R+ AF F +MK + + P+ VT TL+ R+G + +
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDA 708
Query: 638 ---------QQCLAVYQDMW 648
Q CL W
Sbjct: 709 IKVVMEFVHQACLQTNSQFW 728
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 185/434 (42%), Gaps = 77/434 (17%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A+IL CN V + ++ ++ KK L + N++ + K+ I+
Sbjct: 748 AEILVCNSVCQ--DDHVMLPLIKVLCKRKKALDAQNVF------------DKFTKNLGIH 793
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L S N + + L+ N + LE++++M+ G + +YN+LL A G
Sbjct: 794 PTLESYNC-----LMDGLLGSNFTEK--ALELFEDMKSAGTHPNNFTYNLLLDA---HGK 843
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ ++Y + ++G + + T++ I+ + AL + +++S +P
Sbjct: 844 SKRINKLYDLYSEMRSRGC-EPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ LI+ AG EQAM +FEEML GC PNS NIL+ ++ + D A LF+
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K+ I +P +Y
Sbjct: 963 V--------------------------KEGI---------------------RPDLKSYT 975
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL++ C +A+ E++ GL P+ +S+ +I+ G S ++ AL + M+
Sbjct: 976 ILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNR 1035
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+SPD+ Y I + ++ A ++EE++ ++P++ TY L+R S G+
Sbjct: 1036 GISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGN---K 1092
Query: 638 QQCLAVYQDMWKAG 651
Q +V++ M G
Sbjct: 1093 DQAFSVFKKMMVVG 1106
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 181/428 (42%), Gaps = 47/428 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ Y P+M ++ G GD K + E+++S + NIY + +
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A + ++K M G D+ +Y +L+ A C AG A+E+Y +++
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
D TY T++ F + + +M G P+ +T++ LI A +G V++A
Sbjct: 339 ----DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRA 394
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA--LGEDY 472
+ + M G PN N ++ ++A + D A L S + T + L DY
Sbjct: 395 FDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDY 454
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
G + D +T + + KR P+ + AC Y +
Sbjct: 455 YGKSG--------DPAKAIDT--------FETMKKR-GIMPS-------IAACNASLYTL 490
Query: 533 ---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ + N++ GLSP+ +++ +L+ +G ++ A Q+L M G PDV
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I ++ R+ A+ +F +K+ ++ P +VTY LL + G ++ + L +
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEG---KILKALEL 607
Query: 644 YQDMWKAG 651
+ M ++G
Sbjct: 608 FGSMTESG 615
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + ++ +Y + KA + G + + + K E +L + ++Y+ ++
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGG--IGRAPFALRKMTEVGFIL--NAYSYNGLI 208
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + ALKV + M+S G+ P+ T+S+L+ A G + M+L EEM G
Sbjct: 209 HLLLPG-FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN I ++A A + D A+ +F+ ++ T + G D+ +
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMR 540
K + S S P TY LM D VK NEM
Sbjct: 328 YVKMRAS--------------------SHSPDRVTYITLMDKFGKVGDLETVKRFWNEME 367
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +P+ +++TILI+A SG+V+ A +L +M G+ P++ Y T I ++++RL
Sbjct: 368 VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLD 427
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A L E M+ ++P +Y+ + YG + + + ++ M K G
Sbjct: 428 EALELLENMESLGVKPTAFSYVLFI---DYYGKSGDPAKAIDTFETMKKRG 475
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + FGK ++ A + K P++ +++ I G ++ +E+
Sbjct: 937 VIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEE 996
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ + + +N ++N + L L ++ M+ G+ D+ +YN L+ +AG
Sbjct: 997 LKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGK 1056
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A ++Y E++ + L+ VFTY+ +++ + + A V + M+ G +PNT
Sbjct: 1057 VDVAVKMYEELQLVG----LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112
Query: 400 TWSSLINACANAGLVEQ 416
T++ L N AGLV
Sbjct: 1113 TFAQLPNKYPRAGLVHN 1129
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 161/374 (43%), Gaps = 52/374 (13%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+Y + AI+E++ + N + FN L+ A + + ++ M++ D+ ++
Sbjct: 134 NYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFL 193
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C AG A E++ E + A G + D ++ +V+ AK + A +V
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHE---MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G P+ I ++++I+ A AG ++A+ + + ML C P IL+ + +A
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK 507
+RA LFR S F PNS Y+S
Sbjct: 311 LERAEELFRVMAAS--------------------------------GFRPNSVIYTSLIH 338
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+ + MK C+ L +EM G P+ I+ T++ID SGN E A
Sbjct: 339 GFA-------KSGRMKEACS-------LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + M G P+VV YTT I+ + R+ AF + + M + P+ VTYI LL
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 628 RSRYGSLHEVQQCL 641
+ G L E Q L
Sbjct: 445 FCKLGRLDEAAQLL 458
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 191/447 (42%), Gaps = 51/447 (11%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F + R A+ ++ K+ P+++ ++D G K+ ++ ++ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 287 VTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ M + A +K EV+ M+K G D +YN ++ AG+ A
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH---A 276
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
QE + ++ AK + +V TY +V A + A ++ M ++G PN++ ++S
Sbjct: 277 QEALKVLDNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---- 459
LI+ A +G +++A LF+EM++AG P+ +++ ++ F++A + F
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 460 ----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
++ T + G G R++N K I + P+S
Sbjct: 396 CKPNVVTYTTIIQGLSKIG---RVANAFRIMKGMIAH--GCFPDSVTYICLLDGFCKLGR 450
Query: 505 FDK---------RFSFKPTTTTYNILMKACCTDYYRVKALMNEM------RTVGLSPNHI 549
D+ + S P Y+ L+ C D V+ ++++ L P +
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLC-DGGSVEKTLDDLFEQSKAAAETLDPG-L 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQAFSLFE 607
+I++ C +G ++ A +I + M +G PD Y I RS+ R+++AF+L
Sbjct: 509 CCSIIVGLCK-TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSL 634
+++ P+ VTY L + G +
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEV 594
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 185/465 (39%), Gaps = 60/465 (12%)
Query: 215 CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
C P I + + K AL+ D P +++ G +
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ ++ + + N ++ SL++ + +K ++ M + G D+ ++ +++
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +GN A + + E+ +G K +V TY+TI++ + A ++ + M++
Sbjct: 374 GLCKSGNFEQAAKSFEEM----MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ------------------ 434
G P+++T+ L++ G +++A L +E+ + PN Q
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT 489
Query: 435 -------------------CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
CC+I++ C + + D A R+F + V+ G D
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLC-KTGRLDEACRIF------QRMVSEGCKPDAT 542
Query: 476 TDRI-SNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT--DYYR 531
T I N + ++ N V + D ++ + P TY L C + R
Sbjct: 543 TYNILINGLCRSRE------NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ E + G + + +++T L G V+ A+ + + M G +PD AY I
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ K+L+ A F+EM +P + TY L++A G++ E
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ ++++++ Q + + ++N + L+ + + M G
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKP 681
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A+Y L++A C AGN E + + + A+G L V Y ++ F A A
Sbjct: 682 TVATYTALVQALCHAGNV---DEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
LK+ EDM+S G P +T +SL + +G E+A L +EM G P++
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 119/339 (35%), Gaps = 61/339 (17%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
R + E + T NI + N L + ++ + +++K+G + D +Y L C
Sbjct: 531 RMVSEGCKPDATTYNILI-NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLC 589
Query: 336 LAGNTVLAQEIYGEVKHLE---AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G E+ VK LE ++G DV Y+ + A+ + ++M+
Sbjct: 590 KIG------EVDRAVKMLEEASSRG-WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ + +IN +E A F+EM+ G +P L+QA A D A
Sbjct: 643 GGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F F S +A GE
Sbjct: 703 FHRFES------MLARGE----------------------------------------LV 716
Query: 513 PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ Y+ L+ C +V A L +M + G P ++ L D SG E A +
Sbjct: 717 GSVMIYDALIHGFCK-ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+L+ M G P +T + +S + L +E
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 93/255 (36%), Gaps = 50/255 (19%)
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG + T++ L+N Q + EEML+AG PN+ NIL+++ + D
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F KR
Sbjct: 173 AVTCFEIM-----------------------------------------------KRKRC 185
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
KP T+ IL+ C KA + +EM +G + P+ T ++ + V+ A
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M + G PD +AY T I ++ ++A + + M P VTY L+ +
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 629 SRYGSLHEVQQCLAV 643
+ G+L ++ V
Sbjct: 306 CKAGTLERAEELFRV 320
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 173/383 (45%), Gaps = 29/383 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVM 321
G+C G ++RA+ + + N L +N+L+N +F +YKNM G
Sbjct: 314 GLCRMGKVDEARAMLSKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D ++NI++ C G V A E E+ K + +V TY+ ++ F ++
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEM----VKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M + G++ NT+ ++ LI A G ++ A+ ++ EM GC+P+ N L+
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + + A L+R L E NT + + H + + +
Sbjct: 486 GLCKNDKMEEALGLYRDMLL--------EGVIANTVTYNTLIHAFLRL-----ELIQQAD 532
Query: 502 YSSFDKRFSFKP-TTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDAC 558
+ RF P TYN L+KA C K L+ +M + P+ S ILI++
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G V ALQ L+ M + G++PD+V Y + I + R ++A +LF ++ I P+
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652
Query: 619 VTYITLLRARSRYGSLHEVQQCL 641
VTY TL+ G ++ Q L
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLL 675
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN++L+ +A ++ + + ++G+ V+T+ ++K F A +
Sbjct: 167 SYNVVLEILVAGNCPKVAPNVFYD---MLSRGI-SPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G PN+I + LI+A + V +AM L EEM GCEP+ Q N ++ +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 446 ACQFDRAFRLFRSWTLSK-TQVALGEDY-------DGNTDRISNMEHKDKQSITNTPNFV 497
A + A +L L T AL + Y G D M K T N +
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTL 342
Query: 498 PNSHYSSFDKRF--------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
N + S RF F+P T+NI++ C Y V AL ++EM
Sbjct: 343 INGYVVS--GRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++TILID G+ E A +++ M G+S + V Y I + +++
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ EM +P++ T+ +L+ + + E L +Y+DM G
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA---LGLYRDMLLEG 507
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 26/331 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK LVSAL D K PN+ +ID G C G + ++ + + ++ ++LN
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILID--GFCKQGHFEEASKVVNSMSAKGLSLN 441
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N L+ D K L++Y M G D+ ++N L+ C +E G
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM---EEALG 498
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +GV+ + TY+T++ F + Q A K+ +M G + IT++ LI A
Sbjct: 499 LYRDMLLEGVIA-NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G E+ + L E+M P+ CNIL+ + + + A + R Q L
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM----IQRGL 613
Query: 469 GEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D I+ + + Q N N + P TYN L+ C
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK---------GIHPDAVTYNTLISRYCY 664
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILID 556
+ + L+ + + G PN I+W+ILI+
Sbjct: 665 EGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 58/387 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKL 318
+I+ G G Y S + E ++ + V+ NI +N+++N A D + L ++ M+
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AK 377
GV D+ +YN LL AC G L E K + G++ ++ TYS IV+ F K
Sbjct: 249 GVQPDLVTYNTLLSACAARG---LGDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGK 304
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++A+ +KE M S G P+ +++ LI A A G +++AM +F++M AGC PN+ +
Sbjct: 305 LEKVAMLLKE-MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
ILL + ++D LF ++ K+
Sbjct: 364 ILLNLYGKHGRYDDVRELF-------------------------LQMKES---------- 388
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILI 555
S +P TTYNIL++ Y V L +++ + PN ++ L+
Sbjct: 389 ------------SAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
ACG G E A +IL M G+ P AY+ I+ ++ +A F M +
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
+ TY +L+ +R G E + L+
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILS 523
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G EI+ E + ++GV++
Sbjct: 127 DWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE---MASQGVIR-S 182
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ E M V+PN +T++++INACA L E + LF
Sbjct: 183 VFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLF 242
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +F KT + G
Sbjct: 243 AEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF------KTMIEGG------------ 284
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
VP + TT +Y + +V L+ EM +
Sbjct: 285 --------------IVP-------------EITTYSYIVETFGKLGKLEKVAMLLKEMES 317
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +LI+A G+++ A+ + K M+ G P+ Y+ + + + R
Sbjct: 318 EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDD 377
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
LF +MK +P+ TY L+R G EV
Sbjct: 378 VRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 136/336 (40%), Gaps = 59/336 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++KN L ++++ K G+ + ++ K+++ + K + Y+
Sbjct: 103 LDIFKNRLSLN------DFSLVFKEFAARGDWQRSLRLF---KYMQRQIWCKPNEHIYTI 153
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + + ++ ++M S GV + ++++LINA G E ++ L E M +
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDK 487
PN N ++ AC A G+ D++G + M H+
Sbjct: 214 VSPNILTYNTVINAC-----------------------ARGDLDWEGLLGLFAEMRHEGV 250
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
Q P TYN L+ AC +A M M G+
Sbjct: 251 Q------------------------PDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P +++ +++ G G +E +LK M +G PD+ +Y I+ + +K+A +
Sbjct: 287 PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDV 346
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F++M+ PN TY LL ++G +V++
Sbjct: 347 FKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 382
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
+L + +S + K FA WQ +L++ + M PN ++ +I+ GL+E+
Sbjct: 109 RLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCS 168
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A Q++ + L +R
Sbjct: 169 EIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL--------------------ER 208
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ KR P TYN ++ AC D+ + L
Sbjct: 209 M---------------------------KRERVSPNILTYNTVINACARGDLDWEGLLGL 241
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + K M E G+ P++ Y+ ++ +
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L++ L +EM+ P++ +Y L+ A ++ GS+ E + V++ M AG
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKE---AMDVFKQMQAAG 354
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN ++++ G G Y R ++ ++ + + +N L+ V K + +
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ + +M +Y L+ AC G A++I + H+ KG++ YS +++
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI---LFHMNGKGIVPSSK-AYSGLIE 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + AL M G T++SLI+ A GL ++ + M + G
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N++ + +++ ++ Q++ A + F
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAF 557
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 19/243 (7%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
DV ++ A VP A + + +GK + K+ + P+ +I V
Sbjct: 345 DVFKQMQAAGCVPNAST-YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL--------MNVNAHDLKFTLEVYKNMQK 317
G G + + ++ DL +N+ N+ + L ++ +A + F +M
Sbjct: 404 FGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF------HMNG 457
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ +Y+ L++A G L E + G K + TY++++ FA
Sbjct: 458 KGIVPSSKAYSGLIEAY---GQAALYDEALVAFNTMNEVGS-KSTIDTYNSLIHTFARGG 513
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ + M G++ N ++S +I +G E+A+ F EM + CE + Q
Sbjct: 514 LYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLE 573
Query: 438 ILL 440
+L
Sbjct: 574 GVL 576
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM ++ CG G + ++ I + + + + ++ L+ + L
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + + +YN L+ G L +E + + G+ + + ++S I++
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGG---LYKEFEAILSRMREYGISR-NAKSFSGIIE 542
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ++ A+K +M + T ++ AGLV+++ F E+ +G P
Sbjct: 543 GYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILP 602
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-----LGEDYDGNTDRISNME 483
+ C ++L + ++D A L + KT+V+ +G+ G+ D SN +
Sbjct: 603 SVLCYCMMLAVYAKNGRWDDASELLDE--MIKTRVSSIHQVIGQMIKGDYDDDSNWQ 657
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 193/466 (41%), Gaps = 80/466 (17%)
Query: 210 AIRYACIVPRADILFCNF-------------VREFGKKRDLVSALRAYDAS--KKHLSSP 254
AIR+A D + NF +RE G + + A+R ++ + ++ +
Sbjct: 124 AIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNE 183
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
+ +I + G G ++ ++E ++ +Y F++L++ ++V+
Sbjct: 184 QGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVF 243
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M+ G+ ++ +YN ++ AC G ++ ++
Sbjct: 244 ETMKSSGLKPNLVTYNAVIDACGKGG-------------------------VDFNRAAEI 278
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F ++ML GV P+ IT++SL+ C GL E A +LF EML G E +
Sbjct: 279 F-------------DEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
N LL A + Q D AF++ ++ + V G G D N+ +
Sbjct: 326 IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385
Query: 485 KDKQSITNTPNFVPNSHYSSFDK--RF-------------SFKPTTTTYNILMKACCTD- 528
+ K + N+ S + K RF K TYN L+
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y VK + EM+ + PN ++++ LID G + A+++ + ++ G+ DVV Y+
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
I ++ ++ A S +EM I+PN+VTY +++ A R GS
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGS 551
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 193/460 (41%), Gaps = 66/460 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A++ ++ K PN+ +ID CG G D+ ++ I++++
Sbjct: 223 FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + FNSL+ V + ++ M G+ D+ +YN LL A C G
Sbjct: 283 LRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQM 342
Query: 341 VLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +I E+ KH+ +V TYST++ +A A AL + +M A + +
Sbjct: 343 DLAFQIMSEMPRKHIMP------NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 396
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++++L++ A G E+A+++ +EM +G + ++ N LL + +++ R+F
Sbjct: 397 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456
Query: 459 WTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ T L + Y ME + F K+ K
Sbjct: 457 MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV-----------------FREF-KKAGLK 498
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ A C + A+ ++EM G+ PN +++ +IDA G SG+ E +
Sbjct: 499 ADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDP 558
Query: 571 -------------LKIM----------REDGMSPDVVAYTTAIKVCVRSK--RLKQA--- 602
LK++ +ED + A K C K R +Q
Sbjct: 559 PYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILC 618
Query: 603 -FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++F +M I+PN+VT+ +L A SR S + L
Sbjct: 619 ILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLL 658
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 22/294 (7%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S ++ + + + A+KV E M S+G+ PN +T++++I+AC G+ +A +F
Sbjct: 220 VYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIF 279
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EML+ G +P+ N LL C ++ A LF + + Y+ D +
Sbjct: 280 DEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDI-FTYNTLLDAVCK 338
Query: 482 MEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
D Q ++ P R P TY+ ++ +AL N
Sbjct: 339 GGQMDLAFQIMSEMP-------------RKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ + + +S+ L+ G E AL + K M G+ D V Y + +
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ +FEEMK +I PNL+TY TL+ S+ G L+ Q+ + V+++ KAG
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSK-GGLY--QEAMEVFREFKKAG 496
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 53/288 (18%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S ++ + ++A V E L+ G +S+LI+A +G ++A+ +FE M
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 427 AGCEPNSQCCNILLQACVEA-CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+G +PN N ++ AC + F+RA +F
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEML------------------------- 283
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
R +P T+N L+ C + + L +EM G
Sbjct: 284 ----------------------RNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRG 321
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ + ++ L+DA G ++ A QI+ M + P+VV Y+T I ++ RL +A
Sbjct: 322 IEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEAL 381
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+LF EMK I + V+Y TLL S Y L ++ L V ++M +G
Sbjct: 382 NLFNEMKFASIGLDRVSYNTLL---SIYAKLGRFEEALNVCKEMESSG 426
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDG 323
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 35/385 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDM 647
+ +++ Y S + ++ L +Y M
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSM 389
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 24/328 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV ++ +YN LL A G A I+ +K K L+ D+ +Y++++ + +
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIK----KNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A +V M PN +++++LI+A +AG++++A+ L EM + G +P+ +
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 439 LLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
LL AC Q R + RS + VA N+ S + D +
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAY------NSGIKSYLSFGDYEKALEL-- 385
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y+S + + KP TYNIL+ Y +M +S ++
Sbjct: 386 ------YTSM-RESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + G + A M++ G PDV+ YTT I+ K+A+ LF+EM+
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I P+ + +L+ A ++ G V Q +
Sbjct: 499 IPPDAIICSSLMEAFNKGGEPERVLQLM 526
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/441 (19%), Positives = 178/441 (40%), Gaps = 60/441 (13%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ME KD +
Sbjct: 313 VGLLHE-----------------------ME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
MRE + PD V Y I + + ++ FE+M ++ Y +L+ + +
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIK 445
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G L E + + + M K+G
Sbjct: 446 QGKLSEAE---STFSSMKKSG 463
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 165/393 (41%), Gaps = 55/393 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ +I+ I G +AI++ + ++ V NI +NSL+ A + L +
Sbjct: 186 PDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAI 245
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++K G+ D+ SY LL A + A+E++ ++K K K + +Y+ ++
Sbjct: 246 FNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK----KNSCKPNKVSYNALID 301
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA---------------------- 409
+ A + A+ + +M G+ P+ ++ S+L+ AC
Sbjct: 302 AYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Query: 410 -----NAGL--------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N+G+ E+A+ L+ M ++ +P++ NIL+ + ++ + R F
Sbjct: 362 NTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFF 421
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + E Y + I + + K S S +SS K F P
Sbjct: 422 EDMVDSKVS-STKEVY---SSLIYSYIKQGKLS-------EAESTFSSMKKSGCF-PDVL 469
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L++A + R L EM G+ P+ I + L++A G E LQ+++ M
Sbjct: 470 TYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFM 529
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + + +Y I C + K A + E
Sbjct: 530 KKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 562
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGN--------------------TVLAQEIYGEVK 351
Y +M++ V D +YNIL+ G V + IY +K
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIK 445
Query: 352 H------------LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ G DV TY+T+++ + W+ A + ++M G+ P+ I
Sbjct: 446 QGKLSEAESTFSSMKKSGCFP-DVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAI 504
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
SSL+ A G E+ + L E M + N + ++ +C + A +
Sbjct: 505 ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYL 564
Query: 460 TLSKTQVALG 469
S + +++G
Sbjct: 565 DSSLSSISVG 574
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 161/374 (43%), Gaps = 52/374 (13%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+Y + AI+E++ + N + FN L+ A + + ++ M++ D+ ++
Sbjct: 134 NYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFL 193
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C AG A E++ E + A G + D ++ +V+ AK + A +V
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHE---MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G P+ I ++++I+ A AG ++A+ + + ML C P IL+ + +A
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDK 507
+RA LFR S F PNS Y+S
Sbjct: 311 LERAEELFRVMAAS--------------------------------GFRPNSVIYTSLIH 338
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+ + MK C+ L +EM G P+ I+ T++ID SGN E A
Sbjct: 339 GFA-------KSGRMKEACS-------LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + M G P+VV YTT I+ + R+ AF + + M + P+ VTYI LL
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 628 RSRYGSLHEVQQCL 641
+ G L E Q L
Sbjct: 445 FCKLGRLDEAAQLL 458
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 192/447 (42%), Gaps = 51/447 (11%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F + R A+ ++ K+ P+++ ++D G K+ ++ ++ +
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219
Query: 287 VTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ M + A +K EV+ M+K G D +YN ++ AG+ A
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH---A 276
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
QE + ++ AK + +V TY +V A + A ++ M ++G PN++ ++S
Sbjct: 277 QEALKVLDNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---- 459
LI+ A +G +++A LF+EM++AG P+ +++ ++ F++A + F
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 460 ----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
++ T + G G R++N K I + P+S
Sbjct: 396 CKPNVVTYTTIIQGLSKIG---RVANAFRIMKGMIAH--GCFPDSVTYICLLDGFCKLGR 450
Query: 505 FDK---------RFSFKPTTTTYNILMKACCTDYYRVKALMNEM------RTVGLSPNHI 549
D+ + S P Y+ L+K C D V+ ++++ L P +
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLC-DGGSVENTLDDLFEQSKAAAENLDPG-L 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQAFSLFE 607
+I++ C +G ++ A +I + M +G PD Y I RS+ R+++AF+L
Sbjct: 509 CCSIIVGLCK-TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSL 634
+++ P+ VTY L + G +
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEV 594
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 178/441 (40%), Gaps = 36/441 (8%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
VP L VR K + + A + +K P+ T+ID G ++
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +++ ++ + L+N A L+ E+++ M G + Y L+
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+G A ++ E+ +EA + DV T++ ++ + ++ A K E+M+ G
Sbjct: 340 FAKSGRMKEACSLFDEM--VEAG--YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN +T++++I + G V A + + M+ GC P+S LL + + D A
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 454 RLF-------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-------- 498
+L S L + DG + + ++ +QS N P
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE-NTLDDLFEQSKAAAENLDPGLCCSIIV 514
Query: 499 --------NSHYSSFDKRFS--FKPTTTTYNILMKACCTD----YYRVKALMNEMRTVGL 544
+ F + S KP TTYNIL+ C R AL++++ VG
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++T L G V+ A+++L+ G + DVVAYT ++ +A S
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634
Query: 605 LFEEMKHYQIQPNLVTYITLL 625
LF+EM P+ Y ++
Sbjct: 635 LFQEMVRQGGAPDAAAYCCII 655
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ ++++++ Q + + ++N + L+ + + M G
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKP 681
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A+Y L++A C AGN E + + + A+G L V Y ++ F A A
Sbjct: 682 TVATYTALVQALCHAGNV---DEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
LK+ EDM+S G P +T +SL + +G E+A L +EM G P++
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 117/339 (34%), Gaps = 61/339 (17%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
R + E + T NI + N L + ++ + +++ +G + D +Y L C
Sbjct: 531 RMVSEGCKPDATTYNILI-NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589
Query: 336 LAGNTVLAQEIYGEVKHLE---AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G E+ VK LE ++G DV Y+ + A+ + ++M+
Sbjct: 590 KIG------EVDRAVKMLEEASSRG-WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ + +IN +E A F+EM+ G +P L+QA A D A
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F F +A GE
Sbjct: 703 FHRFEG------MLARGE----------------------------------------LV 716
Query: 513 PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ Y+ L+ C +V A L +M + G P ++ L D SG E A +
Sbjct: 717 GSVMIYDALIHGFCK-ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+L+ M G P +T + +S + L +E
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 93/255 (36%), Gaps = 50/255 (19%)
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG + T++ L+N Q + EEML+AG PN+ NIL+++ + D
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F KR
Sbjct: 173 AVTCFEIM-----------------------------------------------KRKRC 185
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
KP T+ IL+ C KA + +EM +G + P+ T ++ + V+ A
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M + G PD +AY T I ++ ++A + + M P VTY L+ +
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 629 SRYGSLHEVQQCLAV 643
+ G+L ++ V
Sbjct: 306 CKAGTLERAEELFRV 320
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 173/387 (44%), Gaps = 56/387 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ ++L LR D S N T+I CG ++ + ++RS+ + N++
Sbjct: 172 RAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVH 231
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+++LMNV ++L L+VY+ M G ++ +YN L+ + G T +E +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLID---VYGKTGAWEEAIRVL 288
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
LE +G+ ++ TY+T++ + Q AL++ E ML+AG P T+++LI+A
Sbjct: 289 DALERQGI-DPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGK 347
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +++A+ +F++M++ GCE N + L+ AC +A +++ A LFR
Sbjct: 348 NGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREM----------- 396
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
H + +P TYN L+ AC
Sbjct: 397 -------------HTE-----------------------GCRPNVVTYNSLIAACAQGAQ 420
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + + + +M+ G P+ +++ LI A +G+ AL + M+ PD V Y T
Sbjct: 421 WEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNT 480
Query: 589 AIKVCVRSKRL-KQAFSLFEEMKHYQI 614
+ ++ + Q F+ +H+++
Sbjct: 481 IVGALWKTGLVWAQIFTPPCRQEHFRL 507
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 161/373 (43%), Gaps = 61/373 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--------HDLKFTLEVYKNMQKLGVM 321
G +++ +++ LR + + ++Y + M L+ LE+ M+ G+
Sbjct: 168 GHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQ 227
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+ L+ C LA ++Y + + A+G ++ TY+T++ V+ W+
Sbjct: 228 CNVHTYSALMNVCIKGNELDLALDVY---RQMLAEGCTP-NLVTYNTLIDVYGKTGAWEE 283
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A++V + + G+ P T++++I AC +G ++A+ ++E ML AG +P + L+
Sbjct: 284 AIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALIS 343
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + + +L R+ + + V G + +
Sbjct: 344 A------YGKNGQLDRALQIFQDMVRRGCERN---------------------------- 369
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
TY+ L+ AC + L EM T G PN +++ LI AC
Sbjct: 370 -------------VITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACA 416
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
E A ++ + M+ G PD V + I R+ ++A + FE+MK + +P+ V
Sbjct: 417 QGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSV 476
Query: 620 TYITLLRARSRYG 632
Y T++ A + G
Sbjct: 477 VYNTIVGALWKTG 489
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 22/317 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK--LDVFTYSTIVKVFADAKWWQ 380
D + LLK +G+ AQE++ ++ L+ L + TY+T++ + +
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M S G+ N T+S+L+N C ++ A+ ++ +ML GC PN N L+
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLI 272
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPN 499
+ ++ A R+ + + Q E NT I+ NM + ++++
Sbjct: 273 DVYGKTGAWEEAIRVLDAL---ERQGIDPEIRTYNTVIIACNMSGQAQEAL--------- 320
Query: 500 SHYSSFDKRFSF--KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
+++ + +PT TTY L+ A + +AL +M G N I+++ LI
Sbjct: 321 ---RIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLI 377
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
AC +G E AL++ + M +G P+VV Y + I C + + ++A +FE+M+H +
Sbjct: 378 SACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCK 437
Query: 616 PNLVTYITLLRARSRYG 632
P+ VT+ L+ A R G
Sbjct: 438 PDAVTFGGLIAAYDRAG 454
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +GK A+R DA ++ P + T+I C + G ++ IYE
Sbjct: 266 VTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYER 325
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +L++ + L L+++++M + G ++ +Y+ L+ AC AG
Sbjct: 326 MLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGR 385
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA E++ E+ H E + +V TY++++ A W+ A ++ E M G P+ +
Sbjct: 386 WELALELFREM-HTEG---CRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAV 441
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
T+ LI A AG +A+ FE+M C P+S N ++ A
Sbjct: 442 TFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGA 484
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 517 TYNILMKAC--------CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TY+ LM C D YR +M G +PN +++ LID G +G E A+
Sbjct: 232 TYSALMNVCIKGNELDLALDVYR------QMLAEGCTPNLVTYNTLIDVYGKTGAWEEAI 285
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L + G+ P++ Y T I C S + ++A ++E M QP TY L+ A
Sbjct: 286 RVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISA- 344
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
YG ++ + L ++QDM + G
Sbjct: 345 --YGKNGQLDRALQIFQDMVRRG 365
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 515 TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TY ++ C T R L+ EMR+ G+ N +++ L++ C ++ AL + +
Sbjct: 195 TMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYR 254
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G +P++V Y T I V ++ ++A + + ++ I P + TY T++ A + G
Sbjct: 255 QMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSG 314
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ Q+ L +Y+ M AG
Sbjct: 315 ---QAQEALRIYERMLAAG 330
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T +I CG + AL+++ MR G+ +V Y+ + VC++ L A ++
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+M PNLVTY TL+ + G+ E
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEA 284
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 27/442 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + L ++Q+M +G
Sbjct: 628 KVGN---INGALDIFQEMISSG 646
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 71/436 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQ 639
++ + L E Q
Sbjct: 552 MIDGLCKQSRLDEATQ 567
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 165/378 (43%), Gaps = 13/378 (3%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I Y R P T TY+ ++ C +A + + M + SPN
Sbjct: 522 INEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T LI+ +G V+ L++ M G+ + + Y T I + + A +F+
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 608 EMKHYQIQPNLVTYITLL 625
EM + P+ +T +L
Sbjct: 641 EMISSGVYPDTITIRNML 658
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 25/275 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 475 --NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S + K + + +PN Y+ ++ + C D +
Sbjct: 230 CKKGDTVSALNLLRK--MEEVSHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
V+ + +A L++EM I PN +TY +++
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T+ LM C + V+A L++ M GL P I++ ++D G+ AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 570 ILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ M E + P+VV Y+ I + R A +LF EM+ I P+L TY +++
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 629 SRYGSLHEVQQCL 641
G + +Q L
Sbjct: 301 CSSGRWSDAEQLL 313
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 52/250 (20%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I + GD + + +++ S + +I ++L++ + LK LE++K MQK
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 319 -----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYS 550
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ----------- 416
+++ A ++ + M S +PN +T+++LIN AG V+
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 417 ------------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A+ +F+EM+ +G P++ +L + RA
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 453 FRLFRSWTLS 462
+ +S
Sbjct: 671 VAMLEKLQMS 680
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ IL+K C+ AL ++ +GL P+ +++ L+ V AL + M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
E P+VV +TT + R R+ +A +L + M +QP +TY T++ + G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+PN+VT+ TL+ R G + E
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVE 202
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 27/442 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + L ++Q+M +G
Sbjct: 628 KVGN---INGALDIFQEMISSG 646
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 71/436 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQ 639
++ + L E Q
Sbjct: 552 MIDGLCKQSRLDEATQ 567
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 165/378 (43%), Gaps = 13/378 (3%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I Y R P T TY+ ++ C +A + + M + SPN
Sbjct: 522 INEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T LI+ +G V+ L++ M G+ + + Y T I + + A +F+
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 608 EMKHYQIQPNLVTYITLL 625
EM + P+ +T +L
Sbjct: 641 EMISSGVYPDTITIRNML 658
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 150/371 (40%), Gaps = 33/371 (8%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTF 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ AL + M PN +T+++L+N G + +A+ L + M++
Sbjct: 153 TTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHK 485
G +P ++ + A L R + Y D + + H
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 486 DKQSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILM 522
D Q++ P+ F NS F R+S P TYN L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + ++ + L +EM G+ PN I+++ +ID ++ A + +M G S
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+++ + T I +KR+ L EM + + TY TL+ G L+
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA--- 449
Query: 641 LAVYQDMWKAG 651
L + Q+M +G
Sbjct: 450 LDLLQEMISSG 460
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 15/272 (5%)
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + K + A+ + DML + P+ + + L+ + + L+++M + +
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NIL++ + A F T ++ L D T + + +D+ S
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKIT----KLGLHPDVVTFTTLLHGLCVEDRVSE-- 167
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
N + F+ + +P T+ LM C + V+A L++ M GL P I+
Sbjct: 168 ----ALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 551 WTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ++D G+ AL +L+ M E + P+VV Y+ I + R A +LF EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I P+L TY +++ G + +Q L
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 52/250 (20%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I + GD + + +++ S + +I ++L++ + LK LE++K MQK
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 319 -----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYS 550
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ----------- 416
+++ A ++ + M S +PN +T+++LIN AG V+
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 417 ------------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A+ +F+EM+ +G P++ +L + RA
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 453 FRLFRSWTLS 462
+ +S
Sbjct: 671 VAMLEKLQMS 680
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 179/433 (41%), Gaps = 55/433 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + +R F K + Y + SP++ + T +D G+ K RA++E+
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++ + ++ L++ V A + T E+Y M+ G + D +YN ++ C +G
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+K + V TY ++V A A + E+ S G+ N +
Sbjct: 496 VNKAYQLLEEMKTMGHHPT----VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+SSLI+ G V++A + EEM+Q G PN N LL V+A + + A F+S
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + TPN + TY
Sbjct: 612 ----------------------------KDLKCTPNQI-------------------TYC 624
Query: 520 ILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ C + + EM+ GL PN I++T +I SGNV A + + R
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS 684
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G PD +Y I+ + R A+ LFEE + + T + LL A + L +
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744
Query: 638 QQCLAVYQDMWKA 650
AV ++ K+
Sbjct: 745 AIVGAVLRETAKS 757
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/494 (19%), Positives = 203/494 (41%), Gaps = 63/494 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D+ + + + K L A+ ++ +++ P Y T+I G G + ++
Sbjct: 162 LVPD-DVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
++ E R++ ++ +N ++ K L +++ M++ M ++ +YNI++
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGM 279
Query: 334 CCLAGNTVLAQEIYGEVKHL-----------------------EAKGVLK--------LD 362
C AGN A ++ +K EA + + D
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
T+ +++ A ++ E ML A PN + ++SLI E +++
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RSWT-LSKTQVALG 469
EM+++GC P+ N + +A + ++ LF RS++ L + V G
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459
Query: 470 ------EDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSFD--KRFSFKPTTTTYN 519
E Y D+ ++ + ++ + + N Y + K PT TY
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519
Query: 520 ILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ +A M E ++ G+ N + ++ LID G G V+ A +++ M +
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++P+V + + V+++ + +A F+ MK + PN +TY L+ + + +
Sbjct: 580 GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCK---VRKF 636
Query: 638 QQCLAVYQDMWKAG 651
+ +Q+M K G
Sbjct: 637 NKAFVFWQEMQKQG 650
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 167/410 (40%), Gaps = 55/410 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC+ + GK+ + A R Y+ PN+ + ++I C +Y+++
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ + N+ M+ A + + +++ ++ G + D SY+IL+ + AG
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG--- 459
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+E Y ++ +G + LD Y+T++ F + A ++ E+M + G P +T+
Sbjct: 460 FARETYELYYAMKDQGCV-LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S+++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV------ 572
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
ME ++ +T P T+N L
Sbjct: 573 --------------------MEEMMQKGLT---------------------PNVYTWNCL 591
Query: 522 MKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ +AL+ M+ + +PN I++ ILI+ A + M++ G+
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGL 651
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
P+ + YT I +S + QA SLFE + P+ +Y ++ S
Sbjct: 652 KPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLS 701
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 157/369 (42%), Gaps = 35/369 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ MQ+LG ++ L++ G A + E+K D+ Y+
Sbjct: 81 LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK----SNTFDADIVLYNV 136
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ F MA K +M + G+ P+ +T++S++ A +++A+ +FE+M Q
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNR 196
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA-------LGEDYDGNTDR 478
P + N ++ A +FD A+ L R+ + VA LG+ G TD+
Sbjct: 197 QVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGK--KGKTDK 254
Query: 479 -ISNMEHKDKQSITNTPNF--------VPNSHYSSFDKRFSFK-----PTTTTYNILMKA 524
+ E + ++ N P + + ++F R + K P T NI++
Sbjct: 255 ALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDR 314
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + M SP+ ++ LID G G V+ A +I + M + P+
Sbjct: 315 LCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPN 374
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
VV YT+ I+ + R + +++EM P+L+ T + + G E ++ A
Sbjct: 375 VVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG---ETEKGRA 431
Query: 643 VYQDMWKAG 651
+++++ G
Sbjct: 432 LFEEIKARG 440
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F F+P + Y L+ A + R+ AL N+M+ +G N T LI G V
Sbjct: 53 RHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRV 112
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + D+V Y I + ++ A+ F EMK + P+ VTY ++
Sbjct: 113 DAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSM 172
Query: 625 LRARSRYGSLHE 636
+ + L E
Sbjct: 173 MGVLCKANRLDE 184
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F PT T L+ +C ++A L+ MR P ++T LI A G +
Sbjct: 21 GFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRM 80
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + M+E G +V TT I+V R R+ A SL +EMK ++V Y +
Sbjct: 81 LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDC 140
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+G + +V + +M G
Sbjct: 141 ---FGKVGKVDMAWKFFHEMKANG 161
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
DY ++ ++ EM G P + + L+ +C S + A +L++MR P AYT
Sbjct: 8 DY--LEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
T I + +LF +M+ + N+ TL+R SR G
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREG 110
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 58/387 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKL 318
+I+ G G Y S + E ++ + V+ NI +N+++N A D + L ++ M+
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 248
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AK 377
GV D+ +YN LL AC G L E K + G++ ++ TYS IV+ F K
Sbjct: 249 GVQPDLVTYNTLLSACAARG---LGDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGK 304
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++A+ +KE M S G P+ +++ LI A A G +++AM +F++M AGC PN+ +
Sbjct: 305 LEKVAMLLKE-MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
ILL + ++D LF ++ K+
Sbjct: 364 ILLNLYGKHGRYDDVRELF-------------------------LQMKES---------- 388
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILI 555
S +P TTYNIL++ Y V L +++ + PN ++ L+
Sbjct: 389 ------------SAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
ACG G E A +IL M G+ P AY+ I+ ++ +A F M +
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
+ TY +L+ +R G E + L+
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILS 523
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D + +L ++K MQ+ + + Y I++ G EI+ E + ++GV++
Sbjct: 127 DWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE---MASQGVIR-S 182
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF+Y+ ++ + ++ +L++ E M V+PN +T++++INACA L E + LF
Sbjct: 183 VFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLF 242
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G +P+ N LL AC D A +F KT + G
Sbjct: 243 AEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF------KTMIEGG------------ 284
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
VP + TT +Y + +V L+ EM +
Sbjct: 285 --------------IVP-------------EITTYSYIVETFGKLGKLEKVAMLLKEMES 317
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ S+ +LI+A G+++ A+ + K M+ G P+ Y+ + + + R
Sbjct: 318 EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDD 377
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
LF +MK +P+ TY L+R G EV
Sbjct: 378 VRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEV 413
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 136/336 (40%), Gaps = 59/336 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++KN L ++++ K G+ + ++ K+++ + K + Y+
Sbjct: 103 LDIFKNRLSLN------DFSLVFKEFAARGDWQRSLRLF---KYMQRQIWCKPNEHIYTI 153
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + + ++ ++M S GV + ++++LINA G E ++ L E M +
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDK 487
PN N ++ AC A G+ D++G + M H+
Sbjct: 214 VSPNILTYNTVINAC-----------------------ARGDLDWEGLLGLFAEMRHEGV 250
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
Q P TYN L+ AC +A M M G+
Sbjct: 251 Q------------------------PDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIV 286
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P +++ +++ G G +E +LK M +G PD+ +Y I+ + +K+A +
Sbjct: 287 PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDV 346
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F++M+ PN TY LL ++G +V++
Sbjct: 347 FKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 382
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
+L + +S + K FA WQ +L++ + M PN ++ +I+ GL+E+
Sbjct: 109 RLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCS 168
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A Q++ + L +R
Sbjct: 169 EIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL--------------------ER 208
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ KR P TYN ++ AC D+ + L
Sbjct: 209 M---------------------------KRERVSPNILTYNTVINACARGDLDWEGLLGL 241
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + K M E G+ P++ Y+ ++ +
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L++ L +EM+ P++ +Y L+ A ++ GS+ E + V++ M AG
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKE---AMDVFKQMQAAG 354
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN ++++ G G Y R ++ ++ + + +N L+ V K + +
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ + +M +Y L+ AC G A++I + H+ KG++ YS +++
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI---LFHMNGKGIVPSSK-AYSGLIE 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + AL M G T++SLI+ A GL ++ + M + G
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N++ + +++ ++ Q++ A + F
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAF 557
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 19/243 (7%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
DV ++ A VP A + + +GK + K+ + P+ +I V
Sbjct: 345 DVFKQMQAAGCVPNAST-YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL--------MNVNAHDLKFTLEVYKNMQK 317
G G + + ++ DL +N+ N+ + L ++ +A + F +M
Sbjct: 404 FGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF------HMNG 457
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ +Y+ L++A G L E + G K + TY++++ FA
Sbjct: 458 KGIVPSSKAYSGLIEAY---GQAALYDEALVAFNTMNEVGS-KSTIDTYNSLIHTFARGG 513
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
++ + M G++ N ++S +I +G E+A+ F EM + CE + Q
Sbjct: 514 LYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLE 573
Query: 438 ILL 440
+L
Sbjct: 574 GVL 576
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 13/237 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PNM ++ CG G + ++ I + + + + ++ L+ + L
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++G + + +YN L+ G L +E + + G+ + + ++S I++
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGG---LYKEFEAILSRMREYGISR-NAKSFSGIIE 542
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + ++ A+K +M + T ++ AGLV+++ F E+ +G P
Sbjct: 543 GYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILP 602
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-----LGEDYDGNTDRISNME 483
+ C ++L + ++D A L + KT+V+ +G+ G+ D SN +
Sbjct: 603 SVLCYCMMLAVYAKNGRWDDASELLDE--MIKTRVSSIHQVIGQMIKGDYDDDSNWQ 657
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 27/442 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + L ++Q+M +G
Sbjct: 628 KVGN---INGALDIFQEMISSG 646
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 71/436 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQ 639
++ + L E Q
Sbjct: 552 MIDGLCKQSRLDEATQ 567
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 165/378 (43%), Gaps = 13/378 (3%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I Y R P T TY+ ++ C +A + + M + SPN
Sbjct: 522 INEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T LI+ +G V+ L++ M G+ + + Y T I + + A +F+
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 608 EMKHYQIQPNLVTYITLL 625
EM + P+ +T +L
Sbjct: 641 EMISSGVYPDTITIRNML 658
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 25/275 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG- 474
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 475 --NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S + K + + +PN Y+ ++ + C D +
Sbjct: 230 CKKGDTVSALNLLRK--MEEVSHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
V+ + +A L++EM I PN +TY +++
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T+ LM C + V+A L++ M GL P I++ ++D G+ AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 570 ILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ M E + P+VV Y+ I + R A +LF EM+ I P+L TY +++
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 629 SRYGSLHEVQQCL 641
G + +Q L
Sbjct: 301 CSSGRWSDAEQLL 313
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 52/250 (20%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I + GD + + +++ S + +I ++L++ + LK LE++K MQK
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 319 -----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYS 550
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ----------- 416
+++ A ++ + M S +PN +T+++LIN AG V+
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 417 ------------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A+ +F+EM+ +G P++ +L + RA
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 453 FRLFRSWTLS 462
+ +S
Sbjct: 671 VAMLEKLQMS 680
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ IL+K C+ AL ++ +GL P+ +++ L+ V AL + M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
E P+VV +TT + R R+ +A +L + M +QP +TY T++ + G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+PN+VT+ TL+ R G + E
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVE 202
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 255/625 (40%), Gaps = 105/625 (16%)
Query: 100 SEGNVSKFASMLSLEMVASGIVKS-----------IREGRIDCVVGVLKKLNELGVAPLE 148
S+ N A +L EM+ G+ + +R G D VL+++ E V P
Sbjct: 412 SKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDN 471
Query: 149 LFDGSGFKLLKNECQR------------LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+ FK +K+E QR L +S + L VL + + K+LD
Sbjct: 472 YTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVE 531
Query: 197 IV---------QLCV--------------------NKPDVNLAIRYACIVPRADILFCNF 227
+ Q+ V N P V + + + P +I F
Sbjct: 532 LFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRP-DEISFNTI 590
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ +++ L A ++ K PN ++ID C C + + +++ N+
Sbjct: 591 IKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNI 650
Query: 288 TLNIYVFNSLMN------------VNAHDLKFTLEVYKNMQKL--GVMADMASYNILLKA 333
+ + +++L+ N DL+ + + M++ GV D YN L+ A
Sbjct: 651 VPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDA 710
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C + A ++ E++ +K TY ++K + A A V + M
Sbjct: 711 CVRFHDVNRAVAVFQEMQF----SNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNC 766
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN++T+ LI+AC +E+AM +FE M + G + N+ L++ ++ + D+A
Sbjct: 767 LIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQAL 826
Query: 454 RLFRSWTLSK----TQVALGEDYD-----GNTDRISNMEHKDKQSITNT-PNFVPNSHYS 503
+++ + V D + + + + KQ I++T P+ + YS
Sbjct: 827 EVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLIT---YS 883
Query: 504 SFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ K F + YN L+ CC AL M +
Sbjct: 884 TMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEIL 943
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P++++++ILI G N+ AL +L+ M++DG+ P ++ YT ++ C++S++LK A
Sbjct: 944 KIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTA 1003
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF +M+ I+ + +TY T++
Sbjct: 1004 EQLFHDMRIQGIRGDQLTYQTMING 1028
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 145/644 (22%), Positives = 271/644 (42%), Gaps = 83/644 (12%)
Query: 52 VHSSQTAL--LSTVRRDLSSRND--YYA---DMASKLAKDGRLEEFAMIVESVVVSEGNV 104
++ +QTAL +++ ++ND YY M L K EE I V +
Sbjct: 301 LNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQIYNKVFTLSKDQ 360
Query: 105 SKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQR 164
M++ + G R R+ + VL + E G+ P E+ + + + C +
Sbjct: 361 PNCMDMMTFSCMIKGYC---RAQRLPQALNVLSIMKERGIKPDEVL----YNSIIDGCSK 413
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
++ + F+ E+L E P ++ CV + + A R + +
Sbjct: 414 --NNQIAKAFLLYDEMLGEGVTPTTITFNS--LIDCCVRSGNQDQAWRVLEQMKEKQVKP 469
Query: 225 CNF--------VREFGKKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGICGDYMKS 275
N+ ++ +++DL A Y+ + +P+ + ++D C C ++
Sbjct: 470 DNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRA 529
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL-------GVMADMASYN 328
+++ L+ Q+ I V N+ N+ L+ + + KN + + D S+N
Sbjct: 530 VELFKQLKPQSQP-QIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFN 588
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++K C LA E++ +K LK + TY++++ A ++ +
Sbjct: 589 TIIKGCAQEKKLQLAFEMFNLMK----MQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSE 644
Query: 389 MLSAGVTPNTITWSSLI----------NACANAGLVEQAMHLFEEMLQA--GCEPNSQCC 436
M + P+ T+S+LI N +N +E+A L E+M Q+ G +P+
Sbjct: 645 MQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILY 704
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSK---TQVALG---EDYDGNTDRISNMEHKDKQSI 490
N L+ ACV +RA +F+ S + V G + Y G+ +++ N K+
Sbjct: 705 NCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAY-GSANQLDNAFFVFKKMK 763
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNH 548
N +PNS TY L+ AC + R + M+ G+ N
Sbjct: 764 DNC--LIPNS---------------VTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNT 806
Query: 549 ISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I +T LI S ++ AL++ +IM+ +D + P+ V + + I C+R +K+A +FE
Sbjct: 807 IIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFE 866
Query: 608 EMKH--YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
EMK +P+L+TY T+++ R + +QQ L + DM K
Sbjct: 867 EMKQPISHTKPDLITYSTMIKGFCREKN---IQQALIMLNDMEK 907
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSRAIYE 280
I+F ++ F K L AL Y K PN ++ID C C K+ I+E
Sbjct: 807 IIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFE 866
Query: 281 DLRS--QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++ + ++ +++++ +++ L + +M+K +MAD YN LL CC
Sbjct: 867 EMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCK 926
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A +A ++Y ++ L+ +K TYS ++K++ + AL V E+M G+ P
Sbjct: 927 ANEIEMALKVYKNMEILK----IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
I ++ L+ C + ++ A LF +M G + ++ C+ + +FD L
Sbjct: 983 GLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILL 1042
Query: 457 RSWTLSKTQVA--LGEDYDGNTDRISNMEHKDKQSIT 491
+ + SK Q+ L ++ ++ + H+ KQ IT
Sbjct: 1043 KDASDSKVQLPHELSQNILTELNKWNTDNHQMKQEIT 1079
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 174/449 (38%), Gaps = 132/449 (29%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
DM +++ ++K C A A + +K +G+ K D Y++I+ + A
Sbjct: 365 DMMTFSCMIKGYCRAQRLPQALNVLSIMKE---RGI-KPDEVLYNSIIDGCSKNNQIAKA 420
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC------- 435
+ ++ML GVTP TIT++SLI+ C +G +QA + E+M + +P++
Sbjct: 421 FLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKG 480
Query: 436 --------------------------------CNILLQACVEACQFDRAFRLFRS---WT 460
N+LL AC+ Q DRA LF+ +
Sbjct: 481 IKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQS 540
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV--PNSHYSSFDK----------- 507
+ QV+ +D D + +S + D S N P V N H+ D+
Sbjct: 541 QPQIQVSNTDDAD---NSLSLEDSPD--SAKNAPAVVNSSNHHFMRPDEISFNTIIKGCA 595
Query: 508 -----RFSF-----------KPTTTTYNILMKAC--CT---------------------- 527
+ +F KP TYN L+ AC C
Sbjct: 596 QEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNF 655
Query: 528 -----------------------DYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSG 562
D + AL+ +M+ G+ P+ I + LIDAC
Sbjct: 656 TYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFH 715
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+V A+ + + M+ + P V Y IK + +L AF +F++MK + PN VTY
Sbjct: 716 DVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYG 775
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A + +++++ + V++ M + G
Sbjct: 776 CLIDACVKN---NQIERAMEVFETMKRDG 801
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 173/373 (46%), Gaps = 35/373 (9%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNM 315
I + G+C G K+ I ED++ + V+ N+ +N+L++ K + K M
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM 227
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ + ++NIL+ C N A +++ E+ +GV K +V TY++++ +
Sbjct: 228 RADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR---QGV-KPNVVTYNSLINGLCN 283
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A +++ M+++ + PN IT ++L+N +V+QA LF++M + G PN
Sbjct: 284 NGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE----DYDGNTDRISNMEHK-DKQSI 490
NIL+ A + + AF L+R + LG+ D I+ + K D ++
Sbjct: 344 YNILIDAYCKDENMEDAFALYR--------IMLGKGVCPDVSTYNCLIAGLCRKGDLEAA 395
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N + + H K TYNIL+ + C KA L++EM GL P+
Sbjct: 396 RNLVSEMDTKH---------LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ +ID GN+ AL + M + G +V Y IK + +L+ A L E
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506
Query: 609 MKHYQIQPNLVTY 621
M + PN +TY
Sbjct: 507 MLEKGLIPNRMTY 519
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 62/353 (17%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D++F VYK M + + + S+NI++ C G A +I ++ ++ +GV +V
Sbjct: 146 DMEF---VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDI---IEDMKVRGV-SANV 198
Query: 364 FTYSTIVKVFAD-AKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TY+T++ + K +M A + ++M + G+ PN +T++ LI+ V AM +
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM + G +PN N L+ + + A L
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL------------------------- 293
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
+ + N+ KP T+N L+ C + +A L ++
Sbjct: 294 ------RDQMVNS----------------CLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G++PN ++ ILIDA N+E A + +IM G+ PDV Y I R
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A +L EM ++ +L+TY L+ + G E+++ L + +M + G
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKG---EMKKALRLLDEMCRKG 441
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 180/394 (45%), Gaps = 55/394 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+YE++ N+ +I FN ++N+ + K+ + +M+ GV ++ +YN ++ C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
L G A +I+ +K LK D +TY++ + + + A V +L +G+
Sbjct: 264 LRGKFEAASKIFKTMKDKN----LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ C N G +++A +EM+ G + N+L+ A L
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA------------L 367
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFD 506
F + + + D I M K + T N N + S FD
Sbjct: 368 FLEKRIEEAE-----------DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 507 KRF--SFKPTTTTYNILMKACCTDYYRVKALMNEMR-------TVGLSPNHISWTILIDA 557
+ + +PT TY L+ D + + M+E G+ P+ I + LID
Sbjct: 417 EMVEKNIRPTVETYTSLI-----DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDG 471
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A Q+LK M + PD V + T ++ R +++++A L +EMK I+P+
Sbjct: 472 HCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++Y TL+ S+ G +++ L V+ +M G
Sbjct: 532 HISYNTLISGYSKRG---DMKDALEVFDEMLSLG 562
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 118 SGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGL 177
S I + +E RI+ GVL KL E G+ P + + L + C + G
Sbjct: 292 SFISRLCKERRIEEASGVLCKLLESGLVP----NAVTYNALIDGC---CNKG-------- 336
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+LD+ F +N+ V Y ++ LF + + D+
Sbjct: 337 ------------DLDKAFAYRDEMMNRGIVASVFTYNLLI---HALFLE--KRIEEAEDM 379
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ +R P++ I+ CG+ K+ ++++++ +N+ + + SL
Sbjct: 380 IKEMREKGV------EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++V + + E +K K G++ D+ +N L+ C+ GN A ++ E+ + A
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN--A 491
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K V D T++T+++ + + + A K+ ++M G+ P+ I++++LI+ + G ++
Sbjct: 492 KVV--PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
A+ +F+EML G +P N L+Q + + D A L R
Sbjct: 550 DALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + FGK+ + A + S K P++ + +ID G C + RA
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALID--GHCVNGNIDRA------ 481
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ K M V+ D ++N L++ C A
Sbjct: 482 -------------------------FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E+K +G+ K D +Y+T++ ++ + AL+V ++MLS G P +T+++
Sbjct: 517 KKLLDEMKE---RGI-KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPN 432
LI + G + A L EM G P+
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPD 601
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D Y++++ + A W+ A+ + EDML A + P T++++INAC AG ++A+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF--------EIMKGANVTSDTFTL 154
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---K 533
+ + H K Q F S ++R P TY +M + C Y +V K
Sbjct: 155 NIIIHCLVKIGQCGEAIELF-----NSMRERRTKCPPDVVTYTSIMHSYCI-YGQVENCK 208
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+ + M G+ PN +++ L+ A G AL I +++++G+ PD+V+YT+ +
Sbjct: 209 AIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY 268
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + ++A +F +MK +PN V+Y L+ A YGS +++ + + +M K G
Sbjct: 269 GRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDA---YGSAGMLKEAVGLLHEMEKDG 323
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 35/385 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + ++NSL++ + A ++ + + ++M + + +YN ++
Sbjct: 29 QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ + + A+ E M
Sbjct: 89 NACGAAGNWKKALEL---CKKMTENGV-GPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS-QCCNILLQAC----V 444
A VT +T T + +I+ G +A+ LF M + C P+ +I+ C V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E C+ F L + + VA R H++ +I N
Sbjct: 205 ENCK--AIFDLMVAEGVKPNIVAYNSLLGAYASR---GMHREALAIFN------------ 247
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
K+ +P +Y L+ A KA + N+M+ PN +S+ LIDA G +G
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A+ +L M +DG+ PDVV+ +T + C R +++ + ++ E + I N V Y
Sbjct: 308 MLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDM 647
+ +++ Y S + ++ L +Y M
Sbjct: 368 SGIKS---YLSFGDYEKALELYTSM 389
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 164/398 (41%), Gaps = 56/398 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P +I+ CG G++ K+ + + + V ++ N +++ N +
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ V +D + NI++ G A E++ ++ K DV TY++I+
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK--CPPDVVTYTSIMH 196
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + + M++ GV PN + ++SL+ A A+ G+ +A+ +F + + G P
Sbjct: 197 SYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRP 256
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A + Q ++A +F
Sbjct: 257 DIVSYTSLLNAYGRSAQPEKAREVFNKM-------------------------------- 284
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
K+ S KP +YN L+ A + +A L++EM G+ P+ +
Sbjct: 285 ---------------KKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S + L+ ACG + IL+ R G+ + VAY + IK + ++A L+ M
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++P+ VTY L+ S+ G E L ++DM
Sbjct: 390 RESNVKPDAVTYNILISGSSKLGKYTE---SLRFFEDM 424
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 160/399 (40%), Gaps = 57/399 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + N + G + AL ++ P++ ++ Y K+
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAI 136
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM--QKLGVMADMASYNILLK 332
+ +E ++ NVT + + N +++ V +E++ +M ++ D+ +Y ++
Sbjct: 137 SYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMH 196
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ C+ G + I+ + A+GV K ++ Y++++ +A + AL + +
Sbjct: 197 SYCIYGQVENCKAIF---DLMVAEGV-KPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ ++++SL+NA + E+A +F +M + C+PN N L+ A A A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ME KD +
Sbjct: 313 VGLLHE-----------------------ME-KD-----------------------GIQ 325
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + + L+ AC C R++ ++ R+ G+ N +++ I + G+ E AL++
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
MRE + PD V Y I + + ++ FE+M
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEV 311
PN+ +++ G + ++ AI+ ++ + +I + SL+N + EV
Sbjct: 221 PNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREV 280
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K + SYN L+ A AG + +E G + +E G+ + DV + ST++
Sbjct: 281 FNKMKKNSCKPNKVSYNALIDAYGSAG---MLKEAVGLLHEMEKDGI-QPDVVSISTLLA 336
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + E S G+ NT+ ++S I + + G E+A+ L+ M ++ +P
Sbjct: 337 ACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKP 396
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
++ NIL+ + ++ + R F SK
Sbjct: 397 DAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C + I E RS+ + LN +NS + ++ D + LE+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV---KHLEAKGVLKLDVFTYST 368
Y +M++ V D +YNIL+ G + + ++ K K L + +
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEFLWTIRWLEES 445
Query: 369 IVKVFAD-AKW---WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ V D +KW W+ A ++ E + S+ + + T + ++N G E M LF +M
Sbjct: 446 LGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKM 505
Query: 425 LQA 427
+ +
Sbjct: 506 VTS 508
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R DI+ + + + +G+ A ++ KK+ PN +ID G G
Sbjct: 255 RPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG------- 307
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
LK + + M+K G+ D+ S + LL AC
Sbjct: 308 --------------------------MLKEAVGLLHEMEKDGIQPDVVSISTLLAAC--- 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I ++ ++G+ L+ Y++ +K + ++ AL++ M + V P+
Sbjct: 339 GRCRQITRIETILEAARSRGI-DLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQA 427
+T++ LI+ + G +++ FE+M+ +
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDS 427
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 180/400 (45%), Gaps = 40/400 (10%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
+ L +PN++ +ID GD ++RA+ +++ + ++ +NSL++ +L+
Sbjct: 187 EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ M+ G D+ +YN L+ C G A + E+K +GV+ +V T+
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKR---EGVMA-NVVTF 302
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ PN +T++ L++ AG ++ A+ L EM+Q
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 427 AGCEPNSQCCNILLQA-CVEA--CQFDRAFRL-----FRSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + FRL R+ L T + G N++R
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSER 422
Query: 479 ISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
++ E KDK + + Y L+ C K+
Sbjct: 423 ALSLLSEMKDK----------------------GMELDVSLYGALIWGLCNLQKLDEAKS 460
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+N+M GL PN++ +T ++DAC + A+ +L+ M + G P++V Y +
Sbjct: 461 LLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ + +A S F +M ++PN+ Y L+ + G L
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 211/494 (42%), Gaps = 29/494 (5%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKP-DVNLAIRYACIVPRADIL 223
L D G ++ V + + E R+P + LC+ + LA R +P ++
Sbjct: 138 LADRGLLDDAVLALARVRELRVPPNT--RTCNHILLCLARERSSELAWRLFEQLPAPNVF 195
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
N + +F K ++ RA A K + SP++ ++ID G CG+ + + ++
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R ++ +N+L+N ++ + M++ GVMA++ +++ + A C G
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +++ +++ KG +K + TY+ +V A AL + +M+ GV N +T
Sbjct: 316 REAMKLFAQMR---MKG-MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ L++ G V +A +F M +AG N L+ +RA L
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ + Y + N++ D+ +S+ N + KP Y
Sbjct: 432 DKGMELDVSL-YGALIWGLCNLQKLDEAKSLLNKMD------------ECGLKPNNVIYT 478
Query: 520 ILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M AC AL+ +M G PN +++ L+D +G+++ A+ M +
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+V AYT + ++ RL +A L +EM + + V +L+ + G+L
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNL--- 595
Query: 638 QQCLAVYQDMWKAG 651
Q A+ M +G
Sbjct: 596 QDAFALKAKMINSG 609
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 163/419 (38%), Gaps = 55/419 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K + A++ + + PN ++D G + + +
Sbjct: 300 VTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNE 359
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V++ M++ G+ A+ Y L+ + N
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K KG ++LDV Y ++ + + A + M G+ PN +
Sbjct: 420 SERALSLLSEMKD---KG-MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNV 475
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++AC A +A+ L ++M+ +G PN L+ +A D A F
Sbjct: 476 IYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF--- 532
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V LG +P Y
Sbjct: 533 ---NKMVDLG-----------------------------------------LEPNVQAYT 548
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + KA L++EM G+S +++ T L+D GN++ A + M
Sbjct: 549 ALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ D+ YT + +++A + EM I P+ V Y L+ + G++ E
Sbjct: 609 GLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEE 667
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN I I+D C ++ A+ + + NI + +L++ A + +
Sbjct: 472 PNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH 531
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG--------------------NTVLAQEIYGEVK 351
+ M LG+ ++ +Y L+ C G N V + G +K
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591
Query: 352 H--------LEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L+AK + L+LD++ Y+ V F + Q A +V +M+ G+TP+ +
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651
Query: 401 WSSLINACANAGLVEQAMHLFEEM 424
++ LIN C G +E+A L EM
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEM 675
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 185/419 (44%), Gaps = 65/419 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ Y +N L++ + A ++ LE+ +M+K G+ DM +Y I+ K L G A+EI
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII 278
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-------------- 393
K L +G LK D+ TY+ ++ + AL+++ D+LS+G
Sbjct: 279 Q--KMLTDEG-LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 394 ---------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ P+ +T+S LI+ G V+QA+ L++EM PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNME-----HK 485
S + +L+ E A F S +S + V L ++ ++E +K
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455
Query: 486 DKQSITNTPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKACCTD- 528
+ TP+ V NS F K +P+ TY LM A C +
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
++ L+ EM + P +++T++I +E ++Q+L+ MR G++PD + Y
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I+ ++K +++AF L ++M + ++P TY L+ RYG + + + L QD
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQD 634
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 146/336 (43%), Gaps = 26/336 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P++ + +ID GD ++ +Y+ LR + +T +I FNSL+ + K +E +
Sbjct: 429 PDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRK-VVEARR 487
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYST 368
++ + G+ +Y L+ A C GN E+ E +K +E V TY+
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT------VVTYTV 541
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K + + ++++ EDM + G+ P+ IT++++I A + +A L ++ML
Sbjct: 542 VIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN 601
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP N+L+ + A R+ S +D + N +++
Sbjct: 602 LEPTPATYNVLIDGLCRYGDVEDADRVLVSL----------QDRNINLTKVAYTTMIKAH 651
Query: 489 SITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
+ + +K F S K + N L K C + K M + G+SP
Sbjct: 652 CVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLIN--EAKYYFCIMLSDGVSP 709
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ + ++++A +G+V ++L +M + G+ D
Sbjct: 710 DQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 186/462 (40%), Gaps = 93/462 (20%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+CG C G+ ++ + DL S LN+ +++ L++ + L++ M+ +
Sbjct: 298 ICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGE----------------VKHLEAKGVL----- 359
D+ +Y+IL+ C G A ++Y E +K L KG+L
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417
Query: 360 ----------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-C 408
+ DV Y+ ++ + + A+++ + + +TP+ +T++SLI C
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
N +VE A L E + G EP++ L+ A E ++ L L + +
Sbjct: 478 KNRKVVE-ARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTV 536
Query: 469 GEDYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
T I + + K ++S+ + + P TYN +++ C
Sbjct: 537 VT----YTVVIKGLCKQRKLEESVQLLEDM----------RAKGLAPDQITYNTIIQCFC 582
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
D + L+++M L P ++ +LID G+VE A ++L +++ ++ V
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642
Query: 585 AYTTAIKV-CVR--SKRLKQAFS-------------------------LFEEMKHY---- 612
AYTT IK CV+ ++R + F L E K+Y
Sbjct: 643 AYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIM 702
Query: 613 ---QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P+ + +L A R G +H V + LAV M K G
Sbjct: 703 LSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAV---MIKFG 741
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 63/260 (24%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ ++++++++ GL + A F ML+ G P++ NIL+ + A + A L
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ME KQ + +P
Sbjct: 243 -----------------------TNDME---KQGL---------------------QPDM 255
Query: 516 TTYNILMKACCTDYYRVKALMNEMRTV--------GLSPNHISWTILIDACGGSGNVEGA 567
TY I+ K + + LM+ R + GL P+ +++T+LI GN+E A
Sbjct: 256 VTYKIVAKG-----FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEA 310
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L++ + + G +V+ Y+ + + ++ +A L EM+ +QP+LVTY L+
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHG 370
Query: 628 RSRYGSLHEVQQCLAVYQDM 647
+ G +VQQ + +Y++M
Sbjct: 371 LCKQG---KVQQAIQLYKEM 387
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 511 FKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P+ ++N +M C D K+ M G+ P+ S+ ILI +G++E
Sbjct: 181 FAPSVVSFNTIMSRYCKLGLADV--AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEE 238
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLL 625
AL++ M + G+ PD+V Y K + A + ++M + ++P+LVTY L+
Sbjct: 239 ALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLI 298
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ +++ L + +D+ +G
Sbjct: 299 CGHCQMGN---IEEALRLRRDLLSSG 321
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 29/311 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY+ ++ A W+ A+ + +DML A + P+ T+++LINAC ++G ++A++
Sbjct: 194 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 253
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------V 466
+ ++M + G P+ NI+L A Q+ + F + + V
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YS----------SFDKRFS--FKP 513
LG++ D ++M+ K + + F H YS +F+ + KP
Sbjct: 314 KLGQNGKA-IDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN L+ A + +A + NE++ G P+ +S+T L++A G SG E A+++
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++MR + P++V+Y I L +A + EM+ +QPN+V+ TLL A R
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRC 492
Query: 632 GSLHEVQQCLA 642
G +++ L+
Sbjct: 493 GQKVKIKSVLS 503
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 169/410 (41%), Gaps = 59/410 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D+ ++++ K+ P++ TII + +CG + + + ++ + NI
Sbjct: 319 GKAIDIFNSMK----EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 292 YVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+ A H + K V+ ++K G D+ SY LL A +G A +++
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF-- 432
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + K ++ +Y+ ++ + A+++ +M GV PN ++ +L+ AC
Sbjct: 433 --ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACG 490
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + + G + N+ N + + + ++D+A L+R+ K
Sbjct: 491 RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV----- 545
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
KP TYN+L+ CC +
Sbjct: 546 ------------------------------------------KPDPVTYNVLISGCCKMS 563
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y ++EM + + + ++ +I A G V A + M+ G PDV+ YT
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
I ++ ++A +LF EM+ +QP+ + +L+RA ++ G +V
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV 673
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ G A +I+ +K E + DV T++TI+
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMK--EKRSECYPDVVTFTTIIH 347
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + ML+ G+ PN +++++LI A A+ G+ ++A +F E+ + G P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A ++ + ++A ++F
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFE---------------------------------- 433
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+R KP +YN L+ A + +A +++EM G+ PN +
Sbjct: 434 -------------LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + AY +AI + +A SL+ M
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Query: 610 KHYQIQPNLVTYITLLRA---RSRYG 632
+ +++P+ VTY L+ S+YG
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYG 566
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 153/397 (38%), Gaps = 82/397 (20%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G K L A+ +++ PN+ T++ CG CG +K +++ +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 287 VTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------- 335
+ LN +NS ++V +D +L Y+ M+ V D +YN+L+ CC
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567
Query: 336 --------LAGNTVLAQEIYGEV--------KHLEAKGVL--------KLDVFTYSTIVK 371
+ L++E+Y V + EA+ + + DV TY+ ++
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A+ W+ A + +M + V P++I SSL+ A G + + L E M +
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ ++ AC ++ L + S + V++G
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG---------------------- 725
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ F + +MK +Y++ A G N ++
Sbjct: 726 ------------LLNQLLHFLGKSGKIETMMKL----FYKIVA-------SGAEINFYTY 762
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+IL+ +GN +++L+ M E G+ P V Y +
Sbjct: 763 SILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS 799
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID----------------- 264
+ + + + +GK A++ ++ +++ PN+ +ID
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 265 ------------------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNA 302
CG CG +K +++ + + LN +N S ++V
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D +L Y+ M+ V D +YN+L+ CC A E+ L+ + L
Sbjct: 530 YDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLK----IPLS 583
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
YS+++ ++ A + M G P+ IT++++I+A A E+A LF
Sbjct: 584 KEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQ 448
EM +P+S C+ L++A + Q
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L EM+ P+ ++ LI+A G +G A+ I+ M + P Y I
Sbjct: 180 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 239
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
C S K+A ++ ++M + P+LVT+ +L A R
Sbjct: 240 NACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKR 279
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 27/442 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKK--HLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
I + V KK D VSAL ++ H+ PN+ I IID G + ++ ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +++ +NS++ +++ ++ + M + + D+ +YN L+ A
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+E+Y E + +G++ + TYS+++ F A + M + G +PN
Sbjct: 339 GKFFEAEELYDE---MLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++LI+ A ++ M L EM + G ++ N L+ + A L +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--- 511
S L V DG D N + KD + V D F
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCD---NGKLKDALEMFK----VMQKSKKDLDASHPFNGV 507
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYNIL+ + + + L EM G+ P+ I+++ +ID ++ A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M SP+VV +TT I ++ R+ LF EM I N +TYITL+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + L ++Q+M +G
Sbjct: 628 KVGN---INGALDIFQEMISSG 646
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 71/436 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSALNLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQ 639
++ + L E Q
Sbjct: 552 MIDGLCKQSRLDEATQ 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 165/378 (43%), Gaps = 13/378 (3%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G +
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I Y R P T TY+ ++ C +A + + M + SPN
Sbjct: 522 INEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++T LI+ +G V+ L++ M G+ + + Y T I + + A +F+
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 608 EMKHYQIQPNLVTYITLL 625
EM + P+ +T +L
Sbjct: 641 EMISSGVYPDTITIRNML 658
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 149/371 (40%), Gaps = 33/371 (8%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ +Y+ M++ + D+ S+NIL+K C A +G++ L L DV T+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG----LHPDVVTF 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ AL M PN +T+++L+N G + +A+ L + M++
Sbjct: 153 TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHK 485
G +P ++ + A L R + Y D + + H
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 486 DKQSITNT-------PN-FVPNSHYSSF--DKRFS-------------FKPTTTTYNILM 522
D Q++ P+ F NS F R+S P TYN L+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + ++ + L +EM G+ PN I+++ +ID ++ A + +M G S
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+++ + T I +KR+ L EM + + TY TL+ G L+
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA--- 449
Query: 641 LAVYQDMWKAG 651
L + Q+M +G
Sbjct: 450 LDLLQEMISSG 460
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 19/274 (6%)
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F + K + A+ + DML + P+ + + L+ + + L+++M + +
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NIL++ + A F T ++ L D T + + +D+ ++
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKIT----KLGLHPDVVTFTTLLHGLCVEDR--VSE 167
Query: 493 TPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+F F + F + +P T+ LM C + V+A L++ M GL P
Sbjct: 168 ALDF--------FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 549 ISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ ++D G+ AL +L+ M E + P+VV Y+ I + R A +LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM+ I P+L TY +++ G + +Q L
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 52/250 (20%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T+I + GD + + +++ S + +I ++L++ + LK LE++K MQK
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 319 -----------GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYS 550
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ----------- 416
+++ A ++ + M S +PN +T+++LIN AG V+
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 417 ------------------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A+ +F+EM+ +G P++ +L + RA
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 453 FRLFRSWTLS 462
+ +S
Sbjct: 671 VAMLEKLQMS 680
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 179/436 (41%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++S+ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV ++ KA
Sbjct: 849 EQAAIVGAVLRETGKA 864
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/527 (20%), Positives = 220/527 (41%), Gaps = 56/527 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
++ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
I + RL +A+ LFEE K +I+ N+V Y +L+ + G + E
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 174/401 (43%), Gaps = 35/401 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+++ ++ N+ +N L+++ A L E+ +MQK G+ ++ + NI++ C
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ A I+ ++ + V D T+ +++ A K+ E ML +
Sbjct: 424 KSQKLDEACAIFEQMDY----KVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N+I ++SLI N G E ++++M+ C P+ Q N + +A + ++ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV------ 497
F RS+++ + + + +M+ + T N V
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 498 ---PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHIS 550
N Y + K F+PT TY ++ +A M E ++ + N +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G G ++ A IL+ + + G++P+V + + + V+++ + +A F+ MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN VTY L+ + + + + +Q+M K G
Sbjct: 720 ELKCTPNQVTYGILINGLCK---VRKFNKAFVFWQEMQKQG 757
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNVYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 142/351 (40%), Gaps = 61/351 (17%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALRVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++L +A ++FE+M + P+ +T+ +L+ + G V +Y+ M
Sbjct: 426 QKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKIYEKM 473
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ +CV+A + F + ++ K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 29/311 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY+ ++ A W+ A+ + +DML A + P+ T+++LINAC ++G ++A++
Sbjct: 194 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 253
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------V 466
+ ++M + G P+ NI+L A Q+ + F + + V
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YS----------SFDKRFS--FKP 513
LG++ D ++M+ K + + F H YS +F+ + KP
Sbjct: 314 KLGQNGKA-IDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN L+ A + +A + NE++ G P+ +S+T L++A G SG E A+++
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++MR + P++V+Y I L +A + EM+ +QPN+V+ TLL A R
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRC 492
Query: 632 GSLHEVQQCLA 642
G +++ L+
Sbjct: 493 GQKVKIKSVLS 503
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 169/410 (41%), Gaps = 59/410 (14%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D+ ++++ K+ P++ TII + +CG + + + ++ + NI
Sbjct: 319 GKAIDIFNSMK----EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 292 YVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+ A H + K V+ ++K G D+ SY LL A +G A +++
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF-- 432
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + K ++ +Y+ ++ + A+++ +M GV PN ++ +L+ AC
Sbjct: 433 --ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACG 490
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + + G + N+ N + + + ++D+A L+R+ K
Sbjct: 491 RCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV----- 545
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
KP TYN+L+ CC +
Sbjct: 546 ------------------------------------------KPDPVTYNVLISGCCKMS 563
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y ++EM + + + ++ +I A G V A + M+ G PDV+ YT
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
I ++ ++A +LF EM+ +QP+ + +L+RA ++ G +V
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV 673
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ G A +I+ +K E + DV T++TI+
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMK--EKRSECYPDVVTFTTIIH 347
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + ML+ G+ PN +++++LI A A+ G+ ++A +F E+ + G P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ LL A ++ + ++A ++F
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFE---------------------------------- 433
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+R KP +YN L+ A + +A +++EM G+ PN +
Sbjct: 434 -------------LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + AY +AI + +A SL+ M
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Query: 610 KHYQIQPNLVTYITLLRA---RSRYG 632
+ +++P+ VTY L+ S+YG
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYG 566
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 153/397 (38%), Gaps = 82/397 (20%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ +G K L A+ +++ PN+ T++ CG CG +K +++ +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 287 VTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------- 335
+ LN +NS ++V +D +L Y+ M+ V D +YN+L+ CC
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567
Query: 336 --------LAGNTVLAQEIYGEV--------KHLEAKGVL--------KLDVFTYSTIVK 371
+ L++E+Y V + EA+ + + DV TY+ ++
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A+ W+ A + +M + V P++I SSL+ A G + + L E M +
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ ++ AC ++ L + S + V++G
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIG---------------------- 725
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
++ F + +MK +Y++ A G N ++
Sbjct: 726 ------------LLNQLLHFLGKSGKIETMMKL----FYKIVA-------SGAEINFYTY 762
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+IL+ +GN +++L+ M E G+ P V Y +
Sbjct: 763 SILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS 799
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID----------------- 264
+ + + + +GK A++ ++ +++ PN+ +ID
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 265 ------------------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNA 302
CG CG +K +++ + + LN +N S ++V
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D +L Y+ M+ V D +YN+L+ CC A E+ L+ + L
Sbjct: 530 YDKALSL--YRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLK----IPLS 583
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
YS+++ ++ A + M G P+ IT++++I+A A E+A LF
Sbjct: 584 KEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQ 448
EM +P+S C+ L++A + Q
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQ 669
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L EM+ P+ ++ LI+A G +G A+ I+ M + P Y I
Sbjct: 180 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 239
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
C S K+A ++ ++M + P+LVT+ +L A R
Sbjct: 240 NACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKR 279
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 221/517 (42%), Gaps = 39/517 (7%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
I G+ID V + + L LG+ P + G K L C++ G E V + +EE
Sbjct: 203 IEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKAL---CRK----GNFEEAVDVFREMEE 255
Query: 184 FRLPVKELDEEFRIVQLCVNK-PDVNL-AIR--YACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC +K D+ A+R A P + +R F + L
Sbjct: 256 AGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKE 315
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + +P+ YI +I G+ +++ A++ D+ S + N + +S++
Sbjct: 316 AEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQ 375
Query: 300 VNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
++ EV +K + G+ D YNI++ A C G A E+ E+K
Sbjct: 376 CLC-EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRR-- 432
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ LDV Y+T++ + A + E+M G+ P+ +T++ L+ + GL ++
Sbjct: 433 --MSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L + + G +PNS N +++ A + A L+ + E+Y
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-----EAFLNTLEDKCLENYSAMV 545
Query: 477 DRISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCT-DYYRVK 533
D NF ++ +S K+ + + +L C +Y +
Sbjct: 546 DGYCK------------ANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKAL 593
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ M + + PN I + LI A G+++ A + ++ E G++PDV+ YT I
Sbjct: 594 ILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGY 653
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
R L++A +F +MK I+P+++TY +L S+
Sbjct: 654 CRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 690
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
MA+ + + G+ PN T+ I A G E+A+ +F EM +AG PN+ C+ +
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269
Query: 441 QACVEACQFDRAFRLFRS-----W---TLSKTQVALGEDYDGNTDRISNMEHKDKQSI-- 490
+ + D + R+ W T + T V G S M+ K+ + +
Sbjct: 270 EGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRG--------FCSEMKLKEAEDVFI 321
Query: 491 ------TNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL----MKACCTDYYRVKALMNEM- 539
++ + ++ K + +N + +K C + + EM
Sbjct: 322 DMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMG 381
Query: 540 ------------RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R G+ + + + I++DA G VE A+++L M+ MS DVV YT
Sbjct: 382 MASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYT 441
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
T I +L A ++FEEMK I+P++VTY L+ SR G E + L
Sbjct: 442 TLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 495
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 88/390 (22%)
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N LMN + + + +Y+++++LG+ + +Y I +KA C GN A +++ E++
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEE 255
Query: 353 --------------------------LEAKGVLK-----LDVFTYSTIVKVFADAKWWQM 381
EA L+ +D F Y+ +++ F +
Sbjct: 256 AGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKE 315
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V DM++ G+ P+ + +LI+A AG + QA+ L +M+ G + N + +LQ
Sbjct: 316 AEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQ 375
Query: 442 ACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
E A + F+ FR + +V
Sbjct: 376 CLCEMGMASEVVDQFKEFRDSGIFLDEV-------------------------------- 403
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
YNI++ A C L+NEM+ +S + + +T LI
Sbjct: 404 ------------------LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIA 445
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + A + + M+E G+ PD+V Y + R+ K+A L + + ++P
Sbjct: 446 GYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKP 505
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
N T+ ++ G + E + L +D
Sbjct: 506 NSATHNRIIEGLCMAGKVKEAEAFLNTLED 535
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 159/373 (42%), Gaps = 38/373 (10%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G C G + ++ ++E+++ + + +I +N L+ + + K LE+ + G+
Sbjct: 444 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 503
Query: 321 MADMASYNILLKACCLAG---------NTV-------------------LAQEIYGEVKH 352
+ A++N +++ C+AG NT+ ++ Y
Sbjct: 504 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSR 563
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L +G+L + + + + ++ AL + E ML+ V PN I + LI A G
Sbjct: 564 LSKQGILVKKKSCFKLLSSLCMEGEY-DKALILLERMLALDVEPNQIMYGKLIGAFCRDG 622
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEAC--QFDRAFRLFRSWTLSKTQVALG 469
+++A +F+ +++ G P+ +++ C C + F + + +
Sbjct: 623 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
DG++ M + S + + S + S K KP Y +L+ + C
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
A L +EM GL P+ +++T L+ +C G+++ A+ ++ M G+ PD A +
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802
Query: 588 TAIKVCVRSKRLK 600
+ +++++++
Sbjct: 803 VLHRGILKARKVQ 815
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I GD +++ +++ L + +T ++ + ++N + L+ ++
Sbjct: 606 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 665
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEVKHLEAK 356
+ +M++ G+ D+ +Y ++L + A + E+K +
Sbjct: 666 FNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMG-- 723
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+K DV Y+ ++ Q A+ + ++M++ G+ P+ +T+++L+++C + G +++
Sbjct: 724 --IKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDR 781
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
A+ L EM G EP+S+ ++L + ++A
Sbjct: 782 AITLVNEMSFKGIEPDSRAMSVLHRGILKA 811
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 52/250 (20%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+ A G+ ++A+ + + G P+ CN L+ +E + D A ++R
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL---- 218
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
KR P TY I +K
Sbjct: 219 -------------------------------------------KRLGLNPNDYTYGIFIK 235
Query: 524 ACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A C ++ + EM G++PN ++ + I+ + + L+ +R
Sbjct: 236 ALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI 295
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D AYT I+ +LK+A +F +M + I P+ Y L+ A + G+L Q +
Sbjct: 296 DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNL---LQAV 352
Query: 642 AVYQDMWKAG 651
A++ DM G
Sbjct: 353 ALHNDMVSNG 362
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 193/483 (39%), Gaps = 93/483 (19%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ R ++ C G + + I + ++ N +FNSL++ + D + ++
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364
Query: 312 YKNMQKLGVMADMASYNILLKACC----LAGNTVL--AQEIYGEVKHLE----------- 354
+K M K G YNI + + C L G+ +L A++ Y E+ L
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 355 ---------------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+KG + D TYS ++ DA + A + E+M G
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDS-TYSKVIGFLCDASKVEKAFLLFEEMKKNG 483
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++ LI++ AGL++QA + F+EML+ C PN L+ A ++A + A
Sbjct: 484 IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDAN 543
Query: 454 RLFRSWTL--SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+LF L SK V G G D+ + + + I ++ Y
Sbjct: 544 KLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESS----DIDMYFKL 599
Query: 506 DKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
D P TY L+ C L++ M G PN I + LID +G
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL------------------------ 599
+E A ++ M E G P++ Y++ I + KRL
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719
Query: 600 -----------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++A+ L +M+ PN++TY ++ +G + +++QCL +Y+DM
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDG---FGKIGKIEQCLELYRDMC 776
Query: 649 KAG 651
G
Sbjct: 777 SKG 779
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 40/386 (10%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+ V A L V++ M G D + + C AG G+
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRC-------GDA 259
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L K D Y+ +V +A +Q A+ + + M S PN +T+ L++ C
Sbjct: 260 LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLG 319
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
G + + + M+ GC PN + N L+ A ++ + A++LF+ Q
Sbjct: 320 KGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLL 379
Query: 466 -------VALGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYS-------SFDKRF- 509
+ E+ G + ++ + + + N V S+++ FDK F
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFE 439
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P +TY+ ++ C KA L EM+ G+ P+ ++TILID+
Sbjct: 440 IICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A M D +P+VV YT+ I ++++++ A LFE M +PN+V
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV 559
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQ 645
TY L+ + G + + Q A Q
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 188/441 (42%), Gaps = 42/441 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE- 280
+ + + + + K R + A + ++ S PN+ +ID G K+ IY
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Query: 281 ---DLRSQNV------------TLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
D+ S ++ T NI + +L++ A+ ++ E+ M G +
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPN 643
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQE++ VK E +G +++TYS+++ K + L
Sbjct: 644 QIVYDALIDGFCKTGKLENAQEVF--VKMSE-RGYCP-NLYTYSSLINSLFKEKRLDLVL 699
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML TPN + ++ +I+ G E+A L +M + GC PN I A
Sbjct: 700 KVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV----ITYTAM 755
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ F + ++ + L + + G + T R+ + H + + + + +
Sbjct: 756 IDG--FGKIGKIEQCLELYRDMCSKGCAPNFITYRVL-INHCCSTGLLDEAHRLLDEMKQ 812
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
++ R ++Y +++ ++ L++E+ P + ILID +G
Sbjct: 813 TYWPRH-----ISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGR 867
Query: 564 VEGALQILKIMREDGMSPDVVA-----YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+EGAL +L+ E SP + YT+ I+ + ++ +AF L+ M + + P L
Sbjct: 868 LEGALNLLE---EISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPEL 924
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
T++ L++ +R G E Q
Sbjct: 925 STFVHLIKGLTRVGKWQEALQ 945
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 139/354 (39%), Gaps = 60/354 (16%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L++ CC G +A E G +K K TY+ +++VF A A V
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKA----SPTTYNALIQVFLRADKLDTAFLVHR 229
Query: 388 DMLSAG--------------------------------VTPNTITWSSLINACANAGLVE 415
+M ++G P+T+ ++ +++ A L +
Sbjct: 230 EMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQ 289
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM + + M C PN ILL C+ Q R R+ + + E N
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRIL--------SMMMTEGCYPN 341
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTD----- 528
+ +++ H +S + Y F K + +P YNI + + C++
Sbjct: 342 REMFNSLVHAYCKSRDYS------YAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPG 395
Query: 529 ---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +EM +G+ N ++ + G+G + A +I+ M G PD
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y+ I + ++++AF LFEEMK I P++ TY L+ + + G + + +
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARN 509
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 157/360 (43%), Gaps = 55/360 (15%)
Query: 290 NIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++Y + ++ M + D+ +++ K M+ + ++ +Y L+ C GN LA + Y
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
H+ G +V TY+T++ V+ W+ +KV M + GV P T+++LI A
Sbjct: 269 ---NHMRQDGACP-NVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIA 324
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C G +AM +++ ML G PN+ N L+ A +A Q D+ +F+
Sbjct: 325 CNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQ---------- 374
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
M HK + + TY+ L+ AC
Sbjct: 375 -------------EMVHKGCER------------------------SVITYSSLISACEK 397
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ L NEM G PN +++ LI AC E A ++ + M++ G +PDVV
Sbjct: 398 AGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVT 457
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+T I + + ++A +E+M+ + +P+ + + ++ G + ++ LA++Q
Sbjct: 458 FTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQ 517
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 8/227 (3%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM- 298
AL Y+ ++ + PN+ T+IDV G G + + + ++++ V + +N+L+
Sbjct: 264 ALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLII 323
Query: 299 --NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N+ + + VYK M G + +YN L+ A AG E++ E+ H K
Sbjct: 324 ACNMCGQP-REAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVH---K 379
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + V TYS+++ A W++AL++ +M G PNT+T++SLI ACA E+
Sbjct: 380 GCER-SVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEK 438
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
A +FE+M + GC P+ L+ + + Q+ RA + L +
Sbjct: 439 ASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQR 485
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 178/405 (43%), Gaps = 61/405 (15%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
++ LR DA+ S ++Y +I +C D ++ + +++R +N+ N++ +
Sbjct: 190 EIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYT 249
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+LMNV + L+ Y +M++ G ++ +YN L+ + G L ++ + +
Sbjct: 250 ALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLID---VYGKMGLWEQGIKVLTLM 306
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ +GV + + TY+T++ + A+ V + ML G +PN T+++LI+A AG
Sbjct: 307 KTEGVEPV-LRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQ 365
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++ M +F+EM+ GCE + + L+ AC +A Q++ A LF GE
Sbjct: 366 LDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMA--------GE--- 414
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYR 531
+PN T TYN L+ AC + +
Sbjct: 415 ---------------------GCIPN---------------TVTYNSLITACAQGAQWEK 438
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ +M+ G +P+ +++T LI + G AL + MR PD + + I
Sbjct: 439 ASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIID 498
Query: 592 VCVRSKRL---KQAFSLFE---EMKHYQIQPNLVTYITLLRARSR 630
+ + ++A +LF+ E H++ Q + AR+R
Sbjct: 499 TLWETGVIWAQRKALALFQQAVEDGHFKQQRWDTSGAQRAEARTR 543
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A I C + ++ + DL +R + + N++ +++VC CG+ + Y
Sbjct: 215 AMISMCIYQQDVDRAMDLAKEMRVRNIER------NVHTYTALMNVCIKCGNCPLALDTY 268
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R N+ +N+L++V + ++V M+ GV + +YN L+ AC +
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMC 328
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A +Y K + +G + TY+ ++ + A ++V ++M+ G +
Sbjct: 329 GQPREAMAVY---KRMLDEGY-SPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERS 384
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
IT+SSLI+AC AG E A+ LF EM GC PN+ N L+ AC + Q+++A +F
Sbjct: 385 VITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVF 443
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 153/330 (46%), Gaps = 21/330 (6%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK--LDVFTYSTIVKVFADAKWWQ 380
D + +LLK AG A EI+ +++L+A L DV+TY+ ++ + +
Sbjct: 168 DSRATALLLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVD 227
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+ + ++M + N T+++L+N C G A+ + M Q G PN N L+
Sbjct: 228 RAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLI 287
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPN 499
+ +++ ++ TL KT+ NT I+ NM + ++++
Sbjct: 288 DVYGKMGLWEQGIKVL---TLMKTEGVEPVLRTYNTLIIACNMCGQPREAMA-------- 336
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ D+ +S P TTYN L+ A +V + EM G + I+++ LI A
Sbjct: 337 VYKRMLDEGYS--PNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISA 394
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C +G E AL++ M +G P+ V Y + I C + + ++A +FE+M+ P+
Sbjct: 395 CEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPD 454
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+VT+ L+ + + G + ++ L Y+ M
Sbjct: 455 VVTFTALISSYEKGG---QWRRALGAYEQM 481
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +GK ++ K P + T+I C +CG ++ A+Y+
Sbjct: 281 VTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKR 340
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N +N+L++ A L +EV++ M G + +Y+ L+ AC AG
Sbjct: 341 MLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQ 400
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA E++ E + +G + + TY++++ A W+ A +V E M G TP+ +
Sbjct: 401 WELALELFNE---MAGEGCIP-NTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVV 456
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
T+++LI++ G +A+ +E+M C+P++ N ++ E
Sbjct: 457 TFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWE 502
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY LM C C + N MR G PN +++ LID G G E +++L +M
Sbjct: 247 TYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLM 306
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G+ P + Y T I C + ++A ++++ M PN TY L+ A + G L
Sbjct: 307 KTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQL 366
Query: 635 HEVQQCLAVYQDMWKAG 651
+V + V+Q+M G
Sbjct: 367 DKV---MEVFQEMVHKG 380
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY ++ C D R L EMR + N ++T L++ C GN AL M
Sbjct: 212 TYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHM 271
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R+DG P+VV Y T I V + +Q + MK ++P L TY TL+ A + G
Sbjct: 272 RQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQP 331
Query: 635 HEVQQCLAVYQDMWKAG 651
E +AVY+ M G
Sbjct: 332 REA---MAVYKRMLDEG 345
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 201/434 (46%), Gaps = 24/434 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + + L A+ D + P+++ T++ G + I+ +
Sbjct: 359 VTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGE 418
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R+ NI FN+L+ ++ + +F ++V++ ++ D+ ++N LL + G
Sbjct: 419 MRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLL---AVFGQ 475
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ E+ G K ++ G + + T++T++ ++ +Q A+ V + ML AGVTP+
Sbjct: 476 NGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLS 534
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++++ A A GL EQ+ +F EM C+PN LL A + + +R L
Sbjct: 535 SYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAE-- 592
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
E Y G T+ + + K + + + + + ++ + + P +T N
Sbjct: 593 ----------EIYSGLTEPVPVL-LKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLN 641
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ KA ++N M G SP+ ++ L+ S N E + ++LK +
Sbjct: 642 AMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAK 701
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD+++Y T I R+ R+K A +F MK Y + P+++TY T + + Y +
Sbjct: 702 GLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFV---ASYAADSLF 758
Query: 638 QQCLAVYQDMWKAG 651
+ + V + M K G
Sbjct: 759 EDAIGVVRYMIKHG 772
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 183/425 (43%), Gaps = 64/425 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLN 290
G+ RD A+ + ++ P + I++V G G + K + ++S V +
Sbjct: 231 GRYRD---AVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPD 287
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
Y +N+L++ + +V++ M+ G D ++N LL + G + +E
Sbjct: 288 DYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLD---VYGKSRRPKEAME 344
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+K +E G + TY++++ +A + A+++K+ M+ G+ P+ T+++L++
Sbjct: 345 VLKEMEFSG-FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGF 403
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG+ E AM +F EM AGC+PN C F+ ++
Sbjct: 404 EKAGMDEPAMRIFGEMRAAGCKPN-------------ICTFNALIKM------------- 437
Query: 469 GEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
GN R + M ++ I N P T+N L+
Sbjct: 438 ----HGNRGRFAEMMKVFEEIEICNC------------------APDIVTWNTLLAVFGQ 475
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ V + EM+ G P ++ LI A G+ + A+ + K M E G++PD+ +
Sbjct: 476 NGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y + R +Q+ +F EMK + +PN +TY +LL A Y + E+++ + +
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA---YANSKEIERMHTLAE 592
Query: 646 DMWKA 650
+++
Sbjct: 593 EIYSG 597
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 28/304 (9%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K LDV+ Y++++ +A ++ A+ V + M G P IT++ ++N G+
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 416 QAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS-----KTQVALG 469
+ L M +G P+ N L+ C ++ A ++F LS K
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTL 329
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D G + R K+ + F F P+ TYN L+ A D
Sbjct: 330 LDVYGKSRR-----PKEAMEVLKEMEFS------------GFSPSIVTYNSLISAYARDG 372
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A L ++M G+ P+ ++T L+ +G E A++I MR G P++ +
Sbjct: 373 LLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFN 432
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IK+ R + +FEE++ P++VT+ TLL + G EV V+++M
Sbjct: 433 ALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVS---GVFKEM 489
Query: 648 WKAG 651
+AG
Sbjct: 490 KRAG 493
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ +C+ + + +++ + L+ P + +T++ V C M++ +E
Sbjct: 568 ELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFE 627
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+L+ + + ++ N+++ + + E+ M + G +A+YN L+ +
Sbjct: 628 ELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSE 686
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N ++E+ +K + AKG LK D+ +Y+T++ + + A ++ M + G+ P+
Sbjct: 687 NFERSEEV---LKEILAKG-LKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDV 742
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
IT+++ + + A L E A+ + M++ GC+ N N ++
Sbjct: 743 ITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDG 786
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G G V A IL +R+DG DV AYT+ I + R + A +F++M+
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246
Query: 613 QIQPNLVTYITLLRARSRYG 632
+P L+TY +L + G
Sbjct: 247 GCKPTLITYNVILNVYGKMG 266
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 194/417 (46%), Gaps = 33/417 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+I G + A Y ++ + N+ +N+L+ ++ KFT + V
Sbjct: 358 PDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAV 417
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 418 FDDLRSAGYVPDVVTWNTLL---SVFGQNGLDSEVSGVFKEMKKAGYIP-ERDTYVSLIS 473
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + A+++ + M+ AG+ P+ T++++++A A G EQA LF EM+ C+P
Sbjct: 474 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKP 533
Query: 432 NSQCCNILLQACVEACQFDR---------AFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ + LL A A + D+ A R+ R L KT V + + +
Sbjct: 534 DELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAF 593
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMK--AC 525
+ ++ + N + N+ S + K S + TYN LM +
Sbjct: 594 QELRRRRCSLDINVL-NAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSR 652
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D + ++++ E+++ G+ P+ S+ +I A G G ++ A ++ M+ G+ PD+V
Sbjct: 653 LGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVT 712
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Y IK V + ++A L + +PN T+ ++L+ SR+G + E + L+
Sbjct: 713 YNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLS 769
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 179/403 (44%), Gaps = 28/403 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTL 309
+P+ ++ G + + A+++ + V + +N + + + K +
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M++ G+ D +YN L+ C G A +++ E+K A G + D T++++
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMK---AAG-FEPDKVTFNSL 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V+ A+ + A+ V + M +AG TP+ +T++SLI+A GL+E+A+ L +EM G
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ + D A + + L Y+ ++ + K +
Sbjct: 357 KPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLC-TYNALI-KLHGVRGKFTEM 414
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLS 545
+ + FD + + P T+N L+ + V + EM+ G
Sbjct: 415 M------------AVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYI 462
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P ++ LI + G + A++I K M E G+ PD+ Y + R R +QA L
Sbjct: 463 PERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKL 522
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
F EM +P+ ++Y +LL A Y + ++ + + +D++
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHA---YANAKKLDKMKTLSEDIY 562
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 57/287 (19%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T ++VFA A L +L A P+ +++L++A + AG A+ +F+ M+
Sbjct: 158 TAIRVFARAG----CLAEASAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDG 213
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G +P N++ F ++ W K VAL + +M+
Sbjct: 214 GVQPALVTYNVV---------FHAYSKMSVPW---KEVVAL----------VDSMKE--- 248
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGL 544
+ + Y TYN L+ +CC + + +EM+ G
Sbjct: 249 -------DGIERDRY--------------TYNTLI-SCCRRRGLHREAAQVFDEMKAAGF 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++ L+D G + E A+ +LK M G +P VV Y + I V+ L++A
Sbjct: 287 EPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EM+ ++P++VTY TL+ R G ++ LA Y +M + G
Sbjct: 347 LKQEMEFRGMKPDVVTYTTLISGLDRVG---KIDAALATYSEMVRNG 390
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 57/332 (17%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D ++Y L+ A AG A ++ + G ++ + TY+ + ++ + W+
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRM----VDGGVQPALVTYNVVFHAYSKMSVPWKE 238
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ + + M G+ + T+++LI+ C GL +A +F+EM AG EP+ N LL
Sbjct: 239 VVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLD 298
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + + A G R+ N
Sbjct: 299 VYGKARKHEEAI--------------------GVLKRMENA------------------- 319
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
P+ TYN L+ A D +AL EM G+ P+ +++T LI
Sbjct: 320 --------GCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLD 371
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ AL M +G SP++ Y IK+ + + ++F++++ P++V
Sbjct: 372 RVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVV 431
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T+ TLL + G EV V+++M KAG
Sbjct: 432 TWNTLLSVFGQNGLDSEVS---GVFKEMKKAG 460
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 71/436 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + ++ +V A+ D + P TI+D G+C GD + + +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKIGDTVSALDLL 242
Query: 280 EDLRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ ++ N+ +++++++ D + + ++ MQ+ G+ D+ +YN ++ C
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G A+++ E+ LE K + DV TY+ ++ F + A ++ ++ML G+ P
Sbjct: 303 SGRWSDAEQLLQEM--LERK--ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NTIT+SS+I+ ++ A H+F M GC PN N L+ A + D L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T+ L D TT
Sbjct: 419 HEM----TETGLVAD-------------------------------------------TT 431
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ D L+ EM + GL P+ ++ L+D +G ++ AL++ K+M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 575 RE-----------DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +G+ PDV Y I + + +A L+EEM H I P+ +TY +
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 624 LLRARSRYGSLHEVQQ 639
++ + L E Q
Sbjct: 552 MIDGLCKQSRLDEATQ 567
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 176/404 (43%), Gaps = 51/404 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+++ ++I G C G + + + +++ + ++ ++ +N+L+N + KF
Sbjct: 288 PDLFTYNSMI--VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M G++ + +Y+ ++ C A+ ++ +L A ++ T++T+
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF----YLMATKGCSPNLITFNTL 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AK +++ +M G+ +T T+++LI+ G + A+ L +EM+ +G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ C+ LL + + A +F+ SK + ++G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG--------------- 506
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+P TYNIL+ + + + L EM G+ P+
Sbjct: 507 ---------------------VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ +ID ++ A Q+ M SP+VV +TT I ++ R+ LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM I N +TYITL+ + G+ + L ++Q+M +G
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGN---INGALDIFQEMISSG 646
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 25/275 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+++++ ++K F AL + G+ P+ +T+++L++ V +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN 475
+LF +M + C PN L+ + A L L TQ+ G DG
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 476 ---TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D +S ++ K + + +PN Y+ ++ + C D +
Sbjct: 230 CKIGDTVSALDLLRK--MEEISHIIPN---------------VVIYSAIIDSLCKDGRHS 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM+ G+ P+ ++ +I SG A Q+L+ M E +SPDVV Y I
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
V+ + +A L++EM I PN +TY +++
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T+ LM C + V+A L++ M GL P I++ ++D G+ AL
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240
Query: 570 ILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ M E + P+VV Y+ I + R A +LF EM+ I P+L TY +++
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 629 SRYGSLHEVQQCL 641
G + +Q L
Sbjct: 301 CSSGRWSDAEQLL 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 52/243 (21%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL------- 318
+ GD + + +++ S + +I ++L++ + LK LE++K MQK
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 319 ----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
GV D+ +YNIL+ G + A+E+Y E+ H +G++ D TYS+++
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVP-DTITYSSMIDGLC 557
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ------------------ 416
A ++ + M S +PN +T+++LIN AG V+
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 417 -----------------AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
A+ +F+EM+ +G P++ +L + RA +
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Query: 460 TLS 462
+S
Sbjct: 678 QMS 680
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++ IL+K C+ AL ++ +GL P+ +++ L+ V AL + M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
E P+VV +TT + R R+ +A +L + M +QP +TY T++ + G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+TILI + AL + + G+ PDVV + T + R+ +A +LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+PN+VT+ TL+ R G + E
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVE 202
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 173/412 (41%), Gaps = 58/412 (14%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------ 341
N +FNSL++ NA D + ++ M G YNI + + C +G +
Sbjct: 343 NPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC-SGEELPSPDLL 401
Query: 342 -LAQEIYGEV-----------------------KHLEAKGVLKL--------DVFTYSTI 369
LA+++Y E+ K +A ++KL D TYS +
Sbjct: 402 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKV 461
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + A + ++M S GV P+ T++ LI++ GL+EQA F+EM GC
Sbjct: 462 ITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGC 521
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ LL A ++ Q +A +F T++ + + G G + +
Sbjct: 522 SPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACE 581
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ K + T + V + Y + S P TY L+ C + V A L++ M
Sbjct: 582 VYAK----MIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G PNHI + LID G ++ A ++ M + G P V YT+ I + +RL
Sbjct: 638 SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A + +M PN+VTY ++ R G E Q+ L + M K G
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIG---ECQKALKLLSMMEKRG 746
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 186/420 (44%), Gaps = 52/420 (12%)
Query: 275 SRAIYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ +YE++ + + LN + N L + D F ++ K M + G + D ++Y+ +
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAF--QIIKLMMRKGFVPDTSTYSKV 461
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C A A ++ E+K + GV+ DV+TY+ ++ F + A ++M
Sbjct: 462 ITFLCEAMKVEKAFLLFQEMKSV---GVIP-DVYTYTILIDSFCKVGLIEQARSWFDEME 517
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +P+ +T+++L++A V QA +F M+ AGC PN+ + L+ +A +
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQ 577
Query: 451 RAFRLFRSWTLSKTQVALGEDYDG-NTDRISN-------------MEHK--DKQSITNT- 493
+A ++ + V ++G +TD I+ HK D Q + +
Sbjct: 578 KACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637
Query: 494 ------PN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYR 531
PN + ++ F K + + PT TY L+ A D
Sbjct: 638 SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697
Query: 532 VKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
A+ +++M +PN +++T +ID G + AL++L +M + G +P+VV YT+
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSL 757
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA-VYQDMW 648
I +S ++ + LF +M PN VTY L+ G L E L+ + Q W
Sbjct: 758 IDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 817
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 45/388 (11%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A + V K M +LG D + +A C G + +
Sbjct: 210 YNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGR-------WSDAL 262
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + KLD + ++ +A + A+ M PN +T+ +L+
Sbjct: 263 VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKK 322
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + M+ GC PN N L+ + A + A++L +
Sbjct: 323 KQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVY 382
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVPN-SHYSSFDKRF- 509
+ + GE+ + D ++ E ++ + NT NF FDK F
Sbjct: 383 NIFIGSICSGEELP-SPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441
Query: 510 --------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C KA L EM++VG+ P+ ++TILID+
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G +E A M G SP VV YT + +++K++ QA +F M PN +
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ + G E Q+ VY M
Sbjct: 562 TYSALVDGLCKAG---ESQKACEVYAKM 586
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 167/394 (42%), Gaps = 60/394 (15%)
Query: 253 SPNMYICRTIIDVCGICGDY--MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ +ID G+C + + ++ + + + S N ++++L++ L
Sbjct: 608 APNVVTYGALID--GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNA 665
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EV+ M K G + + +Y L+ A LA ++ ++ LE+ +V TY+
Sbjct: 666 QEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM--LESS--CTPNVVTYTA 721
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ Q ALK+ M G PN +T++SLI+ +G V+ ++ LF +M+ G
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN +L+ C A D A L +S M+
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSL-----------------------LSEMKQ---- 814
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
T P +V Y S + FS K + L+ E+ + G+
Sbjct: 815 --TYWPKYVQG--YCSVVQGFSKK----------------FIASLGLLEELESHGMVSIA 854
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSL 605
+ +LID+ +G +E AL++ K M E S ++ + YT+ I+ + +L++AF L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ E+ + P L +I L++ + +E Q
Sbjct: 915 YSEITRKGVVPELSAFICLIKGLIKVNKWNEALQ 948
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 172/415 (41%), Gaps = 43/415 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++R+ ++++ S + ++ + +L++ + + ++
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG---------------EVKHLEAK 356
+ M G + +Y+ L+ C AG + A E+Y E +H ++
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS- 606
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ +V TY ++ A A ++ + M S G PN I + +LI+ G ++
Sbjct: 607 --IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +F M + G P L+ A + + D A ++ S L + Y
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVL-SQMLESSCTPNVVTYTAMI 723
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRV 532
D + + K S +KR P TY L+ K+ D
Sbjct: 724 DGLCRIGECQKAL----------KLLSMMEKR-GCNPNVVTYTSLIDGLGKSGKVDMSL- 771
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L +M T G +PN++++ +LI+ C +G ++ A +L M++ V Y + ++
Sbjct: 772 -QLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQ- 829
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
SK+ + L EE++ + + Y L+ + S+ G L ++ L ++++M
Sbjct: 830 -GFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL---EKALELHKEM 880
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K +V A D + PN I +ID G C G ++ ++ +
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALID--GFCKVGKLDNAQEVFFRMSKCGYLPT 680
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ + SL++ D L ++V M + ++ +Y ++ C G Q+
Sbjct: 681 VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE---CQKALK 737
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E +G +V TY++++ + M+L++ M++ G PN +T+ LIN C
Sbjct: 738 LLSMMEKRGC-NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796
Query: 409 ANAGLVEQAMHLFEEMLQ 426
AGL+++A L EM Q
Sbjct: 797 CAAGLLDEAHSLLSEMKQ 814
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 171/354 (48%), Gaps = 26/354 (7%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +NS++N + D L++ + M + V AD+ +Y+ ++ + C G A ++
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K + TY+++V A W +++ +DM S + PN IT++ LI+
Sbjct: 229 ---KEMETKGI-KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTLSKT 464
G +++A L++EM+ G PN+ N L+ C++ + + L S
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G ++ ++ K + KR T TY+IL++
Sbjct: 345 IVTFTSLIKGYC-KVKRVDEGMKL-------------FRKISKR-GLVANTVTYSILVQG 389
Query: 525 CCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + L EM ++G+ P+ +++ IL+D +G +E AL+I + +++ M+ D
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V YT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 503
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 180/387 (46%), Gaps = 24/387 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 168 PNVVTYNSIVN--GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L+ C AG ++ +K + ++ ++ +V T++ +
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQL---LKDMTSRKIIP-NVITFNVL 281
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ VF Q A ++ ++M++ G++PNTIT++SL++ + +A ++ + M++ C
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ L++ + + D +LFR +SK + NT S + Q
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRK--ISKRGLV------ANTVTYSIL----VQG 389
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ P TY IL+ C + KAL +++ ++ +
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ +TI+I+ G VE A + + G+ P+V+ YT I + L +A L
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 509
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSL 634
+M+ +PN TY TL+RA R G L
Sbjct: 510 KMEEDGNEPNDCTYNTLIRAHLRDGDL 536
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 142/352 (40%), Gaps = 57/352 (16%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
V G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 247 VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNML----DLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+K+ + G+ NT+T+S L+ +G +E A LF+EM+ G P+ ILL
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F SK + +
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDI-------------------------------- 450
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
Y I+++ C A L + G+ PN +++T++I
Sbjct: 451 ---------------VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 495
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G++ A +L+ M EDG P+ Y T I+ +R L + L EEMK
Sbjct: 496 CKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 147/366 (40%), Gaps = 58/366 (15%)
Query: 290 NIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NIY N ++N K F V + KLG D ++N L+ CL E
Sbjct: 99 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK---VSEAV 155
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
V + G + +V TY++IV + +AL + M V + T+S++I++
Sbjct: 156 VLVARMVENGC-QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDS 214
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G ++ A+ LF+EM G + + N L+ +A +++ +L + T K
Sbjct: 215 LCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK---- 270
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+PN T+N+L+
Sbjct: 271 ----------------------------IIPN---------------VITFNVLIDVFVK 287
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ L EM T G+SPN I++ L+D + A +L +M + SPD+V
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVT 347
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+T+ IK + KR+ + LF ++ + N VTY L++ + G L ++ ++Q
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE---LFQ 404
Query: 646 DMWKAG 651
+M G
Sbjct: 405 EMVSLG 410
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 62/348 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P I F + F K+ L A Y SPN +++D G C S
Sbjct: 271 IIPNV-ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD--GYCMQNRLS 327
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
A + + + N + +I F SL+ + +++++ + K G++A+ +Y+IL+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C +G +A+E++ E+ L GVL DV TY ++ D + AL++ ED+
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSL---GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ + + + ++ +I G VE A +LF + G +PN +++
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG--------- 494
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L + +LS+ + L + + DGN
Sbjct: 495 ---LCKKGSLSEANILLRKMEEDGN----------------------------------- 516
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
+P TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 517 -EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 139/654 (21%), Positives = 263/654 (40%), Gaps = 85/654 (12%)
Query: 59 LLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVAS 118
L S R+ LS Y + KDGR+EE +V+ + K + ++ VA
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--------KETGDIVVDEVAY 327
Query: 119 GIVKS--IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVG 176
G++ + + GR+D V ++ + G+ + LF + L G +E
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIH-VNLF------VYNTMINGLCKLGRMEEVQK 380
Query: 177 LMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPR-----ADILFCNFVREF 231
+++ +E+ + + I C + + A ++ R + + ++ F
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYC-REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
+ ALR + K +PN C T++D G ++ ++++ ++ + N+
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN+++N + E+ M++L D +Y L C G A + +
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 350 VKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++HL A V + F + AK W + +M + G++PN +T+ +LI
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFI-----AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G + +A +L+ EM+ G PN C+ L+ + + D A + +
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674
Query: 461 ------LSKTQVALGEDYDGNTDRISNMEH------------KDKQSITNT---PNFVP- 498
+ K + DGN + M + D +S+ + F+P
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 499 NSHYSSF----------DKRFSFK---------PTTTTYNILMKACCTD--YYRVKALMN 537
N YSS D+ FS + P TYN L+ C R L N
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
++++ G+SPN I++ LID G A ++ + M E+G+ P V+ Y+ I
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQG 854
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A L ++M + PN +TY TL+ + G++ E+ + +Y +M G
Sbjct: 855 YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK---LYDEMHIRG 905
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 68/378 (17%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVM 321
C D ++A+ E++ + +N+ ++++M+ D + LE ++Q+ G+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE---SLQRKGLS 285
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y +L+K C G A+ + VK ++ G + +D Y ++ +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERV---VKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A +V+ +M AG+ N ++++IN G +E+ + +EM G P+ N L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+AF + R
Sbjct: 403 GYCREGSMRKAFEMCRMMV----------------------------------------- 421
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILID 556
R TT TYN L+K C+ D R+ LM + G++PN IS + L+D
Sbjct: 422 ------RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR---GVAPNEISCSTLLD 472
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E AL + K G++ +V+ + T I + R+ +A L + MK + P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 617 NLVTYITLLRARSRYGSL 634
+ +TY TL + G L
Sbjct: 533 DSLTYRTLFDGYCKLGQL 550
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 31/380 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y D V+ ++ + + +A L L V+ M K+G + S N LL +
Sbjct: 140 VYRDFTFSAVSFDLLL---RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ +A +YG+++ GVL D FT + + K + A++ E+M G+ N
Sbjct: 197 GDPGMAAMVYGQMR---IAGVLP-DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + ++++ G E A + E + + G PN +L++ + + + A R+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 458 ----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + +VA G +G R M+ D + N H + F
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQR-GRMD--DATRVRNEMRDA-GIHVNLF-------- 360
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN ++ C V+ ++ EM VG+ P+ S+ LID G++ A ++
Sbjct: 361 ---VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++M +G++ + Y T +K + A L+ M + PN ++ TLL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + +Q L ++++ G
Sbjct: 478 G---KTEQALNLWKETLARG 494
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 53/257 (20%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N+++ C +G A+ ++ + L K L D FTYS+++ A + A ++
Sbjct: 703 WNVIIFGLCKSGRIADAKSLF---ESLRNKRFLP-DNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ MLSAG+TPN IT++SLI +G + +A++LF ++ G PN N L+ +
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ AF+L KQ +
Sbjct: 819 GKTTEAFKL-------------------------------KQKMVEE------------- 834
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+PT TY+IL+ CT Y +A L+++M + PN+I++ LI SGN+
Sbjct: 835 ---GIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNM 891
Query: 565 EGALQILKIMREDGMSP 581
E ++ M G+ P
Sbjct: 892 EEISKLYDEMHIRGLLP 908
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ + ++I C G ++ ++ + + S +T NI +NSL+ + L + +
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +Q G+ + +YN L+ C G T E + + + +G+ + V TYS ++
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTT---EAFKLKQKMVEEGI-QPTVITYSILIY 848
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+K+ + M+ V PN IT+ +LI+ +G +E+ L++EM G P
Sbjct: 849 GLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Query: 432 NSQCCN 437
+ N
Sbjct: 909 TNWIGN 914
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 212/531 (39%), Gaps = 100/531 (18%)
Query: 102 GNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNE 161
G ++ + L+ + I R R + + +L+ + +G+ P DG +
Sbjct: 62 GEAREWGTELNEVSYNTAISACARRDRFEEALRLLRDMPSVGLVP----DGWSYGATLGA 117
Query: 162 CQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD 221
C +G+ + L+ +EE + + + + C +K N A ++ R++
Sbjct: 118 CA---GTGQASTALRLLREMEERGIEATASNYKHALYACCDSKTGENWEA-AAALLRRSE 173
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
L NF +G+ +I C G + K+ + +
Sbjct: 174 TLRNNFF--YGR----------------------------VIMACRRAGQWQKALEVLRE 203
Query: 282 LRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + +I+ ++++++V K ++ + K GV + SYN++L AC
Sbjct: 204 MSRVGLAPDIFCYDTVISVACMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKK 263
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGV 394
AG A + ++ + G DV +Y+T + + W++AL V DM + +
Sbjct: 264 AGRPRQAVSL---LRAMRGHGC-SPDVISYNTAISACVKRREWELALFVLRDMQRPDSRL 319
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT ++ S+I CA G V+QA+ LF+EM +AG + ++
Sbjct: 320 EPNTYSYGSVITVCATCGEVDQAVGLFDEMPEAGVKVDA--------------------- 358
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ VA+ DG + +Q+I+ + H
Sbjct: 359 ------FTYNSVAMAYARDG----------RWRQAISTLSDMSELGHVGD---------- 392
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y ++AC + R +L+ EMR G+ PN ++ I ACG G E L++L
Sbjct: 393 VVSYTAAIRACGWAGECDRALSLLREMREEKGVKPNEKTFAAAISACGHGGRWERGLELL 452
Query: 572 KIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
M R G PD YT+AIK C + + +QAF+L E P+ TY
Sbjct: 453 SEMPRSTGFLPDADCYTSAIKACGKGGQWEQAFTLLREAAAEGTTPDAKTY 503
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 58/373 (15%)
Query: 303 HDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
H L++ L + +++ LG+ ++ S + L AC AG E+ GE + +
Sbjct: 15 HSLRWREALGLLYHIRALGITPNVKSVSAALNACGQAGQWQRCLELLGEAREWGTE---- 70
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
L+ +Y+T + A ++ AL++ DM S G+ P+ ++ + + ACA G A+ L
Sbjct: 71 LNEVSYNTAISACARRDRFEEALRLLRDMPSVGLVPDGWSYGATLGACAGTGQASTALRL 130
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EM + G E + L AC + SKT GE+++ +
Sbjct: 131 LREMEERGIEATASNYKHALYACCD----------------SKT----GENWEAAAALL- 169
Query: 481 NMEHKDKQSITNTPNF------VPNSHYSSFDK---------RFSFKPTTTTYNILMKAC 525
++S T NF + + K R P Y+ ++
Sbjct: 170 ------RRSETLRNNFFYGRVIMACRRAGQWQKALEVLREMSRVGLAPDIFCYDTVISVA 223
Query: 526 C-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + + L+ E G+ + IS+ +++ AC +G A+ +L+ MR G S
Sbjct: 224 CMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKKAGRPRQAVSLLRAMRGHGCS 283
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH--YQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV++Y TAI CV+ + + A + +M+ +++PN +Y +++ + G EV
Sbjct: 284 PDVISYNTAISACVKRREWELALFVLRDMQRPDSRLEPNTYSYGSVITVCATCG---EVD 340
Query: 639 QCLAVYQDMWKAG 651
Q + ++ +M +AG
Sbjct: 341 QAVGLFDEMPEAG 353
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 163/449 (36%), Gaps = 119/449 (26%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF----- 307
+PN+ ++ CG G + + + + R LN +N+ ++ A +F
Sbjct: 35 TPNVKSVSAALNACGQAGQWQRCLELLGEAREWGTELNEVSYNTAISACARRDRFEEALR 94
Query: 308 --------------------------------TLEVYKNMQKLGVMADMASYNILLKACC 335
L + + M++ G+ A ++Y L ACC
Sbjct: 95 LLRDMPSVGLVPDGWSYGATLGACAGTGQASTALRLLREMEERGIEATASNYKHALYACC 154
Query: 336 -------------------------LAGNTVLAQEIYGEV-KHLE-----AKGVLKLDVF 364
G ++A G+ K LE ++ L D+F
Sbjct: 155 DSKTGENWEAAAALLRRSETLRNNFFYGRVIMACRRAGQWQKALEVLREMSRVGLAPDIF 214
Query: 365 TYSTIVKVF---ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y T++ V + W++A + + GV + I+++ +++AC AG QA+ L
Sbjct: 215 CYDTVISVACMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKKAGRPRQAVSLL 274
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M GC P+ N + ACV+ +++ A + R +
Sbjct: 275 RAMRGHGCSPDVISYNTAISACVKRREWELALFVLR-----------------------D 311
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
M+ D + +P T +Y ++ C C + + L +EM
Sbjct: 312 MQRPDSR----------------------LEPNTYSYGSVITVCATCGEVDQAVGLFDEM 349
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ + ++ + A G A+ L M E G DVV+YT AI+ C +
Sbjct: 350 PEAGVKVDAFTYNSVAMAYARDGRWRQAISTLSDMSELGHVGDVVSYTAAIRACGWAGEC 409
Query: 600 KQAFSLFEEMKHYQ-IQPNLVTYITLLRA 627
+A SL EM+ + ++PN T+ + A
Sbjct: 410 DRALSLLREMREEKGVKPNEKTFAAAISA 438
>gi|298709629|emb|CBJ31438.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 762
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 180/411 (43%), Gaps = 31/411 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEV 311
P+ +I G + +S + +D+R V N + FN+ + A + + +
Sbjct: 325 PDPKTYSAVITASGKAKKWEESLRLLDDMREVGVEPNCHNFNAAIASCGVARQWQRAVGL 384
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ ++SYN + AC + V A + GE++ A GV + + TY ++
Sbjct: 385 LGEMKGGGLELGLSSYNAAILACATSARGVEASALLGEMR---AAGV-EPNAATYLPVIT 440
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A W+ +L +M + G+ PN+ ++++I AC +A E+A+ + EM AG +
Sbjct: 441 ACGKAGMWEQSLVHLREMTAQGLAPNSPIYTAVITACGHAKEWEKALEILAEMPAAGVKA 500
Query: 432 NSQCCNILLQACVEACQFDRAFRLFR--------SWTLSKTQVALGE-DYDGNTDRISNM 482
+ N L AC A Q + A L S S Q A+ +G D +
Sbjct: 501 SVYHYNTALDACDRAAQGEAAVVLLHDMDGPPGVSPNPSSYQSAMSACGSEGRVDLALEL 560
Query: 483 EHKDKQSITNTPNFVPNS--HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
+ K + T P P+S + S+ S P + + + K L+ E R
Sbjct: 561 LEEVKAASTTRPELAPSSKLYASALQACVSSPPDGS-----------NARKAKELLEEAR 609
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G++ N S+ I A +G V+ AL L M++ G++P+V++Y+ + + +
Sbjct: 610 GAGIALNWRSYNCAIIAAAKAGEVDEALARLAEMKDAGLTPNVMSYSWILPALASRELWE 669
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +L EE+K Y + Y ++ A S G EV V +DM AG
Sbjct: 670 ESLALVEEIKGYGLLRTPFAYSVVVAAHSAAGRWEEV---CGVLEDMIAAG 717
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 177/427 (41%), Gaps = 30/427 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++ + + K R AL + PN Y + I CG + ++ + E
Sbjct: 33 MYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAIKACGSKKRWREALELLERR 92
Query: 283 R---SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
R + ++ Y ++ + N+ + LE+ + ++ G SY + AC +
Sbjct: 93 REDLGEGSPVDEYSLSAAIYACGNSGETGKVLELLEELKVGGKTPHPFSYTAAISACGDS 152
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +++ +++ + +DV+ T + A + W+ ALK+ +ML A + N
Sbjct: 153 GMGDKVMQLFEDMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEMLDA-LPAN 211
Query: 398 TITWSSLIN---------ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ + +N AC AG + ++ L +EM P S C +Q+CV Q
Sbjct: 212 SDAPEANLNLDALRDASLACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNKQ 271
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
++RA L TL+ V E Y + S + P + R
Sbjct: 272 WERATSLIDEMTLTYGMVPDLETY------------QVAISAAGCASLWPKATKMLRQMR 319
Query: 509 F-SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P TY+ ++ A + L+++MR VG+ PN ++ I +CG + +
Sbjct: 320 QNGLQPDPKTYSAVITASGKAKKWEESLRLLDDMREVGVEPNCHNFNAAIASCGVARQWQ 379
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +L M+ G+ + +Y AI C S R +A +L EM+ ++PN TY+ ++
Sbjct: 380 RAVGLLGEMKGGGLELGLSSYNAAILACATSARGVEASALLGEMRAAGVEPNAATYLPVI 439
Query: 626 RARSRYG 632
A + G
Sbjct: 440 TACGKAG 446
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
++ F Y++ + A A+ W+ AL + + M + G+ PN+ SS I AC + +A+
Sbjct: 28 RITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAIKACGSKKRWREALE 87
Query: 420 LFE---EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSKTQV 466
L E E L G + + + AC + + + L ++ +
Sbjct: 88 LLERRREDLGEGSPVDEYSLSAAIYACGNSGETGKVLELLEELKVGGKTPHPFSYTAAIS 147
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVP----NSHYSSFDKRFSFKPTTTTYNILM 522
A G+ G D++ + +Q+ T F+ + ++ K +K Y ++
Sbjct: 148 ACGDS--GMGDKVMQLFEDMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEML 205
Query: 523 KACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A + +A +N +R L ACG +G+ + +L++L MR ++
Sbjct: 206 DALPANSDAPEANLNLDALRDASL------------ACGRAGDWKASLKLLDEMRAVAIT 253
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRA 627
P+ Y A++ CVR+K+ ++A SL +EM Y + P+L TY + A
Sbjct: 254 PESGCYKAAMQSCVRNKQWERATSLIDEMTLTYGMVPDLETYQVAISA 301
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN I +I CG ++ K+ I ++ + V ++Y +N+ ++ A + +
Sbjct: 464 APNSPIYTAVITACGHAKEWEKALEILAEMPAAGVKASVYHYNTALDACDRAAQGEAAVV 523
Query: 311 VYKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----HLEAKGVLKLDVF 364
+ +M GV + +SY + AC G LA E+ EVK E KL
Sbjct: 524 LLHDMDGPPGVSPNPSSYQSAMSACGSEGRVDLALELLEEVKAASTTRPELAPSSKLYAS 583
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
V D + A ++ E+ AG+ N +++ I A A AG V++A+ EM
Sbjct: 584 ALQACVSSPPDGSNARKAKELLEEARGAGIALNWRSYNCAIIAAAKAGEVDEALARLAEM 643
Query: 425 LQAGCEPNSQCCNILLQA 442
AG PN + +L A
Sbjct: 644 KDAGLTPNVMSYSWILPA 661
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNS--LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K++ + E+ R + LN +N + A ++ L M+ G+ ++ SY+ +L
Sbjct: 600 KAKELLEEARGAGIALNWRSYNCAIIAAAKAGEVDEALARLAEMKDAGLTPNVMSYSWIL 659
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A + L +E V+ ++ G+L+ F YS +V + A W+ V EDM++
Sbjct: 660 PALA---SRELWEESLALVEEIKGYGLLRTP-FAYSVVVAAHSAAGRWEEVCGVLEDMIA 715
Query: 392 AGVT 395
AGV
Sbjct: 716 AGVA 719
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 182/398 (45%), Gaps = 23/398 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + GD K ++E + + ++ + L+N+ A K + LEV K M
Sbjct: 55 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 114
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A I+ ++ K +K DV Y+ I+ F
Sbjct: 115 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL----IKDGIKPDVVLYNNIITAFCG 170
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ ++M P T T+ +I+ A G +++A+ +F+ M +GC P
Sbjct: 171 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 230
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + ++A ++ TL+ N + + H S+ +T
Sbjct: 231 YNALILGLVEKRKMEKAEQILDEMTLAGVSP--------NEHTYTTIMH-GYASLGDTGK 281
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
Y + + + TY L+KACC AL EM + N + I
Sbjct: 282 AFA---YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNI 338
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A +++ M+ +G+ PD+ YT+ I C ++ +++A EEMK
Sbjct: 339 LIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVG 398
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL+ +R SL E + L+ +++M +G
Sbjct: 399 VKPNVKTYTTLINGWAR-ASLPE--KALSCFEEMKLSG 433
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 169/399 (42%), Gaps = 39/399 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ +I++ G K+ + +++ + N+ ++ L+N + D
Sbjct: 85 NPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFA 144
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++++ K G+ D+ YN ++ A C G A E++ K + T+ I+
Sbjct: 145 IFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR----TFMPII 200
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
FA + AL V + M +G P T+++LI +E+A + +EM AG
Sbjct: 201 HGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 260
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
PN ++ +AF F Q+ + Y+ + R+ S +
Sbjct: 261 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDV-YTYEALLKACCKSGRMQSALA 319
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
+ S N P T YNIL+ D + LM +M+
Sbjct: 320 VTKEMSAQNIPR------------------NTFIYNILIDGWARRGDVWEAADLMQQMKR 361
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I+AC +G+++ A + ++ M+ G+ P+V YTT I R+ ++
Sbjct: 362 EGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEK 421
Query: 602 AFSLFEEMKHYQIQPNLVTYITLL-----RARSRYGSLH 635
A S FEEMK ++P+ Y L+ RA +G ++
Sbjct: 422 ALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIY 460
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 155/378 (41%), Gaps = 50/378 (13%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++ + ++ +LN ++ +++ ++ + + M++ G+ A + Y+ ++ +
Sbjct: 6 FQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM 65
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G+ ++ K L V TY ++ ++A AL+V ++M AG+
Sbjct: 66 VGDEDKCLLVFERFKECG----LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 121
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T+S LIN A +FE++++ G +P+ N ++ A + DRA
Sbjct: 122 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTV 181
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---- 512
+ E + ++ T F+P H F ++ K
Sbjct: 182 K-------------------------EMQKQRHKPTTRTFMPIIH--GFARKGEMKKALD 214
Query: 513 -----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
PT TYN L+ KA +++EM G+SPN ++T ++
Sbjct: 215 VFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYA 274
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G+ A +R++G+ DV Y +K C +S R++ A ++ +EM I N
Sbjct: 275 SLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 334
Query: 620 TYITLLRARSRYGSLHEV 637
Y L+ +R G + E
Sbjct: 335 IYNILIDGWARRGDVWEA 352
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A + D SPN + TI+ GD K+ A + LR + + L++Y
Sbjct: 240 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVY 299
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 300 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL---M 356
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++ +GV + D+ TY++ + + A Q A K E+M S GV PN T+++LIN A
Sbjct: 357 QQMKREGV-QPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 415
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A L E+A+ FEEM +G +P+ + L+ +
Sbjct: 416 ASLPEKALSCFEEMKLSGLKPDRAVYHCLMTS 447
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F +K ++ AL +D + P ++ +I K+ I +++
Sbjct: 196 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V+ N + + ++M+ A D + ++ G+ D+ +Y LLKACC +G
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRM- 314
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + A+ + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 315 --QSALAVTKEMSAQNIPR-NTFIYNILIDGWARRGDVWEAA-DLMQQMKREGVQPDIHT 370
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S INAC+ AG +++A EEM G +PN + L+ A ++A F
Sbjct: 371 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 430
Query: 461 LS 462
LS
Sbjct: 431 LS 432
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F + A+ +K P II G+ K+ +++
Sbjct: 159 VLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDM 218
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V ++ ++ M GV + +Y ++ G+
Sbjct: 219 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGD 278
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + L +G L+LDV+TY ++K + Q AL V ++M + + NT
Sbjct: 279 TGKA---FAYFTKLRDEG-LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 334
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
++ LI+ A G V +A L ++M + G +P+ + AC +A RA +
Sbjct: 335 IYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 389
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+PR ++ + + ++ D+ A K+ P+++ + I+ C GD ++
Sbjct: 329 IPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT 388
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
E+++S V N+ + +L+N A + L ++ M+ G+ D A Y+ L+
Sbjct: 389 KTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 445
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 203/451 (45%), Gaps = 51/451 (11%)
Query: 228 VREFG-------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+RE+G + D V+A ++A + PN++I ++I D + A E
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ SQ + LN VF S+++ +A + + ++ + ++ YN +++A C AG
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-------------------AKWW 379
N + + +++ +G L L Y+T++ FA+ A
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGL----YTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNM 306
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL + E+M GV+PN + ++ +++ A G A ++E+M+ AG +P+ NIL
Sbjct: 307 AKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNIL 366
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A +A + D+A + + ++ + E Y D + K
Sbjct: 367 VHAFCKAGRMDKALGVLENIEANRLLPTI-ETYTSILDGYVKGGNIQKA----------- 414
Query: 500 SHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
FD K +P +YN L+ A + ++NEM G+ P+ +T L
Sbjct: 415 --LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALT 472
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G+VE A + + M+++ ++ D+VAY +K C S + A +F+++ ++
Sbjct: 473 EGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLK 532
Query: 616 PNLVTYITLLR-ARSRYGSLHEVQQCLAVYQ 645
N +TY T+L A +R G + E ++ ++ +
Sbjct: 533 HNQITYCTMLDGAYARAGRVEEAEELVSAME 563
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 59/379 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMAS 326
G+ K+ I E++ V+ N ++ +M+ A FT +V+++M G+ D+
Sbjct: 303 AGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI 362
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNIL+ A C AG + G ++++EA +L + TY++I+ + Q AL+V
Sbjct: 363 YNILVHAFCKAGRM---DKALGVLENIEANRLLPT-IETYTSILDGYVKGGNIQKALEVF 418
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ + +AG+ P ++++SL++ A A +E A + EML G P+ + L +
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART 478
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++AF +F+ + K +A+
Sbjct: 479 GDVEKAFGVFQR--MKKENLAI-------------------------------------- 498
Query: 507 KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID-ACGGSGN 563
Y L+KACC + + ++ GL N I++ ++D A +G
Sbjct: 499 -------DIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGR 551
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM---KHYQIQPNLVT 620
VE A +++ M DG PD + Y + I S R + +L +M Q +P++ T
Sbjct: 552 VEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT 611
Query: 621 YITLLRARSRYGSLHEVQQ 639
Y TL++ ++ G + ++
Sbjct: 612 YNTLIQVYAQAGFIPRAEE 630
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 59/398 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
++ AL + KH SPN I I+D GD+ + ++ED+ S + +I ++N
Sbjct: 305 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYN 364
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L++ A + L V +N++ ++ + +Y +L GN A E++ +K
Sbjct: 365 ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK-- 422
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
L+ V +Y++++ A A+ + A + +ML+ GV P+ +++L A G
Sbjct: 423 --TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGD 480
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGE 470
VE+A +F+ M + + LL+AC + A +F+ T L Q+
Sbjct: 481 VEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCT 540
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG R +E ++
Sbjct: 541 MLDGAYARAGRVEEAEE------------------------------------------- 557
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG---MSPDVVAYT 587
L++ M G P+ + + LI+A G SG E +L M + PD+ Y
Sbjct: 558 ----LVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYN 613
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
T I+V ++ + +A LF+ + ++ P+ T+ L+
Sbjct: 614 TLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 651
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+K +V Y++++ +A+A+ + A+ E+MLS G+ N + S+I+ A+AG E A
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 221
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
H FE+ P N ++QA +A + L L++ + E + GN
Sbjct: 222 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL-----LAQMEE---EGFQGNLGL 273
Query: 479 ISNM-----EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ + E +D++ SF R P + KA
Sbjct: 274 YTTVLNGFAEIRDEEKCL------------SFFHRLKVSPQAGN---MAKAL-------- 310
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ EM G+SPN + + +++D G+ A ++ + M G+ PD+V Y +
Sbjct: 311 DILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAF 370
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ R+ +A + E ++ ++ P + TY ++L + G+ +Q+ L V+ + AG
Sbjct: 371 CKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN---IQKALEVFDRIKTAG 425
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP Y +L+ A D +A MR + PN +T LI A + ++EGA+
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+ + + + I + + A FE+ K + P + Y ++++A
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 630 RYGSLHEVQQCLA 642
+ G++ V+ LA
Sbjct: 248 QAGNMETVEALLA 260
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 203/452 (44%), Gaps = 46/452 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL ++ R + ++ SP++ ++ID G G + +++ +++ +I
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N + E + M+ G+ ++ +Y+ L+ A C G A +++ ++
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G+L + FTY++++ A A K+ DML AGV N +T+++L++
Sbjct: 421 RR---TGLLP-NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVA 467
AG + +A +F ML+ G PN Q L+ ++A + + A ++ + T + +
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536
Query: 468 LGEDYDGNTDRIS------NMEHKDKQSITNTP---NFVPNSHYSSFD-----------K 507
G G+ + +E + I+ P + ++++ + +
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 508 RFSFKPTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ T TY +L+ C DY+ M ++GL PN +T LID
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYF------CRMLSLGLQPNVAVYTSLIDGLC 650
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ +E A ++ M+ GM+PD+ A+T I ++ L++A L M I+ +L
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y +L+ S+ G LH+ ++ + +M + G
Sbjct: 711 VYTSLVSGFSQCGELHQARK---FFNEMIEKG 739
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 171/383 (44%), Gaps = 32/383 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+++ +ID GD SR ++ +R ++ ++ +NSL++ L+
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 345
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ +G + D+ +YN L+ C A E + E+K+ LK +V TYST++
Sbjct: 346 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN----NGLKPNVVTYSTLI 401
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F Q A+K+ DM G+ PN T++SLI+A AG + +A L +MLQAG +
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ---VALGEDYDGNTDRISNMEH 484
N LL +A + A +FRS +S Q AL Y +R+ +
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMK 520
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQ + KP Y ++ C+ K ++ EM++
Sbjct: 521 ILKQM-----------------TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+S N + T +IDA +G AL + M++ G+ +V Y I ++ ++ A
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA 623
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
F M +QPN+ Y +L+
Sbjct: 624 VDYFCRMLSLGLQPNVAVYTSLI 646
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 172/424 (40%), Gaps = 30/424 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + + K + A + K + PN+ T+ID C + M AI +
Sbjct: 360 ITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID--AFCKEGMMQGAIKLF 417
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
D+R + N + + SL++ N A +L ++ +M + GV ++ +Y LL C A
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 477
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + A+E++ + K + + Y+ +V + A+ + A+K+ + M + P+
Sbjct: 478 GRMIEAEEVFRSM----LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
I + S+I + +E+ + EEM G N ++ A +A + A F+
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 593
Query: 458 SWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ T V DG K I Y +P
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLC----------KAGIVELA-----VDYFCRMLSLGLQPN 638
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L+ C + K L +EM+ G++P+ ++T LID GN++ AL ++
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E + D+ YT+ + + L QA F EM I P V I LLR + G
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 758
Query: 633 SLHE 636
L E
Sbjct: 759 QLDE 762
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
Q+ K DM+ AG+ P+ T++ +I+ G +E + LF +M + G P+ N L
Sbjct: 271 QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 330
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + + LF E KD +
Sbjct: 331 IDGYGKVGSLEEVASLFN-------------------------EMKDVGCV--------- 356
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
P TYN L+ C +A +EM+ GL PN ++++ LIDA
Sbjct: 357 -------------PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G ++GA+++ MR G+ P+ YT+ I ++ L +A+ L +M ++ N
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY LL + G + E ++ V++ M K G
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEE---VFRSMLKDG 494
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I E+++S+ ++ N + ++++ A L ++ MQ +GV A + +Y +L+
Sbjct: 552 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 611
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG LA + + + L L+ +V Y++++ + A K+ ++M
Sbjct: 612 DGLCKAGIVELAVDYFCRMLSLG----LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667
Query: 392 AGVTPNTI-----------------------------------TWSSLINACANAGLVEQ 416
G+TP+ ++SL++ + G + Q
Sbjct: 668 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 727
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
A F EM++ G P C LL+ + Q D A L
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 196/453 (43%), Gaps = 74/453 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + +
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ +MQKLG D +Y L+K C GN +A +++ E+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 351 -----------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ ++A+G++ DV +Y+T++ F + W+ A + +ML G
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T S LI+ G V +A L E ++Q GC + C L++ + +A
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583
Query: 454 RLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYS 503
+LF ++ + G GN +I+ HK+ S T+ N PN+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNI-KIALELHKNMLSDTSPYGINCKPNAISY 642
Query: 504 SF------------DKRFSFK--------PTTTTYNILMKACCTD--YYRVKALMNEMRT 541
S + R FK P +Y L+ C + K L NEM
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G+ P+ ++++LID G V A ++L++M + G P+ V YTT +K + R+ +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A LF +M+ P++VTY TL++ + G++
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNI 795
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 184/433 (42%), Gaps = 76/433 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--N 290
KK ++ A + + + ++ C T++ G+C + S+A L+ Q + N
Sbjct: 540 KKGKVIEANKLLEVVIQRGCILDVVTCTTLVK--GLCMKHRISKATQLFLKMQKLGCMPN 597
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQK------LGVMADMASYNILLKACCLAGNTVL 342
+ +LM + ++K LE++KNM + + SY+I++ C G
Sbjct: 598 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+E++ E+K L GV+ DV +Y++++ F + W+ A + +M+ GV P+ T+S
Sbjct: 658 ARELFKEMKAL---GVIP-DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LI+ G V +A L E M+Q GC PN+ L++ + A +LF
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM--- 770
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ P TY LM
Sbjct: 771 --------------------------------------------QKLGCLPDVVTYGTLM 786
Query: 523 KACC------TDYYRVKALMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQILKIM 574
K C T K ++++ G P+ IS++I+ID G + A ++ K M
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ P+V++YT+ I RS +L+ A LF EM +Q N VTY ++ + G +
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906
Query: 635 HEVQQCLAVYQDM 647
+ A++Q M
Sbjct: 907 DK-----ALFQKM 914
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 196/476 (41%), Gaps = 82/476 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ +MQKLG D +Y L+K C GN +A +++ E+
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 351 -----------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
K ++A+G++ DV +Y++++ F + W+ A + +ML G
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T LI+ G V +A L E M+ GC + + L++ + A
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290
Query: 454 RLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV-----PNSHYS 503
+LF S +A G G T +I+ H ++ + +T + P+ S
Sbjct: 291 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTS 350
Query: 504 SFDKRFSFKP--------------------TTTTYNILMKACCTDYYRVKA--LMNEMRT 541
S K TY+ L+K C ++ +A L M+
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMRED----GM--SPDVVAYTTAIKVCVR 595
+G P+ I++ L+ +GN+ ALQ+ + M D G+ P +++Y+ I +
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R +A LFEEMK I P++++Y TL+ G E +CL + +M G
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW-EKAKCL--FNEMLDVG 523
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 181/409 (44%), Gaps = 37/409 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P + IID G+C D + +R +++++++Q + ++ + SL++ H K+
Sbjct: 163 PTLISYSIIID--GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAK 220
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M +G+ D+ + +L+ C G + A E+ + H +G + LD+ TYST+
Sbjct: 221 CLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH---RGCI-LDIVTYSTL 276
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A ++ M G P+ I + +L+ G + A+HL +EML
Sbjct: 277 IKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336
Query: 430 EPNSQCCNILLQACVEACQFD---RAFRLFRSWTLSKTQVALGEDYD----GNTDRISNM 482
+ +C I + D + ++ + L + + G D + M
Sbjct: 337 QYGIKC--IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 394
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRV-----KALM 536
EH+ ++ T F+ ++ +P TY LMK C T + + ++
Sbjct: 395 EHRISEA---TWLFMSM-------QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 537 NEMRTVGLS--PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
N+ G+ P IS++I+ID + A ++ + M+ G+ PDV++YTT I
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
S + ++A LF EM IQP++ T L+ + G + E + L V
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 553
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 172/423 (40%), Gaps = 83/423 (19%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID+ G +++ + E + + L+I +++L+ H + ++
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-GV--LKLDVFTYST 368
+ +M+KLG D +Y L+K C G +A ++ E+ + ++ G+ ++ DV T S
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A ++ E M+ G + +T+S+LI + +A LF M + G
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 412
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P++ L++ + + A +L + +
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQ------------------------------E 442
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +T + KPT +Y+I++ C D +A L EM+ G+ P
Sbjct: 443 MLNDTGRY-----------GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP 491
Query: 547 NHISWT-----------------------------------ILIDACGGSGNVEGALQIL 571
+ IS+T +LID G V A ++L
Sbjct: 492 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+++ + G DVV TT +K R+ +A LF +M+ PN+VT TL++ +
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611
Query: 632 GSL 634
G++
Sbjct: 612 GNI 614
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 54/359 (15%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL--------KLDVFTY 366
M+ G+ D ++NIL+ C N E + + +G + + DV T
Sbjct: 1 MRLAGLFPDSFTFNILINCLC---NVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTS 57
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S ++ + A ++ E M+ G + +T+S+LI + +A LF M +
Sbjct: 58 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC P++ L++ + + A +L + +
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEM----------------------LNDTG 155
Query: 487 KQSITNTPNFVPNS--------HYSSFDKRFSFK--------PTTTTYNILMKACC--TD 528
+ I P + S + R FK P +Y L+ C
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGK 215
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + K L NEM VG+ P+ + +LID G V A ++L++M G D+V Y+T
Sbjct: 216 WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYST 275
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IK R+ +A LF MK +P+ + Y TL++ + G ++ L ++Q+M
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTG---KINIALHLHQEM 331
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 186/434 (42%), Gaps = 62/434 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
K L A + KK + PN + +I+ G C + RA + ++++ + N
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLIN--GFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++++++ K ++++ M + G M ++ +YN LL C G L E Y
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG---LMDEAYE 252
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L+ D F+Y T++ MALKV ED + P+ + +S+LI
Sbjct: 253 LLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG +++A LFE+M + CEP+ L+ C+ DR L + Q L
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG---LCKGDR---------LQEAQQVL 359
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-----------DKRFSFK----- 512
ME ++ TPN + YSS D + FK
Sbjct: 360 -----------ETMEDRN-----CTPNVIT---YSSLIDGLCKTGQVRDAQEVFKRMIVR 400
Query: 513 ---PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TYN L+ C AL M EM G P+ I++ LID +G A
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M+ +PDV+ Y+ I + +R+ A +LF++M + P++VT+ TL+
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 628 RSRYGSLHEVQQCL 641
G + + ++ L
Sbjct: 521 YCNAGLVDDAERLL 534
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 66/399 (16%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ ++ID G+C G ++ +++ + + + N+ +NSL++ + +
Sbjct: 368 TPNVITYSSLID--GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M G + D+ +YN L+ C G A ++G++K AK DV TYS
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AK-FCNPDVITYSC 481
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + MA + +DML V P+ +T+S+L+ NAGLV+ A L EEM+ +
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + A R+ + Q
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ----------------------- 578
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVG 543
P TY L+ A C T YR L+ EM G
Sbjct: 579 ------------------------PNVVTYTALIDAFCRAGKPTVAYR---LLEEMVGNG 611
Query: 544 LSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ LI G+G++E A +IL ++ R++ D+ AY + R+ R+ A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L E +K P Y+ L+R + L + + L
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 710
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 155/367 (42%), Gaps = 62/367 (16%)
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+T N++ + ++ + DL E+ + M++ G + D A YN ++ A C A NT A
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + + +E + +V T++ ++ A A M G PN T++
Sbjct: 114 LDYF---RSMECEK----NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNV 166
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LIN V +A L +EM ++G PN + ++ + D A++LFR
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR------ 220
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
Q + N PN V TYN L
Sbjct: 221 ------------------------QMVENGCMPNLV-------------------TYNTL 237
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + +A L++EMR GL P+ S+ L+ +G ++ AL++ +
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVVAY+T I ++ RL +A LFE+M+ +P++VT+ L+ + L E QQ
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 640 CLAVYQD 646
L +D
Sbjct: 358 VLETMED 364
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V+TY+ + + A+ + ++ G+TPN T++ +I +G +++A L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG--NTDRI 479
EEM ++G P++ N ++ A +A +A FRS K + DG +R+
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMN 537
++++ K+ + P TYN+L+ C + +R L+
Sbjct: 143 PE----------------ATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLK 185
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM+ GL+PN ++++ +I V+ A ++ + M E+G P++V Y T + R+
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +A+ L +EM+ +QP+ +Y TL+ + G ++ L V++D
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG---KIDMALKVFED 291
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 179/441 (40%), Gaps = 75/441 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNA 302
+PN++ +I G+C GD K+ + E++R + ++N +++ A
Sbjct: 56 TPNVFTYAVVIQ--GLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 303 HDLKFTLEVYKN--------------------------MQKLGVMADMASYNILLKACCL 336
D ++E KN M+K G + + +YN+L+ C
Sbjct: 114 LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
Y +K ++ G L +V TYST++ F A K+ M+ G P
Sbjct: 174 VHKV---HRAYLLLKEMKESG-LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 229
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++L++ GL+++A L +EM + G +P+ + L+ + + D A ++F
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 457 RSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ ++ + + G G D + K +++
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN------------------- 330
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
S +P T+ LM C + ++ M +PN I+++ LID +G V
Sbjct: 331 -SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 389
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ K M G+ P+VV Y + I + + A L EEM P+++TY TL+
Sbjct: 390 AQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID 449
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
+ G E + ++ DM
Sbjct: 450 GLCKTGRAPEANR---LFGDM 467
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 42/237 (17%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++D+ Q V ++ F++L+ NA + + + M D+ +Y L+
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G V A+ + +K + +G + +V TY+ ++ F A +A ++ E+M+
Sbjct: 555 GFCKVGRMVEARRV---LKRMAKRGC-QPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 393 GVTPNTITWSSLINACANAGLVEQA----------------------------------- 417
GV PN IT+ SLI G +E+A
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 418 -MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+ L E + Q+G P L++ + + +A + TLS+ E Y+
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYE 727
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + V F K +V A R K PN+ +ID G + + E++
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNT 340
V N+ + SL+ DL+ ++ + +++ ADM +Y +++ C G
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTI 399
A E+ +K ++ + D+ Y +++ K A++V E+M LS PN
Sbjct: 669 SAALELLEAIK--QSGTPPRHDI--YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 724
Query: 400 TWSSLINACANAGLVEQAMHLFEEML 425
+ ++I A G E+A L +E+L
Sbjct: 725 AYEAVIQELAREGRHEEANALADELL 750
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 40/423 (9%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
KK + N Y+C I++ CGD ++ +++++ S + NI ++ +++ + +F
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+++ M+ G+ D+ YN ++ C AG +E + + AKG LK +V+T
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM---EEGKSYLVEMIAKG-LKPNVYT 549
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y + + A Q A + +ML +G+ PN + + LI+ G +A F ML
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--- 482
G P+ Q ++L+ + + A +F S L K V D T ISN+
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVF-SELLDKGLVP---DVFTYTSLISNLCKE 665
Query: 483 --------EHKDKQSITNTPNFVPNS----------HYSSFDKRFSFKP------TTTTY 518
H D PN V + + + F P + TY
Sbjct: 666 GDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ ++ C +A L + M+ VG+ P+ + LID C +GN E AL + M E
Sbjct: 726 STIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G++ A+ I + +L +A+ L E+M I PN VTY L+ G++ E
Sbjct: 786 EGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKE 844
Query: 637 VQQ 639
+Q
Sbjct: 845 AEQ 847
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 189/434 (43%), Gaps = 69/434 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ + + ++ +A R++ +PN IC +ID G C D ++A +
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLID--GYCKDGNTTKAFAK------ 604
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
++ M GV+ D+ ++++L+ L+ N L QE
Sbjct: 605 -------------------------FRCMLDQGVLPDVQTHSVLIHG--LSKNGKL-QEA 636
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
G L KG++ DVFTY++++ + A ++ +DM G+ PN +T+++LIN
Sbjct: 637 MGVFSELLDKGLVP-DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL----- 461
G + +A LF+ + + G NS + ++ ++ AF+LF L
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 462 -SKTQVAL--GEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S AL G GNT++ +S ++ I +TP F + D F
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAF-----NALIDGFFKLGKLIEA 810
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y L+ +M ++PNH+++TILI+ GN++ A Q+ M++
Sbjct: 811 YQ---------------LVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ P+V+ YT+ + R R + FSLF+EM I+P+ + + ++ A + G+
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW--- 912
Query: 638 QQCLAVYQDMWKAG 651
+ L + DM G
Sbjct: 913 IKALKLVDDMLSEG 926
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 161/389 (41%), Gaps = 53/389 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I+ G + + + D+ + N+ ++ ++ A D+ LE+
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++M G++ D Y L+ C + + + E+ + LK D Y+ ++
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG----LKPDHVAYTALIN 345
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A +VKE+M + + NT T+ +LI+ G +E+A LF EM G +P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ Q N L++ + ++A+ L +E K +
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELL-------------------------IEIKKE---- 436
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-CTDYYRVKALMNEMRTVGLSPNHIS 550
N N++ I+ C C D R L EM + GL PN +
Sbjct: 437 ---NLTANAYMCG--------------AIVNGLCHCGDLTRANELFQEMISWGLKPNIVI 479
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T ++ G E A++IL +M++ G+SPDV Y T I ++ ++++ S EM
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++PN+ TY + R G + ++
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAER 568
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 168/383 (43%), Gaps = 25/383 (6%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ + +++ +N+T N Y+ +++N H DL E+++ M G+ ++ Y ++
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K G A +I G +K +G L DVF Y+T++ F A + +M++
Sbjct: 485 KGLVKEGRFEEAIKILGVMKD---QG-LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIA 540
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN T+ + I+ AG ++ A F EML +G PN C L+ + +
Sbjct: 541 KGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTK 600
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFS 510
AF FR Q L D ++ I + K Q + + DK
Sbjct: 601 AFAKFRCML---DQGVL-PDVQTHSVLIHGLSKNGKLQEAMGVFSEL-------LDK--G 647
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY L+ C D L ++M G++PN +++ LI+ G + A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + E G++ + V Y+T I +S L +AF LF MK + P+ Y L+
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ ++ L+++ M + G
Sbjct: 768 CKAGN---TEKALSLFLGMVEEG 787
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 166/385 (43%), Gaps = 39/385 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++ +L + + +++ + SL++ DLK E++ +M K G+ ++ +Y
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G A+E++ + KG+ + V TYSTI+ + + A ++
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPE---KGLARNSV-TYSTIIAGYCKSANLTEAFQLFH 746
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M GV P++ + +LI+ C AG E+A+ LF M++ G ++ N L+ +
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLG 805
Query: 448 QFDRAFRLFRSW-----TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ A++L T + + +Y I E +
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL----------------F 849
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILID 556
KR + P TY L+ Y R+ +L +EM G+ P+ ++W++++D
Sbjct: 850 MEMQKR-NVMPNVLTYTSLLHG----YNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A GN AL+++ M +G++ YT I + L + + +E++ +
Sbjct: 905 AHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKL 964
Query: 617 NLVTYITLLRARSRYGSLHEVQQCL 641
+L T TL+ R G E + L
Sbjct: 965 SLATCGTLVCCFHRAGRTDEALRVL 989
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 32/295 (10%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++ KV + ML A + P+ T+++LINA G VE+ H+ +M + GC PN +++
Sbjct: 215 ELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVV 273
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDY------DGNTDRISNMEHKDKQSITNT 493
+ A D A L RS + L ++Y DG + + E K T
Sbjct: 274 IAGLCRAGDVDEALELKRSMA---NKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330
Query: 494 PNFVPNS-HYSSFDKRF-------------------SFKPTTTTYNILMKACCT--DYYR 531
P+ Y++ F K T TY L+ C D +
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEK 390
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ L +EM +G+ P+ ++ LI+ N+E A ++L ++++ ++ + +
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L +A LF+EM + ++PN+V Y T+++ + G E + L V +D
Sbjct: 451 GLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASY 327
G +++ + ED+ ++T N + L+ + ++K +++ MQK VM ++ +Y
Sbjct: 805 GKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LL G E++ + A+G+ K D +S +V W ALK+ +
Sbjct: 865 TSLLHGYNRIGRR---SEMFSLFDEMVARGI-KPDDLAWSVMVDAHLKEGNWIKALKLVD 920
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DMLS GV ++ LI+A + + + + +E+ + G + + C L+ A
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAG 980
Query: 448 QFDRAFRLFRSWTLS 462
+ D A R+ S S
Sbjct: 981 RTDEALRVLESMVRS 995
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 202/437 (46%), Gaps = 28/437 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL A + K+ +P++ ++ID G G + I+E ++ + ++
Sbjct: 68 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 127
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N + E M+ G+ ++ +Y+ + A C G A + + ++
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + FTY++++ A ALK+ E++L AG+ N +T+++L++
Sbjct: 188 RRV----ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVA 467
G +++A +F ML AG PN + L+ ++A + + A + + + +
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 468 LGEDYDG--NTDRISNME---HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
G G N R+ + + K+S NT + + + D F T +L
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI---YTTLMDAYFKSGQATEALTLLE 360
Query: 523 KA-------CCTDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ C + + V K L +EM G+ P+ I++T LID GN++ AL + M
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E GM D+ AYT I S ++++A +L +EM + P+ V Y+ L++ +Y +L
Sbjct: 421 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK---KYYAL 477
Query: 635 HEVQQCLAVYQDMWKAG 651
+V + L + +M K G
Sbjct: 478 GKVDEALELQNEMAKRG 494
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 174/416 (41%), Gaps = 59/416 (14%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VY 312
Y+C+ GD +R+++ ++ T +I +NSL ++ H L+ ++
Sbjct: 65 YLCKE--------GDLEMARSLFTQMKEAGFTPDIVTYNSL--IDGHGKLGLLDECICIF 114
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M+ D+ +YN L+ C A E E+K A G LK +V TYST +
Sbjct: 115 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK---ANG-LKPNVVTYSTFIDA 170
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F Q A+K DM +TPN T++SLI+A AG + +A+ L EE+LQAG + N
Sbjct: 171 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSI 490
LL E + A +FR+ L N + + + H + +
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAM--------LNAGVAPNQETYTALVHGFIKAKEM 282
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
+ + K KP Y ++ C + K L+ E++ G++ N
Sbjct: 283 EYAKDILKEM------KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 336
Query: 549 ISWTILIDACGGSGNVEGALQILK-----------------------IMREDGMSPDVVA 585
+ +T L+DA SG AL +L+ M + GM PD +A
Sbjct: 337 VIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 396
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YT I ++ L++A +L + M ++ +L Y L+ S G + + + L
Sbjct: 397 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 452
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 53/320 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M+K V S N LL G L+++ + K + A G+ K VFTY+ +
Sbjct: 7 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF---KDMGAAGI-KRSVFTYNIM 62
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +MA + M AG TP+ +T++SLI+ GL+++ + +FE+M A C
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ C C+F+R + F H+ K +
Sbjct: 123 DPDVITYNALIN-CF--CKFERMPKAFEFL------------------------HEMKAN 155
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
KP TY+ + A C + +A+ +MR V L+PN
Sbjct: 156 --------------------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 195
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T LIDA +GN+ AL++++ + + G+ +VV YT + R+K+A +F
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M + + PN TY L+
Sbjct: 256 AMLNAGVAPNQETYTALVHG 275
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
K + TYNI++ C D ++L +M+ G +P+ +++ LID G G ++
Sbjct: 51 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 110
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ I + M++ PDV+ Y I + +R+ +AF EMK ++PN+VTY T + A
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170
Query: 628 RSRYGSLHEVQQCLAVYQDMWK 649
+ G L Q+ + + DM +
Sbjct: 171 FCKEGML---QEAIKFFVDMRR 189
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 208/523 (39%), Gaps = 105/523 (20%)
Query: 114 EMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKL 157
+M A+GI +S+ +EG ++ + ++ E G P L DG G
Sbjct: 46 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 105
Query: 158 LKNEC----QRLLDSG---EVEMFVGLMEVLEEF-RLPVK-ELDEEFRIVQLCVNKPDVN 208
L +EC +++ D+ +V + L+ +F R+P E E + L KP+V
Sbjct: 106 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL---KPNV- 161
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
+ + F+ F K+ L A++ + ++ +PN + ++ID
Sbjct: 162 -------------VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMAS 326
G+ ++ + E++ + LN+ + +L++ + +K EV++ M GV + +
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 268
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y L+ A A++I E+K + +K D+ Y TI+ + + A +
Sbjct: 269 YTALVHGFIKAKEMEYAKDILKEMK----EKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ +G+ N + +++L++A +G +A+ L EEML +++ C
Sbjct: 325 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML-----------DLVDGLCKNN 373
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C F+ A +LF L K + Y D NM+H + Q N
Sbjct: 374 C-FEVAKKLFDEM-LDKGMMPDKIAYTALID--GNMKHGNLQEALN-------------- 415
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
L + M +G+ + ++T LI SG V+
Sbjct: 416 ----------------------------LRDRMIEIGMELDLHAYTALIWGLSHSGQVQK 447
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +L M G+ PD V Y IK ++ +A L EM
Sbjct: 448 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 490
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +M G+ + ++ I+ID G++E A + M+E G +PD+V Y + I
Sbjct: 41 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 100
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL-------RARSRYGSLHEVQ 638
+ L + +FE+MK P+++TY L+ R + LHE++
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 153
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+MR + P S L+ G + + + K M G+ V Y I +
Sbjct: 11 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 70
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L+ A SLF +MK P++VTY +L+ + G L E C+ +++ M A
Sbjct: 71 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE---CICIFEQMKDA 120
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 267 GICGDYMKSRAI------YEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKL 318
G+ D +K+ + Y + NV ++Y + L+N + A + K + M++
Sbjct: 206 GLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEK 265
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +YN+++ C AG E + E+K L K L DVFTYS ++ F K
Sbjct: 266 GCSPSLVTYNVVIGGLCRAGEV---DEAF-ELKKLMDKKGLVADVFTYSILIDGFGKQKR 321
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + E+M S G+ P + +++LI+ G +A + EEML G + N N
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNA 381
Query: 439 LLQACVEACQFDRAFRLFRSWTL------SKTQVALGEDY--DGNTDRISNMEHKDKQSI 490
L++ + ++A L + ++T + E Y + NT R+ ++ + K+S
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS- 440
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLS 545
N VP T T +++ C D RV +M ++G+
Sbjct: 441 ----NLVP---------------TAYTCGMIINGLCRHGSIEDASRVFEIM---VSLGVK 478
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + +T LI G + A++ILK+M + G+ PDV+ Y + I +S+++++A
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM ++PN+ TY L+ + G E+Q +++M G
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSG---EMQVADRYFKEMLGCG 581
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 188/412 (45%), Gaps = 44/412 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN+Y +I G C G+ + ++++ + N V +L++ + T
Sbjct: 549 PNVYTYGALIH--GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M V D+ +Y+ L+ G A E+ E LE KG++ DVFTY++I
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF--LE-KGLVP-DVFTYNSI 662
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M G++PN IT+++LIN AG +E+A LF+ + G
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGL 722
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDRISN 481
N+ ++ ++ +AFRLF TL + + G +GNT++ +
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS 782
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
+ S K F+ +T++ N LM C ++A L+ +M
Sbjct: 783 L------------------FLESVQKGFA---STSSLNALMDGFCKSGKVIEANQLLEDM 821
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ P+H+++TILID +G ++ A Q M++ + P+ + YT + + R
Sbjct: 822 VDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR 881
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ F+LF+EM I+P+ VT+ ++ A + G + + L + DM K G
Sbjct: 882 SEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG---DHVKTLKLVDDMLKKG 930
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 184/471 (39%), Gaps = 99/471 (21%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
+DL+S + KK P Y C II+ G+C G + ++E + S V N
Sbjct: 431 KDLLSEM------KKSNLVPTAYTCGMIIN--GLCRHGSIEDASRVFEIMVSLGVKPNAV 482
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ +L+ + + +F + + K M K GV D+ YN ++ C + A++ E+
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+G LK +V+TY ++ + + Q+A + ++ML G+ PN + ++LI+
Sbjct: 543 IE---RG-LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +A +F ML P+ + + L+ + + A L + L K V
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF-LEKGLV---- 653
Query: 471 DYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRF---------------SFKPT 514
P+ F NS S F K+ P
Sbjct: 654 -----------------------PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN L+ C + R + L + + GL+ N +++ +ID SGN+ A ++
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF-------------------------- 606
M G+ PD Y+ I C + ++A SLF
Sbjct: 751 EMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGK 810
Query: 607 --------EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
E+M ++P+ VTY L+ + G L E +Q + DM K
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ---FFVDMQK 858
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 42/259 (16%)
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + LI+ GL ++A+ F + G CCN LL ++A + + +R
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRF--- 223
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD----KRFSFK-- 512
Y+G + +N+ H T + N+H+ + + KR F+
Sbjct: 224 -------------YNGMLE--ANVLHD-----VYTYTHLINAHFRAGNAKEGKRLLFEME 263
Query: 513 -----PTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P+ TYN+++ C + + +K LM++ GL + +++ILID G
Sbjct: 264 EKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKK---GLVADVFTYSILIDGFGKQK 320
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
A +L+ M G+ P VAYT I +R +AF + EEM ++ NL TY
Sbjct: 321 RCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380
Query: 623 TLLRARSRYGSLHEVQQCL 641
L++ ++G + + L
Sbjct: 381 ALVKGVCKFGDMEKADALL 399
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/456 (18%), Positives = 171/456 (37%), Gaps = 106/456 (23%)
Query: 253 SPNMYICRTIIDVCGICGDY-----------MKSRAIYEDLRS----------------- 284
+PN +C +ID G C + M R+++ D+R+
Sbjct: 583 APNDVVCTALID--GYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 285 ---------QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + +++ +NS+++ + ++++ M + G+ ++ +YN L+
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG A+E++ + KG L + TY+TI+ + + A ++ ++M G
Sbjct: 701 LCKAGEIERARELFDGIP---GKG-LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P++ +S+LI+ C G E+A+ LF E +Q G S N L+ ++ + A
Sbjct: 757 VPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEAN 815
Query: 454 RLFRSWTLSKTQ-----VALGEDYDGNTDRISNMEH--KDKQSITNTPNFVP-------- 498
+L + + DY T + E D Q PN +
Sbjct: 816 QLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY 875
Query: 499 ------NSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKAL--------------- 535
+ ++ FD+ + +P T+++++ A + VK L
Sbjct: 876 NMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK 935
Query: 536 ----------------------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ ++ GL+ + + + L+ +G ++GA ++LK
Sbjct: 936 NVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKS 995
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M PD I V S + A ++M
Sbjct: 996 MVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K +L A R +D P+ ++ +ID C G+ K+ +++ +
Sbjct: 727 VTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE 786
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
Q + N+LM+ K ++ ++M V D +Y IL+ C G
Sbjct: 787 -SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++ + +++ K L + TY+ ++ + A + ++M++ + P+ +
Sbjct: 846 LKEAEQFFVDMQ----KRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGV 901
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
TWS +I+A G + + L ++ML+ G + C++L+
Sbjct: 902 TWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLI 942
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 31/437 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKH-LSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF ++ D ALR + ++H PN ++ +I + G G K+ ++ED+
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + + +L + M++ V ++ +YN ++ AC G
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGG-- 158
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ + + G + +G+ + D+ TY+T++ + + A V M AGV P++IT
Sbjct: 159 LEWEGLLGLFAQMRHEGI-QPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSIT 217
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW- 459
+++L++ A E L EM QAG P+ NIL++A A ++ A ++F+
Sbjct: 218 YNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
Query: 460 ---------TLSKTQVALGED--YDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYS 503
T S A G+ YD ++M+ + + NT N F +
Sbjct: 278 EAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQ 337
Query: 504 SFDKRF------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
F +P +TY L+ +C + K + M ++P +T LI
Sbjct: 338 ESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLI 397
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A M+E G PD+ Y I +A S + M I
Sbjct: 398 TAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGIS 457
Query: 616 PNLVTYITLLRARSRYG 632
++ TY +L+ A R G
Sbjct: 458 ADVSTYNSLIEAFGRGG 474
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 32/292 (10%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQA 417
++ +V++++ ++ + + +L + M VTPN IT++++INACA GL E
Sbjct: 105 VEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGL 164
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKTQVALGED 471
+ LF +M G +P+ N LL AC + A +FR+ S T AL +
Sbjct: 165 LGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDI 224
Query: 472 YDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TD 528
Y G DR + ++ + N P+ V YNIL++A
Sbjct: 225 Y-GQADRHEGVGELLREMEQAGNAPDVV-------------------AYNILIEAYGRAG 264
Query: 529 YYRVKALM-NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
YR A M +M+ G +P+ ++++ L++A G G + + M+E G PDV Y
Sbjct: 265 KYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYN 324
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
T I+V + +++ +LF ++ ++P++ TY LL + + G LH+ +
Sbjct: 325 TLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGK-GGLHKAAK 375
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 40/295 (13%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
KL + +S I + FA WQ AL++ + M PN ++ +I G++++A
Sbjct: 35 KLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKAS 94
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL---------- 468
LFE+M E N L+ A Q + + L K L
Sbjct: 95 ELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINAC 154
Query: 469 ---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
G +++G + M H+ Q P TYN L+ AC
Sbjct: 155 AKGGLEWEGLLGLFAQMRHEGIQ------------------------PDIITYNTLLSAC 190
Query: 526 CTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ +A M M G+ P+ I++ L+D G + EG ++L+ M + G +PDV
Sbjct: 191 SSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDV 250
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
VAY I+ R+ + + A +F++M+ P++VT+ TLL A ++G EV+
Sbjct: 251 VAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVR 305
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY- 312
P+M ++ CG G + ++ I+ + VT F L+ + ++ Y
Sbjct: 353 PDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYA 412
Query: 313 -KNMQKLGVMADMASYNILLKA------CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+M++ G D+ +YN L+ A C AG+ L G + DV T
Sbjct: 413 FNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEG----------ISADVST 462
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+++++ F + A++ DM A +PN T+ +L+ AGL ++A F ++
Sbjct: 463 YNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQ 522
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G P+ +LL C ++D A ++
Sbjct: 523 VGGELPSVDSYCLLLSVCARRNRWDDASKVL 553
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 215/501 (42%), Gaps = 58/501 (11%)
Query: 176 GLMEVLEEF--RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL-----FCNFV 228
G++ +E R+PV+ L ++ + D+ A R+ + RA + + +FV
Sbjct: 57 GMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFV 116
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC----GICGDYM--KSRAIYEDL 282
+ + A R + L P RT G+CG M ++ A++ +
Sbjct: 117 LGYCRTGLFAHACRLF------LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM 170
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ +V++ +++ A + + + G + ++A YN L+ C G+
Sbjct: 171 WPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDL 230
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA +I+ K +++KG L +V TY+ ++ F + + A+ + M+ AG+ PN +T
Sbjct: 231 ELAIDIF---KGMQSKGCLP-NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVT 286
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LI + G +E A L M G PN C +L+ A + + + A + S
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346
Query: 461 ---LSKTQVALGEDYD-----GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ QV D G D N+ K T FVP++H
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQK-----IITEGFVPDAH----------- 390
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ C + ++A L+N+M G+ N + +TILID + I
Sbjct: 391 ----MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ PDVV YT I+ + R++ A S+ +M + ++PNL TY TL++
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG--- 503
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
Y +L V Q + ++M G
Sbjct: 504 YANLGLVSQAFSSLKNMIDNG 524
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+PN + C +ID G +++ L + + +N ++ S+++ KF +
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD-GAH 374
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEV-----------------KH 352
MQK+ G + D Y+ L+ C + A + ++ KH
Sbjct: 375 NLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKH 434
Query: 353 LE--------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
L A +K DV TY+ ++ + + A + M+ GV PN
Sbjct: 435 LREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL 494
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
T+++LI AN GLV QA + M+ GC+PN + +LL
Sbjct: 495 TTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 201/481 (41%), Gaps = 43/481 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRAD------------------ILFCNFVREFGKKR 235
EF V +C N N+ I + C + R I + V + +
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 354
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 411
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 412 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 520
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 695
Query: 651 G 651
G
Sbjct: 696 G 696
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 36/398 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 253 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 426
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +EM +QP +VT+ L+ +G L + ++ L
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 519 NILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N+ + D Y+ + E VG+ N S+ I+I G ++ A +L +M
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G +PDV++Y+T + R L + + L E MK ++PN Y +++ R L
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 636 EVQQCLA 642
E ++ +
Sbjct: 334 EAEEAFS 340
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 126/547 (23%), Positives = 227/547 (41%), Gaps = 60/547 (10%)
Query: 115 MVASGIVKSIREGRID--CVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
V+ +V + ID CV ++ K EL A E F + + R ++ GEVE
Sbjct: 199 FVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMRE----QPFSVYEFVMNRFMNKGEVE 254
Query: 173 MFVGLMEVLEE--FRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIV----PRADIL-FC 225
M + + L + F L + ++ + + + + D+ +A Y +V P+ +++ F
Sbjct: 255 MGLRFHKALVQGGFGLDIITCNKILKGIWM---QNDIGVADDYFNMVVRIGPKPNVVTFS 311
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
+ + K+ +L A +D + +P++ + +ID G + + +
Sbjct: 312 TLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK 371
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ L++ F+S M+ V DL +++YK M G+ ++ S +IL+K C G + A
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEA 431
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ ++ L + + TYS ++ F + + + EDM+ P+TI +S
Sbjct: 432 CGLFVQILKLG----FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------- 456
LIN GLV A+ F + + G PN N LL + A +++
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 457 -RSWTLSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
++ T++ T + G G D M KD F
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKD------------------------F 583
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TY L+ C L + M ++P+ + +LI+ G++E AL
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALG 643
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + E G PDV + T I KRL A LF +M Q++PN +T+ L+ A
Sbjct: 644 LFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703
Query: 630 RYGSLHE 636
R G + +
Sbjct: 704 REGRMDD 710
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 47/422 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL ++ Y SPN+ C +I G C G +++ ++ + +
Sbjct: 389 KIGDLGRVIQIYKRMLNEGISPNVVSCSILIK--GFCQNGRILEACGLFVQILKLGFEPS 446
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +++L+ + +L+ +Y++M K D Y++L+ C Q + G
Sbjct: 447 ILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLC-------KQGLVG 499
Query: 349 EVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + V L +VFT +T++ F K A+KV M + +T+T++ LI
Sbjct: 500 DALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN--SQCCNI-----LLQACVEACQFDRAFRLFRS 458
A G V++A+ LF +ML+ +P+ + C I L ++ C FD F
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFD-----FMC 614
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+A+ + + NM ++ FV KP T+
Sbjct: 615 KNAVAPDIAI-------YNVLINMHSREGHLEAALGLFVHVVERGP-------KPDVFTF 660
Query: 519 NILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N M C ++ R+ L +M + L PN I++TILIDA G ++ A+ + M
Sbjct: 661 NT-MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKML 719
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQA-FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G P++V Y+ I +S+ + ++ L+ EM I PN+V+Y L+ + G +
Sbjct: 720 EEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLM 779
Query: 635 HE 636
E
Sbjct: 780 KE 781
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 45/407 (11%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMKSRAIYEDLRS 284
+ F K +L Y+ K P+ + +I+ +C G+ GD ++ + +
Sbjct: 454 IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR---FFFQAVN 510
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ N++ N+L++ + ++VY M L + AD +Y IL+K G
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ ++ K K DV TY T++ K L + + M V P+ ++
Sbjct: 571 ALMLFFQM----LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYN 626
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-- 460
LIN + G +E A+ LF +++ G +P+ N ++ + D A +LF T
Sbjct: 627 VLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSE 686
Query: 461 -LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + D R+ + + + P +P T
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGP-----------------EPNLVT 729
Query: 518 YNILMKACCTDYYRVKALM-------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y+ L+ Y++ +++M NEM ++PN +S++ILID G ++ A
Sbjct: 730 YSCLIHG----YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCA 785
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + + PDV+AYT I+ + RL +A L++ M ++ P+
Sbjct: 786 FRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 40/179 (22%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP T++ L+ A C + KA L + M G++P+ I ++ILID +G +E
Sbjct: 300 RIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLE 359
Query: 566 GA-----------------------------------LQILKIMREDGMSPDVVAYTTAI 590
+QI K M +G+SP+VV+ + I
Sbjct: 360 DGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILI 419
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
K ++ R+ +A LF ++ +P+++TY L+ + G+L + +Y+DM K
Sbjct: 420 KGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRD---GFYLYEDMIK 475
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
N + +G PN ++++ LIDA GN++ A + +M +G++PD++ Y+ I +
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ RL+ L I+ ++V + + + A + G L V Q +Y+ M G
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQ---IYKRMLNEG 407
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I +C + K + + L +D K+ +P++ I +I++ G + ++
Sbjct: 588 ITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVH 647
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +++ FN+++ N L ++++ M + + ++ IL+ A C G
Sbjct: 648 VVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGR 707
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ K LE + ++ TYS ++ F + LK+ +ML + PN
Sbjct: 708 MDDAMLMFS--KMLEEGP--EPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNI 763
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++S LI+ GL+++A F L P+ IL++ + + A L+ +
Sbjct: 764 VSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDN 823
Query: 459 WTLSK 463
L++
Sbjct: 824 MLLNR 828
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 184/388 (47%), Gaps = 23/388 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ + + L+ + +L+ + +
Sbjct: 53 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 112
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ AG A I+ K +EA+G+ +V YS ++
Sbjct: 113 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF---KSMEARGLAPNEVV-YSALI 168
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G VE A F+EML+AGC+
Sbjct: 169 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK 228
Query: 431 PNSQCCNILLQACVEACQFDRA-FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ NIL+ +A D A L + T++ + + Y D ++ K +++
Sbjct: 229 PDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI-HTYTAIVDWLAK-NKKIEEA 286
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSP 546
+ N PT TYN L+ C R++ ++ +R + G +P
Sbjct: 287 VALMEKITAN----------GCTPTIATYNALLNGLC-KMGRLEEAIDLLRKIVDNGCTP 335
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++T LID G A ++ K M G++ D V YT I+ +++ ++ QA S++
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ M + P++VT T++ S+ G +
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRI 423
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/547 (21%), Positives = 222/547 (40%), Gaps = 65/547 (11%)
Query: 125 REGRIDCVVGVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEV 171
+ GR++ + +L+K+ + G P L DG G +KL K R L V
Sbjct: 33 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
+ E+L+ ++P + CV PDV + +
Sbjct: 93 CYTALIRELLQTGKIPQASSVYKTMTSHGCV--PDV--------------VTLSTMIDGL 136
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI------YEDLRSQ 285
K + +A+R + + + +PN + +I G+C K+R + ++
Sbjct: 137 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH--GLC----KARKMDCALEMLAQMKKA 190
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
T + +N L++ + D++ + M + G D+ +YNIL+ C AGNT A
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + +D+ TY+ IV A K + A+ + E + + G TP T+++
Sbjct: 251 SHSLAQETTING---CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+N G +E+A+ L +++ GC P+ L+ + + A++LF+ L
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR- 366
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
L D T I + K ++ SH D +T + L K
Sbjct: 367 ---GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD----VVTLSTMIDGLSK 419
Query: 524 ACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A R+ A + M GL+PN + ++ LI + ++ AL++L M++ +
Sbjct: 420 A-----GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD + Y I +S ++ A + F+EM +P++ TY L+ + G+
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN---TDAA 531
Query: 641 LAVYQDM 647
V+ DM
Sbjct: 532 CGVFDDM 538
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 185/465 (39%), Gaps = 63/465 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + +RE + + A Y H P++ T+ID G + I++
Sbjct: 92 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 151
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N V+++L++ A + LE+ M+K D +YN+L+ C +G+
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211
Query: 340 TVLAQEIYGEVKHLEAK-----------GVLK---------------------LDVFTYS 367
A+ + E+ K G K +D+ TY+
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
IV A K + A+ + E + + G TP T+++L+N G +E+A+ L +++
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDY--DGNTDRI 479
GC P+ L+ + + A++LF+ L + AL + G +
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391
Query: 480 SNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRFSFKPTTTTYNILM 522
S++ +K S P+ V S + S + R P Y+ L+
Sbjct: 392 SSV-YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALI 449
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C AL + +M+ +P+ I++ ILID SG+VE A M E G
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
PDV Y I ++ A +F++M + N+VTY L+
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALI 554
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 143/365 (39%), Gaps = 56/365 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ E + + T I +N+L+N L+ +++ + + G D+ +Y L+
Sbjct: 7 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG- 65
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G + E Y K + +G L LD Y+ +++ A V + M S G
Sbjct: 66 --LGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T S++I+ + AG + A+ +F+ M G PN + L+ +A + D A
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ K+ P
Sbjct: 183 MLAQM-----------------------------------------------KKAFCTPD 195
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL- 571
T TYN+L+ C D +A +EM G P+ ++ ILI +GN + A L
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ +G + D+ YT + ++K++++A +L E++ P + TY LL +
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315
Query: 632 GSLHE 636
G L E
Sbjct: 316 GRLEE 320
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 16/264 (6%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + E + + G TP T+++L+N G +E+A+ L +++ GC P+ L+
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + A++LF+ L L D T I + K ++ SH
Sbjct: 65 GLGKEKRSFEAYKLFKEMALR----GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDAC 558
D +T + L KA R+ A + M GL+PN + ++ LI
Sbjct: 121 GCVPD----VVTLSTMIDGLSKA-----GRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+ ++ AL++L M++ +PD + Y I +S ++ A + F+EM +P++
Sbjct: 172 CKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV 231
Query: 619 VTYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G+ LA
Sbjct: 232 YTYNILISGFCKAGNTDAASHSLA 255
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + +RE + + A Y H P++ T+ID G + I++
Sbjct: 373 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 432
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ + N V+++L++ A + LE+ M+K D +YNIL+ C +G+
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + E+ LEA K DV+TY+ ++ F A A V +DM S+ + N +
Sbjct: 493 VEAARAFFDEM--LEAG--CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVV 548
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T+ +LI+ + +A F+ M + G
Sbjct: 549 TYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM ++ G +P ++ L++ G +E A+ +L+ + ++G +PDVV YT+ I
Sbjct: 7 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 66
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ KR +A+ LF+EM + + V Y L+R + G ++ Q +VY+ M G
Sbjct: 67 GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG---KIPQASSVYKTMTSHG 121
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 203/481 (42%), Gaps = 43/481 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPR-----------------ADIL-FCNFVREFGKKR 235
EF V +C N N+ I + C + R D++ + V + +
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 797
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 854
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 855 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 963
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 1138
Query: 651 G 651
G
Sbjct: 1139 G 1139
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 36/398 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 636 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 695
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 696 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 869
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +EM +QP +VT+ L+ +G L + ++ L
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 519 NILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N+ + D Y+ + E VG+ N S+ I+I G ++ A +L +M
Sbjct: 657 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 716
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G +PDV++Y+T + R L + + L E MK ++PN Y +++ R L
Sbjct: 717 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 776
Query: 636 EVQQCLA 642
E ++ +
Sbjct: 777 EAEEAFS 783
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 182/402 (45%), Gaps = 56/402 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+DA ++ +I G ++ + E ++ + +N++++
Sbjct: 217 ARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVID 276
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + + D ++N LL AC AG+ A+ ++ E+ HL
Sbjct: 277 ACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHL--- 333
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + D++TY+T + ++A++V DM + V PN +T+S+LI+ + ++
Sbjct: 334 GIGR-DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDE 392
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+E+M G + + C N +L V+A ++ ++A+ D
Sbjct: 393 ALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYG--------------EIAIVCD----- 433
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKA 534
E +D S +K T TYN L+ V
Sbjct: 434 ------EMED----------------SGIEK------DTVTYNSLINGYGKQGRLDIVSF 465
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ PDVV +++ I
Sbjct: 466 LVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLA 525
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ A SL +M I+PN+VTY T++ A + L E
Sbjct: 526 KNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 37/319 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF S ++ +A + A+ V E M AG+ P T+T++++I+AC G+ + + F
Sbjct: 233 VFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYF 292
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDR 478
+ML+ P+ + N LL AC A + A LF + +G D Y+ D
Sbjct: 293 RQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFD----EMIHLGIGRDIYTYNTFIDA 348
Query: 479 I---SNMEHK-----DKQSITNTPNFVPNS----HYS---SFDKRFSFKPTTTTYNILMK 523
I N+E D ++ PN V S YS +D+ + I +
Sbjct: 349 ICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLD 408
Query: 524 ACCTD-----------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
C + Y + + +EM G+ + +++ LI+ G G ++ +++
Sbjct: 409 RVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQ 468
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
MR G++P V+ Y+T I + ++ AF+++ + K ++P++V + + + ++ G
Sbjct: 469 DMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNG 528
Query: 633 SLHEVQQCLAVYQDMWKAG 651
V+ L++ DM + G
Sbjct: 529 L---VEWALSLLNDMTEMG 544
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 162/394 (41%), Gaps = 84/394 (21%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
++Y T ID CG+ + + D+ ++NV N+ +++L++ + K+ L++Y
Sbjct: 338 DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLY 397
Query: 313 KNMQKLGVMADMASYNILLKACCLAGN----TVLAQEI------------------YGEV 350
+ M+ LG+ D YN +L AG ++ E+ YG+
Sbjct: 398 EKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQ 457
Query: 351 KHLEAKGVLKLD---------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L+ L D V TYST++ +++ A A V D +G+ P+ + +
Sbjct: 458 GRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SS I+ A GLVE A+ L +M + G +PN N ++ A +S L
Sbjct: 518 SSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDA------------FGKSKVL 565
Query: 462 SKTQVALGE-----DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S+ GE Y+G R +N + + +I
Sbjct: 566 SEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSAI-------------------------- 599
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ M+ + Y + L +M G+ PN ++++ +++AC N E A +L+ +R
Sbjct: 600 --DVRMRR-SQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRL 656
Query: 577 DGMSPDVVAYTTAIKVCVRSKRL-KQAFSLFEEM 609
D Y A + + + + QA SLF ++
Sbjct: 657 F----DNFVYGVAYGLLMGYQEIWSQAQSLFNQL 686
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 217 VPRADILFCNFVREFGK--KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ + + + + + +GK + D+VS L D ++ ++ P++ T+ID+ G +
Sbjct: 440 IEKDTVTYNSLINGYGKQGRLDIVSFL-VQDMRRRGVA-PSVLTYSTLIDIYSKAGMHGD 497
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +Y D + + ++ +F+S ++ A + +++ L + +M ++G+ ++ +YN ++
Sbjct: 498 AFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIID 557
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM--------ALK 384
A + VL++E E + GV + + V A +M L+
Sbjct: 558 A--FGKSKVLSEED-PEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILE 614
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ + M+ GV PN +T+S+++NAC+ E A L E++
Sbjct: 615 LFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 654
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 189/426 (44%), Gaps = 36/426 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C T++++ GI + ++ + ++ L +F L +A L+ ++E
Sbjct: 17 PSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEA 76
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+ ++YN L+ A AG T A +Y + + L+ D +T++ ++
Sbjct: 77 LKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY----RVMGQSGLRPDTYTFNVLMN 132
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F AK K+ E+M + +PN IT+S LI+A G VE+A+ +F +M GC P
Sbjct: 133 AFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP 192
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL-----GEDYDGNTDR----- 478
N ++ ++ D+AF LF T L T+V G G D
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252
Query: 479 ---ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT--------TTTYNILMKACCT 527
+S D + T+ + + +S +R F+ YN+L+ C
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI-FQEARDVGCALDVNLYNVLIDTLCK 311
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A + E+ GL P+ ++ L+D SG + A +L M+ G +PDV
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T I +S R+++A L EM+ +P++VTY TL+ + G ++ L +++
Sbjct: 372 YNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGG---RIEDALRLFE 428
Query: 646 DMWKAG 651
++ G
Sbjct: 429 EISAKG 434
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 177/423 (41%), Gaps = 24/423 (5%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
PR +F R + L ++ A + H + ++ID G K+ A
Sbjct: 54 PR---IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALA 110
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y + + + Y FN LMN A + ++++ MQ ++ +Y+IL+ A C
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +++ ++K ++G + ++FTY++++ + A + E+M S G+
Sbjct: 171 KCGGVEKALKVFLDMK---SRGC-RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++SLI+ +G + A LF EML G +P+ L+ A + A R+
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ E D N+ + ++ + + P
Sbjct: 287 FQ------------EARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N LM C + L+ +M+ G +P+ + LID SG VE A Q+L
Sbjct: 335 YTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE 394
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+ G PDVV Y T I + R++ A LFEE+ N VTY T+L G
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGR 453
Query: 634 LHE 636
+ E
Sbjct: 454 VDE 456
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P++Y ++D G+C G + + D++ T ++ V+N+L++ + ++
Sbjct: 332 PDVYTFNALMD--GLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ MQ LG D+ +YN L+ C G A ++ E+ AKG + TY+TI
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI---SAKGFA--NTVTYNTI 444
Query: 370 VKVFADAKWWQMALKV----KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ A A K+ K++ + + P+ +T+++L+N AGL E A L
Sbjct: 445 LNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 135/326 (41%), Gaps = 43/326 (13%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSI-REGRIDCV 132
Y M L K G +++ + E + SEG +++ +V + ++ + R GR D
Sbjct: 197 YTSMIDGLGKSGHVDKAFFLFEEMT-SEG-------LVATRVVYNSLIHGLGRSGRADAA 248
Query: 133 VGVLKKLNELGVAP-----LELFDGSGFKLLKNECQRLLDSGE---VEMFVGLMEVLEEF 184
+ +++ G+ P L G G +E +R+ + V L VL +
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
K LDE + I + +VP D+ N + + L + R +
Sbjct: 309 LCKSKRLDEAWEIFG----------ELEEDGLVP--DVYTFNALMD-----GLCKSGRIH 351
Query: 245 DA------SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA K+ +P++ + T+ID G ++ + +++S ++ +N+L+
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ ++ L +++ + G A+ +YN +L C+AG A +++ +K
Sbjct: 412 DESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVD 470
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMA 382
GV+ D TY+T++ A ++A
Sbjct: 471 GVIDPDFVTYTTLLNGARQAGLSELA 496
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 168/397 (42%), Gaps = 33/397 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G + + ++L V LN +NSL++ + + K M+ GV
Sbjct: 155 VDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGV 214
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ AG+ + +Y E+K G DV+ YS ++ + +
Sbjct: 215 EPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAG----DVYFYSAVINAYCRGGNVR 270
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + GV PN T+ +LIN G +E A L +M G N N ++
Sbjct: 271 RASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMI 330
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISNMEHKDKQ-SITNTP 494
++A + + K + L + Y NT R++ ME K I
Sbjct: 331 DGYCRHGMVEKALEI--KAVMEKMGIEL-DIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
PN Y S+ TT +I K D + L +M G P+ +++ ++
Sbjct: 388 GVAPN--YVSY---------TTLISIHAKE--GDMVEARRLFRDMEGKGSRPSVVTYNVM 434
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G++ A + K M + G+ PD+ Y + + ++ A LFEEMKH
Sbjct: 435 IDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGT 494
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN+V Y L+ ++ G E Q +Y DM AG
Sbjct: 495 KPNVVAYTALVSGLAKEGRSEEAFQ---LYDDMLAAG 528
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 142/372 (38%), Gaps = 82/372 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D GD K A+Y++++ +NV ++Y +++++N +++ EV
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
+ GV + +Y L+ C G A+ + ++
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335
Query: 351 -----KHLEAKGVL-----KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K LE K V+ +LD++TY+T+ + A K+ M GV PN ++
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LI+ A G + +A LF +M G P+ N+++ ++ A R +
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK--- 452
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
ME K VP+ + TY
Sbjct: 453 --------------------EMEKK---------GLVPDIY---------------TYAG 468
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C + A L EM+ G PN +++T L+ G E A Q+ M G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 579 MSPDVVAYTTAI 590
++PD Y+ +
Sbjct: 529 LTPDDTLYSVLV 540
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN T+I + GD +++R ++ D+ + ++ +N +++ + ++
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K M+K G++ D+ +Y L+ C+ G +A ++ E+KH +G K +V Y+ +V
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKH---RGT-KPNVVAYTALV 505
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
A + A ++ +DML+AG+TP+ +S L+ +
Sbjct: 506 SGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S ++++D SG+V+ A +L + G+ + Y + + R + L +E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
M++ ++P + TY L+ SR G + +V+ AVY +M +
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVE---AVYDEMKR 246
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 184/458 (40%), Gaps = 88/458 (19%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QPN+VTY ++ +G + +++ CL + + M G
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKG 809
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 58/421 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQEV 696
Query: 489 SITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC- 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 527 ---TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 757 VGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQ 638
V Y I C ++ L A +L EEMK + Y ++ ++ G L E+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 639 Q 639
Q
Sbjct: 875 Q 875
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 61/353 (17%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + +++ AF LFEEMK + ++ TY ++ + + G + + ++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 139/369 (37%), Gaps = 100/369 (27%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 633 SLHEVQQCL 641
+ E ++ L
Sbjct: 654 RVEEARKLL 662
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 184/458 (40%), Gaps = 88/458 (19%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 469 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 524
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 577
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 578 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 613
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 614 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 673
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 674 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 733
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QPN+VTY ++ +G + +++ CL + + M G
Sbjct: 734 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKG 768
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 58/421 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 536
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQEV 655
Query: 489 SITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC- 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715
Query: 527 ---TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 716 VGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 773
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQ 638
V Y I C ++ L A +L EEMK + Y ++ ++ G L E+
Sbjct: 774 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 833
Query: 639 Q 639
Q
Sbjct: 834 Q 834
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 61/353 (17%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 179 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 234
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 235 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 291
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 292 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 325
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRV-- 532
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385
Query: 533 ------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + +++ AF LFEEMK + ++ TY ++ + + G + + ++
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 139/369 (37%), Gaps = 100/369 (27%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 333 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 379
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 380 -----KDSLNFDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 419
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 420 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 468
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 469 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 492
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 552
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612
Query: 633 SLHEVQQCL 641
+ E ++ L
Sbjct: 613 RVEEARKLL 621
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 572 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 631
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 632 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 687
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 743
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 744 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 682 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 737
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 797
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 798 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 857
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 858 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 914
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 53/417 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + G + LR D + N Y + + G + ++ A+ + +
Sbjct: 26 FISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRML 85
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S+ V L+ Y F++L+ ++ +E+ + M GV D SYN L G++
Sbjct: 86 SEGVRLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSK 145
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + A GV + D TY T++ ++ W++ + + + M S G+TPN ++
Sbjct: 146 NALLM---LEDMVADGV-RPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSF 201
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S LI AC G A+ E+M +G PN + + AC A Q++ A RL +
Sbjct: 202 SPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRL-----I 256
Query: 462 SKTQ-VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
K + +ALG + VP S TT YN
Sbjct: 257 DKLEALALGGE------------------------GVPMS--------------TTMYNF 278
Query: 521 LMKAC--CTDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ AC + + AL+ M++ P+ +++ LIDAC N+E AL L MR
Sbjct: 279 GIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLEDALAYLTEMRAV 338
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G++P AY +A+ + + K+A SL +EM ++ ++ ++ ++ A + G L
Sbjct: 339 GLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQL 395
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 185/411 (45%), Gaps = 35/411 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV-- 311
P+ T++ CG G++ ++ + +RS+ +T N Y F+ L+ + ++ L V
Sbjct: 161 PDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFSPLIKACGKEGRWALAVKT 220
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG-VLKLDVFTYSTIV 370
++M+ G + ++ + + AC AG A + +++ L G + + Y+ +
Sbjct: 221 LEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGVPMSTTMYNFGI 280
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTP-NTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
A A W + + E M S TP + T+S LI+ACA +E A+ EM G
Sbjct: 281 DACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLEDALAYLTEMRAVGL 340
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------------ALGED------ 471
P + A A Q+ A L ++K ++ A G+D
Sbjct: 341 APTFFAYISAMSAIKVAGQWKEALSLLDE--MAKGRLISDVFSFYNVVDAYGKDGQLART 398
Query: 472 ---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKAC 525
N I+ + +S + N KR + ++NIL+ AC
Sbjct: 399 LVQTSANPTEIAADSENEMRSDADL-NAWRAEDPDELVKRMENNGVELDVMSFNILIDAC 457
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG--ALQILKIMREDGMSP 581
++ L+ +M+++GL PN +S+ +I +C G + E AL +L MR+ G++P
Sbjct: 458 ARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLLDEMRKSGLTP 517
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
DV+++ TAI C ++ +++ +LF MK + P++++Y ++ A ++ G
Sbjct: 518 DVISFNTAITSCAKAGDWRRSLNLFAGMKVEGVTPDILSYNAVISACAKGG 568
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 59/356 (16%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y +I+ C G+ K + ++ V + + +N+ ++ V D K L + ++
Sbjct: 94 YTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLMLED 153
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M GV D +Y LL ACC GN+ + + + ++G+ + +++S ++K
Sbjct: 154 MVADGVRPDAITYGTLL-ACC--GNSGEWKLCMSLMDRMRSEGITP-NAYSFSPLIKACG 209
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE--EMLQAGCE-- 430
W +A+K EDM ++G TPN W I AC NAG E+A+ L + E L G E
Sbjct: 210 KEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGV 269
Query: 431 PNSQCC-NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P S N + AC A ++D+ L +
Sbjct: 270 PMSTTMYNFGIDACARAGRWDQGVALL-------------------------------ER 298
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ + P P++ TY+ L+ AC D AL + EMR VGL+P
Sbjct: 299 MKSNPATPPDAQ---------------TYSYLIDACAKDANLEDALAYLTEMRAVGLAPT 343
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++ + A +G + AL +L M + + DV ++ + + +L +
Sbjct: 344 FFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTL 399
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 177/411 (43%), Gaps = 46/411 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFT 308
+PN Y +I CG G + + ED+ + T N + N LM + NA +
Sbjct: 195 TPNAYSFSPLIKACGKEGRWALAVKTLEDMEASGPTPNEH--NWLMAIGACGNAGQWEEA 252
Query: 309 LEVYKNMQKL-----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L + ++ L GV YN + AC AG + ++ +++ D
Sbjct: 253 LRLIDKLEALALGGEGVPMSTTMYNFGIDACARAGRWDQGVAL---LERMKSNPATPPDA 309
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A + AL +M + G+ P + S ++A AG ++A+ L +E
Sbjct: 310 QTYSYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDE 369
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA------LGEDYDGNTD 477
M + + ++ A + Q R L ++ + + T++A + D D N
Sbjct: 370 MAKGRLISDVFSFYNVVDAYGKDGQLART--LVQT-SANPTEIAADSENEMRSDADLNAW 426
Query: 478 R-------ISNMEHKDKQSITNTPNFV------PNSHYSSFD-----KRFSFKPTTTTYN 519
R + ME+ + + N + SH+++ K +P + +YN
Sbjct: 427 RAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYN 486
Query: 520 ILMKAC---CTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
++ +C + +R+ L++EMR GL+P+ IS+ I +C +G+ +L + M+
Sbjct: 487 PIIHSCRGGTDEEWRLALDLLDEMRKSGLTPDVISFNTAITSCAKAGDWRRSLNLFAGMK 546
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLL 625
+G++PD+++Y I C + + + L +++ ++ N TY + +
Sbjct: 547 VEGVTPDILSYNAVISACAKGGQWRIGLELLAKVRADPTLEANQRTYTSAI 597
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 128/345 (37%), Gaps = 85/345 (24%)
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A+ + L+ + Y++ + A + W+ AL +++ MLS GV + T+S+LI AC+ G V
Sbjct: 50 AEDGIPLNSYAYNSALSSIAKSGRWREALALRDRMLSEGVRLDGYTFSALIEACSKGGNV 109
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD- 473
+ + L EM+ AG + N L V A + + VA G D
Sbjct: 110 AKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLML------EDMVADGVRPDA 163
Query: 474 ----------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
GN+ +S M+ + IT PN+ +SF P
Sbjct: 164 ITYGTLLACCGNSGEWKLCMSLMDRMRSEGIT------PNA--------YSFSP------ 203
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------ 571
L+KAC + A+ + +M G +PN +W + I ACG +G E AL+++
Sbjct: 204 -LIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEAL 262
Query: 572 -----------------------------------KIMREDGMSPDVVAYTTAIKVCVRS 596
++ PD Y+ I C +
Sbjct: 263 ALGGEGVPMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKD 322
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L+ A + EM+ + P YI+ + A G E L
Sbjct: 323 ANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLL 367
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 45/273 (16%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ + KV W+ L++ + M G+ N+ ++S +++ A +G +A+ L + M
Sbjct: 25 SFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRM 84
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G + + L++AC + + L R E D R
Sbjct: 85 LSEGVRLDGYTFSALIEACSKGGNVAKGVELLR------------EMVDAGVARDC---- 128
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
F N+ F + K N L+ ++ +M G+
Sbjct: 129 -----------FSYNAALHGFVRNGDSK------NALL------------MLEDMVADGV 159
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I++ L+ CG SG + + ++ MR +G++P+ +++ IK C + R A
Sbjct: 160 RPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFSPLIKACGKEGRWALAVK 219
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
E+M+ PN ++ + A G E
Sbjct: 220 TLEDMEASGPTPNEHNWLMAIGACGNAGQWEEA 252
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL + M + G+ + +++ LI+AC GNV +++L+ M + G++ D +Y A+
Sbjct: 79 ALRDRMLSEGVRLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGF 138
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VR+ K A + E+M ++P+ +TY TLL G+ E + C+++ M G
Sbjct: 139 VRNGDSKNALLMLEDMVADGVRPDAITYGTLLAC---CGNSGEWKLCMSLMDRMRSEG 193
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 254 PNMYICRTIIDVC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN II C G ++ + + +++R +T ++ FN+ + A D + +L
Sbjct: 480 PNSLSYNPIIHSCRGGTDEEWRLALDLLDEMRKSGLTPDVISFNTAITSCAKAGDWRRSL 539
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV D+ SYN ++ AC G + E+ +V+ A L+ + TY++
Sbjct: 540 NLFAGMKVEGVTPDILSYNAVISACAKGGQWRIGLELLAKVR---ADPTLEANQRTYTSA 596
Query: 370 VKVF 373
+ F
Sbjct: 597 INCF 600
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 176/404 (43%), Gaps = 52/404 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ C ++I G C G K+ I E L + ++ +N L+ + ++ L
Sbjct: 140 PDVIACTSLIR--GFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL 197
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V ++++ V D+ +YN +L++ C +G A E+ E DV TY+ +
Sbjct: 198 QV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP----DVITYTIL 250
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+K+ ++M G P+ +T++ LIN G +++A+ M GC
Sbjct: 251 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGC 310
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA----------------LGEDYD 473
+PN NI+L++ ++ A RL + LG D
Sbjct: 311 QPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID 370
Query: 474 GNTDRISNMEHKDKQS-ITNTPNFVPNSHYSSFDKRFSFK-------------PTTTTYN 519
+E K + N+ ++ P H +K+ P TYN
Sbjct: 371 -------VLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A C D A ++N++ + G SP I++ +ID G E A ++L+ MR
Sbjct: 424 TLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ PD++ Y+T ++ ++ +A +F +M+ I+P+ VTY
Sbjct: 484 GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+L+ C +G EI ++ LE V DV TY+TI++
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSG------EIDKALQVLERMSVAP-DVVTYNTILRSLC 220
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + + P+ IT++ LI A N V QAM L +EM + GC+P+
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------VALGEDYDGNTDRISN 481
N+L+ + + D A + + L Q + G D +++
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER-LLAD 339
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K + P + +YN L+ C +
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ + M + G P+ +++ L+ A G + A++IL + G SP ++ Y T
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + A L EEM+ ++P+++TY TLLR G +V + + ++ DM
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG---LGCEGKVDEAIKIFHDM 515
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 46/335 (13%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+K G D+ +YN+L+ C G E + ++ G + +V T++
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPLYGC-QPNVITHNI 319
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A ++ DML G +P+ +T++ LIN L+ +A+ + E+M + G
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGED--YDGNT 476
C PNS N LL + + DRA T + AL +D D
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAV 439
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI----LMKACCTDYYRV 532
+ ++ + K P TYN L K T+Y
Sbjct: 440 EILNQLSSK------------------------GCSPVLITYNTVIDGLTKVGKTEY--A 473
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ EMR GL P+ I+++ L+ G G V+ A++I M + P V Y +
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++ +A M +P TY L+
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 57/273 (20%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK E M+ G P+ I +SLI +G +A + E + +G P+ N+L+
Sbjct: 126 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIG 185
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
++ + D+A ++
Sbjct: 186 GYCKSGEIDKALQVL--------------------------------------------- 200
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTILIDAC 558
+R S P TYN ++++ C D ++K M + P+ I++TILI+A
Sbjct: 201 -----ERMSVAPDVVTYNTILRSLC-DSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 254
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G PDVV Y I + RL +A M Y QPN+
Sbjct: 255 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNV 314
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+T+ +LR+ G + ++ LA DM + G
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLA---DMLRKG 344
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 120/308 (38%), Gaps = 55/308 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ I+ G +M + + D+ + + ++ FN L+N L ++V
Sbjct: 312 PNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDV 371
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G M + SYN LL C A E Y E+ + ++G D+ TY+T++
Sbjct: 372 LEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE-YLEI--MVSRGCYP-DIVTYNTLLT 427
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A+++ + S G +P IT++++I+ G E A L EEM + G +P
Sbjct: 428 ALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKP 487
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + LL+ + D A ++F D +G
Sbjct: 488 DIITYSTLLRGLGCEGKVDEAIKIF-------------HDMEG----------------- 517
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
S KP+ TYN +M C +A+ + M G P
Sbjct: 518 -----------------LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560
Query: 550 SWTILIDA 557
++TILI+
Sbjct: 561 TYTILIEG 568
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G + R + S R DA +
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + N +N L++
Sbjct: 336 LLADMLRKGCSPSVVTFNILINF--LCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHG 393
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K +E + M G D+ +YN LL A C G A EI + L +KG
Sbjct: 394 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI---LNQLSSKGC 450
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A ++ E+M G+ P+ IT+S+L+ G V++A+
Sbjct: 451 SPV-LITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+F +M +P++ N ++ +A Q RA
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 544
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+KR L A+ + KH PN ++ G C + RAI E + S+ +
Sbjct: 361 RKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH--GFCQEKKMDRAIEYLEIMVSRGCYPD 418
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I +N+L+ D K +E+ + G + +YN ++ G T A E+
Sbjct: 419 IVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E++ KG LK D+ TYST+++ A+K+ DM + P+ +T+++++
Sbjct: 479 EMRR---KG-LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
A +A+ M++ GC+P IL++
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E L+ L+ M G PDV+A T+ I+ RS + ++A + E +++ P+++T
Sbjct: 120 NGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVIT 179
Query: 621 YITLLRARSRYGSLHEVQQCL 641
Y L+ + G + + Q L
Sbjct: 180 YNVLIGGYCKSGEIDKALQVL 200
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 40/350 (11%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M LG+ + SY+I L AC G QE ++ +E +KLDV YS + A
Sbjct: 1 MPGLGIRPSVESYSIGLTACAKGGRW---QEALVLLREMEEDDEIKLDVVAYSAAITACA 57
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ WQ A+ + DM + GV PN I+ ++ I A AG + A+ + M +AG P++
Sbjct: 58 NGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAI 117
Query: 435 CCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDR-ISNME 483
N + A A Q ++A L T + A+ G + ++ ++
Sbjct: 118 SYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVK 177
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
H +T P + TYN L+ AC +AL + M+
Sbjct: 178 HMSLAGVT---------------------PDSITYNSLIVACGKGGQWKQALSVLKGMKK 216
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GLS + I ++ I ACG +G E ++ +L + G++PD+VAYT A+ C + + +
Sbjct: 217 QGLSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPDLVAYTAAVTACADANQRDK 276
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L +EM I+P+ + +L+ A G + Q + + + M K G
Sbjct: 277 ATFLLKEMLSAGIRPDAAAFTSLIAALGHDG---QWTQAVEILESMPKMG 323
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 124/286 (43%), Gaps = 21/286 (7%)
Query: 190 ELDEEFRI--------VQLCVNKPDVNLAIRYACIVP----RADILFCNF-VREFGKKRD 236
E D+E ++ + C N A+ +P R +++ CN ++ +G+
Sbjct: 37 EEDDEIKLDVVAYSAAITACANGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQ 96
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
AL K SP+ T I G+ G +++ + ++ + + +NS
Sbjct: 97 WQHALSILRGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNS 156
Query: 297 LMNV----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ + + + K+M GV D +YN L+ AC G A + +K
Sbjct: 157 AIAAIARGGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSV---LKG 213
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ +G L D+ YS + +A W+ ++ + + S G+TP+ + +++ + ACA+A
Sbjct: 214 MKKQG-LSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPDLVAYTAAVTACADAN 272
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++A L +EML AG P++ L+ A Q+ +A + S
Sbjct: 273 QRDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILES 318
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADM 324
G G + ++ A+ + + VT + +NSL+ K L V K M+K G+ D+
Sbjct: 164 GGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDI 223
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
Y+ + AC AG + + E K L + D+ Y+ V ADA A
Sbjct: 224 IGYSAAISACGEAGQWEYSVGLLAEAKSLG----ITPDLVAYTAAVTACADANQRDKATF 279
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ ++MLSAG+ P+ ++SLI A + G QA+ + E M + G N+ N L+ +
Sbjct: 280 LLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNALITSWA 339
Query: 445 EA 446
A
Sbjct: 340 NA 341
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 184/458 (40%), Gaps = 88/458 (19%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QPN+VTY ++ +G + +++ CL + + M G
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKG 809
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 58/421 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQEV 696
Query: 489 SITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC- 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 527 ---TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 757 VGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQ 638
V Y I C ++ L A +L EEMK + Y ++ ++ G L E+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 639 Q 639
Q
Sbjct: 875 Q 875
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 61/353 (17%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + +++ AF LFEEMK + ++ TY ++ + + G + + ++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 139/369 (37%), Gaps = 100/369 (27%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 633 SLHEVQQCL 641
+ E ++ L
Sbjct: 654 RVEEARKLL 662
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 59/286 (20%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
L++ LFR+ +S+ + L D IS+ME
Sbjct: 959 SLIKG------------LFRNSKISEALLLL--------DFISHME 984
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 201/471 (42%), Gaps = 43/471 (9%)
Query: 210 AIRYACIVPRADILFCNF--VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
A R A VP + F VR + + AL D + +P + I++
Sbjct: 109 ARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAAC 168
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
G + + + EDL ++ L++ N ++N + + L + +++ G D+
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVV 228
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN +LK C+A QE+ E+ + ++ T++T++ ++ +V
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPP----NIVTFNTLISYLCRNGLFERVHEV 284
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M G TP+ ++++I+ G ++ A + M G +PN C N LL+
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 446 ACQFDRAFRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNT-PNF 496
A +++ L + L + D+ +G DR+ +E ++ + P+
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV--IELLEQMLVHGCMPDV 402
Query: 497 VPNSHYSSFDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--L 535
+ Y++ F KP T +Y I++K C+ V A L
Sbjct: 403 I---TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
M++M G N I++ LI+ G VE A+++LK M +G SPD+++Y+T I +
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + +A L M + + PN + Y ++ A SR G +++V Q QD
Sbjct: 520 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQD 570
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 161/393 (40%), Gaps = 55/393 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I G + + + + T +I ++ ++++ LK E+
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ ++ YN LLK C A +E+ E+ + LD T++ +V
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP----LDDVTFNILVD 375
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +++ E ML G P+ IT++++IN GL+++A+ L + M GC+P
Sbjct: 376 FFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ I+L+ C +R W D M +Q
Sbjct: 436 NTISYTIVLKG---LCSAER-------WV----------------DAEDLMSQMIQQGCP 469
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
P T+N L+ C +A L+ +M G SP+ I
Sbjct: 470 LNP---------------------ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S++ +ID G +G + AL++L +M GMSP+ + Y++ R R+ + +F+ +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ I+ + V Y ++ + + G + LA
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +V + A + A ++ + V PN T+ ++ A G + A+ + +EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-GNTDRISNMEH 484
+ GC P +++L+A F A R+ A G D GN + + N
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH------ARGCALDVGNCNLVLN--- 200
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+I + + H F +P +YN ++K C + V+ LM EM +
Sbjct: 201 ----AICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN +++ LI +G E ++L M E G +PD+ Y T I + LK A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ M Y ++PN+V Y TLL+ E ++ LA
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 330 PNVVCYNTLLK--GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + A G K + +Y+ +
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMTACGC-KPNTISYTIV 443
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W A + M+ G N IT+++LIN GLVEQA+ L ++ML GC
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + D A L T+ + +A +G +++
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M + + + + N+ SS KR + R + M +
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKR------------------GETERAIEFLAYMVS 605
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++TILI G V+ A ++L
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEML 635
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 179/436 (41%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++++ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV ++ KA
Sbjct: 849 EQAAIVGAVLRETGKA 864
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 222/527 (42%), Gaps = 56/527 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L+V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E+M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
I+ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
I + RL +A+ LFEE K +I+ N+V Y +L+ + G + E
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 174/401 (43%), Gaps = 35/401 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+++ ++ N+ +N L+++ A L E+ +MQK G+ ++ + NI++ C
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ A ++ E+ + V D T+ +++ A KV E ML +
Sbjct: 424 KSQKLDEACAMFEEMDY----KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N+I ++SLI N G E ++++M+ C P+ Q N + +A + ++ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV------ 497
F RS+++ + + + +M+ + T N V
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 498 ---PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHIS 550
N Y + K F+PT TY ++ +A M E ++ + N +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G G ++ A IL+ + + G++P++ + + + V+++ + +A F+ MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN VTY L+ + + + + +Q+M K G
Sbjct: 720 ELKCTPNQVTYGILINGLCK---VRKFNKAFVFWQEMQKQG 757
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 61/351 (17%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALKVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++L +A ++FEEM + P+ +T+ +L+ + G V VY+ M
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKVYEKM 473
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNLYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ CV+A + + + + K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 369 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 483
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 526
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 137/358 (38%), Gaps = 84/358 (23%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L + + M + G + D Y ++ A C G A + E+ + DV T+
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA----DVNTFD 249
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTP------------------------------- 396
+V+ + A ++ + M++ G P
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + ++++I C G + +A L+E M GC+P++ +IL+ + + A RL
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R ME K F P
Sbjct: 370 RE-----------------------MEKK------------------------GFAPNVV 382
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY I++ + C + + +AL+ EM GL+ N + +I A G ++ A+ +++ M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
R G +PD+ +Y T I ++++++A +FE + + N +TY T++ A R G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 500
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 480
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 481 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 571
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 57/303 (18%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
T + + M G+ + YN ++ A C G E G ++ + ++G D+ +Y+
Sbjct: 400 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYN 455
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ + + + A + E++L GV N IT++++I+A G + A+ L +EM+
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKD 486
GC + N L++A C+ DGN DR + +E
Sbjct: 516 GCSLDVVSYNGLIKA---MCK------------------------DGNVDRSLVLLEEMA 548
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVG 543
++ I KP +YNIL+ C + RV+ L +M G
Sbjct: 549 EKGI---------------------KPNNVSYNILISELCKE-RRVRDALELSKQMLNQG 586
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+P+ +++ LI+ G + AL +L+ + + + PD++ Y I + + L A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 604 SLF 606
L
Sbjct: 647 MLL 649
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
++ ++E+L + V N +N++++ D ++ + + K M G D+ SYN L+
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528
Query: 332 KACCLAGNT----VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
KA C GN VL +E+ A+ +K + +Y+ ++ + + AL++ +
Sbjct: 529 KAMCKDGNVDRSLVLLEEM--------AEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
ML+ G+ P+ +T+++LIN G + A++L E++ P+ NIL+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 128/340 (37%), Gaps = 28/340 (8%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV SYN++L A A +Y + H + + FT+ +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVH---RDRVPPTTFTFGVAARALCR 187
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + M G P+ + + ++I+A + G V +A L EML GC +
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNT 493
+ +++ + A RL ++K + Y + + D + +
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDR-MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
P +N ++ C + +A L M G P+ ++
Sbjct: 307 PEL-----------------NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTY 349
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+IL+ G + A+++L+ M + G +P+VV YT + ++ +L EEM
Sbjct: 350 SILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ N Y ++ A + G + E + + Q+M G
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEA---MGLIQEMRSQG 446
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ + +++RSQ +I +N+++ N ++ +++N+ + GV+A+ +Y
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ A G Q+ K + G LDV +Y+ ++K +L + E
Sbjct: 490 NTIIHALLRDGRW---QDAVRLAKEMILHGC-SLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+M G+ PN ++++ LI+ V A+ L ++ML G P+ N L+
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 202/470 (42%), Gaps = 60/470 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K + +A ++ +K+ L S N I II C IC + ++ A+
Sbjct: 355 VTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQIC-NMDRAEALVR 413
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ Q + I +++++M+ + + L V+ +++ G + SY L+ G
Sbjct: 414 EMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVG 473
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A EI K ++ G+ K ++ TYS ++ F K W A V ED G+ P+
Sbjct: 474 KVSKALEI---SKMMKMSGI-KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDV 529
Query: 399 ITWSSLINA-----------C------------------------ANAGLVEQAMHLFEE 423
+ ++++I A C A AG + +A+ +F+
Sbjct: 530 VLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDM 589
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M ++GC P N L+ VE Q +A + ++ G +
Sbjct: 590 MRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGV---------GPNEHTYTTL 640
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
+ S+ +T Y + + + TY L+K+CC AL EM
Sbjct: 641 MQGYASLGDTEKAF---QYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSA 697
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ N + ILID G+V A +++ MR++G+ PD+ YT+ I C ++ +++
Sbjct: 698 KNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQK 757
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A + +EM+ I+PNL TY TL+ +R S+ E + L+ +++M AG
Sbjct: 758 ATEIIQEMEASGIKPNLKTYTTLINGWAR-ASMPE--KALSCFEEMKLAG 804
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 192/452 (42%), Gaps = 69/452 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
++ G GD +R +E +R++ + + +V++SL++ A D++ L + M++ G
Sbjct: 290 MVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 349
Query: 320 VMADMASYNILLKACCLAGNTVLAQE---------------IYGE--------------- 349
+ + +Y+I++ GN A IYG
Sbjct: 350 IEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAE 409
Query: 350 --VKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V+ +E +G+ +D+ Y T++ + + L V + + G P+ I++ LIN
Sbjct: 410 ALVREMEEQGIDAPIDI--YHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLIN 467
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KT 464
G V +A+ + + M +G + N + ++L+ ++ + AF +F +T K
Sbjct: 468 LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKP 527
Query: 465 QVALGEDYD------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSS---------- 504
V L + GN DR + M+ + + T T F+P H +
Sbjct: 528 DVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRT--FLPIIHGFARAGEMRRALE 585
Query: 505 -FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
FD +R PT TYN L+ KA +++EM G+ PN ++T L+
Sbjct: 586 IFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYA 645
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G+ E A Q ++R +G+ DV Y +K C +S R++ A ++ +EM I N
Sbjct: 646 SLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF 705
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y L+ +R G + E + Q M K G
Sbjct: 706 VYNILIDGWARRGDVWEAADLM---QQMRKEG 734
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D PN + T++ GD K+ + LR++ + +++Y
Sbjct: 611 EKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVY 670
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 671 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADL---M 727
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +G+L D+ TY++ + A Q A ++ ++M ++G+ PN T+++LIN A
Sbjct: 728 QQMRKEGLLP-DIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWAR 786
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A + E+A+ FEEM AG +P+ + L+ + + F +++
Sbjct: 787 ASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSY 829
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 64/387 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + NIY N L+N H L F V + KLG ++A++N
Sbjct: 75 YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 134
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L++ C+ G GEV HL K + + +V TY T++ A+++
Sbjct: 135 LIRGLCVEGKI-------GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + ++S+I++ V QA +LF EM+ G P+ N L+ A
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C++ L SK
Sbjct: 248 CEWKHVTALLNEMVNSKIM----------------------------------------- 266
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P ++ ++ A C + ++A +++ M G+ PN +++ L+D +
Sbjct: 267 ------PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ M G +PDVV+Y+T I + +R+++A LFEEM ++ PN VTY TL
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L Q +A++ +M G
Sbjct: 381 MHGLCHVGRL---QDAIALFHEMVTRG 404
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 179/419 (42%), Gaps = 62/419 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D ++A ++ ++ Q ++ +I+ +NS
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 239
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M ++ ++ ++ A C G + A ++ V +
Sbjct: 240 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV---VDMMI 296
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G P+ +++S+LIN +
Sbjct: 297 KRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+AM+LFEEM + PN+ + L+ + A LF +++ Q+
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM-VTRGQI-------- 406
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P+FV +Y IL+ C +
Sbjct: 407 -------------------PDFV-------------------SYCILLDYLCKNRRLDEA 428
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A + + G+ P+V YT I
Sbjct: 429 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 488
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L +A LF EMK PN TY + R R +E + + + Q+M G
Sbjct: 489 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN---NETLRGIQLLQEMLARG 544
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 180/434 (41%), Gaps = 69/434 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ A+
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC-EWKHVTALLN 258
Query: 281 DLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ + + N+ +F+++++ + AHD V M K GV ++ +YN L+
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD------VVDMMIKRGVEPNVVTYNALMD 312
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL A +++ + KG DV +YST++ + + + A+ + E+M
Sbjct: 313 GHCLRSEMDEAVKVFDT---MVCKGFAP-DVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 368
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ PNT+T+S+L++ + G ++ A+ LF EM+ G P+ ILL + + D A
Sbjct: 369 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 428
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ++ +G SNM+
Sbjct: 429 IALLKA-------------IEG-----SNMD----------------------------- 441
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P Y I++ C + + L + + + GL PN ++TI+I+ G + A ++
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G SP+ Y + +R+ + L +EM ++ T L+ S
Sbjct: 502 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 561
Query: 631 YGSLHEVQQCLAVY 644
G V+Q L+ +
Sbjct: 562 DGLDQSVKQILSEF 575
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + N+ +I ++ +++ A +L+ +++ N+ G+ ++ +Y I++
Sbjct: 430 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A +++GE+K KG + TY+ I + F +++ ++ML+ G
Sbjct: 490 CQQGLLAEASKLFGEMKR---KGY-SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 545
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + T + L+ ++ GL + + E LQ
Sbjct: 546 SADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ +NS++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 174/418 (41%), Gaps = 67/418 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN N ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 18/253 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +P+ T+I + G + +E
Sbjct: 379 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKACC 335
+ + ++ V+NSL+ H L E+ M G+ D +N ++ + C
Sbjct: 435 MIDERLSPGNIVYNSLI----HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +++++ L + +K ++ TYST++ + A A K+ M+S G+
Sbjct: 491 KEGRVIESEKLF----DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+++LIN +E A+ LF EM +G P+ NI+LQ + + A L
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 456 FRSWTLSKTQVAL 468
+ T S TQ+ L
Sbjct: 607 YVGITESGTQLEL 619
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV ++ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + PN+ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 31/351 (8%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M G + + +Y LL++ C A A+ ++ + + A+G +VF+YS ++
Sbjct: 40 YNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF---RGMAAQGC-SPNVFSYSILIA 95
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ +M+ G PN +T+ SL++ G +++A+ LF M+ GC P
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNME 483
+ N+L+ + A+RLF + + G G R+ ++
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSL- 214
Query: 484 HKDKQSITNTPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCT 527
KD PN F N+ F K P +YN LM+ C+
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCS 274
Query: 528 DY--YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + L+ EM G+ P+ +S+ ILID SG ++ A+++ + + G+ PD +
Sbjct: 275 KGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
Y+T I R+ ++ AF +F++M P+ I L+ R L E
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE 385
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 127/313 (40%), Gaps = 28/313 (8%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+Y+ +++V A + DML AG PNT T+ L+ + A E+A +F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG------ 474
M GC PN +IL+ + D A L Q V G G
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 475 ---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNI 520
D S M ++ N + + D +++ PT TYN
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ ++ RV++L +M G PN ++ L+D G++ A ++ MR G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDVV+Y T ++ + +A L EM + P++V+Y L+ S+ G+L
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL---D 314
Query: 639 QCLAVYQDMWKAG 651
+ ++ ++ K+G
Sbjct: 315 HAIKLFYEIPKSG 327
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 117/236 (49%), Gaps = 9/236 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +++ + F KK D+ A R ++ + P ++ +++ G++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ Q NI+ FN+L++ D+ ++ M+ LG D+ SYN L++ C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G AQ + E+ + + D+ +Y+ ++ ++ + A+K+ ++ +G+
Sbjct: 274 SKGKPHEAQRLLREM----IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P+ ++S++I+ AG V A +F++M+ G P++ +++ + C+ +R
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA---VVIPLVIGLCRGER 382
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 52/257 (20%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++++ L+ A +G + + +ML AGC PN+ LL++ +A +F+ A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R P
Sbjct: 76 RGMAAQGCS-----------------------------------------------PNVF 88
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+Y+IL+ C +A L+NEM G PN +++ L+ G ++ A+ + M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G PD V Y I + + +A+ LFEEM P + TY +LL SR G
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 635 HEVQQCLAVYQDMWKAG 651
VQ ++++DM + G
Sbjct: 209 GRVQ---SLFKDMLRQG 222
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 185/427 (43%), Gaps = 56/427 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + G D S + ++A K + N+ ++D G ++ +++
Sbjct: 322 VTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQ 381
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + + Y +NSL++ + A L LE++ +M G + +Y + + +G
Sbjct: 382 MKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGE 441
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ A + Y + +++KG++ DV + ++ A + MA +V ++ S GV P+ I
Sbjct: 442 SLKAIKRY---ELMKSKGIVP-DVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI 497
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +I C+ A ++AM +F EM++ C P+ N L+ +A + + A+++F
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
K + PT TYN
Sbjct: 558 -----------------------------------------------KEMNLDPTDCTYN 570
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V L+ EM + PN I++ ++D +G V AL +L M
Sbjct: 571 TLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMK 630
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G PD+ +Y TA+ V+ RL +AF +F +MK + P+ T T+L + + G ++E
Sbjct: 631 GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEA 689
Query: 638 QQCLAVY 644
L Y
Sbjct: 690 LHTLKEY 696
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 165/389 (42%), Gaps = 70/389 (17%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+++ + + S V+L +N+L+ V+ + + ++ M++LG D +YN++
Sbjct: 758 LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L A G ++ +++ K + KG V TY+TI+ +K A+ + ++
Sbjct: 818 LDA---MGKSMRIEDMLKVQKEMHCKGYESTYV-TYNTIISGLVKSKMLYEAMDLYYKLM 873
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +P T+ L++ G +E A LF+EML GC+PN NILL
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG-------- 925
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+RL GNT+++ + N V
Sbjct: 926 --YRL-----------------AGNTEKVCELFQ----------NMVDQG---------- 946
Query: 511 FKPTTTTYNILMKACCT--------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y +L+ A CT Y+R ++ +GL P+ I++ +LI G SG
Sbjct: 947 INPDIKSYTVLIGALCTAGRLNDSLSYFR------QLTELGLEPDLITYNLLIHGLGRSG 1000
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A+ + M + G++P++ Y + I + + +A ++EE+ +PN+ TY
Sbjct: 1001 RLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYN 1060
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ S GS A Y M G
Sbjct: 1061 ALIGGYSVSGS---TDNAFASYGQMIVGG 1086
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 171/415 (41%), Gaps = 62/415 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKAC 334
+ ++ V N+Y + + V +F E YK +QK+ G D+ + +L++
Sbjct: 238 LLREMEDHGVKPNVYSYTICIRVLGQAGRFE-EAYKILQKMEDEGCKPDVVTNTVLIQIL 296
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG A++++ ++K + K D TY T++ D + +++ M + G
Sbjct: 297 CDAGRVSDAKDVFWKMKASDQKP----DRVTYITLLDKCGDNGDSRSVIEIWNAMKADGY 352
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
N + ++++++A G V++A +F++M Q G EP N L+ ++A + + A
Sbjct: 353 NDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALE 412
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
LF + G +G T + N K +S+ + K P
Sbjct: 413 LFNHMNIH------GPTPNGYTYVLFINYYGKSGESLKAIKRY-------ELMKSKGIVP 459
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
N ++ + K + +E++++G+ P++I++T++I C + N + A+++
Sbjct: 460 DVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVF 519
Query: 572 KIMREDGMSPDVVA-----------------------------------YTTAIKVCVRS 596
M E PDV+A Y T + R
Sbjct: 520 SEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGRE 579
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++K+ L EEM PNL+TY T+L + G EV L + +M G
Sbjct: 580 GKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG---EVNYALGMLYNMTMKG 631
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 190/454 (41%), Gaps = 39/454 (8%)
Query: 225 CNFV----REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
CN++ R G+ RD+ + +D ++ + N+ TI G+ G +
Sbjct: 115 CNYMLELMRAHGRVRDMA---QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALP 171
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + LN Y +N L+ V + + +EVYK M G++ + +Y++L+ LA
Sbjct: 172 MMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLM----LAF 227
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ + ++ +E GV K +V++Y+ ++V A ++ A K+ + M G P+
Sbjct: 228 GKRDVETVVWLLREMEDHGV-KPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDV 286
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T + LI +AG V A +F +M + +P+ LL C + ++ +
Sbjct: 287 VTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNA 346
Query: 459 W--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
++ T V G D S++ + KQ + NS S F K
Sbjct: 347 MKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADR 406
Query: 511 FK---------------PTTTTYNILMKACCTDYYRVKALMNE--MRTVGLSPNHISWTI 553
P TY + + +KA+ M++ G+ P+ ++
Sbjct: 407 LNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNA 466
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++ + SG + A ++ ++ G+ PD + YT IK C ++ +A +F EM +
Sbjct: 467 VLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETR 526
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
P+++ +L+ + G +E + ++M
Sbjct: 527 CVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEM 560
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 137/339 (40%), Gaps = 57/339 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ G++ + +YN L+ +G A E+Y K + G++ V TYS ++ F
Sbjct: 173 MKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVY---KVMATDGIVP-SVRTYSVLMLAFG 228
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ ++E M GV PN +++ I AG E+A + ++M GC+P+
Sbjct: 229 KRDVETVVWLLRE-MEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVV 287
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+L+Q +A + A +F W M+ D+
Sbjct: 288 TNTVLIQILCDAGRVSDAKDVF--W---------------------KMKASDQ------- 317
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
KP TY L+ C D V + N M+ G + N +++T
Sbjct: 318 -----------------KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYT 360
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++DA G V+ A + M++ G+ P +Y + I +++ RL A LF M +
Sbjct: 361 AVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIH 420
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN TY+ + + YG E + + Y+ M G
Sbjct: 421 GPTPNGYTYVLFI---NYYGKSGESLKAIKRYELMKSKG 456
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 170/396 (42%), Gaps = 34/396 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ ++ID G ++ I+ +L+ N+ +N+L+ + +K + +
Sbjct: 529 PDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++ +YN +L C G A G + ++ KG + D+ +Y+T +
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYA---LGMLYNMTMKGCMP-DLSSYNTALH 644
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE-MLQAGCE 430
A ++ M + P+ T +++ + GL+ +A+H +E +LQ G +
Sbjct: 645 GLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSK 703
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EH--KDK 487
+ + L++ ++ +++ + LS+ L +D+ +S + H K K
Sbjct: 704 ADRSSFHSLMEGILKRAGMEKSIEFAENIALSRI---LLDDF-----FLSPLIRHLCKSK 755
Query: 488 QSITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTV 542
+++ +H K+F T +YN L+ + + L +EM+ +
Sbjct: 756 KAL--------EAH--ELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++ +++DA G S +E L++ K M G V Y T I V+SK L +A
Sbjct: 806 GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
L+ ++ P TY LL + G + + +
Sbjct: 866 MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN I +++ + G+ K +++++ Q + +I + L+ A L +L
Sbjct: 914 PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY 973
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ + +LG+ D+ +YN+L+ +G A ++ + +E G+ +++TY++++
Sbjct: 974 FRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFND---MEKSGIAP-NLYTYNSLIL 1029
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A K+ E++L G PN T+++LI + +G + A + +M+ GC P
Sbjct: 1030 YLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPP 1089
Query: 432 NS 433
NS
Sbjct: 1090 NS 1091
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 64/387 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + NIY N L+N H L F V + KLG ++A++N
Sbjct: 84 YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNT 143
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L++ C+ G GEV HL K + + +V TY T++ A+++
Sbjct: 144 LIRGLCVEGKI-------GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + ++S+I++ V QA +LF EM+ G P+ N L+ A
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C++ L SK
Sbjct: 257 CEWKHVTALLNEMVNSKIM----------------------------------------- 275
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P ++ ++ A C + ++A +++ M G+ PN +++ L+D +
Sbjct: 276 ------PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ M G +PDVV+Y+T I + +R+++A LFEEM ++ PN VTY TL
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L Q +A++ +M G
Sbjct: 390 MHGLCHVGRL---QDAIALFHEMVTRG 413
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 179/419 (42%), Gaps = 62/419 (14%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D ++A ++ ++ Q ++ +I+ +NS
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 248
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M ++ ++ ++ A C G + A ++ V +
Sbjct: 249 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV---VDMMI 305
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G P+ +++S+LIN +
Sbjct: 306 KRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+AM+LFEEM + PN+ + L+ + A LF +++ Q+
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM-VTRGQI-------- 415
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P+FV +Y IL+ C +
Sbjct: 416 -------------------PDFV-------------------SYCILLDYLCKNRRLDEA 437
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A + + G+ P+V YT I
Sbjct: 438 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 497
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L +A LF EMK PN TY + R R +E + + + Q+M G
Sbjct: 498 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN---NETLRGIQLLQEMLARG 553
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 180/434 (41%), Gaps = 69/434 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ A+
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC-EWKHVTALLN 267
Query: 281 DLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ + + N+ +F+++++ + AHD V M K GV ++ +YN L+
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD------VVDMMIKRGVEPNVVTYNALMD 321
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL A +++ + KG DV +YST++ + + + A+ + E+M
Sbjct: 322 GHCLRSEMDEAVKVFDT---MVCKGFAP-DVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 377
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ PNT+T+S+L++ + G ++ A+ LF EM+ G P+ ILL + + D A
Sbjct: 378 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 437
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L ++ +G SNM+
Sbjct: 438 IALLKA-------------IEG-----SNMD----------------------------- 450
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P Y I++ C + + L + + + GL PN ++TI+I+ G + A ++
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M+ G SP+ Y + +R+ + L +EM ++ T L+ S
Sbjct: 511 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 570
Query: 631 YGSLHEVQQCLAVY 644
G V+Q L+ +
Sbjct: 571 DGLDQSVKQILSEF 584
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + N+ +I ++ +++ A +L+ +++ N+ G+ ++ +Y I++
Sbjct: 439 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A +++GE+K KG + TY+ I + F +++ ++ML+ G
Sbjct: 499 CQQGLLAEASKLFGEMKR---KGY-SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 554
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + T + L+ ++ GL + + E LQ
Sbjct: 555 SADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 56/349 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA----QEIYGEVKHLEAKGVLKLDVF 364
L++ ++ G D +YNIL+ +G T A +E+ G+ H DV
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP--------DVV 743
Query: 365 TYSTIVKVFADAKWWQMALKVKEDM---LSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
TY+T++ A + A ++ DM +S PN +T+S LIN G +++A L
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 422 EEMLQAGCE--PNSQCCNILLQAC------VEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+EM++ C+ PN N L EAC+ R+ R S +S V D
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR-DGSLRVSPDTVTFSTLID 862
Query: 474 G-----NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC 526
G TD N+ FD + + P TYN+LM C
Sbjct: 863 GLCKCGQTDEACNV----------------------FDDMIAGGYVPNVVTYNVLMNGLC 900
Query: 527 -TDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
TD R A++ M G++P+ I++++L+DA + +V+ AL++L M G +P+VV
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYG 632
+ + I +S + +AF +F++M + + P+ +TY TL+ R G
Sbjct: 961 TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNELGAG 235
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L +M C PN ++L+
Sbjct: 236 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295
Query: 443 CVEACQFDRAFRLFRSWTLSKTQV-----ALGEDYDG------NTDRISNMEHKDKQSIT 491
+ + D A L + T V DG + M S+
Sbjct: 296 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355
Query: 492 NTPNFVPNSHY--------------SSFDKRFS--FKPTTTTYNILMKACC--TDYYRVK 533
+P+ V S S FD + + P TYN L+ C R
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A++ M G++P+ I++++L+DA + V+ AL++L M G +P+VV + + I
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Query: 594 VRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+S R +AF +F++M + + P+ +TY TL+ R G + + L D
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD 529
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 40/421 (9%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
D + KH P+ T+ID G ++ A+ + + + Y FN +N
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDT----YAFNCCINGLSKL 545
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ L+VY M +L ++ D ++NIL+ C AGN A ++ E + AK L+ D
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE---MVAKN-LQPD 601
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T+ ++ A + A + + M + GV PN +T+++L++ +G +E+A E
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRI 479
EM+ +GC P+S L+ A A + D A +L +S+ V DG
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK-- 719
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKA 534
+ +Q+IT V H+ P TYN L+ + C + R+
Sbjct: 720 ---SGQTEQAITVLEEMVGKGHH----------PDVVTYNTLIDSLCKAGDLEEARRLHG 766
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMRED-GMSPDVVAYTTAIKV 592
M+ + PN +++++LI+ G ++ A ++++ +MR+ + P+++ Y + +
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDG 826
Query: 593 CVRSKRLKQAFSLFEEMKH--YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + +A L ++ ++ P+ VT+ TL+ + G E V+ DM
Sbjct: 827 LCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN---VFDDMIAG 883
Query: 651 G 651
G
Sbjct: 884 G 884
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 189/444 (42%), Gaps = 46/444 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L + + ++ + P++ T+ID GD ++R ++ D+ S++ N+
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ A V +DM++ G PN IT+++L+N
Sbjct: 348 SLR----DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 403
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSK 463
A +E+A + E M+ G P+ ++L+ A +A + D A L S +
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 463
Query: 464 TQVALGEDYDG--NTDRISN-MEHKDKQSITNTPNFVPN--SHYSSFDKRFSF------- 511
V DG +DR + D ++ + VP+ ++ + D F
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH--GLVPDKITYCTLIDGLFRTGRAGQAE 521
Query: 512 -------KPTTTTYNILMKACCT-------DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P T +N CC D R + N M + L P+ +++ ILI
Sbjct: 522 ALLDAMPDPDTYAFN-----CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN E A + + M + PDV+ + I ++ +++ A + + M + + PN
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+VTY L+ + G + E Q L
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFL 660
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 207/531 (38%), Gaps = 87/531 (16%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L K GR+EE +E +V S G V + SL + R R D +
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSL------VYALCRASRTDDAL 692
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ +L G P D + +L + L SG+ E + VLEE
Sbjct: 693 QLVSELKSFGWDP----DTVTYNILVD---GLWKSGQTEQAI---TVLEEM--------- 733
Query: 194 EFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
V K PDV + + + K DL A R +
Sbjct: 734 --------VGKGHHPDV--------------VTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Query: 251 LSS---PNMYICRTIIDVCGIC--GDYMKSRAIYEDL--RSQNVTLNIYVFNSLMN--VN 301
+S PN+ +I+ G+C G ++R + +++ +S +V NI +NS ++
Sbjct: 772 VSRCCVPNVVTYSVLIN--GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 302 AHDLKFTLEVYKNMQ--KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
+ E+ ++++ L V D +++ L+ C G T A ++ + + A G +
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD---MIAGGYV 886
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+V TY+ ++ + A + E M+ GVTP+ IT+S L++A A V++A+
Sbjct: 887 P-NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALE 945
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L M GC PN N ++ ++ Q AF++F TL Y D +
Sbjct: 946 LLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Query: 480 SNMEHKDK-----QSITNTPNFVPNSHYSSFDK------------RFSFKPTTTTYNILM 522
+ ++ + + N + K P T+NIL+
Sbjct: 1006 FRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILI 1065
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
C ++ + AL EM L P+ +++ LID +G VE I+
Sbjct: 1066 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 156/378 (41%), Gaps = 56/378 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M + GV ++ +YNIL++ C AGN + +GE +E G L +V TY+TI+
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGE---MERNGCLP-NVVTYNTII 245
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTI------------------------------- 399
+ + A K+ M G+ PN I
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 400 ----TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++LIN N G QA+ L EM++ G PN L+ + +A +RA
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME- 364
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F + G Y D S KQ+ V N F PT
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFL-KQAYQIMKEMVENG----------FTPTI 413
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C L+ EM G P+ +S++ +I + +E A Q+
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G+SPDV Y++ I+ + +RL + LF+EM + P+ VTY +L+ A G
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 634 LHEVQQCLAVYQDMWKAG 651
L + L ++ +M + G
Sbjct: 534 L---DKALRLHDEMIQKG 548
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 183/403 (45%), Gaps = 37/403 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SPN+Y +I G+ + ++ N+ +N++++ L+ E +
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC-KLRKIGEAF 258
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K ++ + G+ ++ SYN+++ C G EI E+ +K D T++T+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----SKRRYVPDRVTFNTL 314
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + AL + +M+ G++PN +T+++LIN+ AG + +AM ++M G
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN--TDRISNMEH 484
PN + L+ + +A+++ + + T + +G+ R+ +
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 485 KDKQSITNTPNFVPNS-HYSS----------FDKRFSFK---------PTTTTYNILMKA 524
++ I F+P+ YS+ +K F K P TY+ L++
Sbjct: 435 LLQEMIER--GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 525 CCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C V L EM ++GL P+ +++T LI+A G+++ AL++ M + G SPD
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+V Y I + R K+A L ++ + + PN +TY TL+
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 54/375 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K +L A+ D + PN T+ID G ++ I ++
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ T I +N+L +N H + +E + + M + G + D+ SY+ ++ C
Sbjct: 404 MVENGFTPTIITYNAL--INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-- 459
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L + +V+ + AKG+ DV TYS++++ + + ++MLS G+ P+
Sbjct: 460 RNQELEKAFQLKVE-MVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SLINA G +++A+ L +EM+Q G P+ N+L+ + + A RL
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + V Y+ D +N+E K +
Sbjct: 578 KL-LYEESVPNEITYNTLIDNCNNLEFKSALA---------------------------- 608
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LMK C +K LMNE M G N + ++I GN+E A +
Sbjct: 609 ---LMKGFC-----MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
Query: 571 LKIMREDGMSPDVVA 585
K M G +P V
Sbjct: 661 YKEMLHSGFAPHSVT 675
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K + F P +YN ++ A VK + EM G+SPN ++ ILI +GN
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E L M +G P+VV Y T I + +++ +AF L M + PNL++Y
Sbjct: 219 LEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 624 LLRARSRYGSLHEVQQCL 641
++ R G + E + L
Sbjct: 279 VINGLCREGQMKETSEIL 296
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 40/277 (14%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ KG +L+V Y+ ++++ A+ W + ++M+S G+TP T+ +LI+ + G
Sbjct: 186 LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGG 245
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L E+A+H + M + G EP+ +++Q +A +F +A + F++W+L
Sbjct: 246 LTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESAS------- 298
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
Q ++ N+ ++ K + + T+ +++
Sbjct: 299 ---------------QPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-------- 335
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G+ PN +++ +I CG G +E A +++ M E PD Y I +
Sbjct: 336 ----------GIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISL 385
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + +A S F++MK +++P+LV+Y TLL A S
Sbjct: 386 HAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFS 422
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 169/406 (41%), Gaps = 27/406 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-----EDLRSQNVTLNIYVF 294
AL D K P+ ++ G++ K+ + E +V L+ Y +
Sbjct: 250 ALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTY 309
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L++ A L+ + + M + G++ + ++N ++ C G A + +++
Sbjct: 310 NTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEE 369
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L D TY+ ++ + A A + M A + P+ +++ +L+ A +
Sbjct: 370 LRCPP----DTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRH 425
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
LV +A L EM + G E + + L + +EA +++ FR + L + E Y
Sbjct: 426 LVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSS--ECY 483
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYY 530
N D H + + + + S K + +N+++KA Y
Sbjct: 484 SANIDAYGERGH------------ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYE 531
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L++ M G+ P+ S+ LI + A L M+E + D + Y I
Sbjct: 532 KACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVI 591
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ +L+ A LF+EM Y +QP++V Y L+ A + G++ E
Sbjct: 592 SSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVRE 637
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 180/447 (40%), Gaps = 47/447 (10%)
Query: 230 EFGKKRDLVSALRAYDASKKH--LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
EF K AS+ H LSS Y T+ID G G ++ + + + +
Sbjct: 281 EFKKAEQFFKNWSLESASQPHVCLSS---YTYNTLIDTYGKAGQLREASDTFAWMLREGI 337
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N FN+++++ N L+ + + M++L D +YNIL+ N A
Sbjct: 338 IPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAAS 397
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++K EA+ L+ D+ +Y T++ F+ A + +M G+ + T S+L
Sbjct: 398 YFKKMK--EAR--LEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALT 453
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----RSWTL 461
AG+++++ F G +S+C + + A E A + F S L
Sbjct: 454 RMYIEAGMLKKSWLWFRRFHLEG-NMSSECYSANIDAYGERGHILEAEKAFLCCKESRKL 512
Query: 462 SKTQV-------ALGEDYDGNTDRISNMEHK----DKQSITNTPNFVPNSHYSSFDKRFS 510
S + + Y+ I +ME+ DK S + + ++ K +
Sbjct: 513 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 572
Query: 511 FKPTTTTYNILMKACCTDYYRV-------------KALMNEMRTVGLSPNHISWTILIDA 557
K T + + C Y V + L EM + P+ + + ILI+A
Sbjct: 573 MKMQETQ----LVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINA 628
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GNV A+ + +R G+ + V Y + IK+ + L++A ++ ++ ++ P+
Sbjct: 629 FADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPD 688
Query: 618 LVT---YITLLRARSRYGSLHEVQQCL 641
+ + I L RS E+ + L
Sbjct: 689 VYSSNCMIDLYSERSMVKQAEEIFESL 715
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 62/321 (19%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ +M+ GV+ D SYN L++ LA + + + +K E + L D Y +
Sbjct: 535 QLIDSMENHGVLPDKFSYNSLIQ--ILASADLPHKAKFYLMKMQETQ--LVSDCIPYCAV 590
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F +MA + ++M+ V P+ + + LINA A+ G V +A++ + AG
Sbjct: 591 ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGL 650
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ N L++ + + A ++ L ++V
Sbjct: 651 PMNAVIYNSLIKLYTKVGYLEEAQEAYK--MLQASEVG---------------------- 686
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS---- 545
P+ + S+ C D Y ++++ + + S
Sbjct: 687 --------PDVYSSN--------------------CMIDLYSERSMVKQAEEIFESLKRK 718
Query: 546 --PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
N S+ +++ G ++ A QI++ MRE G+ D+++Y + R K A
Sbjct: 719 GDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAV 778
Query: 604 SLFEEMKHYQIQPNLVTYITL 624
F+EM IQP+ T+ +L
Sbjct: 779 GTFKEMIEAAIQPDDCTFKSL 799
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 42/188 (22%)
Query: 502 YSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ K+ ++ YNI+++ ++ V++L +EM + G++P + ++ LID
Sbjct: 183 FEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYS 242
Query: 560 GSGNVEGALQILKIMREDGMSPDVVA---------------------------------- 585
G E AL L M + GM PD V
Sbjct: 243 KGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHV 302
Query: 586 ------YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y T I ++ +L++A F M I PN VT+ T++ +G L E
Sbjct: 303 CLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAAS 362
Query: 640 CLAVYQDM 647
+ +++
Sbjct: 363 LMQKMEEL 370
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 66/415 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-- 299
+D +KH PN ++ G+C G ++A+YE + + ++ +N+L++
Sbjct: 73 FDGMRKHGFWPNRITYNALLS--GLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
L L+++ K G + D+ +YN L+ C A AQ I ++ + ++ ++
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI---LQRMVSESLV 187
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAM 418
DV TY+++V A + ++ G +PN IT+S+LI+ C +E A
Sbjct: 188 P-DVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESAR 243
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L E+M+ GC+P+ N L+ A +LF S
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL------------------ 285
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
R ++P TYNIL+ + +A L
Sbjct: 286 -----------------------------RQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ + GL P+ I++T+ ID +G VE AL +LK M E G PDVV++ I +
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
KR+ +A L M+ PN +++ TL+ + R G ++ + +++M K G
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW---KKAMTTFKEMLKRG 428
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 169/410 (41%), Gaps = 68/410 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMK---SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT- 308
SPN+ T+I G+C + + +R + E + +I +N+L++ A + +
Sbjct: 219 SPNVITYSTLIS--GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276
Query: 309 -LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTY 366
L+++ ++ + G ++ +YNIL+ A E++ G VKH L+ D TY
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH-----GLEPDAITY 331
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A + AL + +DM G P+ ++ +++IN V++A L M
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC PN+ N L+ A ++ +A F+
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML-------------------------- 425
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK---ALMNEMRT 541
KR KPT TYNIL+ C R+K L + M
Sbjct: 426 --------------------KR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ ++++ LID G +G ++ A ++L M G P+V Y + I ++ +
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A LF M P+ +TY T++ A + V + LA++ +AG
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQ---EMVDKALALFDGSLEAG 571
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 156/409 (38%), Gaps = 67/409 (16%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV----TLNIYVFNSLMNVNAHDL 305
+ SP+ Y ++ G K+ E L + + T NIY+ D
Sbjct: 10 RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDA 69
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ V+ M+K G + +YN LL C G AQ +Y + K DV T
Sbjct: 70 Q---TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM----IKAGYSPDVVT 122
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ F ALK+ + + G P+ +T+++LIN A +++A + + M+
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ N L+ + + D A L
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLI----------------------------- 213
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTV 542
DK FS P TY+ L+ C + R+++ L+ +M
Sbjct: 214 -------------------VDKGFS--PNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +S+ LI V AL++ + G P+V Y I ++ R+ +A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F LF + + ++P+ +TY + + G V+ L + +DM + G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDALLMLKDMDEKG 358
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 13/212 (6%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDL 305
SPN T+I CG C G + K+ ++++ + V + +N L++ +
Sbjct: 395 SPNAISFNTLI--CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K + ++ M + G + D+ +Y+ L+ AG A+ + G +EAKG + +V+T
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA---MEAKGCIP-NVYT 508
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ AL++ M+ G P+TIT+ ++I+A +V++A+ LF+ L
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+AG P S L+ + D A +L +
Sbjct: 569 EAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 59/433 (13%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF---------- 307
+ II V G G + ++ DLR+ V ++IY + SL+ A + ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 308 --------------TLEVY--------------KNMQKLGVMADMASYNILLKACCLAGN 339
L VY +M+ GV D+ +YN L+ +C
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E+K A G D TY+ ++ V+ ++ + A++V ++M ++G P+ +
Sbjct: 307 YEEAAEVFEEMK---AAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+A A GL+++AM L +M++ G +P+ LL + + D A ++F
Sbjct: 363 TYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ Q + + + M N NFV K P T+N
Sbjct: 423 RVAGCQPNI-----CTFNALIKMH-------GNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI A G + A+ I + M +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++PD+ Y + R +Q+ + EMK + +PN +TY +LL A Y + EV
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA---YANGKEV 587
Query: 638 QQCLAVYQDMWKA 650
++ A+ ++++
Sbjct: 588 ERMSALAEEIYSG 600
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 182/395 (46%), Gaps = 30/395 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ ++ + PN+ +I + G G++++ ++E+++ +I +N+L+
Sbjct: 415 AMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V N D + + V+K M++ G + + ++N L+ A G A IY + +
Sbjct: 475 VFGQNGMDSEVS-GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY---RRMLDA 530
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV D+ TY+ ++ A W+ + KV +M PN +T+ SL++A AN VE+
Sbjct: 531 GVTP-DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYD 473
L EE+ EP + L+ ++ + +RAF R S L
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA--- 646
Query: 474 GNTDRISNMEHKDKQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYY- 530
+S + S TN NF+ +S F P+ TTYN LM T+++
Sbjct: 647 ----MVSIYGRRRMVSKTNEILNFIKDS---------GFTPSLTTYNSLMYMYSRTEHFE 693
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + ++ E+ G+ P+ IS+ +I A +G ++ A +I M++ G++PDV+ Y T I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+A + + M + +PN TY +L+
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLI 788
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 193/467 (41%), Gaps = 70/467 (14%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D+ K +P++Y T+I C Y ++ ++E++++ + + +N+L++V +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ +EV K M+ G + +YN L+ A G +L + + E+K K +K D
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDG--LLDEAM--ELKSQMVKKGIKPD 395
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT------------------------ 398
VFTY+T++ F A+KV E+M AG PN
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 399 -----------ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+TW++L+ G+ + +F+EM +AG P N L+ A
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 448 QFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
FD+A ++R ++ +A G ++ + ++ M KD + N
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM--KDGRCKPNELT 573
Query: 496 FVPNSHYSSFDK---RFS------FKPTTTTYNILMKACCTDYYRVKALMN------EMR 540
+ H + K R S + +L+K Y + L E+R
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR 633
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G SP+ + ++ G V +IL +++ G +P + Y + + + R++ +
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + E+ ++P+++++ T++ A R G + E + A +D
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDF 740
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 31/320 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQA 417
+ +D++ Y++++ +A ++ A+ V + + G P IT++ ++N G+ +
Sbjct: 216 VHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKI 275
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQV---ALGED 471
L + M +G P+ N L+ +C ++ A +F ++ S +V AL +
Sbjct: 276 AGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV 335
Query: 472 YDGNTDRISNME-HKDKQSITNTPNFVP-NSHYSSFDK---------------RFSFKPT 514
Y + ME K+ ++ P+ V NS S++ + + KP
Sbjct: 336 YGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Query: 515 TTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ D Y +K + EMR G PN ++ LI G GN +++
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMK-VFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++ PD+V + T + V ++ + +F+EMK P T+ TL+ A SR
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC 514
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G Q +A+Y+ M AG
Sbjct: 515 GFF---DQAMAIYRRMLDAG 531
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ I+ +L V + K L RA+ ++ SP++ ++ + G
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I ++ T ++ +NSLM + + F + ++ + + G+ D+ S+N +
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V + M+
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFG----LAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 391 SAGVTPNTITWSSLIN 406
PN T++SLI+
Sbjct: 774 KNECKPNQNTYNSLID 789
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y+ M G D+ +YNIL+ C G A + E +E KG ++ TYST+
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE---MEEKGCAP-NIVTYSTL 392
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F W A + + M + G + N+ ++ +I A G +++AM L +EM GC
Sbjct: 393 LHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGC 452
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-- 487
+P+ N ++ Q D A +F + L + VA G Y+ I + H +
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGN-LLEEGVVANGITYN---TLIHALLHSGRWQ 508
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
+ + V H D +YN L+KA C + R L+ EM T G+
Sbjct: 509 EGLRLANEMV--LHGCPLD--------VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIK 558
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+ S+ +LI+ +G V AL++ K M G++PD+V Y T I + A +L
Sbjct: 559 PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNL 618
Query: 606 FEEMKHYQIQPNLVTYITLL 625
E++ + + P++VTY L+
Sbjct: 619 LEKLPNENVHPDIVTYNILI 638
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 26/324 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R D ++ +PN+ T++ G + +RA+ + + ++ ++N +N ++
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D K + + + M+ G D+ +YN ++ C A+ I+G +L +
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG---NLLEE 485
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+T++ + WQ L++ +M+ G + ++++ LI A G V++
Sbjct: 486 GVVA-NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDR 544
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+M L EEM+ G +PN+ N+L+ E C +A ++ + LSK + G D T
Sbjct: 545 SMMLLEEMMTKGIKPNNFSYNMLIN---ELC---KAGKVRDALELSKEMLNQGLTPDIVT 598
Query: 477 -DRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ + N K + N +PN + P TYNIL+ C
Sbjct: 599 YNTLINGLCKVGWTHAALNLLEKLPNE---------NVHPDIVTYNILISWHCKVRLLDD 649
Query: 534 A--LMNEMRTVGLSPNHISWTILI 555
A L+++ + G+ PN +W +++
Sbjct: 650 ASMLLDKAVSGGIVPNERTWGMMV 673
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 171/437 (39%), Gaps = 52/437 (11%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
G+ RD ++ LR +H P+ + +T+I G ++ + +++
Sbjct: 192 RLGRARDALALLRGM---ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248
Query: 290 NIYVFNS--LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ FN L ++ + M G + +Y LL+ C T A E Y
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC---RTRQADEAY 305
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ V +++V +T+++ A+ K + A ++ E M S G P+ T++ L++
Sbjct: 306 AMLGR-----VPEVNVVMLNTVIRGCLAEGKLAR-ATELYEMMGSKGCPPDVHTYNILMH 359
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---------- 456
G A+ + +EM + GC PN + LL + +D A +
Sbjct: 360 GLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM 419
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S + ALG+D G D + + K KP
Sbjct: 420 NSQGYNGIIYALGKD--GKLDEAMRLVQEMKSQ--------------------GCKPDIC 457
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN ++ C + +A + + G+ N I++ LI A SG + L++ M
Sbjct: 458 TYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G DVV+Y IK + + ++ L EEM I+PN +Y L+ + G
Sbjct: 518 VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAG-- 575
Query: 635 HEVQQCLAVYQDMWKAG 651
+V+ L + ++M G
Sbjct: 576 -KVRDALELSKEMLNQG 591
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYM-KSRAIYED 281
+ + GK L A+R K P++ TII +C D M ++ I+ +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN--NDQMDEAEHIFGN 481
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L + V N +N+L++ H ++ L + M G D+ SYN L+KA C GN
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ + E + KG+ K + F+Y+ ++ A + AL++ ++ML+ G+TP+ +
Sbjct: 542 VDRSMMLLEE---MMTKGI-KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 597
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
T+++LIN G A++L E++ P+ NIL+
Sbjct: 598 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 154/388 (39%), Gaps = 33/388 (8%)
Query: 271 DYMKSR-AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
D M R A+ RS N V ++L + H L +Y+ M + V ++ +
Sbjct: 133 DQMPRRFAVTPSFRSYNA-----VLSTLARADCH--ADALLLYRRMLRDRVPPTTFTFGV 185
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+A C G A++ ++ + G + D Y T++ A + ++M
Sbjct: 186 AARALCRLGR---ARDALALLRGMARHGCVP-DAVLYQTVIHALVAQGGVAEAATLLDEM 241
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G + T++ ++ G V +A L + M+ GC P+ LL+ Q
Sbjct: 242 LLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301
Query: 450 DRAF----RLFRSWTLSKTQVALGEDYDGNTDRISN----MEHKDKQSITNTPNFVPN-- 499
D A+ R+ + V G +G R + M K +T N + +
Sbjct: 302 DEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Query: 500 -------SHYSSFDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
S D+ P TY+ L+ + C + + +A++++M G S N
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +I A G G ++ A+++++ M+ G PD+ Y T I + ++ +A +F
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + N +TY TL+ A G E
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQE 509
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 53/414 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FGK+RD+ + L + H PN+Y I V G ++R E R
Sbjct: 284 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG------QARRFDEAYR------- 330
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ M+ G D+ ++ +L++ C AG A++++ ++
Sbjct: 331 --------------------ILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 370
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K K D TY T++ FAD Q +++ M + G N + ++++I+A
Sbjct: 371 K----KSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 426
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A+ +F+EM Q G P N L+ ++A +F A LF+ + G
Sbjct: 427 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIH------GP 480
Query: 471 DYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+G T + N K +SI + K P N ++
Sbjct: 481 KPNGYTHVLFINYYGKSGESIKAIQRY-------ELMKSKGIVPDVVAGNAVLFGLAKSG 533
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
K + +E++ +G+SP+ I++T++I C + + A++I M E+ PDV+
Sbjct: 534 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVN 593
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ I ++ R +A+ +F ++K ++P TY TLL R G + EV L
Sbjct: 594 SLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 647
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 203/484 (41%), Gaps = 80/484 (16%)
Query: 189 KELDEEFRIVQLCVN---KPDV---NLAIRYACIVPRAD------------------ILF 224
+ DE +RI+ N KPDV + I+ C R + +
Sbjct: 323 RRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 382
Query: 225 CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+ +F + S + ++A K + N+ +ID G ++ ++++++
Sbjct: 383 ITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + Y +NSL++ + A LE++K M G + ++ + + +G ++
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + Y + +++KG++ DV + ++ A + MA +V ++ + GV+P+TIT++
Sbjct: 503 AIQRY---ELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 558
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I C+ A ++A+ +F +M++ C P+ N L+ +A + D A+++F
Sbjct: 559 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL--- 615
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K + +PT TYN L+
Sbjct: 616 --------------------------------------------KEMNLEPTDGTYNTLL 631
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ V L+ EM PN I++ ++D +G V AL +L M G
Sbjct: 632 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 691
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD+ +Y T I V+ +R +AFS+F +MK I P+ T T+L + + G + E
Sbjct: 692 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 750
Query: 641 LAVY 644
+ Y
Sbjct: 751 IKEY 754
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 170/383 (44%), Gaps = 56/383 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
+ ++C I +C +++ + + +S V+L +NSL+ V+ + + ++
Sbjct: 799 DFFLCPLIKHLCKQ-KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLF 857
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++LG D +YN+LL A G ++ +E+ + + KG V TY+TI+
Sbjct: 858 AEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYV-TYNTIISG 913
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ + A+ + +++S G +P T+ L++ AG +E A +LF EML+ GC+ N
Sbjct: 914 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 973
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
NILL G GNT+++ ++ Q + +
Sbjct: 974 CTIYNILLN---------------------------GHRIAGNTEKVCHL----FQDMVD 1002
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
P +Y I++ C L ++ +GL P+ I+
Sbjct: 1003 Q----------------GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LID G S +E A+ + M++ G+ P++ Y + I ++ + +A ++EE+
Sbjct: 1047 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1106
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+PN+ TY L+R S GS
Sbjct: 1107 TKGWKPNVFTYNALIRGYSVSGS 1129
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 159/390 (40%), Gaps = 74/390 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMA 325
KS E + S +TL+ + L+ + AH E+ K + GV
Sbjct: 782 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH------ELVKKFKSFGVSLKTG 835
Query: 326 SYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN L+ C L ++ A+ ++ E+K L D FTY+ ++ + + L
Sbjct: 836 SYNSLI--CGLVDENLIDIAEGLFAEMKELGCGP----DEFTYNLLLDAMGKSMRIEEML 889
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV+E+M G +T++++I+ + +EQA+ L+ ++ G P LL
Sbjct: 890 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 949
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++A + + A LF
Sbjct: 950 LKAGRIEDAENLFNEML------------------------------------------- 966
Query: 504 SFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ K T YNIL+ + +V L +M G++P+ S+TI+ID +
Sbjct: 967 ----EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + L + + E G+ PD++ Y I +SKRL++A SLF EM+ I PNL TY
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ + G E + +Y+++ G
Sbjct: 1083 NSLILHLGKAGKAAEAGK---MYEELLTKG 1109
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 190/463 (41%), Gaps = 56/463 (12%)
Query: 225 CNFV----REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
CN++ R+ G+ D+ +D ++ + N+ I G+ G +
Sbjct: 172 CNYMLDLMRDHGRVGDMA---EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALP 228
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + LN Y +N L+ V + + LEVYK M GV+ + +Y++L+ A G
Sbjct: 229 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVA---FG 285
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ + ++ +EA GV K +V++Y+ ++V A+ + A ++ +M + G P+
Sbjct: 286 KRRDVETVLWLLREMEAHGV-KPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDV 344
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ----------------- 441
IT + LI +AG + A +F +M ++ +P+ LL
Sbjct: 345 ITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNA 404
Query: 442 --------------ACVEA-CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
A ++A CQ R F + K + + E Y N+ IS D
Sbjct: 405 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS-LISGFLKAD 463
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE--MRTVGL 544
+ F + KP T+ + + +KA+ M++ G+
Sbjct: 464 R--------FGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 515
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ ++ ++ SG + A ++ ++ G+SPD + YT IK C ++ + +A
Sbjct: 516 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 575
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F +M P+++ +L+ + G E Q ++M
Sbjct: 576 IFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEM 618
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 175/429 (40%), Gaps = 65/429 (15%)
Query: 236 DLVSALRAYDASKKHLSS-------PNMY----ICRTIIDVCGICGDYMKSRAIYEDLRS 284
D++ ALR+ D + L P + C ++D+ G +++ ++
Sbjct: 138 DVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQR 197
Query: 285 QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q V N+ F ++ + L+ M++ G++ + +YN L+ +G
Sbjct: 198 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 257
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+Y K + GV+ V TYS ++ F + + L + +M + GV PN +++
Sbjct: 258 ALEVY---KVMMVDGVVP-SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 313
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
I A ++A + EM GC+P+ +L+Q +A + A +F W +
Sbjct: 314 ICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF--WKMK 371
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K+ D DR++ + DK F N S
Sbjct: 372 KS--------DQKPDRVTYITLLDK--------FADNGESQS------------------ 397
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
V + N M+ G + N +++T +IDA G V AL++ M++ G+ P+
Sbjct: 398 ---------VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 448
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+Y + I +++ R A LF+ M + +PN T++ + + YG E + +
Sbjct: 449 QYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFI---NYYGKSGESIKAIQ 505
Query: 643 VYQDMWKAG 651
Y+ M G
Sbjct: 506 RYELMKSKG 514
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
I G+ K +++D+ Q + +I + +++ A L L ++ + ++G+ D+
Sbjct: 986 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1045
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN+L+ G + +E ++ KG++ +++TY++++ A A K+
Sbjct: 1046 TYNLLIDGL---GKSKRLEEAVSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAEAGKM 1101
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
E++L+ G PN T+++LI + +G + A + M+ GC PNS C+I
Sbjct: 1102 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ Y SP ++D G + ++ ++ N
Sbjct: 916 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 975
Query: 293 VFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+N + A + + ++++M G+ D+ SY I++ C AG + ++
Sbjct: 976 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 1035
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L+ D+ TY+ ++ +K + A+ + +M G+ PN T++SLI
Sbjct: 1036 LEMG----LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1091
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG +A ++EE+L G +PN N L++ + D A+ +
Sbjct: 1092 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1137
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 59/433 (13%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF---------- 307
+ II V G G + ++ DLR+ V ++IY + SL+ A + ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 308 --------------TLEVY--------------KNMQKLGVMADMASYNILLKACCLAGN 339
L VY +M+ GV D+ +YN L+ +C
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E+K A G D TY+ ++ V+ ++ + A++V ++M ++G P+ +
Sbjct: 307 YEEAAEVFEEMK---AAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+A A GL+++AM L +M++ G +P+ LL + + D A ++F
Sbjct: 363 TYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ Q + + + M N NFV K P T+N
Sbjct: 423 RVAGCQPNI-----CTFNALIKMH-------GNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI A G + A+ I + M +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++PD+ Y + R +Q+ + EMK + +PN +TY +LL A Y + EV
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA---YANGKEV 587
Query: 638 QQCLAVYQDMWKA 650
++ A+ ++++
Sbjct: 588 ERMSALAEEIYSG 600
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 30/395 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ ++ + PN+ +I + G G++++ ++E+++ +I +N+L+
Sbjct: 415 AMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
V N D + + V+K M++ G + + ++N L+ A G A IY + +
Sbjct: 475 VFGQNGMDSEVS-GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY---RRMLDA 530
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV D+ TY+ ++ A W+ + KV +M PN +T+ SL++A AN VE+
Sbjct: 531 GVTP-DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYD 473
L EE+ EP + L+ ++ + +RAF R S L
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA--- 646
Query: 474 GNTDRISNMEHKDKQSITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYY- 530
+S + S TN NF+ +S F P+ TTYN LM T+++
Sbjct: 647 ----MVSIYGRRRMVSKTNEILNFIKDS---------GFTPSLTTYNSLMYMYSRTEHFE 693
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + ++ E+ G+ P+ IS+ +I A +G ++ A +I M++ G++PDV+ Y T I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+A + + M +PN TY +L+
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLI 788
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 193/467 (41%), Gaps = 70/467 (14%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NA 302
D+ K +P++Y T+I C Y ++ ++E++++ + + +N+L++V +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+ +EV K M+ G + +YN L+ A G +L + + E+K K +K D
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDG--LLDEAM--ELKSQMVKKGIKPD 395
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT------------------------ 398
VFTY+T++ F A+KV E+M AG PN
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 399 -----------ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+TW++L+ G+ + +F+EM +AG P N L+ A
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 448 QFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
FD+A ++R ++ +A G ++ + ++ M KD + N
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM--KDGRCKPNELT 573
Query: 496 FVPNSHYSSFDK---RFS------FKPTTTTYNILMKACCTDYYRVKALMN------EMR 540
+ H + K R S + +L+K Y + L E+R
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR 633
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G SP+ + ++ G V +IL +++ G +P + Y + + + R++ +
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + E+ ++P+++++ T++ A R G + E + A +D
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDF 740
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 31/320 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQA 417
+ +D++ Y++++ +A ++ A+ V + + G P IT++ ++N G+ +
Sbjct: 216 VHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKI 275
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQV---ALGED 471
L + M +G P+ N L+ +C ++ A +F ++ S +V AL +
Sbjct: 276 AGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV 335
Query: 472 YDGNTDRISNME-HKDKQSITNTPNFVP-NSHYSSFDK---------------RFSFKPT 514
Y + ME K+ ++ P+ V NS S++ + + KP
Sbjct: 336 YGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Query: 515 TTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ D Y +K + EMR G PN ++ LI G GN +++
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMK-VFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ ++ PD+V + T + V ++ + +F+EMK P T+ TL+ A SR
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC 514
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G Q +A+Y+ M AG
Sbjct: 515 GFF---DQAMAIYRRMLDAG 531
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ I+ +L V + K L RA+ ++ SP++ ++ + G
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I ++ T ++ +NSLM + + F + ++ + + G+ D+ S+N +
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V + M+
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFG----LAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 391 SAGVTPNTITWSSLIN 406
G PN T++SLI+
Sbjct: 774 KNGCKPNQNTYNSLID 789
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 187/446 (41%), Gaps = 45/446 (10%)
Query: 195 FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
F + L V D+ + + R+D VRE R L L A S + +
Sbjct: 322 FPVSNLNVADADLRSPLHRSASQHRSDGSLAPQVREIRSTRQLNKILSALYKSGRAADA- 380
Query: 255 NMYICRTI-------IDVC---------GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+ +CR + IDV G CG ++ ++ + V N + F++L
Sbjct: 381 -LSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALF 439
Query: 299 NVNAHDLKFTLEVYKNMQKLGVM----ADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
D F + + Q + ++ YN +LK AG A ++ G+ +E
Sbjct: 440 GA-LTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQ---ME 495
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++ D+ TY TI+ + A + +A V + M G+ PN ++SLI+ACA AGL
Sbjct: 496 QNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLP 555
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA LF ++ G E + CN LL A A +RAF+ F ++ G+
Sbjct: 556 DQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEM---RSAGVRGDRITF 612
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR- 531
NT + ++ + + +F+ K+ + TTYN L+ AC
Sbjct: 613 NTLITAAARAREF-----------DKAWKAFETMKKSNISADATTYNALIDACSKSGMTE 661
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
AL NEMR L P ++ LI AC ++ A Q+L +M G+ PD +
Sbjct: 662 LAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILL 721
Query: 591 KVCVRSKRLKQAFSLFEEMK-HYQIQ 615
C R++ A SL E + +Y+++
Sbjct: 722 TACARNEDFDYAISLVREFETNYRVR 747
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 54/302 (17%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E +G +++DV +YS ++ A+++ M+ GV PN T+S+L A +
Sbjct: 387 VEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGA 446
Query: 413 LVEQAMHLFEEMLQAGC--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+QAM LF+ M++A E N N +L+ A + D A
Sbjct: 447 FFDQAMRLFQ-MIRASYPNELNVVVYNAVLKYVGRAGRIDAAL----------------- 488
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
D + ME + +P TY ++ C D
Sbjct: 489 ------DLLGQMEQNR-----------------------NVQPDIVTYGTILDICAKKQD 519
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A+++ MR G+ PN+ + LIDAC +G + A + + +R +G+ D+
Sbjct: 520 VSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNA 579
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ R+K +++AF FEEM+ ++ + +T+ TL+ A +R E + ++ M
Sbjct: 580 LLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAAR---AREFDKAWKAFETMK 636
Query: 649 KA 650
K+
Sbjct: 637 KS 638
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 139/347 (40%), Gaps = 55/347 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M + GV + +++ L A A ++ + + A +L+V Y+
Sbjct: 417 IEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLF---QMIRASYPNELNVVVYNA 473
Query: 369 IVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K A AL + M + V P+ +T+ ++++ CA V A + + M +
Sbjct: 474 VLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKR 533
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G PN+ C L+ AC A D+A LFR A G +YD
Sbjct: 534 GMRPNNFCYASLIDACARAGLPDQAESLFRQLR------AEGLEYD-------------- 573
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
F+ N+ +F + + R EMR+ G+ +
Sbjct: 574 -------LFICNALLGAFARAKMVE------------------RAFQAFEEMRSAGVRGD 608
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LI A + + A + + M++ +S D Y I C +S + AF+LF
Sbjct: 609 RITFNTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFN 668
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
EM+ +QP + T+ L+ A ++ + Q L VY D +
Sbjct: 669 EMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTF 715
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 192/468 (41%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 273 LVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEEL 332
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 333 RQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 392
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + E++ G ++ + F +S ++ + D WQ +V ++M S GV P+
Sbjct: 393 ESARIVLKEME----TGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQF 448
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 496
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 497 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 521
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 522 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 581
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 582 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 641
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G
Sbjct: 642 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPGVYEEMIMSG 686
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 48/405 (11%)
Query: 274 KSRAIYED-LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+S +YE L SQ TL +N+L+ A +D++ L + M++ G +D +Y+++
Sbjct: 181 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLV 240
Query: 331 LKAC--CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+++ C ++V+ Q +Y E++ + L+LDV + I+ FA + AL++
Sbjct: 241 IQSLTRCNKIDSVMLQRLYKEIE----RDKLELDVQLVNDIIMGFAKSGDPSRALQLLGM 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ G++ T T S+I+A AN+G +A LFEE+ Q+G +P ++ N LL+ V+
Sbjct: 297 AQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGP 356
Query: 449 FDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR-------ISNMEHKDKQSITNTPN- 495
A + R + + +L D N R + ME D Q PN
Sbjct: 357 LKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQ-----PNS 411
Query: 496 FVPNSHYSSFDKR---------------FSFKPTTTTYNILM----KACCTDYYRVKALM 536
FV + + + R KP YN+++ K C D+
Sbjct: 412 FVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH--AMTTF 469
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M + G+ P+ ++W LID G A ++ + M G P Y I
Sbjct: 470 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 529
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+R L +MK I PN+VT+ TL+ + G ++ +CL
Sbjct: 530 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 574
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
PN ++ ++ G++ K+ + ++++S V + +N +++ + L +
Sbjct: 409 PNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 468
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D ++N L+ C G ++A+E++ + +E +G L TY+ ++
Sbjct: 469 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAMERRGCLPCAT-TYNIMIN 524
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ D + W ++ M S G+ PN +T ++L++ +G A+ EEM G +P
Sbjct: 525 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 584
Query: 432 NSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+S N L+ A + + Q AFR+ S L + +AL + + + +D +
Sbjct: 585 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE-----DRRDAE 639
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ + K KP TY LMKA + +V + EM G P
Sbjct: 640 AFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKP 689
Query: 547 NHISWTILIDA 557
+ + ++L A
Sbjct: 690 DRKARSMLRSA 700
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 172 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLISRMRQ 227
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAF--SLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ R ++ L++E++ +++ ++ ++ ++ G
Sbjct: 228 DGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 287
Query: 635 HEVQQCLAVYQ 645
Q L + Q
Sbjct: 288 SRALQLLGMAQ 298
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 52/408 (12%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + G+ ++ ALR +++++ +Y +I G G + + ++ +
Sbjct: 180 LVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSM 239
Query: 283 RSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
RS V N+ +NSL++ A D ++ + M G++ D +YN LL C G
Sbjct: 240 RSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGM 299
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQ++ E ++ KG+++ D FTY+T + +A +V E+M S V P +
Sbjct: 300 WETAQKLLSE---MDQKGIVR-DAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVV 355
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S++I+ CA A L+E A++L+EEM + N ++ + +FD A
Sbjct: 356 TYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAI------ 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
G + + K + +T Y +D+
Sbjct: 410 --------------GQCKEMESCGMK-RDVVTYNALLSGYGRYGMYDE------------ 442
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
V+ L EM+ + PN ++++ +ID G + A+ + K ++ +
Sbjct: 443 ------------VRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQL 490
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DVV YT+ I ++ ++ + L M I+PN+VT+ +++ A
Sbjct: 491 EVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 173/433 (39%), Gaps = 94/433 (21%)
Query: 224 FCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ ++EFG + A + +D K++ + T+I G G+ + ++E
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R + +Y F+++++ + F+ ++++++M+ GV ++ SYN L+ A
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAG----- 258
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AKG + DV +VK F ++ML+ G+ P+ +
Sbjct: 259 ---------------AKGEVDFDV-----VVKFF-------------DEMLAEGIVPDRL 285
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL++ CA+ G+ E A L EM Q G ++ N L + Q D A R+
Sbjct: 286 TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEE- 344
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+S +V PT TY+
Sbjct: 345 -MSSRRVW---------------------------------------------PTVVTYS 358
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C AL EM+ +S + +S+ ++ G + A+ K M
Sbjct: 359 TMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESC 418
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
GM DVV Y + R + LFEEMK + I PN +TY T++ ++ G
Sbjct: 419 GMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMF--- 475
Query: 638 QQCLAVYQDMWKA 650
Q+ + VY+D KA
Sbjct: 476 QEAMDVYKDFKKA 488
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 149/357 (41%), Gaps = 51/357 (14%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M G + + +Y LL++ C A A+ ++ + + A+G +VF+YS ++
Sbjct: 40 YNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF---RGMAAQGC-SPNVFSYSILIA 95
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A ++ +M+ G PN +T+ SL++ G +++A+ LF M+ GC P
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N+L+ + A+RLF E +K I
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFE-------------------------EMLEKGCIP 190
Query: 492 NTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMKACCT--DYYRVKA 534
F NS S F ++ F P T+N L+ C D
Sbjct: 191 TV--FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EMR++G P+ +S+ LI G A ++L+ M G+ PD+V+Y I
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S L A LF E+ ++P+ +Y T++ R G +V V++DM G
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG---KVGAAFVVFKDMIANG 362
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 37/379 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
Y D+ + N Y + L+ A + V++ M G ++ SY+IL+
Sbjct: 38 GTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGL 97
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A E+ E+ G + +V TY +++ + A+ + M+ G
Sbjct: 98 CRGQKVDEAAELLNEM----IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + ++ LI+ + G + +A LFEEML+ GC P N LL +F R
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM-----EHK---DKQSITNTPNFV--------- 497
LF+ L + V ++ D M H+ + +S+ P+ V
Sbjct: 214 LFKDM-LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272
Query: 498 -----PNSHYSSFDK--RFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSP 546
P+ + R P +YNIL+ K+ D+ L E+ GL P
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH--AIKLFYEIPKSGLEP 330
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S++ +ID +G V A + K M +G +PD + R +RL ++ LF
Sbjct: 331 DAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELF 390
Query: 607 EEMKHYQIQPNLVTYITLL 625
+ M ++ P + Y L+
Sbjct: 391 QAMVKFECVPLIPEYNLLM 409
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 128/313 (40%), Gaps = 28/313 (8%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+Y+ +++V A + DML+AG PNT T+ L+ + A E+A +F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG------ 474
M GC PN +IL+ + D A L Q V G G
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 475 ---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNI 520
D S M ++ N + + D +++ PT TYN
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 521 LMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ ++ RV++L +M G PN ++ L+D G++ A ++ MR G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDVV+Y T I+ + +A L EM + P++V+Y L+ S+ G+L
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL---D 314
Query: 639 QCLAVYQDMWKAG 651
+ ++ ++ K+G
Sbjct: 315 HAIKLFYEIPKSG 327
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 117/236 (49%), Gaps = 9/236 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +++ + F KK D+ A R ++ + P ++ +++ G++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ Q NI+ FN+L++ D+ ++ M+ LG D+ SYN L++ C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G AQ + E+ + + D+ +Y+ ++ ++ + A+K+ ++ +G+
Sbjct: 274 SKGKPHEAQRLLREM----IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P+ ++S++I+ AG V A +F++M+ G P++ +++ + C+ +R
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA---VVIPLVIGLCRGER 382
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 52/257 (20%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++++ L+ A +G + + +ML AGC PN+ LL++ +A +F+ A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R P
Sbjct: 76 RGMAAQGCS-----------------------------------------------PNVF 88
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+Y+IL+ C +A L+NEM G PN +++ L+ G ++ A+ + M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G PD V Y I + + +A+ LFEEM P + TY +LL SR G
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 635 HEVQQCLAVYQDMWKAG 651
VQ ++++DM + G
Sbjct: 209 GRVQ---SLFKDMLRQG 222
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 155/372 (41%), Gaps = 65/372 (17%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMA 322
G K A+ ++ ++ + + +N++++ V A LKF M+ +G++
Sbjct: 328 GFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA-----EMRAMGLLP 382
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN +L C AGN A + G+++ + L V TY+T++ + + A
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLR----RAGLAPTVLTYNTLIDGYCRLGGLEEA 438
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++KE+M+ G P+ T++ L+N + A F+EML G +P+ N + A
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ +AF+L L
Sbjct: 499 ELILGDTHKAFQLREVMMLK---------------------------------------- 518
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T TYN+++ C + K L +M + GL P+ I++T LI A
Sbjct: 519 -------GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCE 571
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G + A ++L M DG+ P VV YT I C R L A+ F +M I+PN +T
Sbjct: 572 RGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631
Query: 621 YITLLRARSRYG 632
Y L+ A R G
Sbjct: 632 YNVLIHALCRTG 643
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 57/325 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ + AQ + E++ A G+L D+ TY++++ +
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR---AMGLLP-DLITYNSMLNGYC 395
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T+++LI+ G +E+A L EEM++ GC P+
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC 455
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL+ N HK + N P
Sbjct: 456 TYTILM----------------------------------------NGSHK----VRNLP 471
Query: 495 NFVPNSHYSSFDKRFS--FKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
FD+ S +P YN I + D ++ L M G+ P+ ++
Sbjct: 472 -----MAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVT 526
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ID +GN++ A + M DG+ PD + YT I L +A L M
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586
Query: 611 HYQIQPNLVTYITLLRARSRYGSLH 635
+QP++VTY L+ R G+L+
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLY 611
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 150/376 (39%), Gaps = 59/376 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL ++ +P + T+ID G C G ++R +
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID--GYCRLGGLEEARRLK 442
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ Q ++ + LMN + +L E + M G+ D +YN + A +
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+T A ++ EV L KG+ D TY+ I+ + A +K M+S G+ P+
Sbjct: 503 GDTHKAFQLR-EVMML--KGIYP-DTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPD 558
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A GL+ +A L M+ G +P+ IL+ C A+ FR
Sbjct: 559 CITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFR 618
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+P T
Sbjct: 619 KML-----------------------------------------------DVGIEPNEIT 631
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ A C + A +EM GL+PN ++T+LID GN A+++ M
Sbjct: 632 YNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMH 691
Query: 576 EDGMSPDVVAYTTAIK 591
++G+ PD + K
Sbjct: 692 QNGIPPDYCTHNALFK 707
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 166/420 (39%), Gaps = 49/420 (11%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L A+ H +P++ C ++ V + RA+Y ++ + I +N+L++
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252
Query: 301 ----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L Q G + + +YN+++ + LA+E HLE
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVI--------SFLARE-----GHLENA 299
Query: 357 GVL--------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
L K FTY+ ++ + + Q ++ +M + G+ P +T++++I+
Sbjct: 300 AKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQ 465
+ VE A F EM G P+ N +L +A A L R L+ T
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419
Query: 466 VALGEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ DG R+ +E + K+ + F P TY ILM
Sbjct: 420 LTYNTLIDGYC-RLGGLEEARRLKEEMVEQGCF----------------PDVCTYTILMN 462
Query: 524 AC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ + +EM + GL P+ ++ I A G+ A Q+ ++M G+ P
Sbjct: 463 GSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYP 522
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y I ++ LK A L +M +QP+ +TY L+ A G L E ++ L
Sbjct: 523 DTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLL 582
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 195/440 (44%), Gaps = 43/440 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL ++ R + ++ SP++ ++ID G G + +++ +++ +I
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N + E + M+ G+ ++ +Y+ L+ A C G + Q +
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG---MMQGAIKLL 358
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G+L + FTY++++ A A K+ DML AGV N +T+++L++
Sbjct: 359 XDMRRTGLLP-NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVA 467
AG + +A +F ML+ G PN Q L+ ++A + + A ++ + T + +
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477
Query: 468 LGEDYDGNTDRIS------NMEHKDKQSITNTP---NFVPNSHYSSFD-----------K 507
G G+ + +E + I+ P + ++++ + +
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 508 RFSFKPTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ T TY +L+ C DY+ M ++GL PN +T LID
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYF------CRMLSLGLQPNVAVYTSLIDGLC 591
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ +E A ++ M+ GM+PD+ A+T I ++ L++A L M I+ +L
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651
Query: 620 TYITLLRARSRYGSLHEVQQ 639
Y +L+ S+ G LH+ ++
Sbjct: 652 VYTSLVSGFSQCGELHQARK 671
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 170/383 (44%), Gaps = 32/383 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+++ +ID GD SR ++ +R ++ ++ +NSL++ L+
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ +G + D+ +YN L+ C A E + E+K+ LK +V TYST++
Sbjct: 287 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN----NGLKPNVVTYSTLI 342
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F Q A+K+ DM G+ PN T++SLI+A AG + +A L +MLQAG +
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQ---VALGEDYDGNTDRISNMEH 484
N LL +A + A +FRS +S Q AL Y +R+ +
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMK 461
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQ + KP Y ++ C+ K ++ EM++
Sbjct: 462 ILKQM-----------------TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 504
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+S N + T +IDA +G AL + M++ G+ +V Y I + ++ A
Sbjct: 505 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELA 564
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
F M +QPN+ Y +L+
Sbjct: 565 VDYFCRMLSLGLQPNVAVYTSLI 587
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 62/435 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D+LF FV E G L A + + + P C ++ G+ R +
Sbjct: 164 DVLFSVFV-ELGL---LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFN 219
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ + +++ +N +++ DL+ + ++ M+++G+ D+ +YN L+ G
Sbjct: 220 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ ++ E+K + G + D+ TY+ ++ + + A + +M + G+ PN
Sbjct: 280 SLEEVASLFNEMKDV---GCVP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+S+LI+A G+++ A+ L +M + G PN L+ A +A A
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEA------ 389
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
W L + G K TY
Sbjct: 390 WKLLNDMLQAG-----------------------------------------VKLNIVTY 408
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C ++A + M G+SPN +T L+ + +E A++ILK M E
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ PD++ Y + I ++L++ + EEMK I N V T++ A + G +
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG---K 525
Query: 637 VQQCLAVYQDMWKAG 651
L +Q+M G
Sbjct: 526 SSDALNFFQEMQDVG 540
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 164/419 (39%), Gaps = 55/419 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K+ + A++ ++ PN + ++ID G+ ++ + D
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V LNI + +L++ A + EV+++M K G+ + Y L+ A
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +I ++ +K D+ Y +I+ + + + E+M S G++ N +
Sbjct: 456 MEDAMKILKQMTECN----IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 511
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++I+A AG A++ F+EM G E +L+ EA + A F
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYF--- 568
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++LG +P Y
Sbjct: 569 ---CRMLSLG-----------------------------------------LQPNVAVYT 584
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + K L +EM+ G++P+ ++T LID GN++ AL ++ M E
Sbjct: 585 SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 644
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ D+ YT+ + + L QA F EM I P V I LLR + G L E
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ I E+++S+ ++ N + ++++ A L ++ MQ +GV A + +Y +L+
Sbjct: 493 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 552
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG LA + + + L L+ +V Y++++ + A K+ ++M
Sbjct: 553 DGLCEAGIVELAVDYFCRMLSLG----LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608
Query: 392 AGVTPNTI-----------------------------------TWSSLINACANAGLVEQ 416
G+TP+ ++SL++ + G + Q
Sbjct: 609 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 668
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
A F EM++ G P C LL+ + Q D A L
Sbjct: 669 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 369 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 483
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 526
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 137/358 (38%), Gaps = 84/358 (23%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L + + M + G + D Y ++ A C G A + E+ + DV T+
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA----DVNTFD 249
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW-------------------------- 401
+V+ + A ++ + M++ G P +T+
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309
Query: 402 -----SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+++I C G + +A L+E M GC+P++ +IL+ + + A RL
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R ME K F P
Sbjct: 370 R-----------------------EMEKK------------------------GFAPNVV 382
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY I++ + C + + +AL+ EM GL+ N + +I A G ++ A+ +++ M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
R G +PD+ +Y T I ++++++A +FE + + N +TY T++ A R G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 500
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 480
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 481 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 571
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 142/338 (42%), Gaps = 64/338 (18%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ + ++ + + L+ + N + + D + LE M G+ + YN ++
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWD----DTRALLE---EMSAKGLTLNSQGYNGMIY 424
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C G E G ++ + ++G D+ +Y+TI+ + + + A + E++L
Sbjct: 425 ALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N IT++++I+A G + A+ L +EM+ GC + N L++A +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK------- 533
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
DGN DR + +E ++ I
Sbjct: 534 --------------------DGNVDRSLVLLEEMAEKGI--------------------- 552
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP +YNIL+ C + RV+ L +M GL+P+ +++ LI+ G + AL
Sbjct: 553 KPNNVSYNILISELCKE-RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+L+ + + + PD++ Y I + + L A L
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 128/340 (37%), Gaps = 28/340 (8%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV SYN++L A A +Y + H + + FT+ +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVH---RDRVPPTTFTFGVAARALCR 187
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL + M G P+ + + ++I+A + G V +A L EML GC +
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNT 493
+ +++ + A RL ++K + Y + + D + +
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDR-MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
P +N ++ C + +A L M G P+ ++
Sbjct: 307 PEL-----------------NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTY 349
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+IL+ G + A+++L+ M + G +P+VV YT + ++ +L EEM
Sbjct: 350 SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ N Y ++ A + G + E + + Q+M G
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEA---MGLIQEMRSQG 446
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ + +++RSQ +I +N+++ N ++ +++N+ + GV+A+ +Y
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ A G Q+ K + G LDV +Y+ ++K +L + E
Sbjct: 490 NTIIHALLRDGRW---QDAVRLAKEMILHGC-SLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN ++++ LI+ V A+ L ++ML G P+ N L+ +
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 448 QFDRAFRLF 456
A L
Sbjct: 606 WMHAALNLL 614
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL 318
TII G + + + +++ +L++ +N L+ D + +L + + M +
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ + SYNIL+ C A E+ K + +G L D+ TY+T++ W
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELS---KQMLNQG-LAPDIVTYNTLINGLCKMGW 606
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
AL + E + + V P+ IT++ LI+ L++ A L + A C
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 168/413 (40%), Gaps = 78/413 (18%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y ++ + V LN +S +A + V + M G + D ++Y+ +L C
Sbjct: 436 YSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCN 495
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A LA ++ E+K +G L DV+TY+ +V F A + A K +M G TP
Sbjct: 496 ASKMELAFLLFEEMK----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T+++LI+A A V A LFE ML GC PN + L+ +A Q ++A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIF 611
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + P+ + ++ +D S +P
Sbjct: 612 ERMCGSK----------------------------DVPDV--DMYFKQYDDDNSERPNVV 641
Query: 517 TYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C +RV + L++ M G PN I + LID G ++ A ++
Sbjct: 642 IYGALLDGFCK-LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAE 700
Query: 574 MREDGM-----------------------------------SPDVVAYTTAIKVCVRSKR 598
M E G +P+VV YT I + +
Sbjct: 701 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 760
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A+ L + M+ QPN+VTY ++ +G + +++ CL + + M G
Sbjct: 761 TDEAYKLMQMMEEKGCQPNVVTYTAMIDG---FGRIGKIETCLELLERMGSKG 810
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 171/389 (43%), Gaps = 54/389 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++ NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP------------NSQC 435
MLS G PN +T+S+LI+ AG +E+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637
Query: 436 CNI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDK 487
N+ LL + + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQE 696
Query: 488 QSITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 527 ----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 757 KVGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPN 814
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
V Y I C ++ L A +L EEMK
Sbjct: 815 YVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 148/379 (39%), Gaps = 69/379 (18%)
Query: 293 VFNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNIL----LKACCLAGNTVL 342
VF +NV + LE ++ ++YN L LKA CL +++
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLV 257
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+E+ + L++D FT W+ AL + E + P+T+ ++
Sbjct: 258 HREM--------SLANLRMDGFTLRCYAYSLCKVGKWREALTLME---TENFVPDTVFYT 306
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
LI+ A L E+AM M C PN + LL C L+
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC-----------------LN 349
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTP---NFVPNSHYSSFDKRFSFK------- 512
K Q+ G R+ NM + +P N + +++ +S D +++K
Sbjct: 350 KKQL-------GRCKRVLNMMMM--EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 513 ----PTTTTYNILMKACCTDYYRVKALM--------NEMRTVGLSPNHISWTILIDACGG 560
P YNIL+ + C D + + +EM G+ N I+ +
Sbjct: 401 CGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCS 460
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G E A +++ M G PD Y+ + + +++ AF LFEEMK + ++ T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 621 YITLLRARSRYGSLHEVQQ 639
Y ++ + + G + + ++
Sbjct: 521 YTIMVDSFCKAGLIEQARK 539
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + F K + A + DA PN + +ID G+C G +++ +
Sbjct: 641 VIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALID--GLCKVGKLDEAQEVK 698
Query: 280 EDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +Y ++SL++ V DL +V M + ++ Y ++ C
Sbjct: 699 AEMSEHGFPATLYTYSSLIDRYFKVKRQDL--ASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G T E Y ++ +E KG + +V TY+ ++ F + L++ E M S GV
Sbjct: 757 KVGKT---DEAYKLMQMMEEKGC-QPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVA 812
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 813 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 724 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 779
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 780 VVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 839
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 840 EMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRL 899
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A V++A LF EM + G P Q
Sbjct: 900 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 33/355 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ + K+G + +Y ++K C G+T A ++ +K +E KG K DV Y+T
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL---LKKMEEKGC-KPDVVAYNT 216
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+ +M+ G+ PN +T+SS+++ N G + +A LF++M+
Sbjct: 217 VIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN 276
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNT 476
PN+ IL+ + A R+F T + T AL + Y D
Sbjct: 277 VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSS-------------FDKRFSFKPTTTTYNILMK 523
M K N + N H S +D+ + P T TY+ LM+
Sbjct: 337 KLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLT--PDTVTYSTLMQ 394
Query: 524 ACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + L EM + GL P+ I+++IL+D G+++ A ++LK M+E + P
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ Y I+ +L+ A LF + IQP++VTY ++ + G +E
Sbjct: 455 HICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNE 509
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ ++P++IT + N V A+ F ++L P N LL + V+ +
Sbjct: 27 TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF- 509
L + LS + + T I+ + H ++ + + +S+ K F
Sbjct: 87 TVISLCKQMDLSNIR----PNVYTLTILINCLCHSNRDHV--------HFAFSALGKMFK 134
Query: 510 -SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+PT T+ L+ C+ + A L +E+ +G +P+ I++T +I G+
Sbjct: 135 LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN 194
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
ALQ+LK M E G PDVVAY T I + +R +A F EM I PN+VTY ++L
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254
Query: 627 ARSRYGSLHE 636
G L+E
Sbjct: 255 GFCNLGQLNE 264
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 174/450 (38%), Gaps = 96/450 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY-- 279
I + ++ K +AL+ ++ P++ T+ID +C D + A+Y
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID--SLCKDRRANEAMYFF 234
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ Q + N+ ++S+++ N L ++K M VM + ++ IL+ C
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---- 393
G + A+ ++ + + GV + D +TYS ++ + A K+ + M+ G
Sbjct: 295 GMILEARRVF---EMMTENGV-EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350
Query: 394 -------------------------------VTPNTITWSSLINACANAGLVEQAMHLFE 422
+TP+T+T+S+L+ AG + A LF+
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EM G P+S +ILL + D AFRL ++ SK +
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE----------------- 453
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEM 539
P YNIL++ C ++ +++A L + +
Sbjct: 454 ------------------------------PHICIYNILIQGMC-NFGKLEAARELFSNL 482
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ +++T++I G A ++ + M +G P+ Y AI+ +R+
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
A L EEM + T+ LL S
Sbjct: 543 SNAVRLIEEMVGRGFSADSSTFQMLLDLES 572
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 145/390 (37%), Gaps = 59/390 (15%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNI------YVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
G C +Y ++ + + S N L I VFN L+ V + + K M
Sbjct: 39 GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ ++ + IL+ C + N + + + G+ V T+ T++
Sbjct: 99 NIRPNVYTLTILINCLCHS-NRDHVHFAFSALGKMFKLGLQPTHV-TFGTLLNGLCSKAK 156
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+K+ +++ G P+ IT++++I G A+ L ++M + GC+P+ N
Sbjct: 157 IIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNT 216
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ + + + + A F Q I
Sbjct: 217 VIDSLCKDRRANEAMYFFSEMV--------------------------DQGI-------- 242
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
P TY+ ++ C +L +M + PN +++TIL+D
Sbjct: 243 -------------PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD 289
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + A ++ ++M E+G+ PD Y+ + ++ +A LF+ M P
Sbjct: 290 GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP 349
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ Y L+ + L+E + L+ D
Sbjct: 350 SVRVYNILINGHCKSRRLNEAKTLLSEMYD 379
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 109/293 (37%), Gaps = 54/293 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC--ANAGLVEQAMHL 420
V ++ ++ K + + + + M + + PN T + LIN +N V A
Sbjct: 69 VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSA 128
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+M + G +P LL + A +LF D I
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLF--------------------DEIG 168
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
M F P+ TY ++K C + AL + +
Sbjct: 169 KM---------------------------GFAPSLITYTTIIKGLCKIGHTTNALQLLKK 201
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ +++ +ID+ A+ M + G+ P+VV Y++ + +
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +A SLF++M + PN VT+ L+ + G + E ++ V++ M + G
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR---VFEMMTENG 311
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + ++ +++T + +++LM A + +++K M G++ D +Y+ILL
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G+ E + +K ++ + + + Y+ +++ + + A ++ ++
Sbjct: 429 DGLCKHGH---LDEAFRLLKAMQESKI-EPHICIYNILIQGMCNFGKLEAARELFSNLFV 484
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ +T++ +I+ GL +A +F +M+ GC PNS N+ +Q +
Sbjct: 485 KGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSN 544
Query: 452 AFRLF-----RSWTLSKTQVALGEDYDGNTDRIS 480
A RL R ++ + + D + N + IS
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLLDLESNDEIIS 578
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 34/377 (9%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASY 327
++ +++ I+ ++ Q V ++ F+SL+ V N H L L +++M+K G++ D Y
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH-LDQALVYFRDMKKFGLVPDNVIY 296
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L+ C GN + A +I E+ LE VL DV Y+TI+ K A K+ +
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEM--LEQGCVL--DVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M+ G P+ T+++LI+ G + +A+ LF M Q +P+ N L+ +
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ ++A L +DG R H + N + H S +
Sbjct: 413 EMEKASEL----------------WDGMISRKIFPNHITYGILINA--YCSVGHVSEAFR 454
Query: 508 RF------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KPT T N ++K C D + + M G++P+HIS+ LI+
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV 514
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
N++ A + M ++G+ PD++ Y + R R+++A + +M I P+
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574
Query: 620 TYITLLRARSRYGSLHE 636
TY L+ +L+E
Sbjct: 575 TYTALINGHVTQDNLNE 591
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 195/445 (43%), Gaps = 43/445 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICG-DYMK-SR 276
+++F +R + + R L A+ SK +L S N C +++ G+ D+++ +
Sbjct: 48 NLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINA--CNSLLG--GLVKIDWVELAW 103
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
++ ++ + LN+Y N ++N D KF M+ G+ ADM +YN L+ A
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G L +E + + + KG LK +FTY+ I+ + A + +ML+ G+
Sbjct: 164 CREG---LLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA-- 452
+P+T T+++L+ +A +F EML+ G P+ + L+ D+A
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279
Query: 453 -FRLFRSWTLSKTQV---ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
FR + + L V L Y N + + ++ +D+ D
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML----------EQGCVLD-- 327
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
YN ++ C + A L +EM G P+ ++T LI GN+
Sbjct: 328 ------VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 381
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL + M + + PD+VAY T I + +++A L++ M +I PN +TY L+
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
A Y S+ V + ++ M + G
Sbjct: 442 A---YCSVGHVSEAFRLWDVMIEKG 463
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 59/402 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + + F + R L AL + KK P+ I ++ G C G+ +++ I ++
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH--GYCRNGNMLEALKIRDE 318
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q L++ +N+++N + T +++ M + G + D ++ L+ C GN
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++G + +K D+ Y+T++ F + A ++ + M+S + PN I
Sbjct: 379 MTKALSLFGTMTQRN----IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 434
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ LINA + G V +A L++ M++ G +P CN +++ C RS
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG---YC---------RSG 482
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK LG M K P +YN
Sbjct: 483 DSSKADEFLGR-----------MIAK------------------------GVAPDHISYN 507
Query: 520 ILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + KA + N+M GL P+ I++ ++++ G ++ A +L+ M E
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G++PD YT I V L +AF +EM P+ V
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 168/389 (43%), Gaps = 68/389 (17%)
Query: 265 VCGICGD-----------YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDL 305
+CG CG Y+++R + E LRS+ ++I NSL+ V +
Sbjct: 40 MCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWV 99
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ EV++ + + G+ ++ + NI++ A C G ++ + +E G+ D+ T
Sbjct: 100 ELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK---FDDVKSFLSEMEGNGIYA-DMVT 155
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ + + A ++ M G+ P+ T++++IN G +A + EML
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P++ N LL VE+C+ D S+ + GE
Sbjct: 216 NIGLSPDTTTYNTLL---VESCRRD---------NFSEAKEIFGEML------------- 250
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+Q + P+ V +SS FS + Y+R +M+ GL
Sbjct: 251 -RQGVV--PDLVS---FSSLIAVFSRNRHLDQALV--------YFR------DMKKFGLV 290
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+++ +T+L+ +GN+ AL+I M E G DV+AY T + + K L A L
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSL 634
F+EM P+ T+ TL+ + G++
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNM 379
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 32/347 (9%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN+ +FN+++ + L E+Y+ M G D +Y+IL+ C G A +
Sbjct: 293 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 352
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E KG +V TY+ ++ F W + E+M + G+T N+ ++ +I
Sbjct: 353 ---LREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 408
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
A G +++AM L +EM GC P+ N ++ Q + A +F + L + V
Sbjct: 409 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN-LLEEGVV 467
Query: 467 ALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
A G Y+ R + K+ I H S D +YN
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMIL---------HGCSLD--------VVSYNG 510
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+KA C D R L+ EM G+ PN++S+ ILI V AL++ K M G
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++PD+V Y T I + + A +L E++ + + P+++TY L+
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 133/322 (41%), Gaps = 61/322 (18%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +G AD+ +++ +++ C G A + V + KG + V TY +++
Sbjct: 220 MLLMGCAADVNTFDDVVRGMCGLGRVREAARL---VDRMMTKGCMP-GVMTYGFLLQGLC 275
Query: 375 DAKWWQMALKVKEDMLSAGVTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + E G P N + ++++I C G + +A L+E M GC+P+
Sbjct: 276 RVR------QADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPD 329
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ +IL+ + + A RL R ME K
Sbjct: 330 AHTYSILMHGLCKLGRIGSAVRLLR-----------------------EMEKK------- 359
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
F P TY I++ + C + + +AL+ EM GL+ N
Sbjct: 360 -----------------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 402
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +I A G ++ A+ +++ MR G +PD+ +Y T I ++++++A +FE +
Sbjct: 403 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 462
Query: 611 HYQIQPNLVTYITLLRARSRYG 632
+ N +TY T++ A R G
Sbjct: 463 EEGVVANGITYNTIIHALLRDG 484
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +K +PN+ ++ G + +RA+ E++ ++ +TLN +N ++
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + + + M+ G D+ SYN ++ C N +E ++L +
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC---NNEQMEEAEHMFENLLEE 464
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+TI+ WQ A+++ ++M+ G + + ++++ LI A G V++
Sbjct: 465 GVVA-NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 523
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++ L EEM + G +PN+ NIL+ E C+ R
Sbjct: 524 SLVLLEEMAEKGIKPNNVSYNILIS---ELCKERR 555
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 142/338 (42%), Gaps = 64/338 (18%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ + ++ + + L+ + N + + D + LE M G+ + YN ++
Sbjct: 356 MEKKGFAPNVVTYTIVLHSFCKNGMWD----DTRALLE---EMSAKGLTLNSQGYNGMIY 408
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C G E G ++ + ++G D+ +Y+TI+ + + + A + E++L
Sbjct: 409 ALCKDGRM---DEAMGLIQEMRSQGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV N IT++++I+A G + A+ L +EM+ GC + N L++A +
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK------- 517
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
DGN DR + +E ++ I
Sbjct: 518 --------------------DGNVDRSLVLLEEMAEKGI--------------------- 536
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP +YNIL+ C + RV+ L +M GL+P+ +++ LI+ G + AL
Sbjct: 537 KPNNVSYNILISELCKE-RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+L+ + + + PD++ Y I + + L A L
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ + +++RSQ +I +N+++ N ++ +++N+ + GV+A+ +Y
Sbjct: 414 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 473
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ A G Q+ K + G LDV +Y+ ++K +L + E
Sbjct: 474 NTIIHALLRDGRW---QDAVRLAKEMILHGC-SLDVVSYNGLIKAMCKDGNVDRSLVLLE 529
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN ++++ LI+ V A+ L ++ML G P+ N L+ +
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589
Query: 448 QFDRAFRLF 456
A L
Sbjct: 590 WMHAALNLL 598
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 115/328 (35%), Gaps = 60/328 (18%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
++ + +A C G A E ++ + G + D Y T++ D A +
Sbjct: 161 TFGVAARALCRLGR---ADEALALLRGMARHGCVP-DAVLYQTVIHALCDQGGVTEAATL 216
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ML G + T+ ++ G V +A L + M+ GC P LLQ
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q D + + LG R+ +
Sbjct: 277 VRQAD------------EARAMLG--------RVPEL----------------------- 293
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+N ++ C + +A L M G P+ +++IL+ G
Sbjct: 294 --------NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 345
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A+++L+ M + G +P+VV YT + ++ +L EEM + N Y
Sbjct: 346 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 405
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A + G + E + + Q+M G
Sbjct: 406 MIYALCKDGRMDEA---MGLIQEMRSQG 430
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 26/254 (10%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P T T+ A G ++A+ L M + GC P++ ++ A + A
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 454 RLFRSWTLSKTQVALGEDYDGNT--DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
TL + +G D NT D + M + + V D+ +
Sbjct: 215 ------TLLNEMLLMGCAADVNTFDDVVRGMCGLGR--VREAARLV--------DRMMTK 258
Query: 512 K--PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGA 567
P TY L++ C RV+ +G P N + + +I C G + A
Sbjct: 259 GCMPGVMTYGFLLQGLC----RVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEA 314
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ + M G PD Y+ + + R+ A L EM+ PN+VTY +L +
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Query: 628 RSRYGSLHEVQQCL 641
+ G + + L
Sbjct: 375 FCKNGMWDDTRALL 388
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL 318
TII G + + + +++ +L++ +N L+ D + +L + + M +
Sbjct: 475 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ + SYNIL+ C A E+ K + +G L D+ TY+T++ W
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELS---KQMLNQG-LAPDIVTYNTLINGLCKMGW 590
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
AL + E + + V P+ IT++ LI+ L++ A L + A C
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ SYN ++ C+ G + L A ++ D +TY+T+++ A
Sbjct: 119 DVMSYNAMVAGYCVTGQ-------LDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNA 171
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L V +DML G P+ +T++ L+ A +QA+ L +EM GC P+ N+++
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALG----EDYDGNTDRISNMEHKDKQSI 490
+ + D A +S T+S V G E ++ ++ M K +
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP-- 289
Query: 491 TNTPNFVPNSHYSSF--------------DK--RFSFKPTTTTYNILMKACCTDYY--RV 532
PN V + SF D+ ++ P + +YN ++ A C R
Sbjct: 290 ---PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 346
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A + M + G P+ +S+ L+ A G V+ A+++L +++ G +P +++Y T I
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 406
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + ++A L EM +QP+++TY T+ R G + E + QDM
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 154/385 (40%), Gaps = 75/385 (19%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNI 329
Y ++ + +++R + +I +N ++N + + +E K++ G + SYNI
Sbjct: 203 YKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNI 262
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+LK C A+ W+ A K+ +M
Sbjct: 263 VLKGLC---------------------------------------TAERWEDAEKLMAEM 283
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G PN +T++ LI+ GLVE AM + +++ + GC PNS N +L A + +
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM 343
Query: 450 DRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
DRA S+ T + G + D + + + KDK TP +
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL--KDKGC---TPVLI 398
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
S++ T + L KA T+ L+NEM T GL P+ I+++ +
Sbjct: 399 ------SYN---------TVIDGLTKAGKTE--EALELLNEMVTKGLQPDIITYSTISSG 441
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A++ +++ G+ P+ V Y + + + A LF M PN
Sbjct: 442 LCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPN 501
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + E ++ +A
Sbjct: 502 ESTYTILIEGLAYEGLVKEAREMMA 526
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 226 NFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDL 282
N + F +R LV A+ D K+ +PN I+ C RA+ E +
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILH--AFCKQKKMDRAMAFVELM 353
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S +I +N+L+ ++ +E+ ++ G + SYN ++ AG T
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A E+ E + KG L+ D+ TYSTI + A+K + G+ PNT+
Sbjct: 414 EEALELLNE---MVTKG-LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++++ A+ LF M+ GC PN IL++
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ L+ + T + +N++++ A + LE+ M G+ D+ +Y+ + C
Sbjct: 384 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLC 443
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + + +V+ + ++ + Y+ I+ + A+ + M+S G
Sbjct: 444 REGRIEEAIKAFCKVQDMG----IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN T++ LI A GLV++A + E+ G
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 226/511 (44%), Gaps = 35/511 (6%)
Query: 128 RIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLP 187
++D + + ++L G+ P D + +K C++ G + + + +EE +
Sbjct: 199 KVDMAIAIYRQLKAFGLNP---NDYTYTIAIKGFCRK----GNLAEAIDVFRDMEESGVT 251
Query: 188 VKELDEEFRIVQLCVN-KPDVNLAIRYACI---VPRADILFCNFVREFGKKRDLVSALRA 243
I LC++ + D+ + I +P + +R F + L A
Sbjct: 252 PNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESI 311
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
+K +P++Y+ +I + G+ +K+ A+++++ S+ V N + +S++
Sbjct: 312 LREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQ-GLS 370
Query: 304 DLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ EV +K +K+G+ D A YN+++ A C G A E+ E+K K ++
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMK---GKKMVP 427
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ Y+T++ + AL + +M G P+ +T++ L + GL ++A+ L
Sbjct: 428 -DIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M G +P++ N++++ + D A F + + E+Y +
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-----EEKCLENYSAMVNGYC 541
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEM 539
H +K + S K+ SF + +L C D + L+ M
Sbjct: 542 EANHVNKAFAL----LIRLSKQGRILKKASF------FKLLGNLCSEGDSEKALCLLETM 591
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ ++P I ++ +I A +G +E A + ++ + G++PDV+ YT I R ++
Sbjct: 592 VALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKM 651
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
K+A+ + +MK+ I+P+++TY LL S+
Sbjct: 652 KEAWHVLGDMKNRGIEPDVITYTVLLNNCSK 682
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 156/383 (40%), Gaps = 63/383 (16%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
AIY L++ + N Y + + +L ++V+++M++ GV + SY ++
Sbjct: 205 AIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGL 264
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
CL G + L ++ +V + AK + +DVF Y+ +++ F + A + +M G
Sbjct: 265 CLHGRSDLGFKVLQDV--INAK--IPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGF 320
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + +LI+ G + +A+ L +EM+ G + N + +LQ
Sbjct: 321 APDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQG------------ 368
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LS+ G ++N + F K+
Sbjct: 369 ------LSQM---------GMASEVAN-------------------QFKEF-KKMGIFFD 393
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
YN++M A C L+ EM+ + P+ I++T +I G V AL I +
Sbjct: 394 EACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYR 453
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ G PD+V Y R+ ++A SL M+ ++P+ VT+ ++ G
Sbjct: 454 EMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGG 513
Query: 633 SLHEVQ--------QCLAVYQDM 647
+ + Q +CL Y M
Sbjct: 514 KVDDAQAFFDNLEEKCLENYSAM 536
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 162/413 (39%), Gaps = 99/413 (23%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ T+I + G + + IY +++ +I +N L + + + L +
Sbjct: 427 PDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSL 486
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI------------------YGEVKHL 353
M+ GV D ++N++++ C+ G AQ Y E H+
Sbjct: 487 LNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHV 546
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQM------------ALKVKEDMLSAGVTPNTITW 401
L + + I+K A ++++ AL + E M++ + P I +
Sbjct: 547 NKAFALLIRLSKQGRILK---KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMY 603
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S +I A AG +E+A ++F ++ G P+ I++ + R ++ +W +
Sbjct: 604 SKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING------YCRMNKMKEAWHV 657
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ +M+++ +P TY +L
Sbjct: 658 -----------------LGDMKNR------------------------GIEPDVITYTVL 676
Query: 522 MKACCT----------DYYRVK-------ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ C D + K AL +EM+ + + P+ I +T+LID + N+
Sbjct: 677 LNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNI 736
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ A+ + M + G++PD V YT + +K+A LF+EM + I+P+
Sbjct: 737 QDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPD 789
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 93/251 (37%), Gaps = 52/251 (20%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+LI C +G+ +QA + + G P CN L+ VE+ + D A ++R
Sbjct: 154 ALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQL--- 210
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K F P TY I +
Sbjct: 211 --------------------------------------------KAFGLNPNDYTYTIAI 226
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
K C +A+ +M G++PN S+T I+ G + ++L+ + +
Sbjct: 227 KGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIP 286
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DV AYT I+ +LK+A S+ EM+ P++ Y L+ G+L +
Sbjct: 287 MDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL---LKA 343
Query: 641 LAVYQDMWKAG 651
LA++ +M G
Sbjct: 344 LALHDEMVSKG 354
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 135/344 (39%), Gaps = 53/344 (15%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C +G A ++ + KH + + + ++ +++ MA+ + +
Sbjct: 155 LIKVCVASGMFDQAFDVLLQTKHCG----FAPQILSCNFLMNRLVESRKVDMAIAIYRQL 210
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN T++ I G + +A+ +F +M ++G PNS ++ +
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D F++ + +K + + S M+ K+ +SI ++
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM------------EKQ 318
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI------------------ 549
F P Y L+ C + + AL +EM + G+ N +
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378
Query: 550 -----------------SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +++DA G VE A+++L M+ M PD++ YTT I
Sbjct: 379 ANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISG 438
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ A +++ EMK +P++VTY L SR G E
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQE 482
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P M + +I G+ K++ ++ L + + ++ + ++N + +K
Sbjct: 597 NPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWH 656
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEVKHLEA 355
V +M+ G+ D+ +Y +LL C N + ++ E+K ++
Sbjct: 657 VLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMD- 715
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+K DV Y+ ++ Q A+ + +M+ G+ P+T+T+++L++ N G ++
Sbjct: 716 ---IKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIK 772
Query: 416 QAMHLFEEMLQAGCEPNSQCCNIL 439
+A+ LF+EML G P++ ++L
Sbjct: 773 KAVVLFDEMLNKGIRPDAHTMSVL 796
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 55/367 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + A ++ E ++ KG+ + DV
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE---MDNKGI-RPDV 293
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-LVE------- 415
FTYS+++ + W A ++ DM+ + PN +T+S+LI+A G LVE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 416 ---------------------------QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+A H+FE M+ C PN + L++ +A +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDK 507
+ LFR +S+ + GNT + + H Q+ + V S
Sbjct: 414 VEEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---- 461
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYNIL+ C + KA++ ++ + P+ ++ I+I+ +G VE
Sbjct: 462 -VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ + G+SP+V+AY T I R ++A SL ++MK PN TY TL+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 626 RARSRYG 632
RAR R G
Sbjct: 581 RARLRDG 587
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 179/393 (45%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I FN L++ A KF L + + MQ LG+
Sbjct: 66 DAVDLFGDMVKSRPFP----------SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +Y+I + C LA + ++ L + D+ T S+++ + +K
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLSSLLNGYCHSKRISD 171
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T T+++LI+ +A+ L ++M+Q GC+P+ ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + +H D + N
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLCKYKHMD-----DALNL----- 280
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TY+ L+ +C +Y R L+++M ++PN ++++ LIDA
Sbjct: 281 FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL++ + V++ + ++++M + G
Sbjct: 399 VTYSTLIKG---FCKAKRVEEGMELFREMSQRG 428
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 68/402 (16%)
Query: 220 ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
AD++ N + K + + AL + P+++ ++I G + + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
D+ + + N+ F++L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ E KH+ + K +V TYST++K F AK + +++ +M G
Sbjct: 376 -------HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ NT+T+++LI+ A + A +F++M+ G PN NILL + + +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+F + +R + +P
Sbjct: 489 VVFE-----------------------------------------------YLQRSTMEP 501
Query: 514 TTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYNI+++ C D + L + G+SPN I++ +I G+ E A
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWE---LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+LK M+EDG P+ Y T I+ +R + + L +EM+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 32/331 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G D+ +Y ++ C G+ LA + +K +E KG ++ DV Y+TI+
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL---LKKME-KGKIEADVVIYNTIIDGLC 269
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
K AL + +M + G+ P+ T+SSLI+ N G A L +M++ PN
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ A V+ + A +L YD R + + S+ N
Sbjct: 330 TFSALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 371
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TY+ L+K C RV+ L EM GL
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-AKRVEEGMELFREMSQRGLV 430
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M G+ P+++ Y + ++ +L +A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
FE ++ ++P++ TY ++ + G + +
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 61/337 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 381
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +Y+ L+K C A E++ E+ G + TY+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYT 437
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T++ L++ G + +AM +FE + ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF + +L
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS---------------------- 535
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
P YN ++ C + +A L+ +M+ G
Sbjct: 536 -------------------------PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
PN ++ LI A G+ E + +++K MR G + D
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 144/351 (41%), Gaps = 62/351 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD------ 362
L V+ N+Q +G + S+ L + C + A Y E+ ++K+D
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71
Query: 363 -----------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ ++ A +++ + + E M + G++ + T+S IN
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+ + +M++ G EP+ + LL + + A L
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL---------------- 175
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D++ M +K P++ F+F TT + + + ++
Sbjct: 176 ----VDQMVEMGYK------------PDT--------FTF--TTLIHGLFLHNKASE--- 206
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL+++M G P+ +++ +++ G+++ AL +LK M + + DVV Y T I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ K + A +LF EM + I+P++ TY +L+ YG + + L+
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 185/434 (42%), Gaps = 62/434 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
K L A + KK + PN + +I+ G C + RA + ++++ + N
Sbjct: 19 KANRLPEATTYFAKMKKKGTVPNEWTYNVLIN--GFCKVHKVHRAYLLLKEMKESGLAPN 76
Query: 291 IYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++++++ K ++++ M + G M ++ +YN LL C G L E Y
Sbjct: 77 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG---LMDEAYE 133
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L+ D F+Y T++ MALKV ED + P+ + +S+LI
Sbjct: 134 LLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G +++A LFE+M + CEP+ L+ C+ DR L + Q L
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG---LCKGDR---------LQEAQQVL 240
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-----------DKRFSFK----- 512
ME ++ TPN + YSS D + FK
Sbjct: 241 -----------ETMEDRN-----CTPNVI---TYSSLIDGLCKTGQVRDAQEVFKRMIVR 281
Query: 513 ---PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TYN L+ C AL M EM G P+ I++ LID +G A
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M+ +PDV+ Y+ I + +R+ A +LF++M + P++VT+ TL+
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 628 RSRYGSLHEVQQCL 641
G + + ++ L
Sbjct: 402 YCNAGLVDDAERLL 415
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 166/396 (41%), Gaps = 60/396 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ ++ID G+C G ++ +++ + + + N+ +NSL++ + +
Sbjct: 249 TPNVITYSSLID--GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M G + D+ +YN L+ C G A ++G++K AK DV TYS
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK---AK-FCNPDVITYSC 362
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + MA + +DML V P+ +T+S+L+ NAGLV+ A L EEM+ +
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + A R+ + Q
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ----------------------- 459
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TY L+ A C A L+ EM G+ P
Sbjct: 460 ------------------------PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 547 NHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N I++ LI G+G++E A ++L ++ R++ D+ AY + R+ R+ A L
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E +K P Y+ L+R + L + + L
Sbjct: 556 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 591
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 53/289 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V T++ ++ A A M G PN T++ LIN V +A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM ++G PN + ++ + D A++LFR
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR------------------------ 101
Query: 482 MEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
Q + N PN V TYN L+ C + +A L++
Sbjct: 102 ------QMVENGCMPNLV-------------------TYNTLLSGLCRNGLMDEAYELLD 136
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EMR GL P+ S+ L+ +G ++ AL++ + PDVVAY+T I ++
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
RL +A LFE+M+ +P++VT+ L+ + L E QQ L +D
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 42/237 (17%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++D+ Q V ++ F++L+ NA + + + M D+ +Y L+
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G V A+ + +K + +G + +V TY+ ++ F A +A K+ E+M+
Sbjct: 436 GFCKVGRMVEARRV---LKRMAKRGC-QPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 393 GVTPNTITWSSLINACANAGLVEQA----------------------------------- 417
GV PN IT+ SLI G +E+A
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 418 -MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+ L E + Q+G P L++ + + +A + TLS+ E Y+
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYE 608
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 14/209 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + V F K +V A R K PN+ +ID G + + E++
Sbjct: 430 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV 489
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLA 337
V N+ + SL+ DL+ E K +++L ADM +Y +++ C
Sbjct: 490 GNGVQPNVITYRSLIGGFCGTGDLE---EARKMLERLERDENCKADMFAYRVMMDGLCRT 546
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTP 396
G A E+ +K ++ + D+ Y +++ K A++V E+M LS P
Sbjct: 547 GRMSAALELLEAIK--QSGTPPRHDI--YVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML 425
N + ++I A G E+A L +E+L
Sbjct: 603 NAEAYEAVIQELAREGRHEEANALADELL 631
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 167/376 (44%), Gaps = 34/376 (9%)
Query: 279 YEDLRSQN-VTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKAC 334
+ D+ SQ+ + + ++ +++L+ ++ L T V Y M GV ++ YN ++ A
Sbjct: 337 FLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN A+ I +V E + D FTY++++ AL+V M G
Sbjct: 396 CKDGNVADAETIMKKVFESE----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+T+S+LIN ++G V +A L EM+ G P + C + A + ++ A+R
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511
Query: 455 LF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----TNTPNFVPNSHY 502
LF + T + G G + H+ + T T N + N
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571
Query: 503 SSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +++F TYN ++K C D + +MN M G S N +
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 631
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +I SGN AL+IL +MR+ G PD +YT I + +++ AF LF EM
Sbjct: 632 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691
Query: 610 KHYQIQPNLVTYITLL 625
+ PN VTY L+
Sbjct: 692 VDDGLCPNEVTYTALI 707
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 186/406 (45%), Gaps = 31/406 (7%)
Query: 254 PNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P + C II +C + G Y + ++ D++++ N+Y + +L++ + LK +
Sbjct: 488 PTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 546
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + GV + +YN L+ L N + V +L + L ++ TY+ ++
Sbjct: 547 LFHRMSRDGVFPNTVTYNALINI--LVENRRIKYAFV--VLNLMGRNGLFTNIVTYNEMI 602
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ V +ML G + N +T++++I ++G A+ + + M GC+
Sbjct: 603 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 662
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ + + + AF LF L +V DG KD+
Sbjct: 663 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC--------KDE 714
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ T T H KR +P TYN+L+ ++ + L M G+
Sbjct: 715 KLDTATSLL---EHM----KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID +G+ AL++ M E G P+++ Y++ I+ + ++++A +L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F E++ + + P+ +TY+ ++ A G +V+ M KAG
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIMSG---KVEHAFNFLGRMIKAG 870
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 126/559 (22%), Positives = 216/559 (38%), Gaps = 67/559 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + L KDG + + I++ V SE + F S I+ R+ +D +
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------YTSMILGHCRKHDLDSAL 440
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELD 192
V ++ + G P + + L N L DSG V E F + E++ LP
Sbjct: 441 QVFNQMAKEGCEP----NTVTYSTLING---LCDSGRVNEAFDLIREMILHGILPTA--- 490
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
+ C P I C + G D A R + K
Sbjct: 491 --------------------HTCTGP--IIALC----DMGCYED---AWRLFVDMKNKGC 521
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
PN+Y +I + G + ++ + V N +N+L+N V +K+
Sbjct: 522 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 581
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M + G+ ++ +YN ++K C+ G+ A + + ++ +G ++ TY+TI+
Sbjct: 582 VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRG-HSANLVTYNTII 637
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + D+ AL++ + M G P+ +++ LI +E A LF EM+ G
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN L+ + + D A L S + N + + H +
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP--------NVQTYNVLIH----GL 745
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
T NF P TY ++ C + AL N+M G PN
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LI A G G VE A + + G+ PD + Y I+ + S +++ AF+
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865
Query: 609 MKHYQIQPNLVTYITLLRA 627
M QP L TY L++
Sbjct: 866 MIKAGCQPTLWTYGVLIKG 884
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 175/430 (40%), Gaps = 26/430 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSR-AIY 279
+ + ++ + + SALR D + P+ + +I CG C M+S ++
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI--CGFCKISKMESAFGLF 688
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + N + +L++ D K + ++M++ G ++ +YN+L+
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A+E+ K + +G+ +V TY+ ++ +AL++ M+ G PN
Sbjct: 749 NNFSGAEEL---CKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSLI A G VE+A +LF E+ + G P+ +++A + + + + AF
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFD--------- 506
+ Q L Y + N Q + P+ VPN Y + D
Sbjct: 865 RMIKAGCQPTLWT-YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 923
Query: 507 KRFSFKP--TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K P + N L+ T ++ L+ M + GL P+ ++ L+ +
Sbjct: 924 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ A+ + K M G + Y I + R K+A FE M P+ V
Sbjct: 984 NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 1043
Query: 623 TLLRARSRYG 632
L+ R G
Sbjct: 1044 VLIDGLLRDG 1053
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
M A D Y + M + G+ PN + + +I+A GNV A I+K + E MSP
Sbjct: 365 MTAAVMDRY------HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP 418
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D YT+ I R L A +F +M +PN VTY TL+ G ++E
Sbjct: 419 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 473
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 21/297 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV TY+ ++ A W+ A + EDML A + P+ T+++LINAC + G +A+
Sbjct: 62 KPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALR 121
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ ++M G P+ NI+L A Q+ +A F ++ G + +T +
Sbjct: 122 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYF--------ELMKGTNIRPDTTTL 173
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYRVKA 534
+ + H K KQ F S +KR +P T+ I + + KA
Sbjct: 174 NIVIHCLIKVKQYGQAIEIFS-----SMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKA 228
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ + M G+ PN +S+ LI A G + A + M+ G PDVV+YT+ I
Sbjct: 229 VFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFG 288
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS++ +A +F+ MK + +PNLV+Y L+ A YGS + Q + + ++M + G
Sbjct: 289 RSQQPARAREVFDMMKRNKCKPNLVSYNALMDA---YGSNGYLPQAVDILREMEQDG 342
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 170/398 (42%), Gaps = 56/398 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG CG++ ++ + + + V ++ N +++ +++ L
Sbjct: 98 PSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSY 157
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ A EI+ ++ E + + DV T+++I+
Sbjct: 158 FELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMR--EKRSECRPDVVTFTSIIH 215
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + V ML+ G+ PN +++++LI+A A+ G+ ++A +F+EM ++G P
Sbjct: 216 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 275
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ + Q RA +F
Sbjct: 276 DVVSYTSLISTFGRSQQPARAREVF----------------------------------- 300
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
KR KP +YN LM A ++ Y +A ++ EM G+ PN +
Sbjct: 301 ------------DMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVV 348
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S L+ ACG G +L G+ + +A +AI + ++A +L+ M
Sbjct: 349 SICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSM 408
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ +P+ VT+ L+ R + + ++ L +++M
Sbjct: 409 ENKTTKPDSVTFTILISGCCR---MSKYEEALCFFKEM 443
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 169/404 (41%), Gaps = 59/404 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+++G+ ++ S++R K+ P++ +II + + G +A++ + ++ +
Sbjct: 183 VKQYGQAIEIFSSMR----EKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGI 238
Query: 288 TLNIYVFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +N+L++ A H + K V+ M++ G D+ SY L+ + A+E
Sbjct: 239 KPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARARE 298
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ +K + K ++ +Y+ ++ + + A+ + +M G+ PN ++ +L+
Sbjct: 299 VFDMMK----RNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLL 354
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
AC G + G N+ CN + + + ++++A L+RS
Sbjct: 355 AACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRS------- 407
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
ME+K + KP + T+ IL+ C
Sbjct: 408 ----------------MENK------------------------TTKPDSVTFTILISGC 427
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + Y EM + + + ++ +I A G + A + ++ G PD+
Sbjct: 428 CRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDL 487
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YT I S+ ++ +L++EM+ IQ + + L++A
Sbjct: 488 VTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKA 531
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 151/362 (41%), Gaps = 33/362 (9%)
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
V LR + H PN+ T++ CG G + ++ + + LN NS
Sbjct: 332 VDILREMEQDGIH---PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSA 388
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ +N + + + +Y++M+ D ++ IL+ CC A + E+ L
Sbjct: 389 IGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLR- 447
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ L YS+++ ++ A + + +G P+ +T++++INA + + + E
Sbjct: 448 ---IPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWE 504
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY-DG 474
+ L++EM + +S C+ L++A F++ + L++ G + D
Sbjct: 505 KVCALYQEMEANNIQLDSIACSALMKA------FNKGNQASNVLILAEIMKEKGIPFNDA 558
Query: 475 NTDRISNMEH--KDKQSITNTPNFV-PNSHYSSF---DKRFSFKPTTTTYNILMKACCTD 528
N + + +D + T+ N + P+ H S + F + I++K
Sbjct: 559 NFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKL---- 614
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+YR AL G S N +++IL+ +G +++L+ M + G+ P Y
Sbjct: 615 FYRFVAL-------GSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNN 667
Query: 589 AI 590
+
Sbjct: 668 IL 669
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 189/429 (44%), Gaps = 38/429 (8%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
N +R + +L + ++ P++ C ++I G C G K+ + E L
Sbjct: 62 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIR--GFCRIGKTKKATWVMEILE 119
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ +N L++ + ++ L+V + ++ V D+ +YN +L+ C +G
Sbjct: 120 QSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLK 176
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+ E DV TY+ +++ A+K+ ++M + G P+ +T+
Sbjct: 177 QAMEVLDRQLQKECYP----DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 232
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----- 456
+ LIN G +++A+ M GC+PN NI+L++ ++ A +L
Sbjct: 233 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 292
Query: 457 RSWTLSKTQVALGEDY---DGNTDR-ISNMEHKDKQSIT-NTPNFVPNSHYSSFDKRFSF 511
+ + S + ++ G R I +E T N+ ++ P H +K+
Sbjct: 293 KGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR 352
Query: 512 K-------------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN L+ A C D A ++N++ + G SP I++ +ID
Sbjct: 353 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 412
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G E A+++L MR G+ PD++ Y++ + R ++ +A F +++ I+P
Sbjct: 413 GLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 472
Query: 617 NLVTYITLL 625
N +TY +++
Sbjct: 473 NAITYNSIM 481
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 165/367 (44%), Gaps = 37/367 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + +++ G + D+ +YN+L+ C +G EI ++ L+ V DV TY+TI+
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSG------EIDNALQVLDRMNVAP-DVVTYNTIL 166
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D+ + A++V + L P+ IT++ LI A V QAM L +EM G +
Sbjct: 167 RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 226
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTD 477
P+ N+L+ + + D A + + + ++ + G D
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE-K 285
Query: 478 RISNMEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACC 526
+S+M K T N + N +K P + +YN L+ C
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T I + + ++A L +EM+ ++P+++TY +L+ SR G +V + + +
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG---KVDEAIKFF 462
Query: 645 QDMWKAG 651
D+ G
Sbjct: 463 HDLEGLG 469
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 20/331 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGR---LDEAIKFLNNMPSYGC-QPNVITHNI 269
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-DRISNMEHKDK 487
C PNS N LL + + DRA V+ G D T + + KD
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYL------DIMVSRGCYPDIVTYNTLLTALCKDG 383
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
+ + + N S P TYN ++ R L++EMR GL
Sbjct: 384 K--VDVAVEILNQLSSK-----GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I+++ L+ G V+ A++ + G+ P+ + Y + + +S++ +A
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
M + +P TY L+ + G E
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEGLAKE 527
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 225 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 284
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 285 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 399
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 400 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 503
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G MK + +++R++ ++ +N L+N L ++ NM G ++ ++
Sbjct: 211 GQAMK---LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 267
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+L++ C G + A+++ ++ KG V T++ ++ A+ + E
Sbjct: 268 NIILRSMCSTGRWMDAEKLLSDMLR---KGC-SPSVVTFNILINFLCRQGLLGRAIDILE 323
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G TPN+++++ L++ +++A+ + M+ GC P+ N LL A +
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383
Query: 448 QFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----ISNMEHKD-KQSITNTP 494
+ D A + + ++ V G G T+R + M K K I
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443
Query: 495 NFVPN-SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ V S D+ F +P TYN +M C +A+ + M +
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
P ++TILI+ G + AL +L + G+ A A+K+
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 432
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 433 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEG 518
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 217/504 (43%), Gaps = 46/504 (9%)
Query: 151 DGSGFKL-LKNEC---QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPD 206
D GF+ L++ C + L+ SG V L+ L + +LPV D + R +++ D
Sbjct: 171 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMAD 230
Query: 207 VNLAIRYACIVPRADIL---FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
+N V D+L +C R G R+ + R + A+K P + C ++
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFR-FLANKGVF--PTVKTCTFLL 286
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
+ KS ++E +R Q V+ ++Y+F++ +N ++ ++++ +M+KLGV
Sbjct: 287 SSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 345
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YN L+ C GN E + + + GV + TYS ++ + +
Sbjct: 346 PNVVTYNNLIHGLCKHGNL---DEAFRFKEKMVKDGV-NATLITYSVLINGLMKLEKFNE 401
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++ L G TPN + +++LI+ G + A+ + +M+ G PNS N ++Q
Sbjct: 402 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 461
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ Q ++A + L + N + + H NS
Sbjct: 462 GFCKIGQMEQAECILEE--------MLSRGFSINPGAFTTIIHW----------LCMNSR 503
Query: 502 YSSFDKRF-------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWT 552
+ S RF + +P L+ C + A+ R + G N ++
Sbjct: 504 FES-ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI +GN++ A+++LK M E G D + Y T I C + ++++ F L EM
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 613 QIQPNLVTYITLLRARSRYGSLHE 636
I+P+ TY L+ R G L E
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDE 646
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 190/432 (43%), Gaps = 34/432 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++++ + + K +L ALR +PN +II G C G ++ I
Sbjct: 418 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ--GFCKIGQMEQAECI 475
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
E++ S+ ++N F ++++ + +F L + M + + L+ C
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ + LE KG ++ T + ++ Q A+++ + ML G
Sbjct: 536 EGKHSDAVELW--FRLLE-KG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ IT+++LI+ C G VE+ L EM++ G EP++ N+L+ + D A L+
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651
Query: 457 ---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+S L G DG D+I E + +T +
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-----------------NL 694
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ + YN L++A C + V+A L ++MR+ G+ P +++ LI G +E A
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ MR++G+ P+VV YT I + ++ + ++ +EM Y I PN +TY ++ S
Sbjct: 755 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 814
Query: 630 RYGSLHEVQQCL 641
+ G + + L
Sbjct: 815 KSGDMKTAAKLL 826
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 30/364 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T++ G+C G + + ++ L + N+ N+L++ +++ +
Sbjct: 521 PNDGLLTTLVG--GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M + G + D +YN L+ CC G ++ GE+ K ++ D FTY+ +
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM----VKQGIEPDTFTYNLL 634
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + + S + PN T+ +I+ A +E+ LF E+L
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E NS N L++A AF+L RS + T G + I ME D
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN-IGRME--D 751
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + + ++ P Y L+ C +V ++ EM + +
Sbjct: 752 AKCLIDE------------MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T++ID SG+++ A ++L M G+ PD V Y + ++++
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859
Query: 605 LFEE 608
L E+
Sbjct: 860 LAED 863
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +M +G+SPN +++ LI GN++ A + + M +DG++ ++ Y+ I +
Sbjct: 335 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 394
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ +A S+ +E PN V Y TL+ + G+L + L + DM G
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA---LRIRGDMVSKG 448
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N G A+ +F + G P + C LL + V+A + ++++ W + +
Sbjct: 257 NVGF-RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY-----WVFETMRQGVS 310
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT- 527
D + I+ K V ++ FD ++ P TYN L+ C
Sbjct: 311 PDVYLFSTAINAFCKGGK---------VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKH 361
Query: 528 ----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ +R K +M G++ I++++LI+ A +LK E G +P+
Sbjct: 362 GNLDEAFRFK---EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE 418
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y T I + L A + +M I PN VT ++++ + G +++Q +
Sbjct: 419 VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG---QMEQAECI 475
Query: 644 YQDMWKAG 651
++M G
Sbjct: 476 LEEMLSRG 483
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 184/419 (43%), Gaps = 52/419 (12%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
DA+++ + S P+ Y +I V G + ++ +D+ + N+ + L+
Sbjct: 128 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ F + V M+ G ++ +YN+++ C G A+E+ + L + G
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL---LNRLPSYG- 243
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D +Y+T++K +K W ++ +M+ PN +T+ LI G+VE+A+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALG- 469
+ E+M + GC N+ CNI++ + + + D AF+L T+S T V G
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363
Query: 470 ---EDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSF----------------DKRF 509
E +D + ++ M N P PN +++F ++
Sbjct: 364 CRAERWDDAKELLNEMVRN------NCP---PNEVTFNTFICILCQKGLIEQAIMLIEQM 414
Query: 510 SFKPTT---TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
S T TYN L+ C + + + + R++ PN I++T L+ + ++G
Sbjct: 415 SEHGCTVGVVTYNALVNGFCVQGH-IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDG 473
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +++ M P+VV + + + L++A L E+M + PNL+TY TLL
Sbjct: 474 AAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLL 532
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M + G + NI++ + C
Sbjct: 270 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSIC 329
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + + + G D +Y+T++K A+ W A ++ +M+
Sbjct: 330 KQGRV---DDAFKLLNDMGSYGC-NPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCP 385
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA+ L E+M + GC N L+ CV+ D A
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQG-HIDSALE 444
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LFRS T++ T + G E DG + ++ M D
Sbjct: 445 LFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD------------------- 485
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C + +A L+ +M G +PN I++ L+D +
Sbjct: 486 -----CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCS 540
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + G+SPDV+ +++ I + + R+++A LF ++ ++P V Y
Sbjct: 541 SEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNK 600
Query: 624 LL 625
+L
Sbjct: 601 IL 602
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 508 RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R +P TY +L++A C + + + A+++EMR G +PN +++ ++I+ G V+
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L + G PD V+YTT +K SKR LF EM PN VT+ L+
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
R R G V++ + V + M + G
Sbjct: 291 RFFCRGGM---VERAIQVLEQMTEHG 313
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 95/340 (27%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L++ C G T A + ++ E G +DVF Y+T+V + A ++ M
Sbjct: 82 LIRNLCRRGRTSDAARV---LRAAEGSGS-PVDVFAYNTLVAGYCRYGHLDAARRLIGSM 137
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
V P+ T++ LI + G V A+ L ++ML+ GC+PN +LL+A F
Sbjct: 138 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGF 194
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
++A + + ++ TPN V
Sbjct: 195 EQAMAVL----------------------------DEMRAKGCTPNIV------------ 214
Query: 510 SFKPTTTTYNILMKACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDA--------- 557
TYN+++ C + RV + L+N + + G P+ +S+T L+
Sbjct: 215 -------TYNVIINGMCREG-RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDD 266
Query: 558 ---------------------------CGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
C G G VE A+Q+L+ M E G + + I
Sbjct: 267 VEELFAEMMEKNCMPNEVTFDMLIRFFCRG-GMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ R+ AF L +M Y P+ ++Y T+L+ R
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY L++ C D RV +L+++M G PN +++T+L++A + E A+
Sbjct: 141 PDAYTYTPLIRVLC-DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR--- 626
+L MR G +P++V Y I R R+ A L + Y QP+ V+Y TLL+
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259
Query: 627 ARSRYGSLHEV 637
A R+ + E+
Sbjct: 260 ASKRWDDVEEL 270
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 194/481 (40%), Gaps = 70/481 (14%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC-QRLLDSGEVEMFVGLMEVLEE 183
REGR+D +L +L G P + S LLK C + D E E+F E++E+
Sbjct: 225 REGRVDDARELLNRLPSYGFQPDTV---SYTTLLKGLCASKRWDDVE-ELFA---EMMEK 277
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCN 226
+P N+ ++ IR+ C +V RA + CN
Sbjct: 278 NCMP---------------NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322
Query: 227 FV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
V K+ + A + + + +P+ T++ G+C + ++ + ++
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK--GLCRAERWDDAKELLNEMV 380
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
N N FN+ + + ++ + + + M + G + +YN L+ C+ G+
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E++ + K + TY+T++ +A+ A ++ +ML PN +T+
Sbjct: 441 SALELFRSMP-------CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L++ G +E+A+ L E+M++ GC PN N LL + C + A L +
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGL-V 552
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
SK + D + I + +D+ + + V + +P YN
Sbjct: 553 SK---GVSPDVITFSSIIGILSKEDRIEEAVQLFHVV---------QDIGMRPKAVVYNK 600
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C A+ M + G PN ++ ILI+ G ++ A +L ++ G
Sbjct: 601 ILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Query: 579 M 579
+
Sbjct: 661 V 661
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y + A + ++ ++P+ ++T LI G V AL +L M
Sbjct: 114 YNTLVAGYCR-YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+VV YT ++ R+ +QA ++ +EM+ PN+VTY ++ R G + +
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 638 QQCL 641
++ L
Sbjct: 233 RELL 236
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 156/378 (41%), Gaps = 56/378 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M + GV ++ +YNIL++ C AGN + +GE +E G L +V TY+TI+
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGE---MERNGCLP-NVVTYNTII 245
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTI------------------------------- 399
+ + A K+ M G+ PN I
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 400 ----TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++LIN N G QA+ L EM++ G PN L+ + +A +RA
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME- 364
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F + G Y D S KQ+ V N F PT
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFL-KQAYQIMKEMVENG----------FTPTI 413
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C L+ EM G P+ +S++ +I + +E A Q+
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G+SPDV Y++ I+ + +RL + LF+EM + P+ VTY +L+ A G
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 634 LHEVQQCLAVYQDMWKAG 651
L + L ++ +M + G
Sbjct: 534 L---DKALRLHDEMIQKG 548
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 183/403 (45%), Gaps = 37/403 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SPN+Y +I G+ + ++ N+ +N++++ L+ E +
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC-KLRKIGEAF 258
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K ++ + G+ ++ SYN+++ C G EI E+ +K D T++T+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM----SKRRYVPDRVTFNTL 314
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + AL + +M+ G++PN +T+++LIN+ AG + +AM ++M G
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGN--TDRISNMEH 484
PN + L+ + +A+++ + + T + +G+ R+ +
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 485 KDKQSITNTPNFVPNS-HYSS----------FDKRFSFK---------PTTTTYNILMKA 524
++ I F+P+ YS+ +K F K P TY+ L++
Sbjct: 435 LLQEMIER--GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 525 CCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C V L EM ++GL P+ +++T LI+A G+++ AL++ M + G SPD
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+V Y I + R K+A L ++ + + PN +TY TL+
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 54/375 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K +L A+ D + PN T+ID G ++ I ++
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLA 337
+ T I +N+L +N H + +E + + M + G + D+ SY+ ++ C
Sbjct: 404 MVENGFTPTIITYNAL--INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC-- 459
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L + +V+ + AKG+ DV TYS++++ + + ++MLS G+ P+
Sbjct: 460 RNQELEKAFQLKVE-MVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SLINA G +++A+ L +EM+Q G P+ N+L+ + + A RL
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L + V Y+ D +N+E K +
Sbjct: 578 KL-LYEESVPNEITYNTLIDNCNNLEFKSALA---------------------------- 608
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LMK C +K LMNE M G N + ++I GN+E A +
Sbjct: 609 ---LMKGFC-----MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660
Query: 571 LKIMREDGMSPDVVA 585
K M G +P V
Sbjct: 661 YKEMLHSGFAPHSVT 675
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
K + F P +YN ++ A VK + EM G+SPN ++ ILI +GN
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E L M +G P+VV Y T I + +++ +AF L M + PNL++Y
Sbjct: 219 LEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 624 LLRARSRYGSLHEVQQCL 641
++ R G + E + L
Sbjct: 279 VINGLCREGQMKETSEIL 296
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 191/431 (44%), Gaps = 47/431 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++R + +++ S ++ +
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS--GLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A+++
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 359 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
+V +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S V +G + +M +KD N + +++ S D +F
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF----- 529
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ +M+ G+S + +++ +L+ S ++ A +++ +R
Sbjct: 530 -----------------LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV+Y T I C +A L +EM Y I+P L TY TL+ A + G +H+
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632
Query: 637 VQQCLAVYQDM 647
+ +CL YQ M
Sbjct: 633 M-ECL--YQQM 640
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 163/393 (41%), Gaps = 65/393 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N +++AC AG+ +A + + E G D F+Y+ ++ +
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSE--GAPPPDAFSYNVVIAGLWRSGK 209
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
ALKV ++M+ GV PN IT++++I+ G +E L ++ML G +PN N+
Sbjct: 210 GSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNV 269
Query: 439 LLQACVEACQ--------------------------FDRAFRLFRSWTLS-------KTQ 465
LL A + FD R S T+ K
Sbjct: 270 LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 329
Query: 466 VALGEDY----------DGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
V LG DG + + + H T N + N + D R +F
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389
Query: 512 -----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+P TYN L+ C KA L+ EM G+ P+ ++ LIDA
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G +G +E +L M++ G+ DV+++ + +K ++ ++ +A ++ ++M + + PN
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y +++ A G + +Q + + M +G
Sbjct: 510 QVYNSIIDAYIESG---DTEQAFLLVEKMKNSG 539
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + V+ F K + A+ D +PN + +IID GD ++ + E
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E+ E+ + L+ TY T+V A A + + ML V P++
Sbjct: 595 TDKALELLQEMNKYGIRPTLR----TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ +++A + L +EM + G
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ N+L+++ + V+A + G P+ +W ++ AC +G+++ AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 571 LKIM-REDGMSP-DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M R +G P D +Y I RS + A +F+EM + PN +TY T++
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 629 SRYGSL 634
+ G L
Sbjct: 240 VKGGDL 245
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 186/413 (45%), Gaps = 41/413 (9%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+++ GD K+ + Y ++ + + ++ ++S++ A + +
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + +V TYS++
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGTLKKMRSDGV-EPNVVTYSSL 312
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD-----GNTDR-IS 480
+P+ NIL+ A + + D+A +F R L+ V G D G+ D +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
E + +T PN + Y L+ CT + + + L+ E
Sbjct: 433 YFEQMIDEGLT--PNII-------------------VYTSLIHGLCTCDKWDKAEELILE 471
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ N I + +ID+ G V + ++ +M G+ PD++ Y T I C + +
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A L M ++P++VTY TL+ Y + + LA++++M +G
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLING---YCRVSRMDDALALFKEMVSSG 581
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 21/322 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + A E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL----HMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T+SS+I A A +++AM + M++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ N +L + Q A TL K + DG +
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAI-----GTLKKMR------SDGVEPNVVTYSSLMN 314
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLS 545
N + + S KR +P TY L++ T V+ AL++ M G+
Sbjct: 315 YLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI A V+ A+ + MR+ G++P+VV Y T I V +S + A
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
FE+M + PN++ Y +L+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHG 455
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 53/365 (14%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMA 322
G C AI + +RS V N+ ++SLMN + + T +++ +M K G+
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+A+Y LL+ G V E++ + + G+ + D ++ ++ +A + A
Sbjct: 340 DIATYRTLLQGYATKGALV---EMHALLDLMVRNGI-QPDHHVFNILICAYAKQEKVDQA 395
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN + + ++I+ +G V+ AM FE+M+ G PN L+
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
++D+A L +E D+ NT F NS
Sbjct: 456 LCTCDKWDKAEELI-------------------------LEMLDRGICLNTIFF--NSII 488
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
S K + ++++++ +G+ P+ I++ LID C +G
Sbjct: 489 DSHCKEGRVIESEKLFDLMVR------------------IGVKPDIITYNTLIDGCCLAG 530
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++L M G+ PD+V Y T I R R+ A +LF+EM + PN++TY
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 623 TLLRA 627
+L+
Sbjct: 591 IILQG 595
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 59/394 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ T+IDV G + +E
Sbjct: 380 NILIC----AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T NI V+ SL++ E+ M G+ + +N ++ + C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +++++ L + +K D+ TY+T++ A A K+ M+S GV P+
Sbjct: 496 RVIESEKLF----DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ +LIN ++ A+ LF+EM+ +G PN NI+LQ + A L+ S
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T S TQ+ L +TY
Sbjct: 612 ITKSGTQLEL-----------------------------------------------STY 624
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + +AL + L ++ I+I A G ++ A +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ PDV Y+ + + L++ LF M+
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 31/388 (7%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 39 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K ++D T++ ++K + AD + V M
Sbjct: 99 IGCCCRAGRLDLGFAALGNV----VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
G P+ ++++L+ + ++A+ L M G P+ N +L +
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSF 505
D+A+ + L + + Y + + DK + NT V N
Sbjct: 215 GDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT--MVKNG----- 266
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN ++ C+ +A+ + +MR+ G+ PN ++++ L++ +G
Sbjct: 267 -----VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
A +I M + G+ PD+ Y T ++ L + +L + M IQP+ +
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A Y +V Q + V+ M + G
Sbjct: 382 LICA---YAKQEKVDQAMLVFSKMRQHG 406
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + P++ T+ID C + G ++ +
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S V +I + +L+N + L ++K M GV ++ +YNI+L+
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-------------- 385
T A+E+Y + K +L++ TY+ I+ AL++
Sbjct: 602 TAAAKELYVSI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 386 -----------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+D+ +A G+ P+ T+S + G +E+ LF M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC +S+ N +++ ++ RA
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 171/395 (43%), Gaps = 56/395 (14%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--- 300
+D + K +Y +I G G ++ +++ ++S + N+ +N++++
Sbjct: 213 FDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGK 272
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ K +E++ M GV D ++N LL C G A+ ++ + KG+ +
Sbjct: 273 GGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA---MVDKGIDQ 329
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+FTY+T++ +A ++ +M + + PN +T+S++I+ A G ++ A+++
Sbjct: 330 -DIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNM 388
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM G + N LL + +F++A D
Sbjct: 389 FNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQAL-----------------------DVCK 425
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNE 538
ME+ + TYN L+ Y V+ + E
Sbjct: 426 EMENA------------------------GIRKDVVTYNALLAGYGKQYRYDEVRRVFEE 461
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +SPN ++++ LID G + A+++ + ++ G+ DVV Y+ I ++
Sbjct: 462 MKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGL 521
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
++ + +L +EM I+PN+VTY +++ A R S
Sbjct: 522 VESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSAS 556
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 192/451 (42%), Gaps = 50/451 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A++ +D+ K + PN+ +ID CG G ++ K I++ +
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S V + FNSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI E + K +L +V TYST++ +A AL + +M GV + ++
Sbjct: 348 DLAFEIMSE---MPTKNILP-NVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVS 403
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ A G EQA+ + +EM AG + N LL + ++D R+F
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMK 463
Query: 461 LSKTQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ L Y D S +K+ + + F K+ K Y+
Sbjct: 464 RGRVSPNL-LTYSTLIDVYSKGGLYKEAMEV-----------FREF-KQAGLKADVVLYS 510
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE---------GAL 568
L+ A C + + L++EM G+ PN +++ +IDA G S + + AL
Sbjct: 511 ALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTAL 570
Query: 569 QILKIM--------------REDGMSPDVVAYTTAIKVCVRSKRLKQA----FSLFEEMK 610
Q+ + +ED ++ A K C KQ +F++M
Sbjct: 571 QVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMH 630
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+PN+VT+ +L A SR S + L
Sbjct: 631 ELKIKPNVVTFSAILNACSRCDSFEDASMLL 661
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 44/305 (14%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S ++ + + + A+KV + M S G+ PN +T++++I+AC G+ ++ + +F
Sbjct: 225 VYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIF 284
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT----- 476
+ ML G +P+ N LL C ++ A RLF + V G D D T
Sbjct: 285 DGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA------MVDKGIDQDIFTYNTLL 338
Query: 477 DRISNMEHKDK----QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D + D S T N +PN TY+ ++ Y +V
Sbjct: 339 DAVCKGGQMDLAFEIMSEMPTKNILPN---------------VVTYSTMIDG----YAKV 379
Query: 533 KAL------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
L NEM+ +G+ + +S+ L+ G E AL + K M G+ DVV Y
Sbjct: 380 GRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTY 439
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ + R + +FEEMK ++ PNL+TY TL+ S+ G L+ ++ + V+++
Sbjct: 440 NALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSK-GGLY--KEAMEVFRE 496
Query: 647 MWKAG 651
+AG
Sbjct: 497 FKQAG 501
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 102/232 (43%), Gaps = 26/232 (11%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ N + +GK+ R ++ K+ SPN+ T+IDV G Y ++
Sbjct: 433 RKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + + ++ ++++L++ + ++ ++ + M K G+ ++ +YN ++ A
Sbjct: 493 VFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFG 552
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY----------STIVKVFADAKWWQMA--- 382
+ + + GE L+ + + + V + I+++F +
Sbjct: 553 RSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAK 612
Query: 383 ----------LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
L V + M + PN +T+S+++NAC+ E A L EE+
Sbjct: 613 NSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEEL 664
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G VE A + ++G V A++ I RS +A +F+ MK
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PNLVTY ++ A + G E ++ + ++ M G
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGV--EFKKVVEIFDGMLSNG 291
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 187/437 (42%), Gaps = 54/437 (12%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
N +R + +L + ++ P++ C ++I G C G K+ + E L
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIR--GFCRIGKTKKATWVMEILE 176
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ +N L++ + ++ L+V + ++ V D+ +YN +L+ C +G
Sbjct: 177 QSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLK 233
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+ E DV TY+ +++ A+K+ ++M + G P+ +T+
Sbjct: 234 QAMEVLDRQLQKECYP----DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 289
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN G +++A+ M GC+PN NI+L++ ++ A +L S L
Sbjct: 290 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL-SDML 348
Query: 462 SKT-----------------QVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYS 503
K Q LG D +E T N+ ++ P H
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAID-------ILEKMPMHGCTPNSLSYNPLLHGF 401
Query: 504 SFDKRFSFK-------------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+K+ P TYN L+ A C D A ++N++ + G SP
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ +ID G E A+++L MR G+ PD++ Y++ + R ++ +A F +
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521
Query: 609 MKHYQIQPNLVTYITLL 625
++ I+PN +TY +++
Sbjct: 522 LEGLGIRPNAITYNSIM 538
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 163/363 (44%), Gaps = 37/363 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+++ G + D+ +YN+L+ C +G EI ++ L+ V DV TY+TI++
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSG------EIDNALQVLDRMNVAP-DVVTYNTILRTLC 227
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ + A++V + L P+ IT++ LI A V QAM L +EM G +P+
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 287
Query: 435 CCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTDRISN 481
N+L+ + + D A + + + ++ + G D +S+
Sbjct: 288 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK-LLSD 346
Query: 482 MEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDYY 530
M K T N + N +K P + +YN L+ C +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++ Y T
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + ++A L +EM+ ++P+++TY +L+ SR G +V + + + D+
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG---KVDEAIKFFHDLE 523
Query: 649 KAG 651
G
Sbjct: 524 GLG 526
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 42/342 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-QPNVITHNI 326
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGED--YDGNT 476
C PNS N LL + + DRA T + AL +D D
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
+ ++ + K P TYN ++ R
Sbjct: 447 EILNQLSSK------------------------GCSPVLITYNTVIDGLSKVGKTERAIK 482
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EMR GL P+ I+++ L+ G V+ A++ + G+ P+ + Y + +
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+S++ +A M + +P TY L+ + G E
Sbjct: 543 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 584
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 282 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 341
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 342 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 456
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 457 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 560
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G MK + +++R++ ++ +N L+N L ++ NM G ++ ++
Sbjct: 268 GQAMK---LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 324
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+L++ C G + A+++ ++ KG V T++ ++ A+ + E
Sbjct: 325 NIILRSMCSTGRWMDAEKLLSDMLR---KGC-SPSVVTFNILINFLCRQGLLGRAIDILE 380
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G TPN+++++ L++ +++A+ + M+ GC P+ N LL A +
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440
Query: 448 QFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDR----ISNMEHKD-KQSITNTP 494
+ D A + + ++ V G G T+R + M K K I
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500
Query: 495 NFVPN-SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+ V S D+ F +P TYN +M C +A+ + M +
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
P ++TILI+ G + AL +L + G+ A A+K+
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 489
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 490 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEG 575
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 84/464 (18%)
Query: 219 RADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-KSR 276
R D+ N V + G+ ++ +A + + A + PN Y+C T+I G CG + ++
Sbjct: 179 RVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALG-CGRRLSQAL 237
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ + + I+ FN+LM +E+++ M+KLG++ D ++ L+ A
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297
Query: 335 CLAGNTVLAQEI---------------YGEV--------KHLEAKGVLK--------LDV 363
AG AQ Y E+ K EA G+ + L +
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKL 357
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+Y+ ++ + W+ A++ + G+TP+ ++WSSLI+ACANAG E+A+ + E
Sbjct: 358 ESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLER 417
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + C+PN V C +A++ KT GN ++ +
Sbjct: 418 MKTSDCQPN----------VVSWCGLLKAYQ--------KT---------GNWEKAEEIF 450
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
H S S S+++K +K T + ++ +G
Sbjct: 451 HAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYT------------------IEKLEELG 492
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ + ++W+ I A +G E A + K M + G P++V Y++ IK ++A
Sbjct: 493 MKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAE 552
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
S+F+ M I+PN LLRA YG E+++ + ++ M
Sbjct: 553 SVFKLMLRVGIRPNPQACCALLRA---YGKGKELEKVIIFFESM 593
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 122/299 (40%), Gaps = 35/299 (11%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L++DV + + +V + W A KV SAGV PN ++LI A + QA+
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQAL 237
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGE 470
LF M +AG E N L+ AC D A LF ++ T +
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297
Query: 471 DYDGNTDR--------------ISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPT 514
G DR I E+ + Q P Y F ++
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARAR-KPREAYGLFQVMLEQGYELK 356
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGAL 568
+YN L+ A Y R + MRT GL+P+ +SW+ LI AC +G E AL
Sbjct: 357 LESYNALLCA----YERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERAL 412
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L+ M+ P+VV++ +K ++ ++A +F M PN V + +LL A
Sbjct: 413 EVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSA 471
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 262 IIDVCGI------CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ CG+ G++ K+ I+ + N + SL++ K L +
Sbjct: 427 VVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIE 486
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+++LG+ D+ +++ + A AG LA+E + K + G L ++ TYS+++K +
Sbjct: 487 KLEELGMKLDVVAWSTTISALAKAGQWELAEEKF---KQMTKSGCLP-NIVTYSSLIKAY 542
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-LQAGCEPN 432
D W+ A V + ML G+ PN +L+ A +E+ + FE M Q G EP+
Sbjct: 543 GDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPD 602
Query: 433 SQCCNILLQACVEACQFDRAFR 454
+ AC ++ RA +
Sbjct: 603 KYAYAAIFWACWTCGEWQRAVK 624
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 46/243 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR----A 277
+ +C ++ + K + A + A PN + C + Y K R
Sbjct: 428 VSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNE------VAWCSLLSAYEKGRQWKKV 481
Query: 278 IY--EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKA 333
+Y E L + L++ +++ ++ A ++ L E +K M K G + ++ +Y+ L+KA
Sbjct: 482 LYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKA 541
Query: 334 CCLAGNTVLAQEI----------------------YGEVKHLEAKGV----------LKL 361
G A+ + YG+ K LE + ++
Sbjct: 542 YGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEP 601
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D + Y+ I WQ A+K + M AG TP+++ +++LIN G +++AM +
Sbjct: 602 DKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVL 661
Query: 422 EEM 424
E M
Sbjct: 662 ERM 664
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 22/365 (6%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT N+Y N L+N + + F + V M KLG+ D ++N L+ C+ G +
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEI---K 179
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E G + +G + DV +YST++ + MAL++ M G PN + ++++
Sbjct: 180 EAVGLFNEMVRRG-HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I++ LV AM L EM+ G P+ + +L + A LF
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM----- 293
Query: 465 QVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+G + NT + + + K+ + + V + + K+ + +P TYN LM
Sbjct: 294 ---VGRNVMPNTVTFTILVDGLCKEGMVSEARCV----FEAMTKKGA-EPNAYTYNALMD 345
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + +A +++ M G +P S+ ILI+ ++ A +L M E ++P
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y+T ++ + R ++A +LF+EM + P+L+TY TLL ++G L E + L
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465
Query: 642 AVYQD 646
Q+
Sbjct: 466 KSMQE 470
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 75/402 (18%)
Query: 294 FNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N ++K + ++ M + G D+ SY+ ++ C +GNT +A ++ ++
Sbjct: 165 FNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQL---LR 221
Query: 352 HLEAKGV----------------------------------LKLDVFTYSTIVKVFADAK 377
+E KG + DV TYSTI+ F
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A + +M+ V PNT+T++ L++ G+V +A +FE M + G EPN+ N
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYN 341
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
L+ Q D A ++ + M K + ++ N +
Sbjct: 342 ALMDGYCLNNQMDEAQKV-----------------------LDIMVDKGCAPVVHSYNIL 378
Query: 498 PNSH--YSSFDKRFS---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
N + D+ S P T TY+ LM+ C +A L EM + GL
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ ++++ L+D G+++ AL++LK M+E + PD+V Y I+ + +L+ A
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
LF ++ IQP + TY +++ + G E + +D
Sbjct: 499 LFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED 540
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 154/383 (40%), Gaps = 59/383 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
P++ TI+ G C G ++ ++ ++ +NV N F L++ + +
Sbjct: 265 PDVVTYSTILH--GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 311 -VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V++ M K G + +YN L+ CL AQ++ + + KG + V +Y+ +
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV---LDIMVDKGCAPV-VHSYNIL 378
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + +M +TP+T+T+S+L+ G ++A++LF+EM +G
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ + LL + D A +L +S SK +
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE------------------------ 474
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPN 547
P YNIL++ K L +++ G+ P
Sbjct: 475 -----------------------PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++TI+I G + A ++ + M +DG P+ +Y I+ ++++ A L +
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLID 571
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM + + T+ LL SR
Sbjct: 572 EMVGKRFSADSSTFQMLLDLESR 594
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 54/292 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V + + A K + + + M GVT N + + LIN V A+ +
Sbjct: 92 VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLG 151
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M + G +P++ N L+ C+E + A LF
Sbjct: 152 KMFKLGIQPDAITFNTLINGRCIEG-EIKEAVGLFNEMV--------------------- 189
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
R +P +Y+ ++ C AL + +M
Sbjct: 190 --------------------------RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++T +ID+ V A+ +L M + G+ PDVV Y+T + L
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A LF EM + PN VT+ L+ + G + E + V++ M K G
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR---CVFEAMTKKG 332
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 234 KRDLVSALR-AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +VS R ++A K + PN Y ++D + +++ + + + + ++
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N L+N L + M + + D +Y+ L++ C G QE
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR---PQEALNLF 430
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + + G+L D+ TYST++ ALK+ + M + + P+ + ++ LI
Sbjct: 431 KEMCSSGLLP-DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
AG +E A LF ++ G +P + I+++ ++ D A+ LFR
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 492 NTPNFVPNSHYSSFDKRFSF--------KPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
N F+ N+ S D SF +P+ + + + Y V +L N+M
Sbjct: 61 NNGGFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDL 120
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++ N S ILI+ +V A+ +L M + G+ PD + + T I +K+
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A LF EM QP++++Y T++ + G+ Q L
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLL 220
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 165/389 (42%), Gaps = 45/389 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E + ++ ++Y +++L+ + +V M++ G + +YN+L+ C
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G +E +G K +E G++ D FTY ++ ++ A + ++M A +
Sbjct: 291 RSGAV---EEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +++LI+ G ++A + +EM+ AG +PN + L++ + Q DRA L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
+ M + T T N + H+ K+ +F+
Sbjct: 407 LK-----------------------QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY+I++ C KA L+ EM T GL PN + LI G
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV A +I M + + PD+ Y + I + R++++ F +M+ + PN TY
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 563
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + G L +Q + Q M G
Sbjct: 564 GLIHGYLKNGDLESAEQ---LVQRMLDTG 589
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 122/570 (21%), Positives = 232/570 (40%), Gaps = 104/570 (18%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS----------------SPNMYICRTIIDVCG 267
VR+ + D ++ + +H S SPN+Y +I G
Sbjct: 407 LKQMVRD-SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH--G 463
Query: 268 IC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMAD 323
+C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D
Sbjct: 464 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ YN L+ G + + + + ++ +G+L + FTYS ++ + + A
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAE 579
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 580 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 639
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + AFR+ G + +G+ VP+ H
Sbjct: 640 SSSGNMEAAFRVLS-----------GIEKNGS---------------------VPDVH-- 665
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
Y+ L+ C R KA +++EM G+ PN + + LID S
Sbjct: 666 -------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 712
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 713 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L S G L +Q + + ++M+ G
Sbjct: 773 SVLTTGCSSAGDL---EQAMFLIEEMFLRG 799
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 137/350 (39%), Gaps = 36/350 (10%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++V++SL++ D + + M K GV ++ YN L+ C +G+ A+ ++
Sbjct: 663 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ AKG++ + TY++++ A + +ML+ G+TP+ +S L
Sbjct: 723 NSIL---AKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C++AG +EQAM L EEM G S N++ C R TL V
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCK---------RGKMQETLKLLHVI 829
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G N I N+ S + T + L +
Sbjct: 830 MGRGLVPNALTIENI-------------------ISGLSEAGKLSEVHTIFVELQQKTSE 870
Query: 528 DYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
R +L +M G P + ++ D C GN++ AL + ++ +Y
Sbjct: 871 SAARHFSSLFMDMINQGKIPLDVVDDMIRDHC-KEGNLDKALMLRDVIVAKSAPMGCSSY 929
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ R +L +A +L +EM I P+ + LL G + E
Sbjct: 930 LAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQE 979
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 191/431 (44%), Gaps = 47/431 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++R + +++ S ++ +
Sbjct: 63 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS--GLCRAGRMDETRVLMDEMASHSMFPD 120
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A+++
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 181 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
+V +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S V +G + +M +KD N + +++ S D +F
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF----- 351
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ +M+ G+S + +++ +L+ S ++ A +++ +R
Sbjct: 352 -----------------LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV+Y T I C +A L +EM Y I+P L TY TL+ A + G +H+
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454
Query: 637 VQQCLAVYQDM 647
+ +CL YQ M
Sbjct: 455 M-ECL--YQQM 462
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 147/357 (41%), Gaps = 63/357 (17%)
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G D F+Y+ ++ + ALKV ++M+ GV PN IT++++I+ G +
Sbjct: 8 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ-------------------------- 448
E L ++ML G +PN N+LL A +
Sbjct: 68 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127
Query: 449 FDRAFRLFRSWTLS-------KTQVALGEDY----------DGNTDR----ISNMEHKDK 487
FD R S T+ K V LG DG + + + H
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187
Query: 488 QSITNTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA-- 534
T N + N + D R +F +P TYN L+ C KA
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ EM G+ P+ ++ LIDA G +G +E +L M++ G+ DV+++ + +K
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ +A ++ ++M + + PN Y +++ A G + +Q + + M +G
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG---DTEQAFLLVEKMKNSG 361
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 26/371 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ V N +N++++ V DL+ + M G ++ +YN+LL C
Sbjct: 38 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 97
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + + E+ A + D FTYS + + L + + L GV
Sbjct: 98 RAGRMDETRVLMDEM----ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 153
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T S L+N G V +A + E ++ G P + N L+ + AF +
Sbjct: 154 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 213
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F +S + + Y+ + + +E +T + V S D
Sbjct: 214 FEQMKSRHIRPDHIT----YNALINGLCKLEM-----VTKAEDLVMEMEKSGVD------ 258
Query: 513 PTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ T+N L+ A T K ++++M+ G+ + IS+ ++ A +G + A+ I
Sbjct: 259 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 318
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M ++P+ Y + I + S +QAF L E+MK+ + ++VTY LL+ R
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 378
Query: 631 YGSLHEVQQCL 641
+ E ++ +
Sbjct: 379 SSQIDEAEELI 389
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
++D++ F + V+ F K + A+ D +PN + +IID GD ++
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E +++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+T A E+ E+ + L+ TY T+V A A + + ML V
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLR----TYHTLVSALASAGRVHDMECLYQQMLHKNVE 468
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
P++ + +++A + L +EM + G
Sbjct: 469 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 216/504 (42%), Gaps = 46/504 (9%)
Query: 151 DGSGFKL-LKNEC---QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPD 206
D GF+ L++ C + L+ SG V L+ L + +LPV D + R +++ D
Sbjct: 104 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMAD 163
Query: 207 VNLAIRYACIVPRADIL---FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
+N V D+L +C R G R+ + R + A+K P + C ++
Sbjct: 164 LNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFR-FLANKGVF--PTVKTCTFLL 219
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
+ KS ++E +R Q V+ ++Y+F++ +N ++ ++++ +M+KLGV
Sbjct: 220 SSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 278
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YN L+ C GN E + K K + + TYS ++ + +
Sbjct: 279 PNVVTYNNLIHGLCKHGN---LDEAF-RFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 334
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A V ++ L G TPN + +++LI+ G + A+ + +M+ G PNS N ++Q
Sbjct: 335 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 394
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ Q ++A + L + N + + H NS
Sbjct: 395 GFCKIGQMEQAECILEEM--------LSRGFSINPGAFTTIIHW----------LCMNSR 436
Query: 502 YSSFDKRF-------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWT 552
+ S RF + +P L+ C + A+ R + G N ++
Sbjct: 437 FES-ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI +GN++ A+++LK M E G D + Y T I C + ++++ F L EM
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 613 QIQPNLVTYITLLRARSRYGSLHE 636
I+P+ TY L+ R G L E
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDE 579
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 190/432 (43%), Gaps = 34/432 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++++ + + K +L ALR +PN +II G C G ++ I
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ--GFCKIGQMEQAECI 408
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
E++ S+ ++N F ++++ + +F L + M + + L+ C
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ + LE KG ++ T + ++ Q A+++ + ML G
Sbjct: 469 EGKHSDAVELW--FRLLE-KG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ IT+++LI+ C G VE+ L EM++ G EP++ N+L+ + D A L+
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Query: 457 ---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+S L G DG D+I E + +T +
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-----------------NL 627
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ + YN L++A C + V+A L ++MR+ G+ P +++ LI G +E A
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ MR++G+ P+VV YT I + ++ + ++ +EM Y I PN +TY ++ S
Sbjct: 688 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 747
Query: 630 RYGSLHEVQQCL 641
+ G + + L
Sbjct: 748 KSGDMKTAAKLL 759
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 165/390 (42%), Gaps = 30/390 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T++ G+C G + + ++ L + N+ N+L++ +++ +
Sbjct: 454 PNDGLLTTLVG--GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M + G + D +YN L+ CC G ++ GE+ K ++ D FTY+ +
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM----VKQGIEPDTFTYNLL 567
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + + S + PN T+ +I+ A +E+ LF E+L
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E NS N L++A AF+L RS + T G + I ME D
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN-IGRME--D 684
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ + + ++ P Y L+ C +V ++ EM + +
Sbjct: 685 AKCLIDEM------------RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++T++ID SG+++ A ++L M G+ PD V Y + ++++ F
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ + M + + +TY TL+ + +L
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 109/224 (48%), Gaps = 12/224 (5%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLNIYVF 294
L A+ ++ K PN+Y +ID G C D ++ ++ +L +QN+ LN V+
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMID--GYCKADKIEEGEKLFTELLTQNLELNSVVY 634
Query: 295 NSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N+L+ + T+E +K +M+ G+ A+Y+ L+ C G A+ + E++
Sbjct: 635 NTLIRAYCRNGN-TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+G+L +V Y+ ++ + + V ++M S + PN IT++ +I+ + +
Sbjct: 694 ---KEGLLP-NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKS 749
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
G ++ A L EM+ G P++ N+L + + + F++
Sbjct: 750 GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +M +G+SPN +++ LI GN++ A + + M +DG++ ++ Y+ I +
Sbjct: 268 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 327
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ +A S+ +E PN V Y TL+ + G+L + L + DM G
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA---LRIRGDMVSKG 381
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N G A+ +F + G P + C LL + V+A + ++++ W + +
Sbjct: 190 NVGF-RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY-----WVFETMRQGVS 243
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KRFSFKPTTTTYNILMKACCT- 527
D + I+ K V ++ FD ++ P TYN L+ C
Sbjct: 244 PDVYLFSTAINAFCKGGK---------VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKH 294
Query: 528 ----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ +R K +M G++ I++++LI+ A +LK E G +P+
Sbjct: 295 GNLDEAFRFK---EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE 351
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y T I + L A + +M I PN VT ++++ + G +++Q +
Sbjct: 352 VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG---QMEQAECI 408
Query: 644 YQDMWKAG 651
++M G
Sbjct: 409 LEEMLSRG 416
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ + M+K G AD+ Y L+ C GN +E++ E + KG+ +V TYS
Sbjct: 88 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDE---MLGKGI-SANVVTYSC 143
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V W+ A V M G+ P+ +T++ LI+ G AM L M++ G
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP++ N+LL C E D AF++ R + G+ D T DK
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVID-AFKILR------MMIEKGKKADVVTYNTLMKGLCDK 256
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ S FD +P T+N+L+ C + KA + +M G
Sbjct: 257 GKVDEALKLFN----SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 312
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++ +L+ C +G ++ A+++ K + + G P+ Y+ I + + L A L
Sbjct: 313 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 372
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
F EM+ + + P L Y TL+ + + GSL +Q +++Q+M A
Sbjct: 373 FCEMRTHGLNPALFDYNTLMASLCKEGSL---EQAKSLFQEMGNA 414
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 25/329 (7%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI+LK C G E G ++ + K V D+ +Y+T++ AK + A+ +
Sbjct: 2 NIVLKGLCRNGGVF---EAMGLIREMGRKSV-SPDIVSYNTLINGLCKAKKLKEAVGLLL 57
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M +AG PN++T ++L++ G +++AM L E M + G + + L+
Sbjct: 58 EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD-KQSITNTPNFVPNSHYSSFD 506
DR LF LG+ N S + H + N V N+
Sbjct: 118 NLDRGKELFDEM--------LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----- 164
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TY L+ C D A L+N M G P+++++ +L+ G V
Sbjct: 165 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 224
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYI 622
A +IL++M E G DVV Y T +K ++ +A LF M + ++PN+ T+
Sbjct: 225 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 284
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + G L + + +++ M K G
Sbjct: 285 MLIGGLCKEGRL---TKAVKIHRKMVKKG 310
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 159/402 (39%), Gaps = 63/402 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSL 297
+A +H P++ +ID G+C D + A + + NVT N+ +
Sbjct: 162 NAMAEHGIHPDVVTYTGLID--GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 219
Query: 298 MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D ++ + M + G AD+ +YN L+K C G A +++ + + +
Sbjct: 220 KEGLVID---AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM--FDNEN 274
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +VFT++ ++ A+K+ M+ G N +T++ L+ C AG +++A
Sbjct: 275 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 334
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
M L++++L G PNS +IL+ + + A LF
Sbjct: 335 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM------------------ 376
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ P YN LM + C + + K+L
Sbjct: 377 -----------------------------RTHGLNPALFDYNTLMASLCKEGSLEQAKSL 407
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM P+ IS+ +ID +G+ + ++ M E G+ PD + ++T I +
Sbjct: 408 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
L +A S E M P+ + Y +LL+ S G E+
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 175/419 (41%), Gaps = 37/419 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN C T++D G+C D A + E ++ + ++ ++ +L++ N +L
Sbjct: 66 PNSVTCTTLMD--GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M G+ A++ +Y+ L+ C G A + + A+ + DV TY+ +
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----AEHGIHPDVVTYTGL 179
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + M+ G P+ +T++ L++ GLV A + M++ G
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDRI 479
+ + N L++ + + D A +LF S + + G +G +
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 480 SNMEHK--DKQSITN--TPNFVPNSHYSSFDKR-----------FSFKPTTTTYNILMKA 524
+ K K S N T N + + + F P + TY+IL+
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359
Query: 525 CCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L EMRT GL+P + L+ + G++E A + + M PD
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++++ T I +++ + L +M ++P+ +T+ TL+ S+ G L E + L
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + +ID G C M ++ ++ ++R+ + ++ +N+LM L+
Sbjct: 348 PNSFTYSILID--GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M D+ S+N ++ AG+ +E+ ++K +E L+ D T+ST+
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMG--LRPDALTFSTL 461
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A E M+++G TP+ + + SL+ ++ G + ++L +M G
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ + M+K G AD+ Y L+ C GN +E++ E + KG+ +V TYS
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDE---MLGKGI-SANVVTYSC 289
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V W+ A V M G+ P+ +T++ LI+ G AM L M++ G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP++ N+LL C E D AF++ R + G+ D T DK
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVID-AFKILR------MMIEKGKKADVVTYNTLMKGLCDK 402
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ S FD +P T+N+L+ C + KA + +M G
Sbjct: 403 GKVDEALKLF----NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 458
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++ +L+ C +G ++ A+++ K + + G P+ Y+ I + + L A L
Sbjct: 459 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
F EM+ + + P L Y TL+ + + GSL +Q +++Q+M A
Sbjct: 519 FCEMRTHGLNPALFDYNTLMASLCKEGSL---EQAKSLFQEMGNA 560
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 27/405 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ C ++D +Y + ++Y + +V + ++L+ +A + V
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ K G ++ NI+LK C G E G ++ + K V D+ +Y+T++
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVF---EAMGLIREMGRKSV-SPDIVSYNTLIN 187
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AK + A+ + +M +AG PN++T ++L++ G +++AM L E M + G +
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD-KQSI 490
+ L+ DR LF LG+ N S + H +
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEM--------LGKGISANVVTYSCLVHGLCRLGQ 299
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N V N+ P TY L+ C D A L+N M G P++
Sbjct: 300 WKEANTVLNAM-----AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ +L+ G V A +IL++M E G DVV Y T +K ++ +A LF
Sbjct: 355 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414
Query: 609 MKHYQ--IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M + ++PN+ T+ L+ + G L + + +++ M K G
Sbjct: 415 MFDNENCLEPNVFTFNMLIGGLCKEGRL---TKAVKIHRKMVKKG 456
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 159/402 (39%), Gaps = 63/402 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSL 297
+A +H P++ +ID G+C D + A + + NVT N+ +
Sbjct: 308 NAMAEHGIHPDVVTYTGLID--GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365
Query: 298 MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D ++ + M + G AD+ +YN L+K C G A +++ + + +
Sbjct: 366 KEGLVID---AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM--FDNEN 420
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +VFT++ ++ A+K+ M+ G N +T++ L+ C AG +++A
Sbjct: 421 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 480
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
M L++++L G PNS +IL+ + + A LF
Sbjct: 481 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM------------------ 522
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ P YN LM + C + + K+L
Sbjct: 523 -----------------------------RTHGLNPALFDYNTLMASLCKEGSLEQAKSL 553
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM P+ IS+ +ID +G+ + ++ M E G+ PD + ++T I +
Sbjct: 554 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 613
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
L +A S E M P+ + Y +LL+ S G E+
Sbjct: 614 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 175/419 (41%), Gaps = 37/419 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN C T++D G+C D A + E ++ + ++ ++ +L++ N +L
Sbjct: 212 PNSVTCTTLMD--GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M G+ A++ +Y+ L+ C G A + + A+ + DV TY+ +
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM----AEHGIHPDVVTYTGL 325
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ + M+ G P+ +T++ L++ GLV A + M++ G
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW----------TLSKTQVALGEDYDGNTDRI 479
+ + N L++ + + D A +LF S + + G +G +
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 445
Query: 480 SNMEHK--DKQSITN--TPNFVPNSHYSSFDKR-----------FSFKPTTTTYNILMKA 524
+ K K S N T N + + + F P + TY+IL+
Sbjct: 446 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505
Query: 525 CCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L EMRT GL+P + L+ + G++E A + + M PD
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++++ T I +++ + L +M ++P+ +T+ TL+ S+ G L E + L
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + +ID G C M ++ ++ ++R+ + ++ +N+LM L+
Sbjct: 494 PNSFTYSILID--GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M D+ S+N ++ AG+ +E+ ++K +E L+ D T+ST+
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMG--LRPDALTFSTL 607
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A E M+++G TP+ + + SL+ ++ G + ++L +M G
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 29/374 (7%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+F S ++ + +K L+V+ ++GV + ASYNI+ + C G V A ++ +
Sbjct: 222 LFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQL---LLQ 278
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E +G + DV +YST++ + Q LK+ E+M G+ PN T++ +I G
Sbjct: 279 MELRGCIP-DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK--------T 464
V +A + EM+ G P+ L+ + A+RLF K T
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397
Query: 465 QVALGEDYDGNTDRISNMEHK------DKQSITNTPNFVPNSHYSSFDKRFSFK------ 512
V G G + H+ + +T T + FS
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457
Query: 513 ---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P TY L C + L++EM GL N ++ L++ +GN++ A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++K M G PD V YTT + +S+ + +A L +M ++QP +VT+ L+
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577
Query: 628 RSRYGSLHEVQQCL 641
G L + ++ L
Sbjct: 578 FCMSGMLEDGEKLL 591
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 158/390 (40%), Gaps = 61/390 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN Y +I + G ++ + ++ S+ + + ++ +L++ ++ +
Sbjct: 321 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTI 369
+ MQK + D +Y ++ C G + A +++ E+ K LE D TY+ +
Sbjct: 381 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP------DEVTYTAL 434
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + ML G+TPN +T+++L + G V+ A L EM + G
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
E N N L+ +A D+A +L + ++
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA--------------------------- 527
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
F P TY LM A C V+A L+ +M L P
Sbjct: 528 --------------------GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLF 606
+++ +L++ SG +E ++LK M E G+ P+ Y + IK C+R+ ++ ++
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN-MRATTEIY 626
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
M + P+ TY L++ + ++ E
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKE 656
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 161/391 (41%), Gaps = 61/391 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + F K ++ SA R +D +K SP+ +I T + +CG+C G M++ ++
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD-FITYTAV-ICGLCQTGRVMEADKLF 416
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + + + + +L++ +K ++ M ++G+ ++ +Y L C
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A E+ E+ + L+L+++TY+++V A A+K+ +DM AG P+
Sbjct: 477 GEVDTANELLHEM----CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 398 TITW-----------------------------------SSLINACANAGLVEQAMHLFE 422
+T+ + L+N +G++E L +
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592
Query: 423 EMLQAGCEPNSQCCNILL-QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
ML+ G PN+ N L+ Q C+ + + + + A G DGNT I
Sbjct: 593 WMLEKGIMPNATTYNSLIKQYCIRN-------NMRATTEIYRGMCAKGVVPDGNTYNILI 645
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
H +++ H K F+ T ++YN L+K + + L +M
Sbjct: 646 KGHCKARNMKEAWFL----HRDMVGKGFNL--TVSSYNALIKGFYKRKKFLEARELFEQM 699
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQI 570
R GL + + I D G +E L++
Sbjct: 700 RREGLVADREIYNIFADINYDEGKMELTLEL 730
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 162/377 (42%), Gaps = 42/377 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E + ++ ++Y +++L+ + +V M++ G + +YN+L+ C
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G +E +G K +E G++ D FTY ++ ++ A + ++M A +
Sbjct: 164 RSGAV---EEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +++LI+ G ++A + +EM+ AG +PN + L++ + Q DRA L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
+ M + T T N + H+ +K+ +F+
Sbjct: 280 LK-----------------------QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 513 --------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY+I++ C KA L+ EM T GL PN + LI G
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV A +I M + + PD+ Y + I + R++++ F +M+ + PN TY
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436
Query: 623 TLLRARSRYGSLHEVQQ 639
L+ + G L +Q
Sbjct: 437 GLIHGYLKNGDLESAEQ 453
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 121/569 (21%), Positives = 228/569 (40%), Gaps = 102/569 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 224 FCNFVREFGKKRDLV---------------SALRAYDASKKHLSSPNMYICRTIIDVCGI 268
VR+ + + A R + SPN+Y +I G+
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH--GL 337
Query: 269 C--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADM 324
C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D+
Sbjct: 338 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 397
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
YN L+ G + + + + ++ +G+L + FTYS ++ + + A +
Sbjct: 398 YCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAEQ 453
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 454 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 513
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+ + AFR+ +S +E VP+ H
Sbjct: 514 SSGNMEAAFRV-----------------------LSEIEKNGS---------VPDVH--- 538
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
Y+ L+ C R KA +++EM G+ PN + + LID SG
Sbjct: 539 ------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 586
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 587 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 646
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L S G L +Q + + ++M+ G
Sbjct: 647 VLTTGCSSAGDL---EQAMFLIEEMFLRG 672
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 141/351 (40%), Gaps = 37/351 (10%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++V++SL++ D + + M K GV ++ YN L+ C +G+ A+ ++
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ AKG++ + TY++++ A + +ML+ G+TP+ +S L
Sbjct: 596 NSIL---AKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C++AG +EQAM L EEM G S N++ C R TL V
Sbjct: 652 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCK---------RGKMQETLKLLHVI 702
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G N I N+ S + T + L +
Sbjct: 703 MGRGLVPNALTIENI-------------------ISGLSEAGKLSEVHTIFVELQQKTSE 743
Query: 528 DYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
R +L +M G P + ++ D C GN++ AL + ++ +Y
Sbjct: 744 SAARHFSSLFMDMINQGKIPLDVVDDMIRDHC-KEGNLDKALMLRDVIVAKSAPMGCSSY 802
Query: 587 TTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ R +L +A +L +EM K +QP LV + + R + L++
Sbjct: 803 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNK 853
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ + Y ++ + + ++ ++S++ A + +EV M K GVM D +Y
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N +L C +G +E G +K + + GV + +V TYS+++ A K+ +
Sbjct: 275 NSILHGYCSSGQ---PKEAIGTLKKMRSDGV-EPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P+ T+ +L+ A G + + L + M++ G +P+ NIL+ A +
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD-----GNTDR-ISNMEHKDKQSITNTPNFVP 498
+ D+A +F R L+ V G D G+ D + E + +T PN +
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT--PNII- 447
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
Y L+ CT + + + L+ EM G+ N I + +ID
Sbjct: 448 ------------------VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ G V + ++ +M G+ PD++ Y T I C + ++ +A L M ++P
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++VTY TL+ Y + + LA++++M +G
Sbjct: 550 DIVTYGTLING---YCRVSRMDDALALFKEMVSSG 581
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 21/322 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + A E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL----HMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A +ML G+ P+ +T+SS+I A A +++AM + M++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ N +L + Q A TL K + DG +
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAI-----GTLKKMR------SDGVEPNVVTYSSLMN 314
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLS 545
N + + S KR +P TY L++ T V+ AL++ M G+
Sbjct: 315 YLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI A V+ A+ + MR+ G++P+VV Y T I V +S + A
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
FE+M + PN++ Y +L+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHG 455
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 53/365 (14%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMA 322
G C AI + +RS V N+ ++SLMN + + T +++ +M K G+
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+A+Y LL+ G V E++ + + G+ + D ++ ++ +A + A
Sbjct: 340 DIATYRTLLQGYATKGALV---EMHALLDLMVRNGI-QPDHHVFNILICAYAKQEKVDQA 395
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN + + ++I+ +G V+ AM FE+M+ G PN L+
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
++D+A L +E D+ NT F NS
Sbjct: 456 LCTCDKWDKAEELI-------------------------LEMLDRGICLNTIFF--NSII 488
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
S K + ++++++ +G+ P+ I++ LID C +G
Sbjct: 489 DSHCKEGRVIESEKLFDLMVR------------------IGVKPDIITYNTLIDGCCLAG 530
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++L M G+ PD+V Y T I R R+ A +LF+EM + PN++TY
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 623 TLLRA 627
+L+
Sbjct: 591 IILQG 595
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 59/394 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ T+IDV G + +E
Sbjct: 380 NILIC----AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T NI V+ SL++ E+ M G+ + +N ++ + C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +++++ L + +K D+ TY+T++ A A K+ M+S GV P+
Sbjct: 496 RVIESEKLF----DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ +LIN ++ A+ LF+EM+ +G PN NI+LQ + A L+ S
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T S TQ+ L +TY
Sbjct: 612 ITKSGTQLEL-----------------------------------------------STY 624
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + +AL + L ++ I+I A G ++ A +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ PDV Y+ + + L++ LF M+
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 31/388 (7%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 39 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K ++D T++ ++K + AD + V M
Sbjct: 99 IGCCCRAGRLDLGFAALGNV----VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
G P+ ++++L+ + ++A+ L M G P+ N +L +
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSF 505
D+A+ + L + + Y + + DK + NT V N
Sbjct: 215 GDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT--MVKNG----- 266
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN ++ C+ +A+ + +MR+ G+ PN ++++ L++ +G
Sbjct: 267 -----VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
A +I M + G+ PD+ Y T ++ L + +L + M IQP+ +
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A Y +V Q + V+ M + G
Sbjct: 382 LICA---YAKQEKVDQAMLVFSKMRQHG 406
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 112/268 (41%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + P++ T+ID C + G ++ +
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S V +I + +L+N + L ++K M GV ++ +YNI+L+
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-------------KVFADAKWWQMALKVK 386
T A+E+Y + K +L++ TY+ I+ ++F + + L+ +
Sbjct: 602 TAAAKELYVSI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 387 ------------------EDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+D+ +A G+ P+ T+S + G +E+ LF M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC +S+ N +++ ++ RA
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 38/427 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ TIID G+C RA + + + + V ++ +N++++ A +
Sbjct: 267 PDVVTYNTIID--GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V ++M V D+ +YN L+ G +E+ ++ + A+G L DV TYS +
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW---KEVVRRLEEMYARG-LDPDVVTYSLL 380
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ M+ G+ PN + L++ A G + L + M+ G
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEH 484
PN+ NI+L A + D A +F + LS V G D R+ +
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 485 KDKQSITN--TPN-FVPNS---------HYSSFDKRF------SFKPTTTTYNILMKACC 526
K Q I + TPN V NS + ++ F +P +N +M C
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + A L++ M VG+ PN IS+ LI +G + A Q+L +M G+ PD++
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T ++ ++ R+ A+ LF EM + P VTY T+L+ E ++ +Y
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE---LY 677
Query: 645 QDMWKAG 651
+M K+G
Sbjct: 678 LNMIKSG 684
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 182/411 (44%), Gaps = 38/411 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI------YEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ C T++ G+C + A+ ED N T N+ +N++++ A +
Sbjct: 159 PNVVSCNTLLK--GLCNEKRVEEALELLHTMAED-GGGNCTPNVVTYNTIIDGLCKAQAV 215
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
V ++M GV D+ +Y+ ++ C A A+ G ++H+ KGV K DV T
Sbjct: 216 DRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE---GVLQHMIDKGV-KPDVVT 271
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+TI+ A+ A V + M+ GV P+ +T++++I+ A V++A + + M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-DRISNMEH 484
+P+ Q N L+ + ++ R + A G D D T + +
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL------EEMYARGLDPDVVTYSLLLDYLC 385
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTV 542
K+ + F Y K KP T Y IL+ A + L++ M
Sbjct: 386 KNGKCTEARKIF-----YCMIRK--GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SPN+ + I++ A ++ A+ I M + G+SPDVV Y I + R+ A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYG--SLHEVQQCLAVYQDMWKAG 651
F +M + + PN V + +L+ YG ++ ++ ++ +MW G
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLV-----YGLCTVDRWEKAEELFFEMWDQG 544
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 170/421 (40%), Gaps = 55/421 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ + +H SP++ +ID G + + + + VT N
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
VFNSL+ + E++ M GV ++ +N ++ C G ++AQ +
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL-- 571
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E GV + +V +Y+T++ A A ++ + M+S G+ P+ I++ +L+
Sbjct: 572 -IDSMERVGV-RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGY 629
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G ++ A LF EML+ G P + + +LQ +F A L+ + S
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS------ 683
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G+ +D TYNI++ C
Sbjct: 684 GQQWD-----------------------------------------IYTYNIILNGLCKT 702
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A + + + L PN I++TI+ID G + A+ + + G+ P+VV Y
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+K ++ L + +LF M+ P+ V ++R+ G + L+ +
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDE 822
Query: 647 M 647
M
Sbjct: 823 M 823
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 19/298 (6%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D+ TYS + F + +L G N + + L+N +A V++AM
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 419 H-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN-- 475
L M + GC PN CN LL+ + + A L + + ED GN
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHT---------MAEDGGGNCT 196
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
+ ++ D + DK K TY+ ++ C R +
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK--GVKLDVVTYSTIIDGLCKAQAVDRAE 254
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ M G+ P+ +++ +ID + V+ A +L+ M + G+ PDVV Y T I
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 314
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++ + +A + + M ++P++ TY L+ G EV + L ++M+ G
Sbjct: 315 CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL---EEMYARG 369
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 149/376 (39%), Gaps = 30/376 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH-----DLKFTLEVYKNMQKL---GVMADMASYNI 329
++++L ++ FN L+NV A + + ++ M + V D+ +Y+I
Sbjct: 36 LFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSI 95
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK-ED 388
L C G +G L K +++ + ++ DAK A+ +
Sbjct: 96 LTGCFCRLGRIEHGFAAFG----LILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG---CEPNSQCCNILLQACVE 445
M G PN ++ ++L+ N VE+A+ L M + G C PN N ++ +
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A DRA + + ++ + Y D + + D+
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDV-VTYSTIIDGLCKAQAVDRAE---------GVLQHMI 261
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
DK KP TYN ++ C R + ++ M G+ P+ +++ +ID +
Sbjct: 262 DK--GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ A +L+ M + + PD+ Y I + + K+ EEM + P++VTY
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379
Query: 624 LLRARSRYGSLHEVQQ 639
LL + G E ++
Sbjct: 380 LLDYLCKNGKCTEARK 395
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 57/375 (15%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+R+Q + L V N ++ V A +++ V+ M GV D +Y ++ C G
Sbjct: 786 DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 845
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A E+ +G + +D T + I+ F + A+ + G++PN
Sbjct: 846 NVLEADRWICEMME---RGFV-VDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNL 901
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I +SS+I+ G V+QA L EEM++ G +PN L+ + +RAFRLF
Sbjct: 902 INYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFL- 960
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + N+ PN H TY
Sbjct: 961 ------------------------------KLIRSDNYKPNVH---------------TY 975
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + R + L M+ GL PN ++T LID +GN A +++++M
Sbjct: 976 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G P+ Y + + + R ++AF L QI+ + VTY L+ + + +
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRA---D 1092
Query: 637 VQQCLAVYQDMWKAG 651
+ Q L M+K G
Sbjct: 1093 MNQALVFLNKMFKVG 1107
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 21/366 (5%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ C + +RA+ + + ++ N+ ++S+++ +K E+ + M K G
Sbjct: 873 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 932
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++ L+ C G T A ++ +K + + K +V TY+ ++ + +
Sbjct: 933 KPNVYTHTSLIHGLCKKGWTERAFRLF--LKLIRSDN-YKPNVHTYTAMISGYCKEEKLS 989
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M G+ PNT T+++LI+ AG +A L E M G PN+ N ++
Sbjct: 990 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + AF+L + ++ + DG T I E + + F+ N
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQNQIEA------DGVTYTILISEQCKRADMNQALVFL-NK 1102
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ + F+P Y L+ A C + L +E+ +GL+P ++T +I
Sbjct: 1103 MF-----KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 1157
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A++ + M + G +PD ++Y I + RL +A L++ M + P
Sbjct: 1158 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 1217
Query: 619 VTYITL 624
VT +TL
Sbjct: 1218 VTRVTL 1223
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN++ +I G C + SRA ++E ++ Q + N + +L++ A +
Sbjct: 970 PNVHTYTAMIS--GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 1027
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY--GEVKHLEAKGV--------- 358
E+ + M G + +YN ++ C G A ++ G +EA GV
Sbjct: 1028 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087
Query: 359 --------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ D+ Y+T++ F + + K+ ++++ G+ P
Sbjct: 1088 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++S+I V A+ F++M GC P+S L+ + + D A +L+
Sbjct: 1148 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 188/424 (44%), Gaps = 26/424 (6%)
Query: 231 FGKKRDLVSALRAYD---ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
F KK DL AL A+D K + S + + +I + G G + ++ L+
Sbjct: 147 FHKKFDL--ALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGF 204
Query: 288 TLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+L++Y + SL++ A+ ++ + V+K M++ G + +YN++L G +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPW--NK 262
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I V+ +++ G+ D +TY+T++ Q A +V E+M +AG + + +T+++L+
Sbjct: 263 ITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALL 321
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ + ++AM + EM G P+ N L+ A D A L T+
Sbjct: 322 DVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 466 VALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D T +S E K +S N + N+ KP T+N +K
Sbjct: 382 ----PDVFTYTTLLSGFERAGKVESAMNIFEEMRNA---------GCKPNICTFNAFIKM 428
Query: 525 CCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ + + +E+ GLSP+ ++W L+ G +G + K M+ G P+
Sbjct: 429 YGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ T I R +QA +++ M + P+L TY T+L A +R G + ++ LA
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 643 VYQD 646
+D
Sbjct: 549 EMED 552
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 169/409 (41%), Gaps = 56/409 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + F A+ + ++ P + I++V G G + K ++ E +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + Y +N+L+ + +V++ M+ G D +YN LL + G +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLD---VYGKS 327
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E + +E G + TY++++ +A A+++K M G P+ T
Sbjct: 328 HRPKEAMKVLNEMELNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG VE AM++FEEM AGC+PN C F+ +++
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKPN-------------ICTFNAFIKMY---- 429
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GN + +M I + N P T+N
Sbjct: 430 -------------GNRGKFVDM-----MKIFDEINVC------------GLSPDIVTWNT 459
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ G P ++ LI A G+ E A+ + + M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 187/406 (46%), Gaps = 27/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + I+E++R+ NI FN+ + + + KF +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EM+ I P+++TY T + + Y + ++ + V + M K G
Sbjct: 722 FSEMRDSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHG 764
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 37/420 (8%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ D+ + + F + + SA+ ++ + PN+ I + G G ++
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
I++++ ++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAY 499
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
G+ A +Y + + GV D+ TY+T++ A W+ + KV +M
Sbjct: 500 SRCGSFEQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC------- 447
PN +T+ SL++A AN + L EE+ EP + +LL+ V C
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLP 611
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ +RAF + S L S + ++ + N V + + K
Sbjct: 612 EAERAFSELKERGFSPDITTLN----------SMVSIYGRRQMVGKANEVLD-----YMK 656
Query: 508 RFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F P+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + +
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +I MR+ G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 717 DASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P + +T++ VC C ++ + +L+ + + +I NS++++ + EV
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEV 651
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G MA+YN L+ + + ++EI ++ + AKG+ K D+ +Y+T++
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI---LREILAKGI-KPDIISYNTVIY 707
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A ++ +M +G+ P+ IT+++ I + A + E+A+ + M++ GC P
Sbjct: 708 AYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N N ++ + + D A +LF
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEA-KLF 791
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVG 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRD---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 179/427 (41%), Gaps = 55/427 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ TII+ I G K+ ++L +Q + + + +L+N + + +K L +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K V ++ Y+ L+ C G + G + +G+L LD TY++++
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDG---FVSDALGLCSQIGERGIL-LDAVTYNSLID 238
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL------------------ 413
WQ ++ M+ V P+ T++ LI+A G
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 414 -----------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
V +A LF M++ G EP+ N+L+ + D A LF
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ +K V Y+ D + N I++ + H S+ P
Sbjct: 359 KELC-NKNLVPTIASYNSLIDGLCN-----SGRISHVKKLLDEMHGSAQ------PPDVV 406
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ A C + ++AL + M G+ PN +++ ++D NV A I M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD++ Y I +++ + +A LF+EM+H + P++ +Y +L+ G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 635 HEVQQCL 641
VQ+ L
Sbjct: 527 PHVQELL 533
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 193/452 (42%), Gaps = 32/452 (7%)
Query: 211 IRYACIVPRADI---LFCNFVREFGKK----RDLVSALRAYDASKKHLSSPNMYICRTII 263
IRYA +P+ I F +F + K R++ A+ ++ + P + ++
Sbjct: 5 IRYA--IPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLL 62
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVM 321
G Y + +++ L+S+ ++ +I F L+N H F + + K G
Sbjct: 63 GAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ 122
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ ++N ++ C+ G A + ++L A+G L D FTY T++ + +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDF---CQNLLAQGYL-FDQFTYGTLINGLSKNGQIKA 178
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL + ++M + V PN + +S+LI+ G V A+ L ++ + G ++ N L+
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C ++ +L +DY N + + K+ + +
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNI--LIDALCKEGRILE------AQGV 287
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KR KP TYN LM+ C+ + + + L N M GL P+ +++ +LID
Sbjct: 288 LAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ V+ A+ + K + + P + +Y + I S R+ L +EM P++V
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY L+ A + G + E L V M K G
Sbjct: 407 TYNILIDALCKEGRILEA---LGVLVMMMKKG 435
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 58/426 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQK 317
++ID C G + + + + +NV + Y FN L++ + + LE V M K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI-LEAQGVLAMMSK 293
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G D+ +YN L++ C N A+E++ + K L+ DV Y+ ++ + K
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRM----VKRGLEPDVLNYNVLIDGYCKTK 349
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + +++ + + P +++SLI+ N+G + L +EM + P+ N
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 438 ILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
IL+ A C E R+ + + + G + ++ D + N N
Sbjct: 410 ILIDALCKEG-------RILEALGVLVMMMKKGV----KPNIVTYNAMMDGYCLRNNVN- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
V ++ K +P YN+L+ C +A L EMR L P+ S+ L
Sbjct: 458 VAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE------ 608
ID G + ++L M + G SPDV+ Y + +++ +A SLF +
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW 576
Query: 609 -------------------------MKH---YQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+KH + PN+ TY L+ A + GS E
Sbjct: 577 PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636
Query: 641 LAVYQD 646
L+ +D
Sbjct: 637 LSKMED 642
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L V M K GV ++ +YN ++ CL N +A++I+ + K L+ D+ Y+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM----VKSGLEPDILNYNV 480
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ + ++M + P+ +++SLI+ N G + L +EM +G
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG--EDYDGNTDRISNMEHKD 486
P+ NILL A + FD+A LFR Q+ G D+ N + N+ +
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFR-------QIVEGIWPDFYTNHAIVDNLCKGE 593
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
K + ++LM C SP
Sbjct: 594 KLKMAE----------------------DALKHLLMHGC-------------------SP 612
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++TILI+A G+ A+ +L M ++ PD + + I V ++ +A L
Sbjct: 613 NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLR 672
Query: 607 EEM 609
EEM
Sbjct: 673 EEM 675
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 180/413 (43%), Gaps = 45/413 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + C +++ + + +Y ++ + ++Y FN ++NV LK +
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV ++ +YN ++ C +G A I +K + ++ D FTY +++
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK----RQKIEPDSFTYGSLIS 299
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E+M+ G+ P+ + +++LI+ N G ++ A +EML+ G P
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A LF + + + E ++ K
Sbjct: 360 TMSTYNSLIHA------------LFMEQRTDEAECMIKE-----------IQEKGISPDA 396
Query: 492 NTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNE 538
T N + N + + + +F KPT TY L+ +A L +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G+ P+ I + LID + NV+GA ++LK M + PD V + T ++ R +
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A LF+EMK I+P+ +++ TL+ SR G +++ V +M G
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRG---DIKDAFRVRNEMLDTG 566
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 157/369 (42%), Gaps = 57/369 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G ++ I+E++ + + + ++N+L++ N +L M K G+
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M++YN L+ A + T A+ + +K ++ KG+ D TY+ ++ + +
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECM---IKEIQEKGI-SPDAITYNILINGYCRCANAK 413
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + ++ML++G+ P T++SL++ + +++A LF+++ G P++ N L+
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AF L + D D
Sbjct: 474 DGHCSNSNVKGAFELLK-------------DMD--------------------------- 493
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
R P T+N +M+ C + + L +EM+ G+ P+HIS+ LI
Sbjct: 494 -------RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+++ A ++ M + G +P V+ Y ++ +++ A L +EM + P+
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Query: 619 VTYITLLRA 627
TY TL+
Sbjct: 607 TTYFTLIEG 615
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 167/420 (39%), Gaps = 98/420 (23%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLF-----LKLNRTEAAWVL--YAEMFRLRIKSSVYTFN 225
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G H+E GV K ++ TY+TIV + + + A +
Sbjct: 226 IMINVLCKEGKLKKAKDFVG---HMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTT 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + P++ T+ SLI+ G +E+A +FEEM+Q G P++ N L+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A S Y +
Sbjct: 342 LDMA-----------------------------------------------SAYKDEMLK 354
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT +TYN L+ A + +A ++ E++ G+SP+ I++ ILI+ N +
Sbjct: 355 KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ------------------------- 601
A + M G+ P YT+ + V + R+K+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 602 ----------AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
AF L ++M ++ P+ VT+ T+++ R G + E ++ ++ +M + G
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE---LFDEMKRRG 531
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++I + LI +C + ++A F M + G P + CN LL ++ + + A+ L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + ++ Y N + N+ K+ + + +FV + S KP
Sbjct: 210 AEMFRLRIKSSV---YTFNI--MINVLCKEGK-LKKAKDFVGHMETSGV------KPNIV 257
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN ++ C+ RV+A ++ M+ + P+ ++ LI G +E A +I +
Sbjct: 258 TYNTIVHGYCSSG-RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE 316
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M + G+ P V Y T I L A + +EM I P + TY +L+ A
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 83/172 (48%), Gaps = 33/172 (19%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ + S+ V + +FN+L++ + ++K E+ K+M ++ V D ++N +++ C
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512
Query: 336 LAGNTVLAQEIYGEVK-------HLE---------AKGVLK---------LD------VF 364
G A+E++ E+K H+ +G +K LD V
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
TY+ +V+ + +A ++ ++M+S G+TP+ T+ +LI A + ++
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 194/466 (41%), Gaps = 55/466 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 243 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 353
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 354 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 470 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+EM +QPN V Y L+RA R G L L + +DM G
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKG 688
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 480 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 593
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 654 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 687
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 688 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 450
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 749
Query: 641 L 641
L
Sbjct: 750 L 750
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 53/335 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 558
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 655
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 656 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM + PN +TY ++ +R G++ E + L
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 607 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 666
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 723
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 724 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 779
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 780 TEASRLLNEMREKGIVPDS 798
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 276
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 384
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 385 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 288
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++ +R + V ++M K G
Sbjct: 349 LVKGLTR---AKRIGDAYFVLKEMTKKG 373
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 195/473 (41%), Gaps = 46/473 (9%)
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD------------------I 222
+ ++ V L ++ + L N +N+ I C++ D I
Sbjct: 103 MRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTII 162
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYE 280
F + K + AL +D P++Y TII+ G+C G+ + + +
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIIN--GLCKMGETAAAAGLIK 220
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ ++ +++L++ D + L+++ M+ G+ + SY L++ C
Sbjct: 221 KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A + E+ L + D+ T+S ++ +F A V + M GV PN
Sbjct: 281 RWKEASAMLNEMTSLN----IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNV 336
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT++SL++ + V +A LF+ M+ GC+P+ +IL+ + D A +LF
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + NT + + H Q + + H + + P
Sbjct: 397 M--------IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY------LPDLC 442
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY++L++ C Y KA L M+ L PN + +TILID+ SGN+ A ++ +
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G+ PDV YTT I + L +A F +M+ PN +Y ++R
Sbjct: 503 FVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRG 555
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 170/392 (43%), Gaps = 59/392 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P + T+I+ G+C G++ ++ +++D+ ++ ++Y + +++N +
Sbjct: 159 PTIITFTTLIN--GLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M ++G D+ +Y+ L+ + C L E +++AKG+ V +Y+++
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLC---KDRLVNEALDIFSYMKAKGI-SPTVVSYTSL 272
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ W+ A + +M S + P+ +T+S LI+ G V +A + + M + G
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EPN N L+ ++L V + +D R
Sbjct: 333 EPNVITYNSLMHG----------------YSLQMEVVEARKLFDVMITR----------- 365
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
KP +Y+IL+ C K L NEM GL+PN
Sbjct: 366 --------------------GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+T LI A G + A ++ K M +G PD+ Y+ ++ + L +AF LF
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
M+ ++PNLV Y L+ + + G+L+ ++
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 154/344 (44%), Gaps = 27/344 (7%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M+ G+ + + NIL+ CL + L + +V L L+ + T++T++
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLG----LQPTIITFTTLING 170
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + AL++ +DM++ G P+ T++++IN G A L ++M + GC+P+
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230
Query: 433 SQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ L+ + + + A +F ++ +S T V+ G S K+ +
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG---LCSFSRWKEASA 287
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
+ N + P T+++L+ C + + ++ M +G+ PN
Sbjct: 288 MLNEMT------------SLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ L+ V A ++ +M G PDV +Y+ I KR+ +A LF
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM H + PN V+Y TL+ A + G L E ++ +++DM G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARE---LFKDMHTNG 436
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 173/396 (43%), Gaps = 61/396 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + K R + AL + K SP + ++I G+C + ++ A+
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ--GLCSFSRWKEASAML 289
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCL 336
++ S N+ +I F+ L+++ + LE V K M ++GV ++ +YN L+ L
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGN-VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V A++++ + +G K DVF+YS ++ + K A ++ +M+ G+TP
Sbjct: 349 QMEVVEARKLF---DVMITRGC-KPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP 404
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NT+++++LI+A G + +A LF++M G P+ ++LL+ + +AFRLF
Sbjct: 405 NTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF 464
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
R A+ Y KP
Sbjct: 465 R---------AMQGTY--------------------------------------LKPNLV 477
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y IL+ + C + + L +E+ GL P+ +T +I+ G ++ AL+ + M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
EDG P+ +Y I+ ++ K +A L EM+
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 172/407 (42%), Gaps = 73/407 (17%)
Query: 232 GKKRDLVS--ALRAYDASKKHLSSPNMY-------------ICRTIIDVCGICGDYMKSR 276
G DL+S +L + HL MY + TI+ + G C + M S
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL-INGYCRNGMMSE 378
Query: 277 A--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
A I + + Q L++ +N+++N L ++ M + GV+ D ++ L+
Sbjct: 379 ALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIH 438
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++G + + +K D+ TY+ ++ F + A ++ +M+S
Sbjct: 439 GHCKEGNMGKALSLFG----IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR 494
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ PN I+++ L+N N G V +A L++EM++ G +P CN +++ C
Sbjct: 495 KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG---YC----- 546
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
RS LSK LG+ IS
Sbjct: 547 ----RSGDLSKADEFLGK-------MISE----------------------------GVG 567
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + TYN L+ Y KA L+N+M T GL P+ +++ ++++ G ++ A I
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
L+ M E G+ PD YTT I V LK+AF +EM P+
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 180/442 (40%), Gaps = 97/442 (21%)
Query: 273 MKSRAIYEDLRSQNVTLNIY--------VFNSLMNVNAHDLKFTL--------------- 309
M+ + I+ D+ + N +N Y F + +++ LK TL
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 310 -----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
V+ M +G+ D +YN LL C N + A++I+ ++ H +GV D+
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH---RGV-SPDLI 326
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++S+++ V + AL DM ++G+ P+ + ++ LIN G++ +A+ + ++M
Sbjct: 327 SFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKM 386
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
L+ GC + N +L + A LF + T + G +GN
Sbjct: 387 LEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNM 446
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
+ ++ Q + KP TYNIL+ C T+ +
Sbjct: 447 GKALSLFGIMTQK--------------------NIKPDIVTYNILIDGFCKTTEMEKANE 486
Query: 535 LMNEMRTVGLSPNHISWTILIDA----------------------------CGG------ 560
L NEM + + PNHIS+ IL++ C
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 561 -SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG++ A + L M +G+ PD + Y T I V+ + + +AF L +M+ +QP++V
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVV 606
Query: 620 TYITLLRARSRYGSLHEVQQCL 641
TY +L R G + E + L
Sbjct: 607 TYNVILNGFCRQGRMQEAELIL 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 177/387 (45%), Gaps = 27/387 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYN 328
++++++ I+ D+ + V+ ++ F+SL+ V++ + L L +++M+ G++ D Y
Sbjct: 305 NFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYT 364
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ C G A EI K LE LDV Y+TI+ K A + ++
Sbjct: 365 ILINGYCRNGMMSEALEIRD--KMLEQG--CALDVVAYNTILNGLCKKKLLADANALFDE 420
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ GV P+ T+++LI+ G + +A+ LF M Q +P+ NIL+ + +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK- 507
++A L+ +S+ Y + N+ FV + + +D+
Sbjct: 481 MEKANELWNEM-ISRKIFPNHISYAILVNGYCNL------------GFVSEA-FRLWDEM 526
Query: 508 -RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
R KPT T N ++K C D + + +M + G+ P+ I++ LI+ +
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYM 586
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A ++ M G+ PDVV Y + R R+++A + +M I P+ TY TL
Sbjct: 587 DKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTL 646
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ Y S +++ + +M + G
Sbjct: 647 ING---YVSQDNLKEAFRFHDEMLQRG 670
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 162/373 (43%), Gaps = 61/373 (16%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E LR + ++I NSL+ V + EVY + + G+ +
Sbjct: 125 YVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELN 184
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C ++ + +E KG+ D+ TY+T++ + A
Sbjct: 185 VYTLNIMVNALCKDHKI---DDVKPFLIDMEQKGIFA-DIVTYNTLINAYCREGLLGEAF 240
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M G+ P T++++IN G +A +F EML G P++ N LL
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL--- 297
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE+C+ ++ D S+M H+
Sbjct: 298 VESCR--------------------NNNFLEAKDIFSDMLHR------------------ 319
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGS 561
P +++ L+ + + +ALM +M+T GL P+++ +TILI+ +
Sbjct: 320 ------GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + AL+I M E G + DVVAY T + + K L A +LF+EM + P+ T+
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433
Query: 622 ITLLRARSRYGSL 634
TL+ + G++
Sbjct: 434 TTLIHGHCKEGNM 446
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 19/294 (6%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+D + +++ + A+ + + G + +SL+ G V+ A +
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ E+ ++G E N NI++ A + + D + + + Q + D I+
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDV----KPFLIDMEQKGIFADIVTYNTLIN 228
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
++ + V NS KPT TYN ++ C Y R K + NE
Sbjct: 229 ---AYCREGLLGEAFEVMNSMSGK-----GLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280
Query: 539 MRTVGLSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M ++GLSP+ ++ T+L+++C + +E A I M G+SPD++++++ I V R+
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLE-AKDIFSDMLHRGVSPDLISFSSLIGVSSRNG 339
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L QA F +MK + P+ V Y L+ R G + E L + M + G
Sbjct: 340 HLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA---LEIRDKMLEQG 390
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 224 FCNF---VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAI 278
FC F + K+ ++ AL + + P++ +ID G C + K+ +
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID--GFCKTTEMEKANEL 487
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACC 335
+ ++ S+ + N + L+N +L F E ++ M + G+ + + N ++K C
Sbjct: 488 WNEMISRKIFPNHISYAILVN-GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 336 LAGNTVLAQEIYGE--------------------------------VKHLEAKGVLKLDV 363
+G+ A E G+ + +E KG L+ DV
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG-LQPDV 605
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ I+ F Q A + M+ G+ P+ T+++LIN + +++A +E
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDE 665
Query: 424 MLQAGCEPN 432
MLQ G P+
Sbjct: 666 MLQRGFVPD 674
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 194/466 (41%), Gaps = 55/466 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 230 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 340
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 341 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 457 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+EM +QPN V Y L+RA R G L L + +DM G
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKG 675
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 467 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 580
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 641 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 674
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 675 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 803
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 437
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 736
Query: 641 L 641
L
Sbjct: 737 L 737
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 53/335 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 545
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 642
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 643 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM + PN +TY ++ +R G++ E + L
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 710
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 711 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 767 TEASRLLNEMREKGIVPDS 785
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 263
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 371
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 372 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++ +R + V ++M K G
Sbjct: 336 LVKGLTR---AKRIGDAYFVLKEMTKKG 360
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 194/466 (41%), Gaps = 55/466 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 219 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 271
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 272 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 329
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 330 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 386 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 445
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 446 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 501
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 502 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 561
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 562 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 621
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+EM +QPN V Y L+RA R G L L + +DM G
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKG 664
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 456 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 569
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 570 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 629
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 630 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 663
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 664 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 702
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 703 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 762
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 763 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 792
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 370
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 426
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 427 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 486
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 725
Query: 641 L 641
L
Sbjct: 726 L 726
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 53/335 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 534
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 535 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 594
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 595 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 631
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 632 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 667
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 668 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 727
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM + PN +TY ++ +R G++ E + L
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 762
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 583 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 642
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 643 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 699
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 700 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 755
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 756 TEASRLLNEMREKGIVPDS 774
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 252
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 253 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 312
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 313 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 360
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 361 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 411
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 412 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 471
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 472 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 512
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 264
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++ +R + V ++M K G
Sbjct: 325 LVKGLTR---AKRIGDAYFVLKEMTKKG 349
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 57/323 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G ++ +YN L+ + A A +++ E++ + + D TY T++ + A
Sbjct: 406 MVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEP----DRVTYCTLIDIHA 461
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL++ + M +AG++P+T T+S +IN AG + A LF EM++ GC PN
Sbjct: 462 KAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLV 521
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D QS
Sbjct: 522 TYNIMIALQAKARNYQSALKLYR----------------------------DMQSA---- 549
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ +EM+ P+ +
Sbjct: 550 ---------------GFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYG 594
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R +L A++L + M
Sbjct: 595 LLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLEL 654
Query: 613 QIQPNLVTYITLL----RARSRY 631
+ P+L TY LL ARS Y
Sbjct: 655 GLNPSLQTYTLLLSCCTEARSPY 677
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 29/298 (9%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + AK + K+ + M+ G PN +T++ LI++ A + A+ +F
Sbjct: 379 DGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVF 438
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + GCEP+ L+ +A D A +++ + Q A G D T +
Sbjct: 439 NEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQ-----RMQAA-GLSPDTFTYSV-- 490
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNIL--MKACCTDYYRVK 533
I N H ++ K F P TYNI+ ++A +Y
Sbjct: 491 --------IINC--LGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSAL 540
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L +M++ G P+ ++++I+++ G G ++ A + M+ PD Y + +
Sbjct: 541 KLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLW 600
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +++A+ ++ M + ++PN+ T +LL A R +H++ + Q M + G
Sbjct: 601 GKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLR---VHKLADAYNLLQSMLELG 655
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L AL Y + SP+ + II+ G G + ++ +
Sbjct: 451 VTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCE 510
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q N+ +N + + A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 511 MVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGY 570
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E+K + D Y +V ++ A + A + + ML+ G+ PN
Sbjct: 571 LDEAEAVFSEMK----RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVP 626
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++A + A +L + ML+ G P+ Q +LL C EA
Sbjct: 627 TCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEA 673
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D K PN+ +I G + ++ +++
Sbjct: 383 YTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQ 442
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L F LE+Y+ MQ G+ D +Y++++ AG+
Sbjct: 443 RVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLA 502
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G + ++ TY+ ++ + A A+ +Q ALK+ DM SAG P+ +T+
Sbjct: 503 AAHKLFCE---MVEQGCVP-NLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTY 558
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +++A +F EM + P+ +L+ +A ++A++ +++
Sbjct: 559 SIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQT 615
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + + ++T ++ G + ++L M +DG P+VV Y I R+ L
Sbjct: 372 RQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYL 431
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A +F EM+ +P+ VTY TL+ ++ G L L +YQ M AG
Sbjct: 432 NDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFL---DFALEMYQRMQAAG 480
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R+ G + D YTT + + R+K+ L ++M QPN+VTY L+ + YG
Sbjct: 370 LKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHS---YG 426
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ + + V+ +M + G
Sbjct: 427 RANYLNDAVDVFNEMQRVG 445
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 179/427 (41%), Gaps = 55/427 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ TII+ I G K+ ++L +Q + + + +L+N + + +K L +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K V ++ Y+ L+ C G + G + +G+L LD TY++++
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDG---FVSDALGLCSQIGERGIL-LDAVTYNSLID 238
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL------------------ 413
WQ ++ M+ V P+ T++ LI+A G
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 414 -----------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
V +A LF M++ G EP+ N+L+ + D A LF
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ +K V Y+ D + N I++ + H S+ P
Sbjct: 359 KELC-NKNLVPTIASYNSLIDGLCN-----SGRISHVKKLLDEMHGSAQ------PPDVV 406
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNIL+ A C + ++AL + M G+ PN +++ ++D NV A I M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD++ Y I +++ + +A LF+EM+H + P++ +Y +L+ G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 635 HEVQQCL 641
VQ+ L
Sbjct: 527 PHVQELL 533
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 193/452 (42%), Gaps = 32/452 (7%)
Query: 211 IRYACIVPRADI---LFCNFVREFGKK----RDLVSALRAYDASKKHLSSPNMYICRTII 263
IRYA +P+ I F +F + K R++ A+ ++ + P + ++
Sbjct: 5 IRYA--IPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLL 62
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVM 321
G Y + +++ L+S+ ++ +I F L+N H F + + K G
Sbjct: 63 GAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ 122
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ ++N ++ C+ G A + ++L A+G L D FTY T++ + +
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDF---CQNLLAQGYL-FDQFTYGTLINGLSKNGQIKA 178
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL + ++M + V PN + +S+LI+ G V A+ L ++ + G ++ N L+
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C ++ +L +DY N + + K+ + +
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNI--LIDALCKEGRILE------AQGV 287
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KR KP TYN LM+ C+ + + + L N M GL P+ +++ +LID
Sbjct: 288 LAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYC 346
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ V+ A+ + K + + P + +Y + I S R+ L +EM P++V
Sbjct: 347 KTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVV 406
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY L+ A + G + E L V M K G
Sbjct: 407 TYNILIDALCKEGRILEA---LGVLVMMMKKG 435
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 58/426 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQK 317
++ID C G + + + + +NV + Y FN L++ + + LE V M K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI-LEAQGVLAMMSK 293
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G D+ +YN L++ C N A+E++ + K L+ DV Y+ ++ + K
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRM----VKRGLEPDVLNYNVLIDGYCKTK 349
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + +++ + + P +++SLI+ N+G + L +EM + P+ N
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 438 ILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
IL+ A C E R+ + + + G + ++ D + N N
Sbjct: 410 ILIDALCKEG-------RILEALGVLVMMMKKGV----KPNIVTYNAMMDGYCLRNNVN- 457
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
V ++ K +P YN+L+ C +A L EMR L P+ S+ L
Sbjct: 458 VAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE------ 608
ID G + ++L M + G SPDV+ Y + +++ +A SLF +
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW 576
Query: 609 -------------------------MKH---YQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+KH + PN+ TY L+ A + GS E
Sbjct: 577 PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636
Query: 641 LAVYQD 646
L+ +D
Sbjct: 637 LSKMED 642
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 149/362 (41%), Gaps = 60/362 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P + ++ID G+C G + + +++ ++ +N L++ + + L
Sbjct: 368 PTIASYNSLID--GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V M K GV ++ +YN ++ CL N +A++I+ + K L+ D+ Y+ +
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM----VKSGLEPDILNYNVL 481
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+ + ++M + P+ +++SLI+ N G + L +EM +G
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG--EDYDGNTDRISNMEHKDK 487
P+ NILL A + FD+A LFR Q+ G D+ N + N+ +K
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFR-------QIVEGIWPDFYTNHAIVDNLCKGEK 594
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
+ ++LM C SPN
Sbjct: 595 LKMAE----------------------DALKHLLMHGC-------------------SPN 613
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++TILI+A G+ A+ +L M ++ PD + + I V ++ +A L E
Sbjct: 614 VQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLRE 673
Query: 608 EM 609
EM
Sbjct: 674 EM 675
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 59/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + K R + AL + K SP ++ ++I G+C + ++ A+
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ--GLCNFSRWKEASALL 173
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLA 337
++ S N+ N+ FN L++ + K V K M ++GV D+ +YN L+ +
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V A++++ + KG K DVF+YS ++ + AK A ++ +M+ G TPN
Sbjct: 234 TEVVEARKLF---DVMITKGC-KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++++LI+ G + +A LF+ M G PN ILL + +AFRLFR
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ S Y KP
Sbjct: 350 AM---------------------------------------QSTY--------LKPNLVM 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNIL+ A C + + L +E+ +GL PN +T +I+ G ++ AL+ + M
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+DG PD +Y I+ ++ K +A L EM+
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 181/449 (40%), Gaps = 98/449 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + GK A+ +D P+ Y TII+ G+C G+ + ++
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIIN--GLCKIGETALAAGLF 103
Query: 280 EDLRSQNVTLNIYVFNSLMN-----------------VNAHDLKFTLEVYKN-------- 314
+ + LN+ +++L++ + A D+ T+ Y +
Sbjct: 104 KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNF 163
Query: 315 ------------MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
M L +M ++ ++N+L+ C G VLA E G +K + GV + D
Sbjct: 164 SRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK-VLAAE--GVLKTMTEMGV-EPD 219
Query: 363 VFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V TY++++ + + W ++ A K+ + M++ G P+ ++S LIN A +++A L
Sbjct: 220 VVTYNSLM--YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F EM+ G PN+ N L+ CQ R L + Q D
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHG---LCQLGR---------LREAQ-----------DLFK 314
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
NM N PN TY IL+ C Y KA L
Sbjct: 315 NMHTNG-----NLPNLY-------------------TYAILLDGFCKQGYLGKAFRLFRA 350
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M++ L PN + + IL++A SGN++ A ++ + G+ P+V YTT I +
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L +A F M+ P+ +Y ++R
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 170/398 (42%), Gaps = 22/398 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P + T+I+ G G + ++ +++D+ ++ + Y + +++N + +
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M++ G ++ +Y+ L+ + C A +I+ +++AK + +FTY+++++
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF---SYMKAKDI-SPTIFTYTSLIQ 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W+ A + +M S + PN +T++ L++ G V A + + M + G EP
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEHKDKQSI 490
+ N L+ + A +LF + G D + I N K K+
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLF------DVMITKGCKPDVFSYSILINGYCKAKRID 272
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
F H S P +YN L+ C + L M T G PN
Sbjct: 273 EAKQLFNEMIHQGS-------TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL 325
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ IL+D G + A ++ + M+ + P++V Y + +S LK A LF E
Sbjct: 326 YTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSE 385
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +QPN+ Y T++ + G L E + +D
Sbjct: 386 LFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 133/324 (41%), Gaps = 52/324 (16%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T + ++ F + + V + G+ P +T+++LIN G QA+ LF++M
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+P+ ++ + + A LF+ + Q+ N S + H
Sbjct: 72 VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQL--------NVVTYSTLIH 123
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
S+ S+ K PT TY L++ C + + AL+NEM ++
Sbjct: 124 ----SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI------------ 590
+ PN +++ +L+D G V A +LK M E G+ PDVV Y + +
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239
Query: 591 ---------KVC--------------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K C ++KR+ +A LF EM H PN V+Y TL+
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L E Q ++++M G
Sbjct: 300 LCQLGRLREAQD---LFKNMHTNG 320
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 180/413 (43%), Gaps = 45/413 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + C +++ + + +Y ++ + ++Y FN ++NV LK +
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV ++ +YN ++ C +G A I +K + ++ D FTY +++
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK----RQKIEPDSFTYGSLIS 299
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E+M+ G+ P+ + +++LI+ N G ++ A +EML+ G P
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A LF + + + E ++ K
Sbjct: 360 TMSTYNSLIHA------------LFMEQRTDEAECMIKE-----------IQEKGISPDA 396
Query: 492 NTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNE 538
T N + N + + + +F KPT TY L+ +A L +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G+ P+ I + LID + NV+GA ++LK M + PD V + T ++ R +
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A LF+EMK I+P+ +++ TL+ SR G +++ V +M G
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRG---DIKDAFRVRNEMLDTG 566
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 156/369 (42%), Gaps = 57/369 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G ++ I+E++ + + + ++N+L++ N +L M K G+
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M++YN L+ A + T A+ + +K ++ KG+ D TY+ ++ + +
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECM---IKEIQEKGI-SPDAITYNILINGYCRCANAK 413
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + ++ML++G+ P T++SL++ + +++A LF+++ G P+ N L+
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AF L + D D
Sbjct: 474 DGHCSNSNVKGAFELLK-------------DMD--------------------------- 493
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
R P T+N +M+ C + + L +EM+ G+ P+HIS+ LI
Sbjct: 494 -------RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+++ A ++ M + G +P V+ Y ++ +++ A L +EM + P+
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Query: 619 VTYITLLRA 627
TY TL+
Sbjct: 607 TTYFTLIEG 615
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 60/359 (16%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLF-----LKLNRTEAAWVL--YAEMFRLRIKSSVYTFN 225
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G H+E GV K ++ TY+TIV + + + A +
Sbjct: 226 IMINVLCKEGKLKKAKDFVG---HMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTT 281
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + P++ T+ SLI+ G +E+A +FEEM+Q G P++ N L+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A S Y +
Sbjct: 342 LDMA-----------------------------------------------SAYKDEMLK 354
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
PT +TYN L+ A + +A ++ E++ G+SP+ I++ ILI+ N +
Sbjct: 355 KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + M G+ P YT+ + V + R+K+A LF+++ + P+++ + L+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 169/396 (42%), Gaps = 38/396 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKF 307
++Y +I+V G K++ + + V NI +N++++ V A D
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
T M++ + D +Y L+ C G A +I+ E+ KG L+ Y+
Sbjct: 280 T-----TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ---KG-LRPSAVIYN 330
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F + MA K++ML G++P T++SLI+A ++A + +E+ +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P++ NIL+ +AF L L+ + Y T + + K++
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAF-LLHDEMLASGIKPTKKTY---TSLLHVLSKKNR 446
Query: 488 QSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA---LMNEMRTV 542
+ F K S P +N L+ C++ VK L+ +M +
Sbjct: 447 MKEAD----------DLFKKITSEGVLPDVIMFNALIDGHCSNS-NVKGAFELLKDMDRM 495
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ +++ ++ G VE A ++ M+ G+ PD +++ T I R +K A
Sbjct: 496 KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA 555
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA--RSRYGSLHE 636
F + EM P ++TY L++ +++ G L E
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++I + LI +C + ++A F M + G P + CN LL ++ + + A+ L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + ++ Y N + N+ K+ + + +FV + S KP
Sbjct: 210 AEMFRLRIKSSV---YTFNI--MINVLCKEGK-LKKAKDFVGHMETSGV------KPNIV 257
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN ++ C+ RV+A ++ M+ + P+ ++ LI G +E A +I +
Sbjct: 258 TYNTIVHGYCSSG-RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE 316
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M + G+ P V Y T I L A + +EM I P + TY +L+ A
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 153/393 (38%), Gaps = 79/393 (20%)
Query: 58 ALLSTVRRDLSSRNDY-YADMASKLAKDGRLEEFAMIVESVV------------------ 98
A+L+T++R + + Y + S + K GRLEE + I E +V
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 99 VSEGNVSKFASMLSLEMVASGIVKSIR-----------EGRIDCVVGVLKKLNELGVAPL 147
++GN+ AS EM+ GI ++ E R D ++K++ E G++P
Sbjct: 337 CNKGNLD-MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP- 394
Query: 148 ELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV 207
D + +L N R ++ + F+ E+L P K+
Sbjct: 395 ---DAITYNILINGYCRCANAKKA--FLLHDEMLASGIKPTKK----------------- 432
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+ + + KK + A + P++ + +ID G
Sbjct: 433 ---------------TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID--G 475
Query: 268 ICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMAD 323
C + A + +D+ V + FN++M + + K E++ M++ G+ D
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
S+N L+ G+ A + E+ V TY+ +V+ + +A
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEM----LDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
++ ++M+S G+TP+ T+ +LI A + ++
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|299471432|emb|CBN79384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 60/394 (15%)
Query: 237 LVSALRAYDASKKHLSSPNM-YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
+V A R + AS++ Y+ +I G G++ + A+ ++ + V N+Y++N
Sbjct: 4 VVPASRLHQASQRQTEQKQKDYL--HLIKAAGFRGNWREVAALVSEMGGKGVEGNVYIYN 61
Query: 296 SLMNVNAH-----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ + A + + L V +++ + D SYN + G+ A+ + G +
Sbjct: 62 TAIAAMARCGRPREAEALLTVM--LERDSIAPDTISYNSAINGHARCGDLDAARRLLGRM 119
Query: 351 KHLEAKG-VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L + G +L D FTY+ + A A +V + M AGVTPN IT++S + AC
Sbjct: 120 TELASGGALLHPDQFTYNAVANAAAKRGDAVAAAEVLKMMAEAGVTPNIITYNSCLAACK 179
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G + +A+ L E M + G +P+ RS++ + +
Sbjct: 180 AKGDLRRAVVLLEIMREDGIDPDQ-----------------------RSYSAAIATAGIR 216
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
++ + M +D P T T+N +KA +
Sbjct: 217 GLWEEVQGFLETMREED------------------------LTPDTVTFNTAIKAVADNG 252
Query: 530 Y--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+L+ EM+ GL+P+ IS+ ++ ACG +G + AL++L+ MR+ G++P+ Y+
Sbjct: 253 QCDVAFSLLAEMKNEGLTPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYS 312
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
A+ C ++ R ++A +L M+ ++ + Y
Sbjct: 313 AAMDACGKAGRQREALALLGHMRKAGVRADTACY 346
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 14/277 (5%)
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCC 436
W ++A V E M GV N +++ I A A G +A L ML+ P++
Sbjct: 38 WREVAALVSE-MGGKGVEGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISY 96
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N + D A RL T + AL + ++N K ++
Sbjct: 97 NSAINGHARCGDLDAARRLLGRMTELASGGALLHPDQFTYNAVANAAAKRGDAVAA---- 152
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTIL 554
+ P TYN + AC D R L+ MR G+ P+ S++
Sbjct: 153 ---AEVLKMMAEAGVTPNIITYNSCLAACKAKGDLRRAVVLLEIMREDGIDPDQRSYSAA 209
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G G E L+ MRE+ ++PD V + TAIK + + AFSL EMK+ +
Sbjct: 210 IATAGIRGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEMKNEGL 269
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P+ ++Y +L A G+ E + L + +DM +AG
Sbjct: 270 TPDQISYNGVLGA---CGNAGEWKAALRLLEDMRQAG 303
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D V+A + +PN+ + + C GD ++ + E +R + +
Sbjct: 145 KRGDAVAAAEVLKMMAEAGVTPNIITYNSCLAACKAKGDLRRAVVLLEIMREDGIDPDQR 204
Query: 293 VFNS-LMNVNAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+++ + L ++ + + M++ + D ++N +KA G +A + E+
Sbjct: 205 SYSAAIATAGIRGLWEEVQGFLETMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEM 264
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K+ +G L D +Y+ ++ +A W+ AL++ EDM AGVTPN +S+ ++AC
Sbjct: 265 KN---EG-LTPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYSAAMDACGK 320
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
AG +A+ L M +AG ++ C N + AC A + A +L + L
Sbjct: 321 AGRQREALALLGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQEMKL 371
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 136/367 (37%), Gaps = 95/367 (25%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P+ ++ CG G++ + + ED+R VT N Y +++ M+ A + L
Sbjct: 270 TPDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYSAAMDACGKAGRQREALA 329
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M+K GV AD A YN + AC +A + A ++ E+K A T
Sbjct: 330 LLGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQEMKLGVAGAASGGAPGGGGTA- 388
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM------------ 418
+ P+ ++++S I ACA A V++A+
Sbjct: 389 ------------------GVEVAPPPDVVSYASAITACARARRVDEALGLLSELRVNEAQ 430
Query: 419 -------------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
L +EM+ AG PN C+ ++ A + +RA L R
Sbjct: 431 AAAAAAGDVACGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMRRL------ 484
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
SH F+P+ TY ++
Sbjct: 485 ---------------------------------QSH--------GFEPSLYTYETIVWGF 503
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ A+ + + +GL P+ SW I AC +G+ E AL +L MR+ G+ P
Sbjct: 504 AKEANWAAAVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHWERALALLADMRKQGIRPSK 563
Query: 584 VAYTTAI 590
V YT A+
Sbjct: 564 VTYTAAV 570
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R ALM +++ G P+ ++ ++ N A++ L + G+ P V ++ AI
Sbjct: 476 RAVALMRRLQSHGFEPSLYTYETIVWGFAKEANWAAAVRFLAYVLGLGLQPSVRSWDAAI 535
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA--RSRY 631
C ++ ++A +L +M+ I+P+ VTY + R RY
Sbjct: 536 AACSQAGHWERALALLADMRKQGIRPSKVTYTAAVVGINRRRY 578
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM GL PN I ++ A G E A+ +++ ++ G P + Y T +
Sbjct: 445 LLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMRRLQSHGFEPSLYTYETIVWGFA 504
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A + +QP++ ++ + A S+ G ++ LA+ DM K G
Sbjct: 505 KEANWAAAVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHW---ERALALLADMRKQG 558
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 43/364 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M G A+ NI++ C
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + ++ + G D +Y+T++K A+ W+ A ++ ++M+
Sbjct: 332 KQGRV---DDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA L E+M + GCE N N L+ CV+ + D A
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG-RVDSALE 446
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF S T++ T + G E D + ++ M KD
Sbjct: 447 LFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD------------------- 487
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C +A L+ +M G +PN I++ L+D N
Sbjct: 488 -----CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCN 542
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + +G+SPD+V Y++ I V R R+++A +F ++ ++P V Y
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 624 LLRA 627
+L A
Sbjct: 603 ILLA 606
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 183/417 (43%), Gaps = 48/417 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 130 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 244
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 245 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCP-----PNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 419 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 37/411 (9%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
VC G + ++ + +++R++ T NI +N ++N + + E + G
Sbjct: 190 VCKSTG-FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SY +LK C A +E++ E+ K + +V T+ +V+ F + A
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMME---KNCMPNEV-TFDMLVRFFCRGGMVERA 304
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++V E M G NT + +IN G V+ A M GC P++ +L+
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 443 CVEACQFDRAFRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
A +++ A L F ++ Q L E +++S EH +
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS--EHGCE 422
Query: 488 QSITNTPNFVPNSHY------SSFDKRFSF--KPTTTTYNILMKACCTDYYRVKA---LM 536
+I T N + N S+ + +S KP T TY L+ C + R+ A L+
Sbjct: 423 VNIV-TYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC-NAERLDAAAELL 480
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +PN +++ +L+ G ++ A+++++ M E G +P+++ Y T +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITND 540
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++A L + + P++VTY +++ SR + E + + QD+
Sbjct: 541 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C T + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L + G PD V+YTT +K +KR + LF EM PN VT+ L+R
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 296
Query: 630 RYGSLHEVQQCL 641
R G + Q L
Sbjct: 297 RGGMVERAIQVL 308
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 107/557 (19%), Positives = 211/557 (37%), Gaps = 118/557 (21%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 183 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 239 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 283
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 284 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 453 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A+ L E+M++ GC PN N LL C + A L
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGL--------------- 553
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+SN P TY+ ++ + +A
Sbjct: 554 ----VSN----------------------------GVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + ++ +G+ P + + ++ A N +GA+ M +G P+ + Y T I+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 593 CVRSKRLKQAFSLFEEM 609
LK+ L E+
Sbjct: 642 LANEDFLKETRDLLREL 658
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY +++ C D RV +L+++M G P+ +++T+L++A S A++
Sbjct: 143 PDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L MR G +P++V Y I R R+ A + Y QP+ V+Y T+L+
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261
Query: 630 RYGSLHEVQQCLA 642
+V++ A
Sbjct: 262 AAKRWEDVEELFA 274
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 116 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 638 QQCL 641
++ L
Sbjct: 235 REFL 238
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C AI + +RS V ++ ++ LM+ + + +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y LL+ G V E++G + + G+ D + +S ++ +A A
Sbjct: 335 EITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYAKQGKVDQA 390
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+++RA L + + L + + I + K+ + I + F
Sbjct: 451 LCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF------ 499
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 -ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 621 YITLLRA 627
Y +L
Sbjct: 619 YNIILHG 625
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 70/420 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 183/415 (44%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
>gi|242050202|ref|XP_002462845.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
gi|241926222|gb|EER99366.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
Length = 798
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 30/437 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G+ G+ ++
Sbjct: 182 PKLVVTYNTLIDLYGKAGRLKNALDMFLDMPAHGVMPDTYTFNTLINIFGLSGNSAQAEV 241
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y + K + D SY ILL+ C
Sbjct: 242 LFASMMVRGVKPDTKTYNVMMTVFASIGDLERVLKYYYQIGKACLHPDAVSYRILLQLLC 301
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+A E+ ++ + + G + + ++K++ D A+ E G
Sbjct: 302 ---ERKMAHEVEDLIEGILSSGC-SVHEQSLPIVMKMYVDLGLLDEAIAFFERHCR-GKG 356
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
++ +S++++A A GL E+A H+F G E + N++++A +A Q+DR L
Sbjct: 357 ISSKNFSAIMDAFAEKGLWEEAEHIFCSERGVGNEKDIVEYNVMIKAYGQAKQYDRVSSL 416
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
S + ++ V+ E Y+ S H+ K+ + K F+
Sbjct: 417 LES--MEESGVSSDECTYNSLIQMFSVGGFPHRAKKLLGKM-------------KDAGFE 461
Query: 513 PTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY+ ++++ C L NEM+T G+ PN I + ILID +GNV+ AL
Sbjct: 462 PKCETYSAIIRSYSCHCLVPEAIDLFNEMKTSGVEPNVIVYGILIDMFAETGNVKEALHY 521
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ + G+SP+ + T+ IK + K+A L+ M P+++ +L +
Sbjct: 522 SNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML---NL 578
Query: 631 YGSLHEVQQCLAVYQDM 647
Y L V + +++ +
Sbjct: 579 YAKLEMVTEAKEIFESL 595
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 17/345 (4%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y M ++GV+ + + + C G ++ Y ++ + +KG + D TYS ++
Sbjct: 75 YNEMLEMGVVLNKVNVCNFTRCLCCIGKF---EKAYNVIREMMSKGFIP-DSSTYSKVIG 130
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A ++ ++M G+TP+ T+++L++ GL+EQA + F+EM Q GC P
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNME 483
N L+ A ++ + RA +F ++ T + G G T++ +
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMNEMRT 541
+ K + P+ + ++ D +P TY L+ C + + L+ M
Sbjct: 251 ARMKNDKVDIPDV--DIYFRIVDSELK-EPNVVTYGALVDGLCKAHKVKEARDLLETMSL 307
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I + LID G ++ A ++ M G SP+V Y++ I + KRL
Sbjct: 308 EGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDL 367
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A + +M PN+V Y ++ + G E + + + ++
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 177/453 (39%), Gaps = 82/453 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R L A ++ + PN+ +ID G+ K+ IY
Sbjct: 193 VTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYAR 252
Query: 282 LRSQNVTL-----------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
+++ V + N+ + +L++ AH +K ++ + M G
Sbjct: 253 MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEP 312
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQM 381
+ Y+ L+ C G AQE++ + + G +V+TYS+++ K+F D K +
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTK---MLGHGC-SPNVYTYSSLIDKLFKD-KRLDL 367
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
ALKV ML PN + ++ +++ G ++A L M + GC PN ++
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMID 427
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + DR L + T S PNF+
Sbjct: 428 GFGKAGRVDRCLELLQLMT----------------------------SKGCAPNFI---- 455
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS-WTILIDAC 558
TY +L+ CC A L+ EM+ P HI + +I+
Sbjct: 456 ---------------TYRVLINHCCAAGLLDDAHKLLEEMKQT-YWPKHIGMYRKVIE-- 497
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G S +L +L + EDG P + Y I +++ RL+ A L EE+ +
Sbjct: 498 GFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ- 556
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY++L+ + + +V + +Y DM + G
Sbjct: 557 NTYVSLIESLTL---ACKVDKAFKLYSDMTRRG 586
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+GE E + ++ ++ + ++D FRIV + +P+V + Y +V C
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV---VTYGALVDG----LCK- 291
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + RDL+ + PN I +ID G C G +++ ++ +
Sbjct: 292 AHKVKEARDLLETMSLEGCE------PNQIIYDALID--GFCKVGKLDEAQEVFTKMLGH 343
Query: 286 NVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N+Y ++SL++ D L L+V M + ++ Y ++ C G T
Sbjct: 344 GCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT--- 400
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
E Y + +E KG +V TY+ ++ F A L++ + M S G PN IT+
Sbjct: 401 DEAYRLMLMMEEKGCYP-NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459
Query: 404 LINACANAGLVEQAMHLFEEMLQ 426
LIN C AGL++ A L EEM Q
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQ 482
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 173/406 (42%), Gaps = 26/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C +G E Y E+K + LK +V +YST+
Sbjct: 189 YFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMK----QSGLKPNVVSYSTL 244
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G PN T++SL++A G + A L EML+ G
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A +LF + L Y+ ++ D+
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS-YNALIHGFVKAKNMDRAL 363
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ N K +P Y + C K +MNEM+ G+
Sbjct: 364 ELLNEL------------KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKA 411
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L+ M+E VV + I ++K + +A F
Sbjct: 412 NTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYF 471
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M + + +QPN Y ++ + ++V+ +++ M + G
Sbjct: 472 GRMSNDFGLQPNAAVYTAMIDGLCKE---NQVKAATTLFEQMAQEG 514
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 190/437 (43%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++S + ++
Sbjct: 145 KEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N + L LE Y+ M++ G+ ++ SY+ L+ A C A + Y ++
Sbjct: 205 TYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDM 264
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G + + FTY+++V A ++ +ML GV N +T+++LI+ +
Sbjct: 265 RRV---GHVP-NEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M+ AG PN N L+ V+A DRA L
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLL 380
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + + + + + N H +
Sbjct: 381 YGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQ 440
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMR---TVGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ R GL PN +T +ID V
Sbjct: 441 ELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQV 500
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + + M ++G+ PD AYT+ + ++ + +A +L ++M ++ +L+ Y +L
Sbjct: 501 KAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSL 560
Query: 625 LRARSRYGSLHEVQQCL 641
+ S+ L + + L
Sbjct: 561 VWGFSQCNQLQKARSFL 577
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 180/421 (42%), Gaps = 56/421 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V F K+ + A++ Y ++ PN + +++D G+ + + +
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V N+ + +L++ +A +K +++ M GV+ ++ASYN L+ A N
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+ E+K +G+ + D+ Y T + + + A V +M G+ NT+
Sbjct: 359 MDRALELLNELK---GRGI-QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++L++A +G + +HL EEM + E +L+ L ++
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDG------------LCKNK 462
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+SK DY G R+SN F +P Y
Sbjct: 463 LVSKAI-----DYFG---RMSN--------------------------DFGLQPNAAVYT 488
Query: 520 ILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + +VKA L +M GL P+ ++T L+D GN+ AL + M E
Sbjct: 489 AMIDGLCKE-NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE 547
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
GM D++AYT+ + + +L++A S EEM +I P+ V I +L+ G + E
Sbjct: 548 IGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDE 607
Query: 637 V 637
Sbjct: 608 A 608
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 176/432 (40%), Gaps = 86/432 (19%)
Query: 202 VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRT 261
+N+ N I CIV A ILFC A YDA+ I R
Sbjct: 1 MNRNGFNHTIESYCIV--AHILFC--------------ARMYYDANS---------ILRE 35
Query: 262 IIDVCGICGDYMKSRAIYEDLRS-QNVTLNIY-VFNSLMNV--NAHDLKFTLEVYKNMQK 317
I+ + ++ ++++L S +NV + + VF++L +V + L+ + + M++
Sbjct: 36 IV----LSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKR 91
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
V S N LL G T + + K + G K VFTY+ ++
Sbjct: 92 FRVFPKTRSCNGLLHKFAKLGKTDGVKRFF---KDMIGAGS-KPTVFTYNIMIDCMWKEG 147
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A + E+M G+ P+T+T++S+I+ G ++ ++ FEEM CEP+ N
Sbjct: 148 DIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYN 207
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
L+ ++ + + +R
Sbjct: 208 SLINCFCKSGKLPKGLEFYREM-------------------------------------- 229
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
K+ KP +Y+ L+ A C + +A+ +MR VG PN ++T L+
Sbjct: 230 ---------KQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA GN+ A ++ M E G+ +VV YT I ++R+K+A LF +M +
Sbjct: 281 DANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI 340
Query: 616 PNLVTYITLLRA 627
PNL +Y L+
Sbjct: 341 PNLASYNALIHG 352
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 507 KRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KRF P T + N L+ K TD VK +M G P ++ I+ID G
Sbjct: 90 KRFRVFPKTRSCNGLLHKFAKLGKTD--GVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEG 147
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++E A + + M+ G+ PD V Y + I + RL FEEMK +P+++TY
Sbjct: 148 DIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYN 207
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ + G L + L Y++M ++G
Sbjct: 208 SLINCFCKSGKL---PKGLEFYREMKQSG 233
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 261 TIIDVC----GICGDYMKSRAI-YEDLRSQNVTL--NIYVFNSLMN--VNAHDLKFTLEV 311
T++ C G+C + + S+AI Y S + L N V+ ++++ + +K +
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G++ D +Y L+ GN + A + ++ + +KLD+ Y+++V
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG----MKLDLLAYTSLVW 562
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
F+ Q A E+M+ + P+ + ++ G +++A+ L
Sbjct: 563 GFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M+ + P S L+ G +G + K M G P V Y I +
Sbjct: 86 FSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWK 145
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
++ A LFEEMK + P+ VTY +++ + G L +
Sbjct: 146 EGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 161/367 (43%), Gaps = 37/367 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + ++ G + D+ +YN+L+ C G G L + + DV TY+TI+
Sbjct: 167 VMEILEDSGAVPDVITYNVLISGYCKTGEI-------GSALQLLDRMSVSPDVVTYNTIL 219
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D+ + A++V + + P+ IT++ LI A V QAM L +EM GC+
Sbjct: 220 RTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCK 279
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGEDYDGNTD 477
P+ N+L+ + + D A R + ++ + G D
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK- 338
Query: 478 RISNMEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACC 526
++ M K T N + N +K + P + +YN L+ A C
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALC 398
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
D +A+ ++ M + G P+ +++ L+ A G V+ A++IL + G SP ++
Sbjct: 399 KDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLI 458
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T I + + A L +EMK ++P+++TY TL+ SR G +V + +A +
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG---KVDEAIAFF 515
Query: 645 QDMWKAG 651
D+ + G
Sbjct: 516 HDLEEMG 522
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + H+ + G + +V T++
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRL---DEAIRFLNHMPSYGC-QPNVITHNI 322
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K +M+ G +P+ +T++ LIN GL+ +A+ + E+M Q G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL A + + +RA +E+ D
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERA-----------------------------IEYLDI- 412
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
V Y P TYN L+ A C D A ++N++ + G SP
Sbjct: 413 -------MVSRGCY----------PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G + A+++L M+ G+ PD++ Y+T + R ++ +A + F
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ ++PN +TY +++
Sbjct: 516 HDLEEMGVKPNAITYNSIM 534
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 31/275 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ I C R D I F N + +G + R + S R DA K
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINF--LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
D K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLGSKGC 453
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+K+ ++M G+ P+ IT+S+L+ + G V++A+
Sbjct: 454 SPV-LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
F ++ + G +PN+ N ++ +A Q RA
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 55/364 (15%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ L A+R + + PN+ I+ G +M + ++ + + ++
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN L+N + ++V + M + G + SYN LL A C A E Y ++
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE-YLDI 412
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ ++G D+ TY+T++ +A+++ + S G +P IT++++I+ +
Sbjct: 413 --MVSRGCYP-DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + A+ L +EM G +P+ + L+ + D A F
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL----------- 518
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ KP TYN +M C
Sbjct: 519 ------------------------------------EEMGVKPNAITYNSIMLGLCKARQ 542
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
V+A+ + M G P S+ ILI+ G + AL++L + G+ A
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 589 AIKV 592
+K+
Sbjct: 603 VVKI 606
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
++ +M + G P+ I++ +LI +G + ALQ+L M +SPDVV Y T
Sbjct: 162 WKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTI 218
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ S +LK+A + + + P+++TY L+ A + + + + L +D
Sbjct: 219 LRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 206/496 (41%), Gaps = 90/496 (18%)
Query: 225 CNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CNF+ EF + D V + A ++ +K + ++ TI I G + + +R
Sbjct: 125 CNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LN Y +N L++ + + LEVY+ M G+ + +Y+ L+ A G
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKKR 241
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ + +K +E G L+ +V+T++ ++V A A ++ M G P+ +T+
Sbjct: 242 DSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--- 458
+ LI+A NAG +E A LF +M G +P+ LL + D F+ F S
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD-TFKEFWSQME 359
Query: 459 ----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD- 506
+T+ + D+D + + + KQ I +PN H Y++
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFD---EAFATFDVMRKQGI------LPNLHTYNTLIC 410
Query: 507 ------------------KRFSFKPTTTTYNILMK------------------------- 523
+ +PT TYNI +
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVP 470
Query: 524 ---ACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
AC Y + K + N +R GL+P+ +++ +++ G V+ A+ +L
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M +G PDV+ + I ++ R+ +A+ +F+ MK ++ P +VTY TLL +
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 632 GSLHEVQQCLAVYQDM 647
G VQ+ + +++ M
Sbjct: 591 G---RVQKAIELFESM 603
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 56/344 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++K+M+ +G D ++N+LL +G E+Y E+ K D TY+ +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP----DAITYNIV 864
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + AL D++S+ P T+ LI+ A G +E+AM LFEEM GC
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN NIL+ + + A +LF+ R+ N
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFK--------------------RMVNE------- 957
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+P +Y IL+ C +AL NE+++ GL P+
Sbjct: 958 --------------------GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +I+ G S +E AL + MR G+ PD+ Y + + + ++QA ++E
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
E++ ++P++ TY L+R Y + VY++M G
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG---YSLSENPEHAYTVYKNMMVDG 1098
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 23/292 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + + + A + +DM + G P+ T++ L+ +G + + L++EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
+ C+P++ NI++ + ++ D+A F S T G DG ++
Sbjct: 850 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG-LAKVGR 908
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+E + F S Y KP +NIL+ D L M
Sbjct: 909 LEEAMRL-------FEEMSDYGC-------KPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL+D +G V+ AL ++ G+ PD +AY I +S+R+
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A +L+ EM++ I P+L TY +L+ G V+Q +Y+++ AG
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM---VEQAKRMYEELQLAG 1063
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 168/417 (40%), Gaps = 87/417 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F V K RD A +D +K PN++ T+I CG+
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGL------------- 412
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ A ++ L++ M+ +GV +YNI + +G T
Sbjct: 413 ------------------LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETG 454
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E + ++K AKG++ ++ + + A+ + A + + G+ P+++T+
Sbjct: 455 KAVETFEKMK---AKGIVP-NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ + G V++A++L EM++ GCEP+ N L+ + +A + D A+++F
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF----- 565
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
DR+ +M+ PT TYN L
Sbjct: 566 ---------------DRMKDMK---------------------------LSPTVVTYNTL 583
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + KA L M SPN IS+ L+D + VE AL++ M
Sbjct: 584 LSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDV+ Y T I ++ ++ AF F ++K + P+ VT TLL + G + +
Sbjct: 644 KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGD 699
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 47/459 (10%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ L C +R G+ D AL+ + P Y ID G G+ K+ +E
Sbjct: 406 NTLICGLLRA-GRIED---ALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFE 461
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ + NI N+ + A L+ ++ +++ G+ D +YN+++K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA----KWWQMALKVKEDMLSAGV 394
A + E+ + + DV ++++ A + WQM ++K+ LS
Sbjct: 522 QVDEAVNLLSEM----IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS--- 574
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +T+++L++ G V++A+ LFE M++ C PN+ N LL + + + A +
Sbjct: 575 -PTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALK 633
Query: 455 LFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVP 498
+F T L+ V G + + H+ K+S+ T P V
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVK 693
Query: 499 NSHYS-------SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHI 549
F + F+ + + LM + KA++ E+ G+
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753
Query: 550 SWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
L+ A QI K ++ G+SP + +Y I + ++A+ LF++
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK+ P+ T+ LL + G + E+ +Y++M
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITEL---FELYKEM 849
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + +GK D +A + + P++ ++D + G ++ + +L
Sbjct: 930 IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + +N ++N + ++ L +Y M+ G++ D+ +YN L+ LAG
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ +Y E L+ G L+ DVFTY+ +++ ++ ++ + A V ++M+ G PN T
Sbjct: 1050 EQAKRMYEE---LQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 401 WSSLIN 406
++ L N
Sbjct: 1106 YAQLPN 1111
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 179/394 (45%), Gaps = 23/394 (5%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + G+ K +++ L+ + ++ + L+N+ K + L++ K M
Sbjct: 416 IYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMM 475
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ + K LK DV Y+ I+ F
Sbjct: 476 KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF----TKDGLKPDVVLYNNIITAFCG 531
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + + M P T T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 532 MSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 591
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE + +A + ++ G + + S+ +T
Sbjct: 592 YNALILGLVEKRKMAKAVAILDQMNVAGV---------GPNEHTYTTLMQGYASLGDTEK 642
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTI 553
Y S + + TY L+K+CC AL EM + N + I
Sbjct: 643 AF---QYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 699
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G+V A +++ MR++G+ PD+ YT+ + C ++ +++A + +EM+ +
Sbjct: 700 LIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFG 759
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I+PNL TY TL+ +R S+ E + L+ +++M
Sbjct: 760 IKPNLKTYTTLINGWAR-ASMPE--KALSCFEEM 790
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 187/444 (42%), Gaps = 69/444 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD +R +E ++++ + + +V++SL++ A D++ L + M++ G+ + +Y
Sbjct: 288 GDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY 347
Query: 328 NILLKACCLAGNTVLAQEIYGE--------------------------------VKHLEA 355
+I++ G A + E V+ +E
Sbjct: 348 SIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEV 407
Query: 356 KGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +D+ Y T++ + + L V + + G +P+ I++ LIN G V
Sbjct: 408 QGIDAPIDI--YHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKV 465
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY 472
+A+ + + M +G + N + ++L+ ++ + AF +F +T K V L +
Sbjct: 466 SKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNI 525
Query: 473 D------GNTDR----ISNMEHKDKQSITNTPNFVPNSHYSS-----------FD--KRF 509
N DR + M+ + + T T F+P H + FD +R
Sbjct: 526 ITAFCGMSNMDRAICMVKQMQKERYRPTTRT--FLPIIHGFARAGEMRRALEIFDMMRRS 583
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT TYN L+ KA ++++M G+ PN ++T L+ G+ E A
Sbjct: 584 GCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Q ++R +G+ DV Y +K C +S R++ A ++ +EM I N Y L+
Sbjct: 644 FQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDG 703
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G + E + Q M K G
Sbjct: 704 WARRGDVWEAADLM---QQMRKEG 724
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D PN + T++ GD K+ + LR++ + +++Y
Sbjct: 601 EKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVY 660
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V K M + + YNIL+ G+ A ++ +
Sbjct: 661 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADL---M 717
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GVL D+ TY++ V A Q A ++ ++M + G+ PN T+++LIN A
Sbjct: 718 QQMRKEGVLP-DIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWAR 776
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A + E+A+ FEEM A +P+ + L+ + + F +++
Sbjct: 777 ASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSY 819
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + F + ++ AL +D ++ P ++ +I K+ AI + +
Sbjct: 557 FLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMN 616
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + + +LM A D + + + ++ G+ D+ +Y LLK+CC +G
Sbjct: 617 VAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRM- 675
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTIT 400
Q K + AK + + + F Y+ ++ +A W+ A + + M GV P+ T
Sbjct: 676 --QSALAVTKEMSAKNIPR-NTFVYNILIDGWARRGDVWEAA-DLMQQMRKEGVLPDIHT 731
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S +NAC AG +++A + +EM G +PN + L+ A ++A F
Sbjct: 732 YTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMK 791
Query: 461 LSK 463
L++
Sbjct: 792 LAE 794
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N + F ++ A+ +K P II G+ ++ I++
Sbjct: 520 VLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDM 579
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ +N+L+ V + + + M GV + +Y L++ G+
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A + + +++ +G L++DV+TY ++K + Q AL V ++M + + NT
Sbjct: 640 TEKAFQYFSVLRN---EG-LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF 695
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ LI+ A G V +A L ++M + G P+ + AC +A +A + +
Sbjct: 696 VYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQ 753
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 38/441 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G G+ ++
Sbjct: 261 PKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEV 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y ++ G+ D +Y ILL+ C
Sbjct: 321 LFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLC 380
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS----TIVKVFADAKWWQMALKVKEDMLS 391
A+++ +G+LK F + ++K++ D A+ E
Sbjct: 381 ERKMVHKAEDVI--------EGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCR 432
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G ++ +S++++ A GL E+A H+F G E + N++++A +A Q+DR
Sbjct: 433 -GKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDR 491
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + ++ V E Y+ S H+ K+ + K
Sbjct: 492 VSSLFES--MEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKM-------------KD 536
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+P TY+ ++++ +A L NEM+ G+ PN I + ILID +GNV+
Sbjct: 537 AGFEPKCETYSAIIRSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKE 596
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL ++ + G+SP+ + T+ IK + K+A L+ M P+++ +L
Sbjct: 597 ALHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML- 655
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
+ Y L V + ++ +
Sbjct: 656 --NLYAKLEMVTEAKEIFDSL 674
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 57/375 (15%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+R+Q + L V N ++ V A +++ V+ M GV D +Y ++ C G
Sbjct: 199 DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 258
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A E+ +G + +D T + I+ F + A+ + G++PN
Sbjct: 259 NVLEADRWICEMME---RGFV-VDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNL 314
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I +SS+I+ G V+QA L EEM++ G +PN L+ + +RAFRLF
Sbjct: 315 INYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF-- 372
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + N+ PN H TY
Sbjct: 373 -----------------------------LKLIRSDNYKPNVH---------------TY 388
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + R + L M+ GL PN ++T LID +GN A +++++M
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G P+ Y + + + R ++AF L QI+ + VTY L+ + + +
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRA---D 505
Query: 637 VQQCLAVYQDMWKAG 651
+ Q L M+K G
Sbjct: 506 MNQALVFLNKMFKVG 520
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 21/366 (5%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ C + +RA+ + + ++ N+ ++S+++ +K E+ + M K G
Sbjct: 286 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 345
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ ++ L+ C G T A ++ +K + + K +V TY+ ++ + +
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLF--LKLIRSDNY-KPNVHTYTAMISGYCKEEKLS 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M G+ PNT T+++LI+ AG +A L E M G PN+ N ++
Sbjct: 403 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + AF+L + ++ + DG T I E + + F+ N
Sbjct: 463 DGLCKRGRAEEAFKLLNTGFQNQIEA------DGVTYTILISEQCKRADMNQALVFL-NK 515
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ + F+P Y L+ A C + L +E+ +GL+P ++T +I
Sbjct: 516 MF-----KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 570
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A++ + M + G +PD ++Y I + RL +A L++ M + P
Sbjct: 571 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCE 630
Query: 619 VTYITL 624
VT +TL
Sbjct: 631 VTRVTL 636
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN++ +I G C + SRA ++E ++ Q + N + +L++ A +
Sbjct: 383 PNVHTYTAMIS--GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY--GEVKHLEAKGV--------- 358
E+ + M G + +YN ++ C G A ++ G +EA GV
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500
Query: 359 --------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ D+ Y+T++ F + + K+ ++++ G+ P
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++S+I V A+ F++M GC P+S L+ + + D A +L+
Sbjct: 561 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 618
>gi|414886512|tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 38/441 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P+ + + + +GK L +AL + H P+ Y T+I++ G G+ ++
Sbjct: 261 PKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEV 320
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + V + +N +M V A DL+ L+ Y ++ G+ D +Y ILL+ C
Sbjct: 321 LFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLC 380
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS----TIVKVFADAKWWQMALKVKEDMLS 391
A+++ +G+LK F + ++K++ D A+ E
Sbjct: 381 ERKMVHKAEDVI--------EGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCR 432
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G ++ +S++++ A GL E+A H+F G E + N++++A +A Q+DR
Sbjct: 433 -GKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDR 491
Query: 452 AFRLFRSWTLSKTQVALGE-DYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKR 508
LF S + ++ V E Y+ S H+ K+ + K
Sbjct: 492 VSSLFES--MEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKM-------------KD 536
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+P TY+ ++++ +A L NEM+ G+ PN I + ILID +GNV+
Sbjct: 537 AGFEPKCETYSAIIRSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKE 596
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL ++ + G+SP+ + T+ IK + K+A L+ M P+++ +L
Sbjct: 597 ALHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAML- 655
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
+ Y L V + ++ +
Sbjct: 656 --NLYAKLEMVTEAKEIFDSL 674
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 182/409 (44%), Gaps = 45/409 (11%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T+++ + G+ K +++ L+ ++ + L+N+ K + LEV K M
Sbjct: 415 IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMM 474
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ G+ +M +Y++L+ + A ++ +V K LK DV Y+ I+K F
Sbjct: 475 ESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV----IKDGLKPDVVLYNNIIKAFCG 530
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 531 MGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 590
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ VE Q ++A + L+ +S EH T
Sbjct: 591 FNALVLGLVEKRQMEKAVEILDEMALAG---------------VSPDEH--------TYT 627
Query: 496 FVPNSHYSSFDKRFSFKPTTT-----------TYNILMKACCTDYYRVKAL--MNEMRTV 542
+ N + + D +F+ T TY L+KACC AL EM
Sbjct: 628 TIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQ 687
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ N + ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A
Sbjct: 688 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRA 747
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+EM+ ++PN+ TY TL+ + SL E + L +++M AG
Sbjct: 748 TKTIQEMEALGVKPNVKTYTTLIHGWA-CASLPE--KALRCFEEMKLAG 793
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 182/413 (44%), Gaps = 36/413 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASY 327
GD ++R +E +R + + + +V+ SL++ A D++ L + M++ GV + +Y
Sbjct: 316 GDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTY 375
Query: 328 NILLKACCLAGNTVLA---QEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMAL 383
+I++ GN + V+ +E +G+ +D+ Y T++ + + L
Sbjct: 376 SIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDI--YHTMMNGYTMIGNEEKCL 433
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
V + + G P+ I++ LIN G V +A+ + + M AG + N + ++L+
Sbjct: 434 IVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGF 493
Query: 444 VEACQFDRAFRLFRSWTLS--KTQVALGEDYD------GNTDRISNM--EHKDKQSITNT 493
++ + AF +F K V L + GN DR +M E + K+ +
Sbjct: 494 LKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTS 553
Query: 494 PNFVPNSHYSS-----------FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
F+P H + FD +R PT T+N L+ KA +++E
Sbjct: 554 RTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDE 613
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+SP+ ++T +++ G+ A + +R +G+ DV Y +K C +S R
Sbjct: 614 MALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 673
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A ++ EM I N Y L+ +R G + E + Q M + G
Sbjct: 674 MQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLM---QQMKQEG 723
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 131 CVVGVLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLE 182
C++ V K+L E G AP + ++ G E ++++S ++ + +L
Sbjct: 432 CLI-VFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLI 490
Query: 183 EFRLPVKELDEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
L +K+ F + + + KPDV +L+ N ++ F ++
Sbjct: 491 NGFLKLKDWTNAFTVFEDVIKDGLKPDV--------------VLYNNIIKAFCGMGNMDR 536
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ +K P II G+ ++ I++ +R ++ FN+L+
Sbjct: 537 AIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVL 596
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V ++ +E+ M GV D +Y ++ G+T A E + ++++ +G
Sbjct: 597 GLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRN---EG 653
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+LDVFTY ++K + Q AL V +M + + NT ++ LI+ A G V +A
Sbjct: 654 -LELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEA 712
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
L ++M Q G +P+ + AC +A RA
Sbjct: 713 ADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRA 747
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SP+ + TI++ GD K+ + LR++ + L+++
Sbjct: 600 EKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVF 659
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V + M + + YNIL+ G+ A ++ ++
Sbjct: 660 TYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 719
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +GV + D+ TY++ + A A K ++M + GV PN T+++LI+ A
Sbjct: 720 KQ---EGV-QPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWAC 775
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ FEEM AG +P+ + L+ + + A+
Sbjct: 776 ASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAY 818
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
++ A G + +A FE M G P+S L+ A + A R
Sbjct: 308 MVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 367
Query: 464 TQVAL--------GEDYDGNTDRISNMEHKD------KQSITNTPNFVPNSHYSSFD--- 506
+++L G GN D+ NM+ + ++ + P + ++ + +
Sbjct: 368 VEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIG 427
Query: 507 ------------KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
K F P+ +Y L+ KAL M + G+ N +++
Sbjct: 428 NEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYS 487
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+LI+ + A + + + +DG+ PDVV Y IK + +A + +EM+
Sbjct: 488 MLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKK 547
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +P T++ ++ +R G E+++ L ++ M ++G
Sbjct: 548 RHRPTSRTFMPIIHGFARAG---EMRRALEIFDMMRRSG 583
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 43/364 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M G A+ NI++ C
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + ++ + G D +Y+T++K A+ W+ A ++ ++M+
Sbjct: 332 KQGRV---DDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA L E+M + GCE N N L+ CV+ + D A
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG-RVDSALE 446
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF S T++ T + G E D + ++ M KD
Sbjct: 447 LFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD------------------- 487
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C +A L+ +M G +PN I++ L+D N
Sbjct: 488 -----CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 542
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + +G+SPD+V Y++ I V R R+++A +F ++ ++P V Y
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 624 LLRA 627
+L A
Sbjct: 603 ILLA 606
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 183/417 (43%), Gaps = 48/417 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 130 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 244
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 245 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 364 GLCRAERWEDAKELLKEMVRKN-----CPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 419 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 477
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 37/411 (9%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
VC G + ++ + +++R++ T NI +N ++N + + E + G
Sbjct: 190 VCKSTG-FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SY +LK C A +E++ E+ K + +V T+ +V+ F + A
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMME---KNCMPNEV-TFDMLVRFFCRGGMVERA 304
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++V E M G NT + +IN G V+ A M GC P++ +L+
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 443 CVEACQFDRAFRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
A +++ A L F ++ Q L E +++S EH +
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS--EHGCE 422
Query: 488 QSITNTPNFVPNSHY------SSFDKRFSF--KPTTTTYNILMKACCTDYYRVKA---LM 536
+I T N + N S+ + +S KP T TY L+ C + R+ A L+
Sbjct: 423 VNIV-TYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC-NAERLDAAAELL 480
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +PN +++ +L+ G ++ A+++++ M E G +P+++ Y T + +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++A L + + P++VTY +++ SR + E + + QD+
Sbjct: 541 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C T + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L + G PD V+YTT +K +KR + LF EM PN VT+ L+R
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 296
Query: 630 RYGSLHEVQQCL 641
R G + Q L
Sbjct: 297 RGGMVERAIQVL 308
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 107/557 (19%), Positives = 212/557 (38%), Gaps = 118/557 (21%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 183 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 239 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 283
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 284 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 453 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A+ L E+M++ GC PN N LL + C + A L
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL--------------- 553
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+SN P TY+ ++ + +A
Sbjct: 554 ----VSN----------------------------GVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + ++ +G+ P + + ++ A N +GA+ M +G P+ + Y T I+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 593 CVRSKRLKQAFSLFEEM 609
LK+ L E+
Sbjct: 642 LANEDFLKETRDLLREL 658
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY +++ C D RV +L+++M G P+ +++T+L++A S A++
Sbjct: 143 PDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L MR G +P++V Y I R R+ A + Y QP+ V+Y T+L+
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261
Query: 630 RYGSLHEVQQCLA 642
+V++ A
Sbjct: 262 AAKRWEDVEELFA 274
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 116 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 638 QQCL 641
++ L
Sbjct: 235 REFL 238
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 59/382 (15%)
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL------- 331
D+ S +I+ FN+ +N+ + L+ LE++ +M G D+ SY I++
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168
Query: 332 ---------------------KAC-------CLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
KAC C G LA E+ V KG +K++
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGV----IKGGVKVNS 224
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+ ++ F A+K+K M G P+ +T++ L+N C G+V++A+ L E
Sbjct: 225 LVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M ++G EP+ N LL+ +A DRA + +K + Y+
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDV-VSYNTVITAFCKAR 343
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
K Y F++ +P T+NIL+ A + + VK L++EM
Sbjct: 344 RTRKG-------------YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + P+ I +T ++D +G V+ A + + M E+G++PDV++Y + ++ R+
Sbjct: 391 TKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450
Query: 600 KQAFSLFEEMKHYQIQPNLVTY 621
A LF+EM+ + P+ VTY
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTY 472
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+Y+ + A C A N + I+ + +++ G + D++ ++T + + + AL++
Sbjct: 83 TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVP-DIWAFNTYLNLLCRQNRLETALEL 141
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M S G P+ ++++ +I+A NA ++A ++ ++ G P+ + C L+
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ D A+ L +V Y+ D M DK +F
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVN-SLVYNALIDGFCRMGRVDKAM-----------KIKAF 249
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
R P TYNIL+ CC + +A L+ M G+ P+ S+ L+ +
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 564 VEGA-LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ A L +++ M+ GM DVV+Y T I +++R ++ + LFEEM I+P++VT+
Sbjct: 310 VDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368
Query: 623 TLLRARSRYGSLHEVQQCL 641
L+ A R GS H V++ L
Sbjct: 369 ILIDAFLREGSTHVVKKLL 387
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQNVTLNIYVFNS 296
A+R + ++ P++Y ++ G C M RA + E ++++ + ++ +N+
Sbjct: 278 AVRLVETMERSGVEPDLYSYNELLK--GFCKANMVDRAHLMMVERMQTKGMC-DVVSYNT 334
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ A + E+++ M G+ DM ++NIL+ A G+T + +++ E+ +
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
VL D Y+ +V +A V DM+ GV P+ I++++L+N V
Sbjct: 395 ---VLP-DCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVE------ACQ-----FDRAFRLFRSWTLSK 463
AMHLF+EM G P+ +++ + AC+ +R F L R LS+
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRH--LSE 508
Query: 464 TQVALGEDYDGNT 476
T V + DG T
Sbjct: 509 TLVNAIQSSDGTT 521
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 16/256 (6%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + + + + + S I+ AGL+ QA++LF++M ++ C S N + + +
Sbjct: 1 MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV--PNSHYSSFD 506
A +R + + L Y + ++ + PN + P H D
Sbjct: 61 LHLAHHYYRRHVIPRGFSLLPFTYS-----------RFISALCSAPNNINLPLIHSLLLD 109
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGN 563
F P +N + C AL + M + G P+ +S+TI+IDA +
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ + + + G+SPD A + R+ A+ L + ++ N + Y
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229
Query: 624 LLRARSRYGSLHEVQQ 639
L+ R G + + +
Sbjct: 230 LIDGFCRMGRVDKAMK 245
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 178/417 (42%), Gaps = 56/417 (13%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + KK + + Y +SPN+ T+ID C GD++K+ +++++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + ++ L+ + + + +++ M+ G++ ++ +YN ++ C +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+Y E + G+L +V T+ ++ A K DM S GV PN +
Sbjct: 281 KALELYXE---MLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI+ AG + +A+ L E+ + P+ +IL++ C DR
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG---LCGVDRM--------- 384
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
E+ DG + K+ F P TYN L
Sbjct: 385 --------EEADGLLQEM---------------------------KKKGFLPNAVTYNTL 409
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + KA+ ++M G+ PN I+++ LID +G +E A+ + M G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDVVAYT I + K+AF L +EM+ + PN+ T L+ + G + +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 180/449 (40%), Gaps = 58/449 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
++ D + A R +D + P + I +I G+CG+ S A ++ +R+ + N
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR--GLCGESRISEAESMFRTMRNSGMLPN 262
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA-------------------------- 322
+Y +N++M+ +K LE+Y M G++
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI 322
Query: 323 DMAS---------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
DMAS YN L+ C AGN A ++ E++ E + DVFTYS ++K
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE----ILPDVFTYSILIKGL 378
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + ++M G PN +T+++LI+ G +E+A+ + +M + G EPN
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHK 485
+ L+ +A + + A L+ + + T + G DGNT + HK
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL-HK 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ Q PN S D + + + TD K NE+ S
Sbjct: 498 EMQEAGLHPNVFTLS--CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT--NELDRSLCS 553
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PNH+ +T LI G + A + MR G+ PDV I+ R+ L+ L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ I PN Y L + G L
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYL 642
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 163/402 (40%), Gaps = 58/402 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P M C ++D G + +Y D+ ++ + N+ + +L++ D +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + + Y IL++ C A+ ++ + + G+L +++TY+T++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF---RTMRNSGMLP-NLYTYNTMMD 271
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + AL++ +ML G+ PN +T+ LI+ + A +M G P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ +A A L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSL------------------------------------ 355
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
+S +K P TY+IL+K C L+ EM+ G PN +
Sbjct: 356 ----------HSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GN+E A+++ M E G+ P+++ ++T I ++ +++ A L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P++V Y L+ + G+ E ++++M +AG
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAG 503
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 163/404 (40%), Gaps = 85/404 (21%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L+KT G D G S + D+ P
Sbjct: 530 LF----LAKT----GTDTTG-------------------------SKTNELDRSLC-SPN 555
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L++ CTD ++ ++MR GL P+ + ++I + ++ + +
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + G+ P+ Y K S LK A S E +QP
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQP 655
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 43/364 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ +N N F+ L+ ++ ++V + M G A+ NI++ C
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + + ++ + G D +Y+T++K A+ W+ A ++ ++M+
Sbjct: 363 KQGR---VDDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 418
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFR 454
PN +T+++ I GL+EQA L E+M + GCE N N L+ CV+ + D A
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG-RVDSALE 477
Query: 455 LFRSW-----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF S T++ T + G E D + ++ M KD
Sbjct: 478 LFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD------------------- 518
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
P T+N+L+ C +A L+ +M G +PN I++ L+D N
Sbjct: 519 -----CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 573
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E AL++L + +G+SPD+V Y++ I V R R+++A +F ++ ++P V Y
Sbjct: 574 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 633
Query: 624 LLRA 627
+L A
Sbjct: 634 ILLA 637
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 183/417 (43%), Gaps = 48/417 (11%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G ++ ++ +D+ + ++ + L+
Sbjct: 161 DAARRLIASMPVAPDAYTYTPIIR--GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 218
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F +EV M+ G ++ +YN+++ C G A+E + L +
Sbjct: 219 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF---LNRLSSY 275
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D +Y+T++K AK W+ ++ +M+ PN +T+ L+ G+VE+
Sbjct: 276 G-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVAL 468
A+ + E+M GC N+ CNI++ + + D AF+ + T+S T V
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394
Query: 469 G----EDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTT-------- 515
G E ++ + + M K+ PN V N+ ++ + T
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCP-----PNEVTFNTFICILCQKGLIEQATMLIEQMSE 449
Query: 516 -------TTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ C RV + + ++ PN I++T L+ + ++ A
Sbjct: 450 HGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 508
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++L M + +P+VV + + + + +A L E+M + PNL+TY TLL
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 37/411 (9%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
VC G + ++ + +++R++ T NI +N ++N + + E + G
Sbjct: 221 VCKSTG-FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 279
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SY +LK C A +E++ E+ K + +V T+ +V+ F + A
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELFAEMME---KNCMPNEV-TFDMLVRFFCRGGMVERA 335
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++V E M G NT + +IN G V+ A M GC P++ +L+
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395
Query: 443 CVEACQFDRAFRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
A +++ A L F ++ Q L E +++S EH +
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS--EHGCE 453
Query: 488 QSITNTPNFVPNSHY------SSFDKRFSF--KPTTTTYNILMKACCTDYYRVKA---LM 536
+I T N + N S+ + +S KP T TY L+ C + R+ A L+
Sbjct: 454 VNIV-TYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC-NAERLDAAAELL 511
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM +PN +++ +L+ G ++ A+++++ M E G +P+++ Y T + +
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 571
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++A L + + P++VTY +++ SR + E + + QD+
Sbjct: 572 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C T + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L + G PD V+YTT +K +KR + LF EM PN VT+ L+R
Sbjct: 268 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 327
Query: 630 RYGSLHEVQQCL 641
R G + Q L
Sbjct: 328 RGGMVERAIQVL 339
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 166/402 (41%), Gaps = 69/402 (17%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVL 136
+ +++E+V S G F + + EM A G +I REGR+D L
Sbjct: 214 YTVLLEAVCKSTG----FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196
+L+ G P + S +LK C E+F E++E+ +P
Sbjct: 270 NRLSSYGFQPDTV---SYTTVLKGLCAAKRWEDVEELFA---EMMEKNCMP--------- 314
Query: 197 IVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCNFV-REFGKKRDLV 238
N+ ++ +R+ C +V RA + CN V K+ +
Sbjct: 315 ------NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 368
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
A + + + SP+ T++ G+C + ++ + +++ +N N FN+
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLK--GLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ + + M + G ++ +YN L+ C+ G A E++ +
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 483
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K + TY+T++ +A+ A ++ +ML PN +T++ L++ GL+
Sbjct: 484 ----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++A+ L E+M++ GC PN N LL + C + A L
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 581
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY +++ C D RV +L+++M G P+ +++T+L++A S A++
Sbjct: 174 PDAYTYTPIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 232
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L MR G +P++V Y I R R+ A + Y QP+ V+Y T+L+
Sbjct: 233 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 292
Query: 630 RYGSLHEVQQCLA 642
+V++ A
Sbjct: 293 AAKRWEDVEELFA 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y ++ A + ++ ++P+ ++T +I G V AL +L M
Sbjct: 147 YNTLVAGYCR-YGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S QA + +EM+ PN+VTY ++ R G + +
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 638 QQCL 641
++ L
Sbjct: 266 REFL 269
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 191/433 (44%), Gaps = 51/433 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D + PN+ ++ G+C G ++RA+ +++ S ++ +
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS--GLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D + L ++ K GV+ + +ILL C G A+++
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ Y+T++ + + Q A + E M S + P+ IT+++LIN
Sbjct: 360 MLVH---TGLVPTTAI-YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWT 460
++ +A L EM ++G +P+ + N L+ A A Q ++ F + +S
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNV 475
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S V +G + +M HKD VPN+
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKD---------VVPNAQ--------------- 511
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN ++ A +A L+ +M++ G+S + ++ +L+ + ++ A +++ +
Sbjct: 512 VYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNL 571
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PDVV+Y T I C +A L +EM Y I+P L TY LL A G +
Sbjct: 572 TNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631
Query: 635 HEVQQCLAVYQDM 647
H++ +CL YQ M
Sbjct: 632 HDM-ECL--YQHM 641
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 159/364 (43%), Gaps = 27/364 (7%)
Query: 293 VFNSLMNVNAH-DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ SL++V H D++ + + G D ++N ++AC AG+ L + + +
Sbjct: 129 LLESLLSVGRHADVRAAFGL---LVAAGARPDTFAWNKAVQACVAAGD--LDEALAMLRR 183
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++G D F+Y+ ++ + ALKV ++M+ GV PN IT++++I+
Sbjct: 184 MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKG 243
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E L ++MLQ G +PN N+LL A + D L T S + + G
Sbjct: 244 GDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT-SYSMLPDGFT 302
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY--NILMKACCTDY 529
Y D ++ D +++ S F + Y +IL+ C D
Sbjct: 303 YSILFDGLTRT--GDSRTM-----------LSLFGESLKKGVIIGAYTCSILLNGLCKDG 349
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
KA ++ + GL P + LI+ +++GA I + M+ + PD + Y
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + + + +A L EM+ + P++ T+ TL+ A R G L ++C V DM
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL---EKCFTVLSDM 466
Query: 648 WKAG 651
G
Sbjct: 467 QDKG 470
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 34/375 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + V N +N++++ V DL+ + M + G ++ +YN+LL C
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + + E+ + D FTYS + + L + + L GV
Sbjct: 277 RAGRMDETRALMDEMTSYS----MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T S L+N G V +A + E ++ G P + N L+ + AF +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F +S + + Y+ + + ME IT + V S D
Sbjct: 393 FEQMKSRHIRPDHIT----YNALINGLCKMEM-----ITEAEDLVMEMEKSGVD------ 437
Query: 513 PTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ T+N L+ A Y R L +++M+ G+ N IS+ ++ A +G +
Sbjct: 438 PSVETFNTLIDA----YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPE 493
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ IL M + P+ Y + I + S +QAF L E+MK + ++ TY LL+
Sbjct: 494 AVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLK 553
Query: 627 ARSRYGSLHEVQQCL 641
+ + E ++ +
Sbjct: 554 GLCKNSQIDEAEELI 568
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ N+L+++ + + V+A + G P+ +W + AC +G+++ AL +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 571 LKIM-REDGMSP-DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
L+ M R +G P D +Y I RS + A +F+EM + PN +TY T++
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 629 SRYGSL 634
+ G L
Sbjct: 241 VKGGDL 246
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 181/430 (42%), Gaps = 33/430 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + K A+ +D P++Y TII+ G+C G+ + +
Sbjct: 169 VTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN--GLCKIGETAAAAGLL 226
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + N+ ++++++ + D + L+++ M+ G+ D+ +YN L++ C
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A + E++ L + D+ T++ +V A V + M GV P+
Sbjct: 287 SQWKEASALLNEMRSLN----IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSL+ + V +A LF+ M+ GC+P+ NIL+ + + D A +LF
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ + N + + H Q S+ N N H + P
Sbjct: 403 EM--------IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN------LPNL 448
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+IL+ C Y KA L M++ PN + + ILIDA SGN+ A ++
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ P+ YTT I + L +A F M+ P+ ++Y ++R G
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIR-----GF 563
Query: 634 LHEVQQCLAV 643
LH + AV
Sbjct: 564 LHHKDESRAV 573
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 53/338 (15%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G L +++T S ++ F+ + +A V ++ G+ P +T+++LIN
Sbjct: 122 KQMELAG-LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCK 180
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G QAM LF++M+ GC P+ ++ + + A L L K + A +
Sbjct: 181 VGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL-----LKKMEEAGCQ 235
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
I + KD++ F S+ K P TYN L++ C +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIF-------SYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ AL+NEMR++ + P+ +++ +L+D G V A +LK M E G+ PDVV Y++
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 589 AI---------------------KVC--------------VRSKRLKQAFSLFEEMKHYQ 613
+ K C + KR+ +A LF EM H
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN V+Y TL+ + GSL E + ++++M G
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARN---LFKNMHTNG 443
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 164/385 (42%), Gaps = 41/385 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NIY + L+N +H DL F+ V + KLG+ + ++ L+ C G A E
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFS--VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + + A+G + DV+TY+TI+ A + + M AG PN +T+S++I
Sbjct: 190 LFDD---MVARGC-RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
++ V +A+ +F M G P+ N L+Q Q+ A L RS +
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305
Query: 463 KTQVALGEDYDG--NTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
V D ++S + K + P+ V YSS +S
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT---YSSLMYGYSLRSEVVEA 362
Query: 512 ------------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+ C K L NEM GL+PN++S+ LI
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++ A + K M +G P++ Y+ + + +AF LF M+ +PN
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
LV Y L+ A + G+L + ++ +
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFS 507
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFS---------FKPT 514
V +G+ YD ME T + + N SH D FS +PT
Sbjct: 108 VKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPT 167
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ L+ C + + L ++M G P+ ++T +I+ G A +LK
Sbjct: 168 IVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLK 227
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G P+VV Y+T I + +R+ +A +F MK I P++ TY +L++ +
Sbjct: 228 KMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFS 287
Query: 633 SLHEVQQCL 641
E L
Sbjct: 288 QWKEASALL 296
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y V +L +M GLSPN + +ILI+ V+ A +L + + G+ P +V +TT
Sbjct: 114 YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTT 173
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + + QA LF++M +P++ TY T++ + G E + + M
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIG---ETAAAAGLLKKME 230
Query: 649 KAG 651
+AG
Sbjct: 231 EAG 233
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 189/416 (45%), Gaps = 68/416 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ + R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSSAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V EDM+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH +Q + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEQLV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR +G +P+ +++T++ID+ G + A ++L+ M + G+ P ++A++ I
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R A + F+ M ++P+ + Y+ +L +R G + ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG---DTEKMLCLYRKM 529
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 158/372 (42%), Gaps = 35/372 (9%)
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
QN L Y+ L + A +V+ +MQ +G+ A + Y ++ C G A
Sbjct: 672 GQNCNLYEYLITCL--IEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETA 729
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ + + + L++ + I+ + + K WQ A + + + A I W+
Sbjct: 730 HRLMDDA----LQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRI-WN 784
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----- 457
+LI+A A +GL E+A +F+ M++ G P N +++A + + D + +
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ +SK+ V L D + E + ++PN H
Sbjct: 845 NFKISKSTVLLLLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL--------------- 887
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y ++ C + V+ ++ EM G P+ L++ +GN + Q+ + +
Sbjct: 888 YRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++ L
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK-AELR 1006
Query: 636 EVQQCLAVYQDM 647
E Q ++++M
Sbjct: 1007 E--QADQIFEEM 1016
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S++++ H +F +E+ M+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D+A N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSI--LEAG--LEPDEDTYNTLIVMYCRSFRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA +FEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ A +A L + + + T + + ++ +++ N N
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN------N 1085
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SS + S P +T ++ +K DY + EM+ G+ P+H WT I A
Sbjct: 1086 LKSSSLE--VSTLPYSTVFDAYLKN--GDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Query: 560 GSGNVEGALQILKIMREDG 578
A+ +LK +++ G
Sbjct: 1142 LCEQTADAILLLKSLQDCG 1160
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 150/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGKIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G E+Y V+ L+ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMN-FKISKSTVLLLLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+I+ + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++RS +
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEA----------------------------- 949
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + + L+NEM GL+P
Sbjct: 950 ------------------GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A QI + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G E + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVL 1083
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 172/393 (43%), Gaps = 60/393 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
+CG C G +++ A++E++ ++ V+ + N++M + K + + +M K +
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M D+ SYN L+ C GN A + E++ L ++ TY+T++ +
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN----LSFNIVTYNTLIDGLCRLGDLE 429
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
ALK+KEDM++ G+ P+ +T++ L+N G + A F+EML G P+
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPD-------- 481
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
QF R+ +GE G+T + ++ ++ +T
Sbjct: 482 -------QFAYTARI------------VGELKLGDTAKAFKLQ---EEMLTK-------- 511
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
F P TYN+ + C + L+ +M G P+H+++T + A
Sbjct: 512 ---------GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G++ +I M G +P VV YT I + RL A + F EM+ + PN+
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV 622
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+TY L+ + + ++ Q + +M + G
Sbjct: 623 ITYNVLING---FCKVRKMDQACKFFIEMQEKG 652
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/530 (22%), Positives = 222/530 (41%), Gaps = 82/530 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ G + + ++ K+ E G P E+ F +L N + GE++ GL++ + +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEV----TFNVLINGLSK---KGELQQAKGLIQEMAKA 301
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRA--------DILFCNFVREFGKKRD 236
L V I C V + +V R + + F +E GK D
Sbjct: 302 GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKE-GKMSD 360
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVF 294
L D KK+L P++ T+I G C G+ ++ + ++LR +N++ NI +
Sbjct: 361 ARQQLS--DMLKKNLM-PDIISYNTLI--YGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L++ DL+ L++ ++M G+ D+ +Y +L+ C GN ++A+E + E+ H
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMA--LKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L D F Y+ ++ + K A K++E+ML+ G P+ IT++ +N
Sbjct: 476 VG----LAPDQFAYTA--RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+A L ++M++ G P+ + A +E +F LS+ Q
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD-MLSRGQT---- 584
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
PT TY +L+ A +
Sbjct: 585 ------------------------------------------PTVVTYTVLIHAHALNGR 602
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A EM+ G+ PN I++ +LI+ ++ A + M+E G+ P+ YT
Sbjct: 603 LDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I + ++A L+ +M +I+P+ T+ LL+ + + VQ
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQ 712
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 166/407 (40%), Gaps = 33/407 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C I+ + +K+ +Y + + + +N++++ +++ L++
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
MQ+ G ++N+L+ G A+ + E+ AK L++ +TY+ ++
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM----AKAGLRVSPYTYNPLIC 315
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + E+M++ GV+P + ++++ G + A +ML+ P
Sbjct: 316 GYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMP 375
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEH--KD 486
+ N L+ AF L R LS V DG R+ ++E K
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC-RLGDLETALKL 434
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K+ + N P TY +L+ C + K +EM VGL
Sbjct: 435 KEDMINR----------------GIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ ++T I G+ A ++ + M G PDV+ Y + + L++A
Sbjct: 479 APDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGE 538
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L ++M P+ VTY + + A G L E ++ ++ DM G
Sbjct: 539 LLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE---IFYDMLSRG 582
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H L+ E++ +M G + +Y +L+ A L G A + E ++ KGV+
Sbjct: 565 NGH-LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE---MQEKGVVP 620
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ F + A K +M G+ PN T++ LIN N G ++A+ L
Sbjct: 621 -NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRL 679
Query: 421 FEEMLQAGCEPNSQCCNILLQAC-----VEACQF 449
+ +ML P+S LL+ V+A QF
Sbjct: 680 YAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQF 713
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYD-GNTDRI----SNMEHKDKQSITNT 493
+ A R+ S L + +G D NT+++ ++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 74/358 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 356 ------------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+G LD+ Y+ ++ +F D + ++ DM G P+
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK--- 512
L H T N + N S +F + S K
Sbjct: 641 DMGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 513 ------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 679 KMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ +P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ R+ H + + + DM K G
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEG 471
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 74/357 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK---- 512
L H T N + N S +F + S K
Sbjct: 642 MGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 513 -----PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 680 MKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ R+ H + + + DM K G
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEG 471
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 178/385 (46%), Gaps = 30/385 (7%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILL 331
M+ R I DL + N+ +N F L V +D +K TL + ++ G + SY L+
Sbjct: 34 MELRGIQTDLVNLNILVN--CFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLI 91
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG T A ++ + L +++ +V YSTI+ K A + ML
Sbjct: 92 DGLCKAGETRAAMQVLRNIDGL----LVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLL 147
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++P+ IT+++L+ C G +++A+ LF +ML +P+ NIL+ + + +
Sbjct: 148 KRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKK 207
Query: 452 AFRLFRSWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A R+ + ++ D Y+ D ++ ++K + FV N+ R
Sbjct: 208 A----RNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT------FVFNTM-----AR 252
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y++++ C +A L+ EM + ++PN ++++ LID SG +
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ M G DV+ Y + + ++ ++ +A +L ++K IQP++ TY L+
Sbjct: 313 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVD 372
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L + Q+ VYQ + G
Sbjct: 373 GLCKNGRLKDAQE---VYQILLIKG 394
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 169/402 (42%), Gaps = 76/402 (18%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ R + LR D L PN+ + TII +C D + A +Y + + ++
Sbjct: 98 GETRAAMQVLRNIDGL---LVQPNVVMYSTII--YSLCKDKLVIDAFDLYSQMLLKRISP 152
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +N+LM + LK + ++ M + D+ ++NIL+ C G A+ +
Sbjct: 153 DVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVL 212
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ K + DV TY++++ + K A V M GVTP+ ++S +IN
Sbjct: 213 A----VMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMING 268
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+V++A++L +EM PN+ + L+ ++ R+F +W
Sbjct: 269 LCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG------LHKSGRIFDAW-------- 314
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D ++ M ++ + + TYN L+ A C
Sbjct: 315 ---------DLVNEMHNRGQPA------------------------DVITYNSLLDALCK 341
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
++ KA L+ +++ G+ P+ ++TIL+D +G ++ A ++ +I+ G D +
Sbjct: 342 NHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSL- 400
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+A SL +M+ PN VT+ L+RA
Sbjct: 401 -------------FDKALSLLSKMEDNGCTPNPVTFEILIRA 429
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 148/362 (40%), Gaps = 34/362 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + ++ A Y SP++ T++ C I G ++ ++
Sbjct: 120 VMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQ 179
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ +IY FN L++ ++K V M K V D+ +YN L+ L
Sbjct: 180 MLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQ 239
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + +GV DV +YS ++ K A+ + ++M S + PNT+
Sbjct: 240 ENKATFVFNT---MARRGVTP-DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTV 295
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI+ +G + A L EM G + N LL A + Q D+A L
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355
Query: 460 TLSKTQVALGEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSHYSS-FDKRFSFKPTTTT 517
Q + Y D + N KD Q + + H S FDK S
Sbjct: 356 KDQGIQPDI-YTYTILVDGLCKNGRLKDAQEVYQIL-LIKGYHLDSLFDKALS------- 406
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+++M G +PN +++ ILI A + + A+++L+ M
Sbjct: 407 -----------------LLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449
Query: 578 GM 579
G+
Sbjct: 450 GL 451
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 178/417 (42%), Gaps = 56/417 (13%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + KK + + Y +SPN+ T+ID C GD++K+ +++++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + ++ L+ + + + +++ M+ G++ ++ +YN ++ C +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E+Y E + G+L +V T+ ++ A K DM S GV PN +
Sbjct: 281 KALELYQE---MLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LI+ AG + +A+ L E+ + P+ +IL++ C DR
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG---LCGVDRM--------- 384
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
E+ DG + K+ F P TYN L
Sbjct: 385 --------EEADGLLQEM---------------------------KKKGFLPNAVTYNTL 409
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + KA+ ++M G+ PN I+++ LID +G +E A+ + M G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PDVVAYT I + K+AF L +EM+ + PN+ T L+ + G + +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 164/402 (40%), Gaps = 58/402 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P M C ++D G + +Y D+ ++ + N+ + +L++ D +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + + + Y IL++ C A+ ++ + + G+L +++TY+T++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF---RTMRNSGMLP-NLYTYNTMMD 271
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + AL++ ++ML G+ PN +T+ LI+ + A +M G P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N L+ +A A L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSL------------------------------------ 355
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
+S +K P TY+IL+K C L+ EM+ G PN +
Sbjct: 356 ----------HSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GN+E A+++ M E G+ P+++ ++T I ++ +++ A L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P++V Y L+ + G+ E ++++M +AG
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAG 503
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 190/463 (41%), Gaps = 92/463 (19%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN------------TPNFVPNSHY 502
LF + T + T + + D + ++ ++ + I+ N P +H
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHL 589
Query: 503 SSF---------DKRFSFKPTTTT----YNIL----------------MKACCTDYYRV- 532
+ KR+ T+ + IL +KAC V
Sbjct: 590 HTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVE 649
Query: 533 -KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K + + G P T LI +GNV A M ++ S +++++T+ I
Sbjct: 650 GKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHN----MFDEIPSKNLISWTSVIS 705
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
V ++R +A LF +M+ +QP++VT L A + G+L
Sbjct: 706 AYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGAL 748
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV-----TLNIYVFNSLMNVNAHDLKFT 308
P +++ ++I + G+ + +++++ S+N+ ++ YV N N
Sbjct: 664 PIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNK-------A 716
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ MQ V D+ + + L AC G + + I+ ++H +G L D+ ++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRH---RG-LDTDLCLNNS 772
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ +++ A + + V PN +T+ ++ AC++AGLVE+ F M
Sbjct: 773 LINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSM 822
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S N ISWT +I A + ALQ+ + M+ D + PD+V T A+ C L
Sbjct: 694 SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ ++H + +L +L+ S+ G +
Sbjct: 754 IHAYIRHRGLDTDLCLNNSLINMYSKCGEI 783
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 163/386 (42%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y +S E + + T ++ + L+ N+ ++ V + +++ G D+ +Y
Sbjct: 83 GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAY 141
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ A A + + ++++G L DV TY+ ++ F +AL++ E
Sbjct: 142 NALISGFIKANQLENANRV---LDRMKSRGFLP-DVVTYNIMIGSFCSRGKLDLALEIFE 197
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
++L P IT++ LI A G ++ AM L +EML G EP++ N +++ +
Sbjct: 198 ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEM 257
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D+AF L RS +
Sbjct: 258 MVDKAFELLRSLS----------------------------------------------- 270
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP TYNIL++ + + + L++EM ++G PN ++ +ILI G VE
Sbjct: 271 SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +L+ M+E G+ PD Y I R RL A E M P++V Y T++
Sbjct: 331 EAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIM 390
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
R G + Q L V++ + + G
Sbjct: 391 AGLCRTG---KADQALEVFEKLDEVG 413
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 182/422 (43%), Gaps = 42/422 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV-----TLNIYVFNSLMN--VNAHDL 305
+P++ +C +I + SR I + R + +++ +N+L++ + A+ L
Sbjct: 101 TPDVILCTKLIK------GFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQL 154
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ V M+ G + D+ +YNI++ + C G LA EI+ E+ K + V T
Sbjct: 155 ENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL----LKDNCEPTVIT 210
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ +++ +A+K+ ++MLS G+ P+T+T++++I +V++A L +
Sbjct: 211 YTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS 270
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-------TLSKTQVALGED-YDGNTD 477
GC+P+ NILL+ + ++ +L + + +G DG +
Sbjct: 271 SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSF--DKRFSFK-------------PTTTTYNILM 522
N+ K+ + + + F + R P YN +M
Sbjct: 331 EAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIM 390
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C +AL ++ VG PN S+ L A SG+ AL+++ + G+
Sbjct: 391 AGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD + Y + I R + +A L +M+ + +PN+V+Y +L + ++ +
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEV 510
Query: 641 LA 642
LA
Sbjct: 511 LA 512
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 28/442 (6%)
Query: 196 RIVQLCVNKPDVNLAIRYACIVPR---ADILFCN-FVREFGKKRDLVSALRAYDASKKHL 251
++++ N ++ A R I+ R D+ N + F K L +A R D K
Sbjct: 109 KLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I G + I+E+L N + + L+ D + +
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAM 228
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ D +YN +++ C ++ + + ++ L ++G K D+ TY+ +
Sbjct: 229 KLLDEMLSKGLEPDTLTYNAIIRGMC---KEMMVDKAFELLRSLSSRGC-KPDIITYNIL 284
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ W K+ +M+S G PN +T S LI G VE+A++L M + G
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P++ C + L+ + D A F + +S + +Y+ + D+
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATE-FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA- 402
Query: 490 ITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
F+K P ++YN L A + D YR ++ ++ G+
Sbjct: 403 ------------LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++ LI G V+ A+++L M+ P+VV+Y + + R A +
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEV 510
Query: 606 FEEMKHYQIQPNLVTYITLLRA 627
M QPN TYI L+
Sbjct: 511 LAAMTEKGCQPNETTYILLIEG 532
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D L F RE + DL + Y S L P++ TI+ G+C G ++ +
Sbjct: 352 DPLIAGFCRE--GRLDLATEFLEYMISDGCL--PDIVNYNTIM--AGLCRTGKADQALEV 405
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E L N+ +N+L + ++ D LE+ + G+ D +YN L+ C
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCR 465
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E+ +++ G + +V +Y+ I+ A++V M G P
Sbjct: 466 DGMVDEAIELLVDMQ----SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQP 521
Query: 397 NTITWSSLINACANAGLVEQAMHL 420
N T+ LI +GL +AM L
Sbjct: 522 NETTYILLIEGIGFSGLRAEAMEL 545
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 24/368 (6%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVM 321
G C AI + +RS V ++ ++ LM+ N ++ +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSMTKRGLK 333
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y LL+ G V E++G + + G+ D + +S ++ +A+
Sbjct: 334 PEITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYANQGKVDQ 389
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+++RA L + + L + + I + K+ + I + F
Sbjct: 450 GLCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF----- 499
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 --ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 620 TYITLLRA 627
TY +L
Sbjct: 618 TYNIILHG 625
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 70/420 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 182/415 (43%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + + GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYANQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 209/475 (44%), Gaps = 54/475 (11%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A + + V K D VSAL + N+ I I+D G+++K++
Sbjct: 43 PDA-VTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN 101
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ ++ + + N+ +N +++ K++ ++ ++M + + D+ +++ L+ A
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYSTIVKVFADAKWWQMALKVKEDMLS 391
G A+E+Y E+ L+ ++F TYS+++ F + A + + M+S
Sbjct: 162 KEGKVSGAEELYREM--------LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVS 213
Query: 392 AGVTPNTITWSSLINACANA-----------GLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G +P+ IT ++LI+ C A G V A LF+EM+ G P+ CN LL
Sbjct: 214 KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLL 273
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVAL------------GEDYDGNTDRISNMEHKDKQ 488
E + ++A +F+ + SK + G D D +++ +
Sbjct: 274 AGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVE 333
Query: 489 SITNTPN-----FVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTD--YYRVKAL 535
+ T N FV ++ + + P+T TYN ++ C + +
Sbjct: 334 TDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQM 393
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++ M + G SP+ ++++ LI +G V+ L++ M + G+ D + Y I +
Sbjct: 394 VDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCK 453
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L A +FEEM + P+ +T+ ++L + E+Q+ L + +D+ K+
Sbjct: 454 VGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC---TKAELQKGLTMLEDLQKS 505
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 200/474 (42%), Gaps = 49/474 (10%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P + F + ++ ++ AL D + P+ TI++ G+C GD + +
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVN--GMCKLGDTVSA 64
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
+ + + N+ +++++++ D ++ M + G+ ++ +YN ++
Sbjct: 65 LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A+++ ++ + DV T+S ++ F A ++ +ML
Sbjct: 125 YCSYGKWSDAEQLLRDMIERN----IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA------- 446
+ P TIT+SS+I+ +E A H+F+ M+ GC P+ N L+ C A
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 447 -CQFDR---AFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM---EHKDKQSI- 490
CQ A LF+ ++ + G +G ++ M K K +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300
Query: 491 TNTPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKACCTD--YYRVKALMN 537
T T N + N + D+ + + TYNIL+ + + R + +
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+ +++ ++D +E A Q++ M +G SPDVV ++T IK ++
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ LF EM + + +TY L+ + G L+ Q ++++M +G
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQD---IFEEMVSSG 471
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 42/296 (14%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ G N +T+++L+N G V QA+ L + M++ G +P++ ++ +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 449 FDRAFRLFRSWTLS--KTQVALGEDYDGNTDRI-SNMEHKDKQSI---TNTPNFVPN--- 499
A + R S K V + Y DR+ + H Q+I + PN
Sbjct: 61 TVSALNMLRKMDESQIKANVVI---YSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLT 117
Query: 500 -----SHYSSFDK------------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
Y S+ K + P T++ L+ A + + L EM
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR-- 598
+ P I+++ +ID +E A + +M G SPD++ T I C R+KR
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 599 ---------LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ A LF+EM + P++VT TLL G L + + V+Q
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQ 293
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G N +++T L++ G V AL ++ M E+G PD V Y T + +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ +M QI+ N+V Y ++ + G+ + Q ++ +M + G
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN---IFTEMHEKG 110
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 184/400 (46%), Gaps = 27/400 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-- 309
PN Y +I+ G+C G+ ++ + E++ S+ + N +++ L+ ++ + +L
Sbjct: 453 PNAYTYGIMIN--GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E +NM K V+ D+ YN L+K G A+E Y +V+ K L D FTYS +
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ----KRGLVPDEFTYSGL 566
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + A ++ + ML++G+ PN T++ L+ + E+ + + ML +G
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQ 488
+P++ I+++ + + AF + + L D + IS + + D +
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVE----KNGLVPDLHIYSSLISGLCKMADME 682
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ + + +P YN L+ C D R + + + + GL P
Sbjct: 683 KAVGLLDEM---------AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T LID +G++ A + K M + G++PD Y C + L+QA L
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 793
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
EEM + + ++ + TL+R + G L E ++ L V D
Sbjct: 794 EEMFN-RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMD 832
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 163/402 (40%), Gaps = 58/402 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y T ++ D+ ++ ++E++R ++ +N +N +++ + ++
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G+ D +Y L+ C G A+ + E + G LK +V Y+T+V
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDE---MSCSG-LKPNVVVYATLVD 358
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A + +M+SAGV PN I + +LI G + +A L EM++ G P
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ + L+Q + +H DK
Sbjct: 419 DTFTYHPLMQG--------------------------------------HFQHYDKDGAF 440
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + NS P TY I++ C + +A L+ EM + GL PN
Sbjct: 441 ELLNEMRNS---------GILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI G++ A + L+ M + + PD+ Y + IK R+++A + ++
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + P+ TY L+ + +L + Q L Q M +G
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL---QQMLNSG 590
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 29/356 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M LG+ N LLK A L ++ G +E G+ DV+TYST ++
Sbjct: 201 MGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG---FMEGAGIPP-DVYTYSTFLEAHC 256
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A+ + A KV E+M N +T++ +I+ +G VE+A EEM+ G P++
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAF 316
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKDKQSIT 491
L+ + + A L + S + V DG E D +
Sbjct: 317 TYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEM 376
Query: 492 NTPNFVPNS-HYSSFDK-------------------RFSFKPTTTTYNILMKACCTDYYR 531
+ PN Y + + + +P T TY+ LM+ Y +
Sbjct: 377 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDK 436
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
A L+NEMR G+ PN ++ I+I+ +G + A +L+ M +G+ P+ Y
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
I + + A E M + P+L Y +L++ S G + E ++ A Q
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ 552
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 190/440 (43%), Gaps = 35/440 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSS---PNMYICRTIIDVCGIC--GDYMKSR 276
+++ V F K+ A A+D + +S+ PN + +I G+C G ++
Sbjct: 351 VVYATLVDGFMKEG---KAAEAFDILNEMISAGVQPNKIMYDNLIR--GLCKIGQLGRAS 405
Query: 277 AIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ + + ++ LM + +D E+ M+ G++ + +Y I++
Sbjct: 406 KLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGL 465
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + A + ++ + ++G LK + F Y+ ++ + +A + E+M A V
Sbjct: 466 CQNGESKEAGNL---LEEMISEG-LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++SLI + G +E+A + ++ + G P+ + L+ + ++A +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L + S L + D TD + + D + +++ + S S DK P
Sbjct: 582 LLQQMLNS----GLKPNADTYTDLLEGYFKSNDHEKVSS----ILQSMLGSGDK-----P 628
Query: 514 TTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y I+++ A M E+ GL P+ ++ LI ++E A+ +L
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++G+ P +V Y I RS + +A ++F+ + + PN VTY L+ +
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G ++ +Y+DM G
Sbjct: 749 G---DITDAFDLYKDMLDRG 765
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I + + + K D+ A+ D K P + +ID G C GD
Sbjct: 661 LVPDLHI-YSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID--GFCRSGDIS 717
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++R +++ + ++ + N + +L++ N D+ ++YK+M G+ D YN+L
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLA 777
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A + L Q ++ + + +G + +F ST+V+ F Q K+ M+
Sbjct: 778 TGCSDAAD--LEQALF-LTEEMFNRGYAHVSLF--STLVRGFCKRGRLQETEKLLHVMMD 832
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ PN T ++I AG + +A +F E+ Q
Sbjct: 833 REIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 114/257 (44%), Gaps = 18/257 (7%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+R + ++ A +K+ P+++I ++I G+C D K+ + +++ +
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS--GLCKMADMEKAVGLLDEMAKE 694
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ I +N+L++ + D+ V+ ++ G++ + +Y L+ C G+ A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++Y K + +G+ D F Y+ + +DA + AL + E+M + G ++ +S+
Sbjct: 755 FDLY---KDMLDRGIAP-DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL-FST 809
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+ G +++ L M+ PN+Q ++ +A + A R+F K
Sbjct: 810 LVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK 869
Query: 464 TQVALGEDYDGNTDRIS 480
+ +TDR S
Sbjct: 870 ASQS-------STDRFS 879
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 194/458 (42%), Gaps = 59/458 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D V+AL + P+ I +I VC G +++ + ++ S +N+
Sbjct: 271 KKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVV 330
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V +LM DL LE++ M + G+ + +Y ++++ CC GN A EIY ++
Sbjct: 331 VATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQM 390
Query: 351 KHLEA-----------KGVLKL-------------------DVFTYSTIVKVFADAKWWQ 380
K+ + +G LK +VFTY++++
Sbjct: 391 KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMS 450
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + E M+ GV P+ ++++++I G ++ A +F EML+ G +PN ++L+
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510
Query: 441 QACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPN 495
+ + AF L+ R ++ + +G R S + + K+ +
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQE--- 567
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTI 553
F PT TYN ++ + AL EM +G+SPN ++T
Sbjct: 568 --------------GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI+ S N++ AL+++ M+ G+ DV Y I R + A L E++
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN V Y +++ S + L ++ L +++ M G
Sbjct: 674 LSPNKVVYSSMI---SGFRKLQNMEAALHLHKRMINEG 708
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 241/559 (43%), Gaps = 55/559 (9%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
I S+REG+++ G ++ GV D + ++ + DS V +
Sbjct: 231 IRASMREGKLEEAEGWFREAKNKGVE----LDARAYSIVIEAVCKKPDS------VAALG 280
Query: 180 VLEEFR----LPVKELDEEFRIVQLCVNKPDVNLAIR-----YACIVPRADILFCNFVRE 230
+L E R +P + + R++ +C+ + + A++ +C P ++ ++
Sbjct: 281 LLREMRDKGWVPHEVIFT--RVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKG 338
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ K+ DL SAL +D ++ PN II+ C G+ K+ IY +++++++
Sbjct: 339 YCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPT 398
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ NSL+ + A + +++ G+ A++ +YN LL C G A I+
Sbjct: 399 VFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIW- 456
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + KGV + V +Y+ ++ A V +ML G+ PN IT+S L++
Sbjct: 457 --EKMVRKGV-RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF----DRAFRL----FRSWT 460
G E A L++ M P+ CNI++ +A + DR +L F
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------------- 505
++ + G +G+ + + + + I +PN F + + F
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAV-YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMD 632
Query: 506 -DKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K + T Y L+ C D L++E++ VGLSPN + ++ +I
Sbjct: 633 EMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQ 692
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E AL + K M +G+ D+ YTT I ++ +L A L+ EM I P+L+TY
Sbjct: 693 NMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYS 752
Query: 623 TLLRARSRYGSLHEVQQCL 641
L+ G L Q+ L
Sbjct: 753 VLIHGLCNKGQLENAQKIL 771
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 160/380 (42%), Gaps = 30/380 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C GD + ++ ++ + + N+ ++ LM+ D ++ +Y M+ +
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ NI++ C AG T +Q+ +K L +G + TY+ I+ F
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQD---RLKKLVQEGFIPT-CMTYNCIIDGFVKEGSVN 590
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V +M GV+PN T+++LIN + ++ A+ + +EM G E + L+
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650
Query: 441 QACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNME---HKDKQSITNTP 494
A +L + LS +V G ++ NME H K+ I
Sbjct: 651 DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG-FRKLQNMEAALHLHKRMINEG- 708
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+P + TT + L+K L EM G+ P+ I++++L
Sbjct: 709 --IP----------CDLQIYTTLISGLLKE--GKLLFASELYAEMLAKGIMPDLITYSVL 754
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G +E A +IL+ M M+P V Y T I + L++AF L EM +
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814
Query: 615 QPNLVTYITLLRARSRYGSL 634
P+ TY L+ + + G+L
Sbjct: 815 VPDDTTYDILVNGKVKDGNL 834
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 159/401 (39%), Gaps = 66/401 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY M GV D A+ +++++A G A+ + E K+ KGV +LD YS +
Sbjct: 210 DVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN---KGV-ELDARAYSIV 265
Query: 370 VKVFA----------------DAKWWQM-------------------ALKVKEDMLSAGV 394
++ D W A+KVK +MLS G
Sbjct: 266 IEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGK 325
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
N + ++L+ G ++ A+ LF++M + G PN+ ++++ C + D+A+
Sbjct: 326 PMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYE 385
Query: 455 LF---RSWTLSKTQVALGEDYDGNTDRISNMEHK---DKQSITNTPN-FVPNSHYSSFDK 507
++ ++ +S T + G S E D+ N F NS S K
Sbjct: 386 IYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCK 445
Query: 508 ---------------RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
R +P+ +YN ++ C D + EM GL PN I+
Sbjct: 446 EGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLIT 505
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+++L+D G+ E A + MR + ++P I ++ R ++ +++
Sbjct: 506 YSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLV 565
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P +TY ++ + GS V LAVY +M K G
Sbjct: 566 QEGFIPTCMTYNCIIDGFVKEGS---VNSALAVYTEMCKIG 603
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ N + F K ++ AL+ D K ++ + +ID G C GD + + + +
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID--GFCRKGDMVNASQLLSE 668
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ ++ N V++S+++ +++ L ++K M G+ D+ Y L+ G
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A E+Y E + AKG++ D+ TYS ++ + + A K+ EDM +TP
Sbjct: 729 LLFASELYAE---MLAKGIMP-DLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVF 784
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++LI G +++A L EML G P+ +IL+ V+
Sbjct: 785 IYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++C + F +K D+V+A + ++ SPN + ++I + + +++ +
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + ++ ++ +L++ + L F E+Y M G+M D+ +Y++L+ C G
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
AQ+I ++ + + VF Y+T++ Q A ++ +ML G+ P+ T
Sbjct: 765 ENAQKILEDMD----RKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820
Query: 401 WSSLINACANAG 412
+ L+N G
Sbjct: 821 YDILVNGKVKDG 832
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 56/344 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++K+M+ +G D ++N+LL +G E+Y E+ K D TY+ +
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP----DAITYNIV 864
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + AL D++S+ P T+ LI+ A G +E+AM LFEEM GC
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN NIL+ + + A +LF+ R+ N
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFK--------------------RMVNE------- 957
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+P +Y IL+ C +AL NE+++ GL P+
Sbjct: 958 --------------------GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +I+ G S +E AL + MR G+ PD+ Y + + + ++QA ++E
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
E++ ++P++ TY L+R Y + VY++M G
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG---YSLSENPEHAYTVYKNMMVDG 1098
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 204/493 (41%), Gaps = 84/493 (17%)
Query: 225 CNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CNF+ EF + D V + A ++ +K + ++ TI I G + + +R
Sbjct: 125 CNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LN Y +N L++ + + LEVY+ M G+ + +Y+ L+ A G
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKKR 241
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
++ + +K +E G L+ +V+T++ ++V A A ++ M G P+ +T+
Sbjct: 242 DSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300
Query: 402 SSLINACANAGLVEQAMHLF-----------------------------------EEMLQ 426
+ LI+A NAG +E A LF +M
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD-----RISN 481
G P+ IL+ +A FD AF F + + Q L + NT R
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATF---DVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 482 MEHKDKQSITNTPNFV---PNSH-YSSFDKRFS--------------FKPTTTTYNILMK 523
+E D + +T V P ++ Y +F F K NI+
Sbjct: 418 IE--DALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIV-- 473
Query: 524 ACCTDYYRV---------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
AC Y + K + N +R GL+P+ +++ +++ G V+ A+ +L M
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+G PDV+ + I ++ R+ +A+ +F+ MK ++ P +VTY TLL + G
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG-- 591
Query: 635 HEVQQCLAVYQDM 647
VQ+ + +++ M
Sbjct: 592 -RVQKAIELFESM 603
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 23/292 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + + + A + +DM + G P+ T++ L+ +G + + L++EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
+ C+P++ NI++ + ++ D+A F S T G DG ++
Sbjct: 850 ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG-LAKVGR 908
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+E + F S Y KP +NIL+ D L M
Sbjct: 909 LEEAMRL-------FEEMSDYGC-------KPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL+D +G V+ AL ++ G+ PD +AY I +S+R+
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A +L+ EM++ I P+L TY +L+ G V+Q +Y+++ AG
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM---VEQAKRMYEELQLAG 1063
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 22/322 (6%)
Query: 336 LAGNTVLAQEIYGEV---KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
L G T++ E+ + + L G+ + D F +V+V K A ++ +
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIFDKFTKK 781
Query: 393 -GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G++P +++ LI E+A LF++M GC P++ N+LL ++ +
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F L++ + + D T I ++ +F + S F
Sbjct: 842 LFELYKEMISRRCKP------DAITYNIVISSLAKSNNLDKALDFFYDLVSS------DF 889
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT TY L+ A L EM G PN + ILI+ G G+ E A Q
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M +G+ PD+ +YT + + R+ +A F E+K + P+ + Y ++
Sbjct: 950 LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING-- 1007
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G +++ LA+Y +M G
Sbjct: 1008 -LGKSQRMEEALALYNEMRNRG 1028
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 188/459 (40%), Gaps = 47/459 (10%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ L C +R G+ D AL+ D + P Y T ID G G+ K+ +E
Sbjct: 406 NTLICGLLRA-GRIED---ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE 461
Query: 281 DLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ + NI N+ + A L+ ++ +++ G+ D +YN+++K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA----KWWQMALKVKEDMLSAGV 394
A + E+ + + DV ++++ A + WQM ++K+ LS
Sbjct: 522 QVDEAVNLLSEM----IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS--- 574
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +T+++L++ G V++A+ LFE M+ C PN+ N LL + + + A +
Sbjct: 575 -PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALK 633
Query: 455 LFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVP 498
+F T L+ V G + + H+ K+S+ T P V
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVK 693
Query: 499 NSHYS-------SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHI 549
F + F+ + + LM + KA++ E+ G+
Sbjct: 694 CGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753
Query: 550 SWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
L+ A QI K ++ G+SP + +Y I + ++A+ LF++
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK+ P+ T+ LL + G + E+ +Y++M
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITEL---FELYKEM 849
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 10/246 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI--CGDYMKSRAIY 279
+ F V K RD A +D +K PN++ T+I CG+ G + +
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGLLRAGRIEDALKLL 425
Query: 280 EDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + S V Y + + ++ + + +E ++ M+ G++ ++ + N L +
Sbjct: 426 DTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ ++ + L D TY+ ++K ++ A+ + +M+ G P+
Sbjct: 486 GRLREAKTMFNGLR----ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
I +SLI++ AG V++A +F+ M P N LL + + +A LF
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 458 SWTLSK 463
S K
Sbjct: 602 SMIXKK 607
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + +GK D +A + + P++ ++D + G ++ + +L
Sbjct: 930 IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + +N ++N + ++ L +Y M+ G++ D+ +YN L+ LAG
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ +Y E L+ G L+ DVFTY+ +++ ++ ++ + A V ++M+ G PN T
Sbjct: 1050 EQAKRMYEE---LQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 401 WSSLIN 406
++ L N
Sbjct: 1106 YAQLPN 1111
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 52/294 (17%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ +V T+S ++ V +++AL V DM +AG N +T+++LI+ +G E+A+
Sbjct: 322 IERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEAL 381
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ E+M + +P ++ N L+ AC + Q+ A R++ S
Sbjct: 382 AVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAAS---------------- 425
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
S P TTTYN L+ A D +V A+
Sbjct: 426 -------------------------------SHPPNTTTYNALISAHSKGGDLPKVLAVF 454
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G + I+++ LI AC +G + ALQ+ + MR +G P+V++Y + I C +
Sbjct: 455 KEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQG 514
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ ++A +FE+M+ +P++V+Y L++A R G + ++ LA +++M +A
Sbjct: 515 AQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGG---QWRRALAAFEEMIRA 565
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
N+ T+IDV G G + ++ A+ E ++ + + FN+LM ++ + L VY
Sbjct: 360 NVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVY 419
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + +YN L+ A G+ ++ K + KG + V TYS+++
Sbjct: 420 EQMAASSHPPNTTTYNALISAHSKGGDL---PKVLAVFKEMVQKGCER-SVITYSSLISA 475
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A W++AL++ E+M G PN I+++SLI ACA E+A +FE+M + GC P+
Sbjct: 476 CEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPD 535
Query: 433 SQCCNILLQACVEACQFDRAFRLF 456
L+QA Q+ RA F
Sbjct: 536 VVSYTALIQAYERGGQWRRALAAF 559
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +GK AL + K+ P T++ C + ++ +YE
Sbjct: 362 VTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQ 421
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N +N+L++ ++ DL L V+K M + G + +Y+ L+ AC AG
Sbjct: 422 MAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGE 481
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA +++ E++ +G + +V +Y++++ A W+ A +V E M G P+ +
Sbjct: 482 WKLALQLFEEMR---GEGCVP-NVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVV 537
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILL 440
++++LI A G +A+ FEEM++A C P+S N ++
Sbjct: 538 SYTALIQAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTII 579
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 55/373 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTY 621
+K I+ + V Y
Sbjct: 557 IKDTTIRSDAVLY 569
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 319 PNVVCYNTVLK--GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + + G K + +Y+ +
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMSSCGC-KPNTVSYTIV 432
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + + A L T+ + +A +G +++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M K + + + N+ SS KR+ TD R M +
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWE----------------TD--RAIDFFAYMVS 594
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++T+LI G + A ++L
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 121/321 (37%), Gaps = 56/321 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
T+L+ E ++ L+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS 345
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 55/373 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTY 621
+K I+ + V Y
Sbjct: 557 IKDTTIRSDAVLY 569
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 319 PNVVCYNTVLK--GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + + G K + +Y+ +
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMSSCGC-KPNTVSYTIV 432
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + + A L T+ + +A +G +++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M K + + + N+ SS KR+ TD R M +
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWE----------------TD--RAIDFFAYMVS 594
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++T+LI G + A ++L
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 121/321 (37%), Gaps = 56/321 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
T+L+ E ++ L+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS 345
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 182/437 (41%), Gaps = 66/437 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF + D ALR + ++ P +I +I + G G K I+ED+
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + ++ +L + M+K V ++ +YN +L AC G
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGG-- 166
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LD W+ L + M G+ P+ IT
Sbjct: 167 --------------------LD----------------WEGLLNLFAQMRHEGIQPDLIT 190
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++AC++ GLVEQA +F+ M ++G ++ L+ + Q R L R
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM- 249
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK--RFSFKPTTT 516
ED +GN+ I+ S+ N H ++ F + R P
Sbjct: 250 ---------ED-EGNSPDIAGY-----NSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVE 294
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ + +V++L ++M+ + P ++ LI G G + ++ + M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y+ + VC R ++A + + M + P+L L+ S YG +
Sbjct: 355 VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLI---SSYGKM 411
Query: 635 HEVQQCLAVYQDMWKAG 651
+ L Y + +AG
Sbjct: 412 AMYKDALVSYYRIREAG 428
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 11/226 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T++ + G G + + R+++ D++ + + +NSL+ V F ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M GV D A+Y+ LL C G T A +I+ + E+ L+ + ++
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEAS----AGLI 405
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL + AG+ P + +LI A GL +A M +AG +
Sbjct: 406 SSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
N +++A + D A F S+ Q G + D T
Sbjct: 466 APVSSVNSVMEAYSKVGLHDEALEFF-----SELQQKEGSEVDERT 506
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
+SP++ ++I+ G+ + +++ ++ ++ +++L+ + + F
Sbjct: 254 NSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVR 313
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ +M++L +A+YN L++ + G QE + GV K D TYS +
Sbjct: 314 SLFSDMKELSTPPTVATYNSLIQ---VFGEGGYFQESINLFHDMVDSGV-KPDDATYSAL 369
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V + A K+ + ML+ TP+ + LI++ + + A+ + + +AG
Sbjct: 370 LSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGL 429
Query: 430 EPNSQCCNILLQA 442
+P + L+Q
Sbjct: 430 DPQVSAYDALIQG 442
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMA 325
GD +R+++ ++ T +I +NSL ++ H L + +++ M+ D+
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSL--IDGHGKLGLLDECICIFEQMKDADCDPDVI 326
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A E E+K A G LK +V TYST + F Q A+K
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMK---ANG-LKPNVVTYSTFIDAFCKEGMLQEAIKF 382
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM +TPN T++SLI+A AG + +A+ L EE+LQAG + N LL E
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 442
Query: 446 ACQFDRAFRLFRSWTLS------KTQVAL------GEDYDGNTDRISNMEHKDKQ----- 488
+ A +FR+ + +T AL ++ + D + M+ K +
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 502
Query: 489 ------SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
+ N K Y LM A +A L+ EM
Sbjct: 503 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 562
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+GL +++ LID SG V+ A+ M E G+ P+V YT + ++ +
Sbjct: 563 DLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFE 622
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A LF+EM + P+ + Y L+ ++G+L E
Sbjct: 623 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 658
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 189/437 (43%), Gaps = 40/437 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
FC F R + A K + PN+ T ID C + M AI + D
Sbjct: 335 FCKFER-------MPKAFEFLHEMKANGLKPNVVTYSTFID--AFCKEGMLQEAIKFFVD 385
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R +T N + + SL++ N A +L L++ + + + G+ ++ +Y LL C G
Sbjct: 386 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++ + + GV + TY+ +V F AK + A + ++M + P+ +
Sbjct: 446 MKEAEEVF---RAMLNAGVAP-NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 501
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +++ N +E+A L E+ ++G N+ L+ A ++ Q A L
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Query: 460 T---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
L T+V DG + + H+ +P
Sbjct: 562 LDLGLIATEVTYCALIDG---------------LCKSGLVQEAMHHFGRMSEIGLQPNVA 606
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y L+ C + + K L +EM G+ P+ I++T LID GN++ AL + M
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E GM D+ AYT I S ++++A +L +EM + P+ V Y+ L++ +Y +L
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK---KYYAL 723
Query: 635 HEVQQCLAVYQDMWKAG 651
+V + L + +M K G
Sbjct: 724 GKVDEALELQNEMAKRG 740
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 53/320 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M+K V S N LL G L+++ + K + A G+ K VFTY+ +
Sbjct: 206 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF---KDMGAAGI-KRSVFTYNIM 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +MA + M AG TP+ +T++SLI+ GL+++ + +FE+M A C
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ C+F+R + F H+ K +
Sbjct: 322 DPDVITYNALINC---FCKFERMPKAFE------------------------FLHEMKAN 354
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
KP TY+ + A C + +A+ +MR V L+PN
Sbjct: 355 --------------------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++T LIDA +GN+ AL++++ + + G+ +VV YT + R+K+A +F
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M + + PN TY L+
Sbjct: 455 AMLNAGVAPNQETYTALVHG 474
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 214/558 (38%), Gaps = 128/558 (22%)
Query: 114 EMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPL-----ELFDGSGFKL 157
+M A+GI +S+ +EG ++ + ++ E G P L DG G
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 304
Query: 158 LKNEC----QRLLDSG---EVEMFVGLMEVLEEF-RLP-VKELDEEFRIVQLCVNKPDVN 208
L +EC +++ D+ +V + L+ +F R+P E E + L KP+V
Sbjct: 305 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL---KPNV- 360
Query: 209 LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
+ + F+ F K+ L A++ + ++ +PN + ++ID
Sbjct: 361 -------------VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----------------------------- 299
G+ ++ + E++ + LN+ + +L++
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 300 --------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ A ++++ ++ K M++ + D+ Y +L C A+ + GE+K
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + + Y+T++ + + AL + E+ML G+ +T+ +LI+ +
Sbjct: 528 ----ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
GLV++AMH F M + G +PN L+ + F+ A +LF L K +
Sbjct: 584 GLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE-MLDKGMMPDKIA 642
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
Y D NM+H + Q N
Sbjct: 643 YTALID--GNMKHGNLQEALN--------------------------------------- 661
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L + M +G+ + ++T LI SG V+ A +L M G+ PD V Y IK
Sbjct: 662 ---LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718
Query: 592 VCVRSKRLKQAFSLFEEM 609
++ +A L EM
Sbjct: 719 KYYALGKVDEALELQNEM 736
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
K + TYNI++ C D ++L +M+ G +P+ +++ LID G G ++ +
Sbjct: 252 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECIC 311
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I + M++ PDV+ Y I + +R+ +AF EMK ++PN+VTY T + A
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371
Query: 630 RYGSLHEVQQCLAVYQDM 647
+ G L Q+ + + DM
Sbjct: 372 KEGML---QEAIKFFVDM 386
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 52/273 (19%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
++ K +DM +AG+ + T++ +I+ G +E A LF +M +AG P+ N L+
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ D +F D + D
Sbjct: 298 DGHGKLGLLDECICIFEQMK------------DADCD----------------------- 322
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
P TYN L+ C KA ++EM+ GL PN ++++ IDA
Sbjct: 323 ------------PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 370
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A++ MR ++P+ YT+ I ++ L +A L EE+ I+ N+
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV 430
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY LL G + E ++ V++ M AG
Sbjct: 431 VTYTALLDGLCEEGRMKEAEE---VFRAMLNAG 460
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+MR + P S L+ G + + + K M G+ V Y I +
Sbjct: 210 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 269
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L+ A SLF +MK P++VTY +L+ + G L E C+ +++ M A
Sbjct: 270 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE---CICIFEQMKDA 319
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 176/411 (42%), Gaps = 36/411 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L + + ++ K P++ T+ID GD ++R ++ + S+ N+
Sbjct: 93 KSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV 152
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ L+N + E+ + M + V+ ++ +YN L C T A E+
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212
Query: 349 EVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ G L++ D T+ST++ K Q +DM++ G PN +T+++L+N
Sbjct: 213 SLR----DGSLRVSPDTVTFSTLIDGL--CKCGQTDEACNDDMIAGGYVPNVVTYNALVN 266
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSK 463
A +E+A + E M+ G P+ ++L+ A +A + D A L S +
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326
Query: 464 TQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V DG +DR S + + N P T+NIL
Sbjct: 327 NVVTFNSIIDGLCKSDR-SGEAFQIALQVYNR----------------MLVPDKVTFNIL 369
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C ++ + AL EM + P+ +++ LID +G VE A IL +M G+
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
P+VV Y + +S R+++ EEM P +TY +L+ A R
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 309 LEVYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+++ M + GV + +YN ++ C + E++ E+ K DV TY+
Sbjct: 65 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL----VKRGHHPDVVTYN 120
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ A + A ++ M S G PN +T+S LIN G +++A L +EM +
Sbjct: 121 TLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 180
Query: 428 GCE--PNSQCCNILLQA------CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
C+ PN N L EAC+ R+ R S +S V DG
Sbjct: 181 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCG 239
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
E + I +VPN TYN L+ C R A++
Sbjct: 240 QTDEACNDDMIAG--GYVPN---------------VVTYNALVNGLCKADKMERAHAMIE 282
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M G++P+ I++++L+DA + V+ AL++L M G +P+VV + + I +S
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
R +AF + ++ + + P+ VT+ L+ + G+ +Q A++++M
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNF---EQASALFEEM 389
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 16/327 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+A YNI+L++ C AG T A EI+ GE+ A+ + + TY+TI+ +
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEM----ARDGVAPTIVTYNTIINGLCKSNELGAG 100
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+++ E+++ G P+ +T+++LI++ AG +E+A L M GC PN ++L+
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L + T V Y+ D + KQS+T + S
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC------KQSMTAEACELMRSL 214
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D P T T++ L+ C +A ++M G PN +++ L++ +
Sbjct: 215 R---DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKA 271
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+E A +++ M + G++PDV+ Y+ + ++ R+ +A L M PN+VT+
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331
Query: 622 ITLLRARSRYGSLHEV-QQCLAVYQDM 647
+++ + E Q L VY M
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRM 358
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 164/400 (41%), Gaps = 32/400 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLR--SQNVTLNIYVFNSLMNVNAHDLKFTL 309
PN+ + +D G+C M + A + LR S V+ + F++L++ +
Sbjct: 186 PNIITYNSFLD--GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+M G + ++ +YN L+ C A + + ++ + KGV DV TYS +
Sbjct: 244 ACNDDMIAGGYVPNVVTYNALVNGLCKADKM---ERAHAMIESMVDKGVTP-DVITYSVL 299
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F A AL++ M S G TPN +T++S+I+ + +A + ++
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML 359
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKD 486
P+ NIL+ +A F++A LF Q + G DG +D
Sbjct: 360 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVG 543
+ PN TYN+L+ C R++ + EM + G
Sbjct: 420 ILDLMGNLGVPPN---------------VVTYNVLVHGLCKS-GRIEEPCEFLEEMVSSG 463
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P +++ L+ A + + ALQ++ ++ G PD V Y + +S + +QA
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
++ EEM QP+ T+ R G+L + L V
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRV 563
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 127/313 (40%), Gaps = 63/313 (20%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + S+ T N+ FNS+++ + + L+VY M ++ D ++NIL+
Sbjct: 315 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNILI 370
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AGN A ++ E + AK ++ DV T+ ++ A + A + + M +
Sbjct: 371 AGACKAGNFEQASALFEE---MVAKN-MQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV PN +T++ L++ +G +E+ EEM+ +GC P S L+ A A + D
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +L K F +
Sbjct: 487 ALQLVSKL-----------------------------------------------KSFGW 499
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P T TYNIL+ +A+ + EM G P+ ++ SGN+ G ++
Sbjct: 500 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559
Query: 570 ILKIMREDGMSPD 582
+L+++ GM PD
Sbjct: 560 LLRVVLAKGMLPD 572
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 44/388 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP+ T+ID G+C A +D+ + N+ +N+L+N A ++
Sbjct: 222 SPDTVTFSTLID--GLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M GV D+ +Y++L+ A C A A E+ + + ++G +V T+++I+
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL---LHGMASRGCTP-NVVTFNSII 335
Query: 371 ----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
K + +Q+AL+V ML P+ +T++ LI AG EQA LFEEM+
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQASALFEEMVA 391
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+P+ L+ +A Q + A + D GN N+ +
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDIL--------------DLMGNLGVPPNVVTYN 437
Query: 487 -------KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
K P SS P + TY L+ A C AL ++
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSS-----GCVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
++++ G P+ +++ IL+D SG E A+ +L+ M G PD + RS
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L L + + P+ T ++L
Sbjct: 553 NLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I + G C G++ ++ A++E++ ++N+ ++ F +L++ A ++ ++ M L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Query: 319 GVMADMASYNILLKACCLAG--------------------NTVLAQEIYGEVKHLEAKGV 358
GV ++ +YN+L+ C +G + +Y +
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487
Query: 359 LKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
L+L D TY+ +V + + A+ V E+M+ G P++ T+++
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+G + M L +L G P++ C+ +L
Sbjct: 548 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 193/457 (42%), Gaps = 40/457 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRAD------------------ILFCNFVREFGKKR 235
EF V +C N N+ I + C + R + I + + + +
Sbjct: 659 EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG 718
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN Y +II + C IC ++ + ++ Q + + V+
Sbjct: 719 ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC-KLAEAEEAFSEMIGQGILPDTIVY 777
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 834
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G L+ D+ T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 835 MLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 943
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K ++ +K+A+ LF+EMK ++ TY L++
Sbjct: 1062 KGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 174/398 (43%), Gaps = 36/398 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIV 675
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G A + + +E KG DV +YST++ + K+ E M
Sbjct: 676 IHFVCQLGRINEAHHL---LLLMELKGYTP-DVISYSTVINGYCRFGELDKVWKLIEKMK 731
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ T+ S+I + +A F EM+ G P++ L+ +
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + IT T
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE-- 849
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ EM +QP +VT+ L+ +G L + ++ L
Sbjct: 970 EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 170/395 (43%), Gaps = 59/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I++ V F K+ D+ +A + + +P++ II G C GD +++ ++
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS--GFCQIGDMVEAGKLF 832
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + + +I F LMN A +K V+ +M + G ++ +Y L+ C
Sbjct: 833 HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ A E+ E+ + L+ ++FTY++IV + + A+K+ + +AG+ +
Sbjct: 893 GDLDSANELLHEMWKIG----LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 948
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+T+++L++A +G +++A + EML G +P N+L+ + +L
Sbjct: 949 TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL- 1007
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+W L+K P TT
Sbjct: 1008 NWMLAK----------------------------------------------GIAPNATT 1021
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+K C + A+ +M + G+ P+ ++ L+ + N++ A + + M+
Sbjct: 1022 FNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMK 1081
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G S V Y+ IK + K+ +A +F++M+
Sbjct: 1082 GKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ E VG+ N S+ I+I G + A +L +M G +PDV++Y+T I
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R L + + L E+MK ++PN TY +++ R L E ++ +
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS 763
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 190/428 (44%), Gaps = 43/428 (10%)
Query: 221 DILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
+++F N + + + KK DL A R ++ K P + +ID G C G +
Sbjct: 239 NVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALID--GFCKAGKFQVVDQ 296
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLK 332
+ ++ + +N+ VFNS+++ K+ L E+ + M ++G D+ +YNIL+
Sbjct: 297 LLNEMNVMGLNVNVKVFNSIIDAK---YKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G A+E K + L + F+Y+ ++ + + MA + +
Sbjct: 354 FSCSGGRIKEAEEFLERAK----ERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAET 409
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ +++ + I+ G ++ A+ + E+M++ G P++Q N+L+ + +F A
Sbjct: 410 GDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAA 469
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--- 509
++ L E D N++ T F+ N+ + F
Sbjct: 470 ------------KLLLSEMLD------LNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
P YN+++K C A+ +N+M+ +P+ + + +ID ++
Sbjct: 512 MSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDL 571
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL++ M + P+VVAYT+ I + + +A +F M+ + ++PN+VTY L
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631
Query: 625 LRARSRYG 632
+ S+ G
Sbjct: 632 IGGFSKTG 639
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + ++ YN+++ C G+ A ++ E+K KG L + TY ++ F A
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELK---LKGFLP-TLETYGALIDGFCKAGK 290
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+Q+ ++ +M G+ N ++S+I+A GLV++A + M + GCEP+ NI
Sbjct: 291 FQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNI 350
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ +++ S ++ E++ +E ++++ +P
Sbjct: 351 LI-----------------NFSCSGGRIKEAEEF---------LERAKERTL------LP 378
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
N +FS+ P LM A C DY ++ ++ G P+ +S+ I
Sbjct: 379 N--------KFSYTP-------LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G ++ AL + + M E G+ PD Y + + R A L EM +QP
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAV 643
+ Y TL+ R L + + V
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEV 510
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 130/329 (39%), Gaps = 26/329 (7%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV----FTYSTIVKVFADAKWWQMAL 383
N LL G +A E+Y K LE G LD+ ++ +VK D +
Sbjct: 168 NSLLNCLVKNGKVDVACELYD--KMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGR 225
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K+ +D G PN + ++ +I+ G +++A +FEE+ G P + L+
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF 285
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSH 501
+A +F +L + V + ++ N ++ K K + + +
Sbjct: 286 CKAGKFQVVDQLLNEMNVMGLNVNV---------KVFNSIIDAKYKYGLVDKA-----AE 331
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDAC 558
+P TTYNIL+ C+ R+K + + L PN S+T L+ A
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGG-RIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+ A +L + E G PD+V+Y I V + A + E+M + P+
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDM 647
Y L+ + G + L+ D+
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDL 479
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G + ++ + ++ N+ + Y++ +L++ + ++L E+++ + G+
Sbjct: 459 GLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDP 518
Query: 323 DMASYNILLKACCLAGNTVLAQE--------------------IYGEVKHLEAKGVLKL- 361
+ YN+++K C G A I G VK + LK+
Sbjct: 519 GVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMF 578
Query: 362 ----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+V Y++++ F A KV M S + PN +T++ LI +
Sbjct: 579 GQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKT 638
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
G E+A FE ML C PN + L+
Sbjct: 639 GKPEKAASFFELMLMNNCLPNDTTFHYLING 669
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 453 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 512
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 513 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 568
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 569 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 628
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 629 DIGKAFEYF-------TKI----------------------------------------K 641
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 701
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 702 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 761
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +C +++M AG
Sbjct: 762 KGWARVSLPDRALKC---FEEMKLAG 784
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 515 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 575 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 634
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK------------------ 386
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 635 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 690
Query: 387 -------------EDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 691 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 750
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 751 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 783
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 611 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 670
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 671 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGVPP-NIHTYTSYI 726
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 727 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 786
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 787 PDEASYHCLVTS 798
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 621 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 680
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 681 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 740
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 741 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 796
Query: 406 NA 407
+
Sbjct: 797 TS 798
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 59/341 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 288 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 346
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L R + E
Sbjct: 347 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE---------MEE 397
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 398 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 451
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 452 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 511
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 512 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 571
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P ++TY L+ R H+VQ+ ++V M AG
Sbjct: 572 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAG 609
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 381 QSGNMERAEE 390
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 189/416 (45%), Gaps = 68/416 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ + R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSSAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V EDM+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH +Q + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEQLV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR +G +P+ +++T++ID+ G + A ++L+ M + G+ P ++A++ I
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R A + F+ M ++P+ + Y+ +L +R G + ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG---DTEKMLCLYRKM 529
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 150/354 (42%), Gaps = 32/354 (9%)
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
QN L Y+ L + A +V+ +MQ +G+ A + Y ++ C G A
Sbjct: 673 QNCNLYEYLITCL--IEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAH 730
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + + + L++ + I+ + + K WQ A + + + A I W++
Sbjct: 731 RLMDDA----LQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRI-WNA 785
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-----S 458
LI+A A +GL E+A +F+ M++ G P N +++A + + D + + +
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMN 845
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ +SK+ V L D + E + ++PN H Y
Sbjct: 846 FKISKSTVLLLLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL---------------Y 888
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ C + V+ ++ EM G P+ L++ +GN + Q+ + + E
Sbjct: 889 RSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE 948
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++
Sbjct: 949 AGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK 1002
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S++++ H +F +E+ M+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D+A N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSI--LEAG--LEPDEDTYNTLIVMYCRSFRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA +FEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ A +A L + + + T + + ++ +++ N N
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN------N 1085
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SS + S P +T ++ +K DY + EM+ G+ P+H WT I A
Sbjct: 1086 LKSSSLE--VSTLPYSTVFDAYLKN--GDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAAS 1141
Query: 560 GSGNVEGALQILKIMREDG 578
A+ +LK +++ G
Sbjct: 1142 LCEQTADAILLLKSLQDCG 1160
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 150/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGKIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G E+Y V+ L+ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMN-FKISKSTVLLLLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+I+ + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++RS +
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEA----------------------------- 949
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + + L+NEM GL+P
Sbjct: 950 ------------------GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A QI + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G E + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVL 1083
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/612 (21%), Positives = 246/612 (40%), Gaps = 117/612 (19%)
Query: 96 SVVVSEGNVSKFASMLSL--EMVASGIVKSI-----------REGRIDCVVGVLKKLNEL 142
++++ G+V KF SL G + S+ R+G+++ + +L+ + ++
Sbjct: 347 TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KM 405
Query: 143 GVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV 202
AP + + + +L + L +GE+E + + + ++E L + I +LC
Sbjct: 406 DAAP----NLTSYNILID---MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCK 458
Query: 203 NKP-----DVNLAIRYACIVPRADILFCNFVREFGKK----------------------- 234
+ + L + + P + + FC+ + G+
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDS-VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAV 517
Query: 235 ------RDLVSALRAYDASKKHLS------SPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
R+ R D K + SP++ + +D G+ K RA++E++
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI 577
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q +T ++ ++ L++ V K T +++ M++ G+ D +YNI++ C +G
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKV 637
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A ++ E+K KG L+ V TY +++ A A + E+ S V N +
Sbjct: 638 NKAYQLLEEMK---TKG-LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVV 693
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+SSLI+ G +++A + EE++Q G PN+ N LL A V+A + D A F+
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ--- 750
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
NM K P TY+I
Sbjct: 751 --------------------NM------------------------KNLKCPPNEVTYSI 766
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + + EM+ GL PN I++T +I GNV A + + + G
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD Y I+ + + A+ LFEE + + T + LL A + L +
Sbjct: 827 GIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAA 886
Query: 639 QCLAVYQDMWKA 650
AV ++M K+
Sbjct: 887 IVGAVLREMAKS 898
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 57/352 (16%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
AH+ L + + MQ++G + + L+ G A + E+K
Sbjct: 215 AHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK----SNSFNA 270
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D+ Y+ + F MA K ++ S G+ P+ +T++S+I A V++A+ LF
Sbjct: 271 DLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELF 330
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EE+ P N ++ +F+ A+ L
Sbjct: 331 EELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER----------------------- 367
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EM 539
KR P+ YN ++ C +V+ + E
Sbjct: 368 ------------------------QKRKGCIPSVIAYNCIL-TCLGRKGKVEEALRILEA 402
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ +PN S+ ILID +G +E AL++ M+E G+ P+++ I +++RL
Sbjct: 403 MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A S+F + H P+ VT+ +L+ R+G +V +Y+ M +G
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHG---KVNDAYMLYEKMLDSG 511
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E QIL+ M G P + V+S++L++AF + E M+ ++ +P Y
Sbjct: 147 NLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYT 206
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TL+ A S + HE L + + M + G
Sbjct: 207 TLIGALS---AAHEADPMLTLLRQMQEIG 232
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 197/438 (44%), Gaps = 35/438 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL + K +P+ T++D+ G++ ++ A++ D+ ++ + Y FN+++N
Sbjct: 448 ALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMIN 507
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E + M++LG D +Y L+ C GN +E + + +E +
Sbjct: 508 GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV---EEAFKVKEKMEKEA 564
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+L + Y++++ +K + + + +M G++PN +T+ +LI + G +++A
Sbjct: 565 ILP-SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY----- 472
+ +M++ G PN C+ ++ + + D A L + + V L Y
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK--MVNLDVFLDHGYFDRLH 681
Query: 473 ---DGNTD--RISNMEHKDKQSITNTPNFVPNSHYSSF---------DKRFS------FK 512
DGN D +I++ + +S + + V N + K FS F
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741
Query: 513 PTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY L+ + + +L +EM GL+PN I++ LI+ SGN++ A ++
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ G++P+V++Y I ++ ++A L +M I P+L+TY L+ +
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861
Query: 631 YGSLHEVQQCLAVYQDMW 648
G + + L ++++
Sbjct: 862 QGDMGKATNLLDEMRELF 879
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 195/462 (42%), Gaps = 65/462 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
+K + +A+ YD + P+++ C +++ C D + A+ +++ LN
Sbjct: 195 RKGESSNAILVYDHINRLGIVPDVFTCSIMVN--AYCKDGWVNVAVDFVKEMDYLGFELN 252
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +NSL++ V+ D++ V K M + G++ + + +L+K C A+++
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--------------- 393
E++ E + LD + Y ++ + A++++++ML+ G
Sbjct: 313 EMERSEG---MVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGY 369
Query: 394 --------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ P + ++S+L++ GLV +A+ ++ EML+ G + N
Sbjct: 370 CKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNV 429
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLS-KTQVALGE-DYDGNTDRISNMEHKDKQSIT 491
N LL+ F+ A + W L K V E Y D + M
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHV---WHLMLKRGVTPDEVSYCTLLDLLFKM--------- 477
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
F + ++ R + +T +N ++ C ++A N M+ +G P+ +
Sbjct: 478 -GEFFRALALWNDILAR-GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGV 535
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LID GNVE A ++ + M ++ + P + Y + I +SK+ ++ L EM
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN+VTY TL+ G L + Y DM + G
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRL---DKAFTAYFDMIEKG 634
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 105/478 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P Y T++D G C + + ++AI Y ++ + N+ NSL+ + L
Sbjct: 392 PESYSYSTLMD--GFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 310 EVYKNMQKLGVMADMASY-----------------------------------NILLKAC 334
V+ M K GV D SY N ++
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509
Query: 335 CLAGNTVLAQEIYGEVKHL--EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE----- 387
C + A+E + +K L E GV TY T++ + + A KVKE
Sbjct: 510 CKMEKMIEAEETFNRMKELGFEPDGV------TYRTLIDGYCKLGNVEEAFKVKEKMEKE 563
Query: 388 --------------------------DMLS----AGVTPNTITWSSLINACANAGLVEQA 417
D+LS G++PN +T+ +LI + G +++A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ +M++ G PN C+ ++ + + D A L + + V L Y D
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK--MVNLDVFLDHGY---FD 678
Query: 478 RISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
R+ + + D Q I +T + K FS P + YNI + C K
Sbjct: 679 RLHKADDGNLDSQKIADTLD--------ESSKSFSL-PNSVVYNIAIAGLCKSGKVDDAK 729
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + + G SP++ ++ LI +GNV A + M + G++P+++ Y I
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S L +A LF+++ + PN+++Y L+ + G+ E L + M K G
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREA---LDLRNKMLKEG 844
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 179/470 (38%), Gaps = 110/470 (23%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSR 276
R+ F + F K ++ A ++ K+ P+ RT+ID G C G+ ++
Sbjct: 497 RSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLID--GYCKLGNVEEAF 554
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ E + + + +I ++NSL+ ++K+ + VM LL CL
Sbjct: 555 KVKEKMEKEAILPSIELYNSLIG----------GLFKSKKTREVMD-------LLSEMCL 597
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G L +V TY T++ + D A DM+ G P
Sbjct: 598 KG--------------------LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAP 637
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEML------------------------------- 425
N I S ++++ G +++A L ++M+
Sbjct: 638 NVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTL 697
Query: 426 ----QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYD-- 473
++ PNS NI + ++ + D A ++F S L T L Y
Sbjct: 698 DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAA 757
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DY 529
GN N +S D+ + P TYN L+ C +
Sbjct: 758 GNV----------------------NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNL 795
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
R + L +++ GL+PN IS+ ILID +GN AL + M ++G+SP ++ Y+
Sbjct: 796 DRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSAL 855
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
I + + +A +L +EM+ N+ ++ L+ + G + ++ +
Sbjct: 856 IYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAK 905
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 137/357 (38%), Gaps = 71/357 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K L V+ NM KLG + + S N LL + G + A +Y + L
Sbjct: 164 IKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRL----------- 212
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G+ P+ T S ++NA G V A+ +EM
Sbjct: 213 ----------------------------GIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM 244
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISN 481
G E N N L+ CV +RA +L + + +V L G R
Sbjct: 245 DYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYC-RQCK 303
Query: 482 MEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKA 534
+E +K + + + V + + Y +L+ C D R++
Sbjct: 304 LEEAEKVLREMERSEGMVLDEY---------------AYGVLIDGYCRVCKMDDAVRLR- 347
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+EM VGL N LI+ +G V A ++L M + + P+ +Y+T +
Sbjct: 348 --DEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFC 405
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R + +A S++ EM IQ N+VT+ +LL+ R G+ + L V+ M K G
Sbjct: 406 REGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAF---EDALHVWHLMLKRG 459
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W ++V ED +P + ++ G+++ A+H+F+ M + GC P+ + CN
Sbjct: 134 WNELVRVFEDF---KFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNR 188
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL + V + A ++ LG D T I + + +FV
Sbjct: 189 LLSSLVRKGESSNAILVYDHIN------RLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVK 242
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
Y F+ TYN L+ C + D R + ++ M G+ N ++ T+LI
Sbjct: 243 EMDY------LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296
Query: 557 ACGGSGNVEGALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+E A ++L+ M R +GM D AY I R ++ A L +EM + ++
Sbjct: 297 GYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR 356
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
NL L+ + G + E ++ L
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLL 382
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 176/440 (40%), Gaps = 49/440 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ RT++ + + I + ++ N +FNSL++ NA D + ++
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 312 YKNMQKLGVMADMASYNILLKACC---------------------LAGNTVLA------- 343
+ M G +YNI + + C LA + VL
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 344 ----------QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
++ + +K + KG + D TY+ ++ AK + + + ++M AG
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVP-DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ T++ LI++ AGL+EQA F+EM GC PN LL A +++ Q +A
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKR 508
+F + Y D + K + + T V + Y +
Sbjct: 543 DIFHR-MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDT 601
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TY L+ C A L++ M G PN I + LID G ++
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDN 661
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ M + G P V YT+ I + RL A + EM + PN+VTY ++
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721
Query: 627 ARSRYGSLHEVQQCLAVYQD 646
S+ G + + L++ ++
Sbjct: 722 GLSKVGEIEKALNLLSLMEE 741
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 193/469 (41%), Gaps = 61/469 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA----- 277
LF + V + D A + ++ SP Y+ I + ICG A
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTT-CGSPPGYVAYNIF-IGSICGQEELPNAELLDL 400
Query: 278 ---IYEDLRSQNVTLN-IYVFN---SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YE++ + + LN + N L V + F ++ K M + G + D ++Y +
Sbjct: 401 VEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAF--QILKEMMRKGFVPDTSTYTKV 458
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C A + ++ E+K + + DV+TY+ ++ F A + A ++M
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMK----RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN +T+++L++A + + QA +F M+ A C PN+ + L+ +A +
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQ 574
Query: 451 RAFRLFR-------------------SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQS 489
+A ++ + T++ V G DG ++S+
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634
Query: 490 ITN--TPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYR 531
+ PN V ++ F K + + P+ TY L+ D
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694
Query: 532 VKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
A+ ++EM +PN +++T +ID G +E AL +L +M E G SP+VV YT
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I ++ + + LF++M PN VTY L+ G L E
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAH 803
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V +A ++ V K M G D ++ +A C G + +
Sbjct: 207 YNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR-------WADAL 259
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ K LD + ++ +A + A+ M PN +T+ +L++
Sbjct: 260 NMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 319
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ M+ GC PN N L+ A + A++LF T +
Sbjct: 320 KQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAY 379
Query: 469 --------GEDYDGNTDRISNME--HKDKQSITNTPNFVPNSHYS-------SFDKRF-- 509
G++ N + + +E +++ + + N V +++S F+K F
Sbjct: 380 NIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQI 439
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
F P T+TY ++ C K+ L EM+ G++P+ ++TILID+
Sbjct: 440 LKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCK 499
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A MR G SP+VV YT + ++SK+L QA +F M PN VT
Sbjct: 500 AGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVT 559
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDM 647
Y L+ + G E+Q+ VY+ +
Sbjct: 560 YSALIDGLCKAG---EIQKACEVYEKL 583
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 187/430 (43%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + K + L+ A + PN +ID G+C G+ K+ +Y
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALID--GLCKAGEIQKACEVY 580
Query: 280 EDL--RSQNVTLNIY--------------VFNSLMN--VNAHDLKFTLEVYKNMQKLGVM 321
E L S NV + Y + +L++ A + E+ M G
Sbjct: 581 EKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE 640
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQ 380
+ Y+ L+ C G AQE++ + G L V TY++++ ++F D +
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVF---LRMTKCGYLP-SVHTYTSLIDRMFKDGRL-D 695
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+A+KV +ML+ PN +T++++I+ + G +E+A++L M + GC PN L+
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + D + +LF+ + G + T R+ + H + + + + +
Sbjct: 756 DGLGKTGKADASLKLFKQMN------SKGCAPNYVTYRVL-INHCCAAGLLDEAHLLLDE 808
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
K + Y+ ++ + L+ EM + P + +LID+
Sbjct: 809 M-----KHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863
Query: 561 SGNVEGALQILKIMREDGMSPDVVA---YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G +E AL++ K + E S ++ + Y + I+ + ++++AF+L+ EM I P+
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923
Query: 618 LVTYITLLRA 627
L+ +++L++
Sbjct: 924 LIVFVSLVKG 933
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------- 299
K+ +P++Y +ID G ++R+ ++++RS + N+ + +L++
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY-------GEVK- 351
+ AHD ++ M + +Y+ L+ C AG A E+Y G V+
Sbjct: 539 IQAHD------IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVES 592
Query: 352 --HLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ E + +V TY ++ A+ A ++ + ML+AG PN I + +LI+
Sbjct: 593 DFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDG 652
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G ++ A +F M + G P+ L+ + + D A ++ S L+ +
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL-SEMLNDSCNP 711
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
Y D +S + I N + S + P TY L+
Sbjct: 712 NVVTYTAMIDGLSKV-----GEIEKALNLL------SLMEEKGCSPNVVTYTALIDGL-G 759
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ A L +M + G +PN++++ +LI+ C +G ++ A +L M+ +
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
Y A++ SK+ + L EEM+ ++ P Y L+ + S+ G L
Sbjct: 820 GYHCAVQ--GFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRL 867
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 131/337 (38%), Gaps = 68/337 (20%)
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W AL+ + G P+ +T+++L+ A+AG VE + +EM +G +
Sbjct: 185 WDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGY 244
Query: 439 LLQACVEACQFDRAFRL-----FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
QA + ++ A + F T+ TQ+ G + + H+ + + +
Sbjct: 245 FAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN-SCI 303
Query: 494 PNFVP-NSHYSSFDKRFSF---------------KPTTTTYNILMKACCT--DYYRVKAL 535
PN V + S F K+ F P + +N L+ C DY L
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 536 MNEMRTVGLSPNHISWTILIDA-CG----------------------------------- 559
N M T G P ++++ I I + CG
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 560 -----GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G G E A QILK M G PD YT I ++K+++++F LF+EMK +
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++ TY L+ + + G ++Q + + +M G
Sbjct: 484 NPDVYTYTILIDSFCKAGL---IEQARSWFDEMRSVG 517
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 176/394 (44%), Gaps = 58/394 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
++DV G+ +++ + ++ ++ V ++ +N+L+N V D + E+ M++ G
Sbjct: 188 VVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREG 247
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+A + +Y IL++ + A+++Y E+ + +++DV+ Y++++ A
Sbjct: 248 VVASLVTYTILIEWYASSERIGEAEKVYEEM----CERNVEMDVYVYTSMISWNCRAGNV 303
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A + ++M+ G+ PNT T+ +LI+ AG +E A L EEM G + N N +
Sbjct: 304 RRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTM 363
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + D AFRL Q I
Sbjct: 364 MDGYCKRGMMDEAFRL--------------------------------QDIM-------- 383
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+R F+ TYNIL C Y K ++N M G++PN ++ I+
Sbjct: 384 -------ERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEI 436
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN+ + L+ + + G+ P++V Y T I +++++KQA L EM + P+
Sbjct: 437 YCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPD 496
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ TY +L+ + +V + L ++ +M G
Sbjct: 497 VFTYTSLIHGEC---IVDKVDEALKLFNEMLVKG 527
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 49/245 (20%)
Query: 258 ICRTIID--------VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAH 303
ICR I+ + G+C G + + E+++ + V LN+ +FN++M+
Sbjct: 314 ICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMM 373
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACC-------------------LAGNTVLAQ 344
D F L+ M++ G AD+ +YNIL C +A N V
Sbjct: 374 DEAFRLQ--DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCA 431
Query: 345 ---EIYGE----------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
EIY + ++++E +GV+ ++ TY+T++ ++ + + A +K +M+
Sbjct: 432 TFIEIYCQEGNLAEPERFLRNIEKRGVVP-NIVTYNTLIDAYSKNEKVKQAHXLKAEMVE 490
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ T++SLI+ V++A+ LF EML G N + ++ + + D
Sbjct: 491 KGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADE 550
Query: 452 AFRLF 456
A +L+
Sbjct: 551 ALKLY 555
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+N++K GV+ ++ +YN L+ A A + E+ KG+L DVFTY++++
Sbjct: 451 RNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVE---KGLLP-DVFTYTSLIHG 506
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
ALK+ +ML G+ N T++++I+ + G ++A+ L++EM++ G P+
Sbjct: 507 ECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPD 566
Query: 433 SQ 434
+
Sbjct: 567 DR 568
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 241 LRAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
L Y+ +K+ L+ +PN+ C T I++ G+ + ++ + V NI
Sbjct: 405 LHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVT 464
Query: 294 FNSLMNV--------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N+L++ AH LK M + G++ D+ +Y L+ C+ A +
Sbjct: 465 YNTLIDAYSKNEKVKQAHXLK------AEMVEKGLLPDVFTYTSLIHGECIVDKVDEALK 518
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E + KG+ + +V TY+ I+ + ALK+ ++M+ G+ P+ + +L+
Sbjct: 519 LFNE---MLVKGI-RGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV 574
Query: 406 NA 407
+
Sbjct: 575 GS 576
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S TI++D G V A +++ M G+ P V Y T + CV K + + M
Sbjct: 184 SLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLM 243
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + +LVTY L+ Y S + + VY++M
Sbjct: 244 EREGVVASLVTYTILIEW---YASSERIGEAEKVYEEM 278
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 170/415 (40%), Gaps = 42/415 (10%)
Query: 250 HLSSPN-MYICRTIIDVCGICGDYMKSRA-----IYEDLRSQNVTLNIYVFNSLMNVNAH 303
H SPN +++ R I +C +RA I DL L FN+L++
Sbjct: 253 HGVSPNSVWLTRFISSLCK------NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 304 DLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVL 359
++ + ++ M ++ + D+ + IL+ C + A E++ ++ K + V+
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 360 KLDVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K D ++T++ KV + ++ +++K L PN +T++ LI+ AG +E
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMK---LEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A + M + +PN N ++ + A F E GN
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME--------KEGVKGN 475
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRV 532
+ H + + N ++ P Y L+ C D+ +
Sbjct: 476 VVTYMTLIH----ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ +++ G S + +++ +LI N E ++L M ++G PD + Y T I
Sbjct: 532 R-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ K + + E+M+ + P + TY ++ A Y S+ E+ + L +++DM
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDM 642
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 37/243 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTL 461
L
Sbjct: 642 MGL 644
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 63/334 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N LL CL N +++ +K E K ++ DV T ++ ++ AL+V
Sbjct: 297 FNALL--SCLGRNMDISRMNDLVLKMDEVK--IRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 387 EDMLSAG------VTPNTITWSSLINACANAGLVEQAMHLFEEM-LQAGCEPNSQCCNIL 439
E M + ++I +++LI+ G +++A L M L+ C PN+ N L
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A + + A + +S M+ +
Sbjct: 413 IDGYCRAGKLETA-----------------------KEVVSRMKEDE------------- 436
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDA 557
KP T N ++ C + A++ +M G+ N +++ LI A
Sbjct: 437 -----------IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C NVE A+ + M E G SPD Y I + +R A + E++K +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ Y L+ + +V + L DM K G
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLT---DMEKEG 576
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 165/367 (44%), Gaps = 24/367 (6%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+TLN ++ + H L + + LG D SY L+ C G T A E+
Sbjct: 141 ITLNTFIKGFCLKGQIHQ---ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALEL 197
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ ++ K +++LDV YSTI+ K A + +M+S ++ N +T+S+LI+
Sbjct: 198 ---LRRVDGK-LVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G ++ A+ LF +M P+ NIL+ A + + A K +
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA----------KNGL 303
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
A+ D ++ D + N N + S ++ R T +YNI++ C
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEVN-MAKSILNTMSHR-GVTATVRSYNIVINGFC 361
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A L EM + PN I++ LID SG + AL+++ +M + G PD++
Sbjct: 362 KIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDII 421
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y++ + ++ + +A +L ++K I+PN+ TY L+ + G L + + ++
Sbjct: 422 TYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN---IF 478
Query: 645 QDMWKAG 651
+D+ G
Sbjct: 479 EDLLVKG 485
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 164/396 (41%), Gaps = 62/396 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ R + LR D L ++ + TIID +C D + A +Y ++ S+ ++
Sbjct: 189 GETRAALELLRRVDGKLVQL---DVVMYSTIID--SMCKDKNVNDAFDLYSEMVSRRISS 243
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
NI +++L++ LK + ++ M + D+ ++NIL+ A C G +E
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR---VKEAK 300
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + +G+ K D+ TY++++ + MA + M GVT +++ +IN
Sbjct: 301 NGLAMMMKQGI-KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+V+QAM LF+EM PN N L+ ++ + A L
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL------------ 407
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
I M + +Q P TY+ ++ A C
Sbjct: 408 -----------IDLMHDRGQQ------------------------PDIITYSSILDALCK 432
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
++ + AL+ +++ G+ PN ++TILID G +E A I + + G + V
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
YT I+ +A SL +MK P+ +TY
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITY 528
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 153/394 (38%), Gaps = 59/394 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K +++ A Y S N+ +I I G + ++
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASYNILLKACCLA 337
+ S+N+ ++Y FN L V+A + ++ KN M K G+ D+ +YN L+ CL
Sbjct: 271 MTSENINPDVYTFNIL--VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+A+ I + H +GV V +Y+ ++ F K A+K+ ++M + PN
Sbjct: 329 NEVNMAKSILNTMSH---RGVTA-TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPN 384
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++SLI+ +G + A+ L + M G +P+ + +L A + D+A L
Sbjct: 385 VITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL- 443
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ KD+ +P T
Sbjct: 444 ------------------------IKLKDQ----------------------GIRPNMYT 457
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ C + + ++ G + ++T++I G + AL +L M+
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ PD + Y I +A L EM
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y+ V +L +M G+ PN +++ ILI+ G + A +L + + G PD + T
Sbjct: 86 YHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNT 145
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
IK ++ QA + +++ + V+Y TL+ + G
Sbjct: 146 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ F K + + A++ + PN+ ++ID G+C G + + + + +
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID--GLCKSGRISYALELIDLMHDR 414
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+I ++S+++ H + + + ++ G+ +M +Y IL+ C G A
Sbjct: 415 GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ I+ + L KG L V TY+ +++ F + AL + M P+ IT+
Sbjct: 475 RNIFED---LLVKGY-NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 404 LINACANAGLVEQAMHLFEEMLQAG 428
+I + + ++A L EM+ G
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRG 555
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 38/419 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A R +A SPN+ +++ G+C G ++ A+ + + + NI +N++
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLH--GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ + L E Y ++++ G ++ +Y +LL A C G A++ G V+ +
Sbjct: 297 IDGHCK-LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK---AEDAIGLVEVMV 352
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG + ++FTY++++ +F + A ++ M+ G PN ++++++I A V
Sbjct: 353 EKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGED 471
+ + L E+ML C P+ N ++ A + + D A+ LF + + V
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 472 YDG--NTDRISNMEHKDKQSITN---TPNFVP--------------NSHYSSFDKRFS-- 510
G + R E+ ++ +P+ + + Y F + S
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY+I++ + C + +A ++ M G P I++ LID +GN++ AL
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+IL+++ G PDVV ++ I + RL+QA L E M + P+ VTY TLL+
Sbjct: 592 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 54/342 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ + +L++ DL +E+ + M + G + +YN ++ C A +++
Sbjct: 148 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLF 207
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E G DVFTYSTIV + A ++ E M+S G +PN +T+SSL++
Sbjct: 208 ---KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG +++A L + M ++GC PN N ++ + + D A+ L
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL------------ 312
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-C- 525
L E DG +P TY +L+ A C
Sbjct: 313 LEEMVDGGC-----------------------------------QPNVVTYTVLLDAFCK 337
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M G PN ++ L+D VE A Q+L M + G P+VV+
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y T I ++ ++ + L E+M P++VT+ T++ A
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 183/432 (42%), Gaps = 27/432 (6%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSR 276
P A I + N + R L SAL+ + ++ S P+++ TI+D G +
Sbjct: 182 PNA-ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ E + S+ + N+ ++SL++ A L + + M + G ++ +YN ++
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A + E+ G + +V TY+ ++ F + A+ + E M+ G
Sbjct: 301 CKLGRIDEAYHLLEEM----VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN T++SL++ VE+A L M+Q GC PN N ++ +A +
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFK 512
L LS V ++ D + D Y F+ +
Sbjct: 417 LLEQM-LSNNCVPDIVTFNTIIDAMCKTYRVDIA-------------YELFNLIQESGCT 462
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C + + + L+ EM R G SP+ I++ +ID S V+ A +
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M DG++PD V Y+ I + + + +A ++ E M P +TY TL+
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 630 RYGSLHEVQQCL 641
+ G+L + + L
Sbjct: 583 KTGNLDKALEIL 594
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 171/377 (45%), Gaps = 21/377 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ ++D CG + + E + + N++ +NSL+++ +++ ++
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M + G + ++ SYN ++ C A T + + + + L V D+ T++TI+
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKA--TKVHEGVLLLEQMLSNNCVP--DIVTFNTIID 438
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCE 430
+A ++ + +G TPN +T++SL++ + +QA +L EM + GC
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N ++ ++ + DRA++LF L L D + IS++ K
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLF----LQMLSDGLAPDDVTYSIVISSLC---KWRF 551
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
+ N V + F P TY L+ C KAL + + + G P+
Sbjct: 552 MDEANNVLELMLKN-----GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++I ID G + A ++L+ M G+ PD V Y T +K + R + A LFE
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666
Query: 609 MKHYQIQPNLVTYITLL 625
M+ +P+ TY TL+
Sbjct: 667 MRQCGCEPDNATYTTLV 683
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 17/275 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+VF+Y+T++ F A + AL + E M+ G P+ ++++++IN V++A +
Sbjct: 78 NVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVM 137
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M+Q GC+PN L+ D A L R T Y N +N
Sbjct: 138 DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT--------ERGYRPNAITYNN 189
Query: 482 MEHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
+ H + + + + ++ S P TY+ ++ + A L+
Sbjct: 190 IMHGLCSGRKLDSALQL-----FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M + G SPN ++++ L+ +G ++ A +L+ M G SP++V Y T I +
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
R+ +A+ L EEM QPN+VTY LL A + G
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 46/343 (13%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTYSTIVKVF 373
M + G+ A + +L+ C AG A V H E D TY+T++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDA------VLHFREMSKTCPPDSVTYNTMINGL 54
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A+++ E+M+ G PN +++++++ A VE A+ L E+M+ GC P+
Sbjct: 55 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDV 114
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGE---------DYDGNTDRISN 481
++ + Q D A R+ Q + G D DG + +
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
M + ++P TYN +M C+ AL EM
Sbjct: 175 MTER------------------------GYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 540 RTVG-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G P+ +++ ++D+ SG V+ A ++++ M G SP+VV Y++ + ++ +
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK 270
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L +A +L + M PN+VTY T++ + G + E L
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 171/427 (40%), Gaps = 62/427 (14%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + K L A+R + + +PN++ T++ G C A
Sbjct: 41 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH--GFCKANRVENA 98
Query: 278 IY--EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ E + + ++ + +++N + V M + G ++ +Y L+
Sbjct: 99 LWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 158
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A E+ V+ + +G + + TY+ I+ + AL++ ++M +G
Sbjct: 159 FCRVGDLDGAVEL---VRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Query: 394 -VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ T+S+++++ +G V+ A L E M+ GC PN + LL +A + D A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L + T R
Sbjct: 275 TALLQRMT-----------------------------------------------RSGCS 287
Query: 513 PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN ++ C R+ L+ EM G PN +++T+L+DA G E A+
Sbjct: 288 PNIVTYNTIIDGHCK-LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++++M E G P++ Y + + + + +++A L M PN+V+Y T++
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406
Query: 630 RYGSLHE 636
+ +HE
Sbjct: 407 KATKVHE 413
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 111/552 (20%), Positives = 225/552 (40%), Gaps = 98/552 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEG---NVSKFASMLSLEMVASGIVKSIREGRID 130
Y+ + L K G++++ +VE+ +VS+G NV ++S+L G+ K+ G++D
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEA-MVSKGCSPNVVTYSSLL------HGLCKA---GKLD 272
Query: 131 CVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGEVEMFVGL 177
+L+++ G +P + DG + LL + ++D G V
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL----EEMVDGGCQPNVVTY 328
Query: 178 MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDL 237
+L+ F + ++ +V++ V K V Y ++ +FC KK ++
Sbjct: 329 TVLLDAF-CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD----MFC-------KKDEV 376
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFN 295
A + + + PN+ T+I G+C + E + S N +I FN
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVI--AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
++++ + + E++ +Q+ G ++ +YN L+ C + A+ + ++ +
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL---LREM 491
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
K D+ TY+T++ +K A K+ MLS G+ P+ +T+S +I++
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++A ++ E ML+ G +P + L+ + D+A + + LSK
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSY------- 603
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-DKRFSFKPTTTTYNILMKACCTDYYRV 532
P+ V S + + KR + +
Sbjct: 604 --------------------PDVVTFSIFIDWLSKRGRLR------------------QA 625
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ M GL P+ +++ L+ + E A+ + ++MR+ G PD YTT +
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685
Query: 593 CVRSKRLKQAFS 604
V K K +
Sbjct: 686 LVDKKSYKDLLA 697
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 175/420 (41%), Gaps = 61/420 (14%)
Query: 57 TALLSTVRRDLSSRNDY-YADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSL 113
TALL + R S N Y + K GR++E ++E +V + NV + +L
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD- 333
Query: 114 EMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL--KNECQR------- 164
+ G+ + +G+++ + E G P S + K+E +R
Sbjct: 334 --------AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 385
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK--PDV---NLAIRYACIVPR 219
++ G V V V+ K + + Q+ N PD+ N I C R
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 220 ADILF--CNFVREFGKKRDLVS---------ALRAYDA--------SKKHLSSPNMYICR 260
DI + N ++E G +LV+ R +D ++K SP++
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505
Query: 261 TIIDVCGICGDYMKSRA-------IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
T+ID G+C RA + + L +VT +I V +SL D V +
Sbjct: 506 TVID--GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI-VISSLCKWRFMDEANN--VLE 560
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M K G +Y L+ C GN A EI ++ L +KG DV T+S +
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI---LQLLLSKGSYP-DVVTFSIFIDWL 616
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + A ++ E ML AG+ P+T+T+++L+ +A E A+ LFE M Q GCEP++
Sbjct: 617 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDN 676
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ +I+ S ++ A+++L+ M ++G +P+V +Y T + ++ R++ A L
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
E+M P++V+Y T++ + L +V + V M + G
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCK---LDQVDEACRVMDKMIQRG 144
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 163/363 (44%), Gaps = 55/363 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
++ + +N+ ++ ++ +++ D F L ++ M+ G+ AD+ +Y+ L+ C
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + ++ DV T+S ++ VF A ++ +M++ G+
Sbjct: 292 NDGKWDDGAKM---LREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+TIT++SLI+ + +A +F+ M+ GCEP+ +IL+ + +A + D RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
FR + + +PN T
Sbjct: 408 FREIS--------------------------------SKGLIPN---------------T 420
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C K L EM + G+ P+ +++ IL+D +G + AL+I +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ M+ + Y I + ++ A+SLF + ++P++VTY ++ + GS
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 634 LHE 636
L E
Sbjct: 541 LSE 543
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
+ G+C D + + ++ +N+ ++ F++L++V + K E+Y M G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +YN L+ C A +++ + +KG + D+ TYS ++ + AK
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMF---DLMVSKGC-EPDIVTYSILINSYCKAKRVD 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+++ ++ S G+ PNTIT+++L+ +G + A LF+EM+ G P+ ILL
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F S+ + +G Y+ + N D S
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDAW----------S 511
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA- 557
+ S + KP TYN+++ C +A L +M+ G +P+ ++ ILI A
Sbjct: 512 LFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
GGSG + ++++++ M+ G S D I + + +RL ++F
Sbjct: 571 LGGSGLIS-SVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLDKSF 614
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
V G C M+ I D+ + + +N Y L F V KLG D
Sbjct: 89 VLGFCKG-MELNGIEHDMYTMTIMINCYC-------RKKKLLFAFSVLGRAWKLGYEPDT 140
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+++ L+ CL G A + + ++ + D+ T ST++ AL
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP----DLVTVSTLINGLCLKGRVSEALV 196
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + M+ G P+ +T+ ++N +G A+ LF +M + + + +I++ +
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 445 EACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ FD A LF + + + G DG D + M ++ I N
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML---REMIGR--NI 311
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
+P+ T++ L+ + K L NEM T G++P+ I++ L
Sbjct: 312 IPD---------------VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + A Q+ +M G PD+V Y+ I ++KR+ LF E+ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN +TY TL+ + G L+ ++ ++Q+M G
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKE---LFQEMVSRG 450
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 17/240 (7%)
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V A+ LFE M+Q+ P N L A Q+D + L+ G ++D
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN------GIEHD 104
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYR 531
T I + K+ + + + + + ++P T T++ L+ C +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAW------KLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL++ M + P+ ++ + LI+ G V AL ++ M E G PD V Y +
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S A LF +M+ I+ ++V Y ++ + + GS + L+++ +M G
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA---LSLFNEMEMKG 275
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 28/253 (11%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + E M+ + P I ++ L +A A + + + M G E + I++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 442 ACVEACQFDRAFR-LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQSITNTP 494
+ AF L R+W L Y+ +T S + E + +++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLG---------YEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
V +P T + L+ C +AL ++ M G P+ +++
Sbjct: 165 RMVEMKQ----------RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++ SGN AL + + M E + VV Y+ I + A SLF EM+
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 613 QIQPNLVTYITLL 625
I+ ++VTY +L+
Sbjct: 275 GIKADVVTYSSLI 287
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ V G C G ++ +++++ S+ V ++ + L++ + +L L
Sbjct: 418 PNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ MQK + + YNI++ C A A ++ L KGV K DV TY+ +
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC---SLSDKGV-KPDVVTYNVM 531
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAG 428
+ A + M G TP+ T++ LI A +GL+ ++ L EEM G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCG 590
Query: 429 CEPNSQCCNILLQACVEACQFDRAF 453
+S +++ + + D++F
Sbjct: 591 FSADSSTIKMVIDMLSDR-RLDKSF 614
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 180/459 (39%), Gaps = 92/459 (20%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL-SSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F +EF ++ D +LR + ++ + PN +I +I + G G K I+E++
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEM 169
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQK----------------------- 317
+ V+ +++ + +L+N + K+ +LE+ + M+K
Sbjct: 170 GAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLD 229
Query: 318 -------------LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
G+ D+ +YN LL AC N L E + + GV+ D+
Sbjct: 230 WEGLLGLFAEMRHEGIQPDIVTYNTLLCACS---NRGLGDEAEMVFRTMNEGGVVP-DIT 285
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ +V F ++ ++M S G P +++ L+ A A G +E A +F M
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+AGC PN++ +ILL + ++D LF +S T+
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTE------------------- 386
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTV 542
P TYN L+ Y V L ++M
Sbjct: 387 ----------------------------PDAATYNTLIDVFGEGGYFKEVVTLFHDMAEE 418
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN ++ LI ACG G + A +IL M E GM P AYT I+ ++ ++A
Sbjct: 419 NVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEA 478
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M +P + TY TL+ +R G E + L
Sbjct: 479 LVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAIL 517
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 120/296 (40%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+E+
Sbjct: 104 KLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCS 163
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+FEEM G + L+ + +++ + L
Sbjct: 164 DIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLEL----------------------- 200
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+E K+ ++ P+ TYN ++ +C D+ + L
Sbjct: 201 ---LERMKKERVS---------------------PSILTYNTVINSCARGGLDWEGLLGL 236
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M E G+ PD+ YT + +
Sbjct: 237 FAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGK 296
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL + L +EM P + +Y LL A +R G+ ++ V++ M +AG
Sbjct: 297 LNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGN---IEDATGVFRLMQEAG 349
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF 307
+ P+ T+IDV G G + + ++ D+ +NV N+ + L+ HD
Sbjct: 385 TEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHD--D 442
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAG---------NTVLAQ------EIYGEVKH 352
++ +M + G++ +Y +++A A NT+ E Y + +
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502
Query: 353 LEAKG---------VLKLDVF-------TYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ A+G +LK+ F +++ +++ F ++ A+K +M + + P
Sbjct: 503 MFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVP 562
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ T ++++ AGLV++++ F+E+ +G PN C ++L ++ +++ A+ L
Sbjct: 563 DERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELL 622
Query: 457 RSWTL---SKTQVALGEDYDGNTDRISNME 483
S +G+ G+ D SN +
Sbjct: 623 DEMLTNRASNIHQVIGQMIKGDFDDDSNWQ 652
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 13/239 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + +G+ AL + + S P + T+I + G Y ++ AI +
Sbjct: 462 YTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V FN ++ +F ++ Y M+K ++ D + +L C+AG
Sbjct: 522 DFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAG--- 578
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
L E + + ++A G+L +V Y ++ V+A + W A ++ ++ML+ +
Sbjct: 579 LVDESVEQFQEIKASGILP-NVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVI 637
Query: 402 SSLINAC----ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+I +N +VE ++F+++ GC + N LL+A Q +RA R+
Sbjct: 638 GQMIKGDFDDDSNWQMVE---YVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVL 693
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 431 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 490
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 491 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 546
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 547 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 606
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 607 DIGKAFEYF-------TKI----------------------------------------K 619
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 679
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 680 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 739
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +C +++M AG
Sbjct: 740 KGWARVSLPDRALKC---FEEMKLAG 762
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 493 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 553 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 612
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK------------------ 386
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 613 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 668
Query: 387 -------------EDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 669 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 728
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 729 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 761
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 589 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 648
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 649 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGVPP-NIHTYTSYI 704
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 705 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 764
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 765 PDEASYHCLVTS 776
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 599 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 658
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 659 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 718
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 719 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 774
Query: 406 NA 407
+
Sbjct: 775 TS 776
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 59/341 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 266 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 324
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L R + E
Sbjct: 325 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE---------MEE 375
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 376 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 429
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 430 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 489
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 490 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 549
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P ++TY L+ R H+VQ+ ++V M AG
Sbjct: 550 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAG 587
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 298
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 299 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 358
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 359 QSGNMERAEE 368
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 219/537 (40%), Gaps = 87/537 (16%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 223 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 281
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADIL--------------FCNFVREFGKKRDLV 238
I LC ++ + A+IL FC + + ++ ++
Sbjct: 282 YNVLIHGLC----------KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG 331
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL D +K P+ +I+ C D + + E + + N+ V+++L+
Sbjct: 332 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + ++ + M GV D+ YN ++ AG +E + ++ +
Sbjct: 392 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGR 448
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LK D T+ + ++ A K ++ML G+ PN ++ LIN AG + +
Sbjct: 449 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ Q C+ + ++ + A ++F
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS------------------- 548
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
E K+K + P TY+ L+ C KA
Sbjct: 549 ------ELKEKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFE 580
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM G++PN + L+D SG+++ A ++ M E G+ PD V Y+T I
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S+ + +AFSLF EM +QP+ Y L+ + G ++++ + ++++M + G
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKG 694
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 166/386 (43%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++++ LGV+ D+ +
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 583
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 644 NVAEAFSLFHEMPSKGVQ------------------------------------------ 661
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 662 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 715
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M + PD V YTT I ++ ++++A LF+EM+ + + VTY +L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
++ G EV A+++ M G
Sbjct: 776 YGYNKLGQSSEV---FALFEKMVAKG 798
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
++M + G++ + +Y I+ C A A+ + E++ K LK D S ++
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDG 253
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F L++K+ M+S G+ N IT++ LI+ G +E+A + + M+ GC+PN
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
S+ +L++ RA L + ME +
Sbjct: 314 SRTFCLLIEGYCREHNMGRALEL-----------------------LDEMEKR------- 343
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
N VP++ +Y ++ C D L+ +M GL PN +
Sbjct: 344 --NLVPSA---------------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LI G +E A ++L M G++PD+ Y I ++ ++++A + E++
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++P+ VT+ + S+ G + E +
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAK 475
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 178/394 (45%), Gaps = 37/394 (9%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 523 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 580
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E + +KGV + F Y+ +V + A+ + +ML G
Sbjct: 641 KSENVAEAFSLFHE---MPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++++LI+ + +++A LF+EM+ P+ ++ +A + + A L
Sbjct: 697 -TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYS 503
F+ T++ T + G + G + + M K + T V +H
Sbjct: 756 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ +FK T +++L+ A C D L++EM +GL P+ +
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 875
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ L+ + +G ++ A ++ + ++ G+ PD
Sbjct: 876 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 909
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ T+ID G ++ ++++++ +N+ ++ + SLM + L + EV+
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM-YGYNKLGQSSEVFA 789
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGV---------- 358
+K+ GV D +Y +++ A C N V A ++ EV K + KG
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 849
Query: 359 -------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LK + ST+V+ F +A A +V E + S G+ P+T
Sbjct: 850 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 909
Query: 400 TWSSLINACANAGLVEQAMHLFEEML 425
T L+N N E A +L ++++
Sbjct: 910 TLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 175/394 (44%), Gaps = 56/394 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ + +I G M++ L +V ++Y+FN L++ + ++
Sbjct: 59 SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++NM+ V ++ +YN ++ C +GN A+E+ E+ + G D+ TY+T++
Sbjct: 119 LFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM--IRKGGKSAPDIVTYNTLI 176
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A +E M +AG+ P+ +T + L++ G VE+A+ + + M AG
Sbjct: 177 NAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ N ++ A A + A + ++ + S
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTMSCS---------------------------- 268
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
P+ V T+N L+ C +AL + EM + P+
Sbjct: 269 ---PDLV-------------------TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++TIL++ G V+ A +L+ + G PDV+AYT+ + +S +++A L +E
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
M + +V Y +L+ R G++H+ ++ LA
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 170/380 (44%), Gaps = 27/380 (7%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
S+P++ T+I+ ++ A E +++ + ++ N L++ D++ L
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M+ G + D+ +YN ++ A C+AG V A EI + D+ T++T+
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS-------CSPDLVTFNTL 277
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A AL+V E+M + P+ IT++ L+N G V+ A +L EE+++ G
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
P+ L+ ++ + + A +L + ++ +T V + R N+ HK +
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV-HKAR 396
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + + P TYNI++ D KA L++++ G
Sbjct: 397 EILAEMVS-------------INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 443
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ LID + V A + M G P+ V + + R R+ A+SL
Sbjct: 444 PDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSL 503
Query: 606 FEEMKHYQIQPNLVTYITLL 625
EM + PN+V Y +L+
Sbjct: 504 VVEMSRKRHAPNVVVYTSLI 523
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 33/319 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV +Y+ ++ + + KV +D+L +G +PN +T+ LI AG +A+
Sbjct: 24 KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGED 471
+ + P+ N+L+ + D+A +LF + S+ + V G
Sbjct: 84 FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143
Query: 472 YDGNTDR----ISNMEHKDKQSITN--TPNFVPNSHYS--------SFDKRF---SFKPT 514
GN ++ + M K +S + T N + N+ Y +F ++ P
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203
Query: 515 TTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T NIL+ C D +AL ++ M+ G P+ I++ +I A +G V A +ILK
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M SPD+V + T + ++ L +A + EEM I P+++TY L+ R G
Sbjct: 264 TM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+VQ + +++ + G
Sbjct: 321 ---QVQVAFYLLEEIVRQG 336
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 151/383 (39%), Gaps = 63/383 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP++ T++D G C M RA + E++ +N+ ++ + L+N ++
Sbjct: 268 SPDLVTFNTLLD--GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 325
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + + + G + D+ +Y L+ C +G +E + VK + +G + V YS+
Sbjct: 326 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI---EEAHKLVKEMSVRGC-RTGVVMYSS 381
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V + A A ++ +M+S + P T++ ++ G + +A+ L +++ G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ N L+ +A + A L D +++
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDL--------------------ADEMAS------- 474
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC----CTDYYRVKALMNEMRTVGL 544
R F T +++ C D + + M+ R
Sbjct: 475 -------------------RGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH--- 512
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN + +T LID S ++ A +L MR G++ D AY I R+ +A +
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMA 572
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
+++EM P+ T TL A
Sbjct: 573 MYDEMVARGFLPDGSTSKTLEEA 595
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 510 SFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+K +YN IL+K+ ++R + ++ G SPN +++ ILI +G
Sbjct: 22 GYKHDVHSYNHLLDILVKS--GHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+ L+ + E ++PDV + I + QA LFE M+ +++P +VTY T++
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+L + ++ L ++M + G
Sbjct: 140 SGLCKSGNLEKARELL---EEMIRKG 162
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 87/221 (39%), Gaps = 35/221 (15%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G+ K+R I ++ S N+ ++ +N ++ + + + + ++ G
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442
Query: 321 MADMASYNILL----------KAC----------CLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ D+ +YN L+ +AC C + L ++G +
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502
Query: 361 L-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
L +V Y++++ + A V + M GV + + LI + +
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G V +AM +++EM+ G P+ L +A + F+
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 166/412 (40%), Gaps = 65/412 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++++ ++ + + +++ N L+N H + F+ V + KLG + + N
Sbjct: 26 YPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNT 85
Query: 330 LLKACCLAG---------NTVLAQE-----------IYGEVKHLEAKGVLKL-------- 361
L+K CL G + V+AQ + G K E + LKL
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS 145
Query: 362 ---DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V Y+TI+ K A + +M + G+ PN IT+S+LI AG + +A
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGE 470
L EM+ PN IL+ A + + A L T +S + G
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
G M H Q N P +YNI++ C
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVN--------------------PNVYSYNIMIDRLCKS-K 304
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
RV MN +R V + PN ++++ LID G + AL +LK M G DVV YT
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + +++ L +A +LF +MK IQPN TY L+ + G Q+
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 163/392 (41%), Gaps = 53/392 (13%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SAL+ + + PN+ + TIID G+C D L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIID--GLCKD------------------------KLV 166
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
N A+DL Y M G+ ++ +Y+ L+ CLAG + E +G + + K +
Sbjct: 167 N-EAYDL------YSEMDARGIFPNVITYSTLIYGFCLAGQLM---EAFGLLNEMILKNI 216
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V+TY+ ++ + A + M GV PN +++++L++ G V+ A
Sbjct: 217 -NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F M+Q G PN NI++ ++ + D A L R L K V Y D
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE-VLHKNMVPNTVTYSSLIDG 334
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILMKACCTDYY--RVKAL 535
+ IT+ + + ++ +P TY L+ A C + + AL
Sbjct: 335 FCKL-----GRITSALDLLKEMYHRG-------QPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M+ G+ PN ++T LID G + A ++ + + G +V Y I +
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L +A ++ +M+ P+ VT+ ++R+
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 123/303 (40%), Gaps = 53/303 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ KG+ + D+FT + ++ F + V +L G PNTIT ++L+
Sbjct: 34 KQMQVKGI-EPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCL 92
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V++++H ++++ G + + LL + + A +L R
Sbjct: 93 KGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIE---------- 142
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DR S +P YN ++ C D
Sbjct: 143 ------DR-------------------------------STRPNVVMYNTIIDGLCKDKL 165
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A L +EM G+ PN I+++ LI +G + A +L M ++P+V YT
Sbjct: 166 VNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI 225
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ + ++K+A +L M ++PN+V+Y TL+ Y + EVQ ++ M
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDG---YCLIGEVQNAKQMFHTMV 282
Query: 649 KAG 651
+ G
Sbjct: 283 QKG 285
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
ML TP + ++ ++ + A+ LF++M G EP+ NIL+
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINC------ 54
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
F ++ S+T+ + LG Y NT ++ + + + + H+
Sbjct: 55 FCHLGQMTFSFTVLGKILKLG--YQPNTITLNTL----MKGLCLKGEVKKSLHFHDKVVA 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL----MNEMRTVGLSPNHISWTILIDACGGSGNV 564
F+ +Y L+ C AL M E R+ PN + + +ID V
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRST--RPNVVMYNTIIDGLCKDKLV 166
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A + M G+ P+V+ Y+T I + +L +AF L EM I PN+ TY L
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTIL 226
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A + G + E + LAV M K G
Sbjct: 227 MDALCKEGKVKEAKNLLAV---MTKEG 250
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+PN+Y +ID ++ + ++ +N+ N ++SL++ + T L+
Sbjct: 287 NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALD 346
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M G AD+ +Y LL A C N A ++ ++K +G+ + + +TY+ ++
Sbjct: 347 LLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE---RGI-QPNKYTYTALI 402
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A K+ + +L G N T++ +I+ G++++A+ + +M + GC
Sbjct: 403 DGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCI 462
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRS 458
P++ I++++ E Q D+A +L
Sbjct: 463 PDAVTFEIIIRSLFEKDQNDKAEKLLHE 490
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 55/373 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTY 621
+K I+ + V Y
Sbjct: 557 IKDTTIRSDAVLY 569
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 53/337 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+ + +M +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P+ R++ + D I H +
Sbjct: 281 GCTPD--------------------IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ M +PN V+Y +L+ G + ++ ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 319 PNVVCYNTVLK--GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + + G K + +Y+ +
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMSSCGC-KPNTVSYTIV 432
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + + A L T+ + +A +G +++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M K + + + N+ SS KR+ TD R M +
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWE----------------TD--RAIDFFAYMVS 594
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++T+LI G + A ++L
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 121/321 (37%), Gaps = 56/321 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
T+L+ E ++ L+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS 345
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +I +++ S + N ++ L+N ++ HD +++ M + G+ D A Y
Sbjct: 452 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 511
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++A C GN A I +++ K ++ + I++ +A A + AL +
Sbjct: 512 NLLIEAFCKMGNMDRAICILEKMQ----KERMQPSNRAFRPIIEGYAVAGDMKSALDTLD 567
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M +G P +T+++LI+ V++A+ + ++M AG PN I+++ +
Sbjct: 568 LMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 627
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+AF F T++ K
Sbjct: 628 DIGKAFEYF-------TKI----------------------------------------K 640
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K Y L++ACC AL EM + N + ILID G+V
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 700
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++K M+EDG+ P++ YT+ I C ++ +++A + EEM ++PN+ TY TL+
Sbjct: 701 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 760
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +C +++M AG
Sbjct: 761 KGWARVSLPDRALKC---FEEMKLAG 783
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K ++ A+ + +K P+ R II+ + GD + + +R
Sbjct: 514 LIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N+L++ V H ++ + V M G+ + +Y I+++ +G+ A
Sbjct: 574 CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAF 633
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV------------------- 385
E + ++K + LKLDV+ Y T+++ + Q AL V
Sbjct: 634 EYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 689
Query: 386 ------------KEDMLSA----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
ED++ GV PN T++S INAC AG +++A + EEM+ G
Sbjct: 690 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 749
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+PN + L++ DRA + F L+
Sbjct: 750 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 782
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+PN + I+ GD K+ + ++ + L++Y++ +L+ + ++ L
Sbjct: 610 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 669
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + YNIL+ G+ A+++ +K ++ GV ++ TY++ +
Sbjct: 670 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL---MKQMKEDGVPP-NIHTYTSYI 725
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A Q A KV E+M+ G+ PN T+++LI A L ++A+ FEEM AG +
Sbjct: 726 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 785
Query: 431 PNSQCCNILLQA 442
P+ + L+ +
Sbjct: 786 PDEASYHCLVTS 797
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R + D+ A + K+ ++YI T++ C G + A+ ++ Q +
Sbjct: 620 MRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 679
Query: 288 TLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +++N L++ A D+ ++ K M++ GV ++ +Y + ACC AG+ A++
Sbjct: 680 PRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK 739
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+ + LK +V TY+T++K +A ALK E+M AG+ P+ ++ L+
Sbjct: 740 VIEEMVDVG----LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 795
Query: 406 NA 407
+
Sbjct: 796 TS 797
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 59/341 (17%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+++ A+G+ + + F ++++V +A A+ + AL E+M S G+ +T+S LI+ A
Sbjct: 287 ENMRARGI-EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 345
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
+ A +LF+E N + ++ A ++ +RA L + E
Sbjct: 346 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV---------CEMEE 396
Query: 471 D-YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNIL------ 521
D D D +M H I N N F+ K FKP+ +Y L
Sbjct: 397 DGIDAPIDVYHSMMH-GYTIIQNE-----NKCLVVFERLKECGFKPSIISYGCLLNLYVK 450
Query: 522 -------------MKACCT------------------DYYRVKALMNEMRTVGLSPNHIS 550
M++C D+ A+ EM GL P+
Sbjct: 451 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 510
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +LI+A GN++ A+ IL+ M+++ M P A+ I+ + +K A + M+
Sbjct: 511 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 570
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P ++TY L+ R H+VQ+ ++V M AG
Sbjct: 571 RSGCVPTVMTYNALIHGLVRK---HKVQRAVSVLDKMSIAG 608
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 512 KPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ + +++ A D + +A MR G+ PN +T L+ A + ++ GAL
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 319
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
++ M+ +G+ +V Y+ I + + A +LF+E K N + Y ++ A
Sbjct: 320 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 379
Query: 630 RYGSLHEVQQ 639
+ G++ ++
Sbjct: 380 QSGNMERAEE 389
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 190/476 (39%), Gaps = 71/476 (14%)
Query: 190 ELDEEFRIVQLCVNKPDVNLA---IRYACIVPRAD-----ILFCN---FVREFGKKRD-L 237
+LD R+V+ PD LA +R C R D + C V +G D
Sbjct: 86 DLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGY 145
Query: 238 VSALRAYDASK---KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
A R DA + PN Y +I G + ++ +D+ + ++ +
Sbjct: 146 CRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTY 205
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N L+ + +E+ M+ G + +YN+L+ C G+ A E+ +++
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL---LRN 262
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L + G K Y+T++K A+ W A ++ +ML PN T++ +I + G
Sbjct: 263 LPSHGC-KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
L++QA+ L E+M + GC N N ++ E D A L LSK
Sbjct: 322 LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL-----LSKM-------- 368
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
K + KP TYN L+K C+ V
Sbjct: 369 ----------------------------------KSYGCKPDIVTYNTLLKGLCSAAQWV 394
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A LM+ M G P+++++ LI G + A+++ K M + G +P+ + Y+T I
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ +L QA LF EM H P+ + Y L + ++ E Q + QD
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 509
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 159/386 (41%), Gaps = 45/386 (11%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + + +R++ T N +N LM+ D+ LE+ +N+ G +YN
Sbjct: 218 YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 277
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+LK C A A E+ E+ + T++ ++ Q A+++ E M
Sbjct: 278 VLKGLCSAERWGDADELVTEMLRENCPP----NEATFNVVIYSLCRKGLLQQAIQLLEKM 333
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G T N +T++++IN V+ AM L +M GC+P+ N LL+ A Q+
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNT------------DRISNMEHKDKQSITNTPNFV 497
A L + T + L ++ NT D I + + T
Sbjct: 394 VDAEELMDNMTQNG---CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT------ 444
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
P + TY+ ++ A T + L NEM G +P+ I + +L
Sbjct: 445 ---------------PNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 488
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E A+Q ++ +++ G+SP V Y + R+ + + A + M
Sbjct: 489 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 548
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P+ +TY+ L+ + G L+E ++ L
Sbjct: 549 PDDLTYVILIEGLAYEGYLNEARELL 574
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 59/339 (17%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D + + + E+ T N+ ++ SL L+ +++ + M K G A++ +YN +
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIY-SLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAI 348
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C N A + ++K K D+ TY+T++K A W A ++ ++M
Sbjct: 349 INGLCEQRNVDGAMGLLSKMKSYGCKP----DIVTYNTLLKGLCSAAQWVDAEELMDNMT 404
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G P+ +T+++LI GL+ A+ +F++M GC PNS + ++ +A + D
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+A LF + M HK F P+ Y
Sbjct: 465 QALELF-----------------------NEMGHK---------GFNPDKIYQ------- 485
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGA 567
L+ C D ++ + +R + G+SP+ + + ++ +G E A
Sbjct: 486 ----------LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 535
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I+ M G PD + Y I+ L +A L
Sbjct: 536 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++A C Y + L++ MR G +PN++++ +L+D G G+V+ AL++
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ + G P V Y T +K ++R A L EM PN T+ ++ + R
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G L QQ + + + M K G
Sbjct: 320 KGLL---QQAIQLLEKMSKHG 337
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKS 275
P + F + +K L A++ + KH + N+ II+ G+C + +
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN--GLCEQRNVDGA 361
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++S +I +N+L+ +A E+ NM + G + D ++N L+
Sbjct: 362 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGF 421
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM---- 389
C G V A E++ K + KG + TYSTI+ A A AL++ +M
Sbjct: 422 LCQKGLMVDAIEVF---KQMPDKGCTP-NSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 390 ------------------------------LSAGVTPNTITWSSLINACANAGLVEQAMH 419
+G++P+T+ +++++ G E A+
Sbjct: 478 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 420 LFEEMLQAGCEPNSQCCNILLQA 442
+ M+ +GC P+ IL++
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEG 560
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 187/421 (44%), Gaps = 27/421 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D PN+ ++ G+C G ++RA+ +++ S ++ +
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS--GLCRTGRMDETRALMDEMASHSMLPD 298
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + + + L ++ K GVM + +ILL C G A++++
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ H G++ V Y+T++ + + + A + E M S + P+ IT+++LIN
Sbjct: 359 MLVH---TGLVPTTVI-YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+V +A L EM ++G +P+ + N L+ A A Q ++ F + Q +
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ----QKGI 470
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--C 526
D + K I + + Y P YN ++ A
Sbjct: 471 KSDVISFGSVVKAFCKNGK--IPEAVAILDDMIYKDV------APNAQVYNSIIDAYIES 522
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + L+ +M+ G+S + +++ +L+ S ++ A +++ +R G+ PDVV+Y
Sbjct: 523 GDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I C +A L +EM Y I+P L T TL+ A + G +H++ +CL YQ
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM-ECL--YQQ 639
Query: 647 M 647
M
Sbjct: 640 M 640
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 179/429 (41%), Gaps = 40/429 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C +++ G + RA + L + + + +N ++ V A DL L +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 312 YKNMQKL--GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M + D SYN+++ +G A +++ E+ + GV + TY+T+
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM---GVAP-NRITYNTM 235
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + ++++ ML G PN +T++ L++ G +++ L +EM
Sbjct: 236 IDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM 295
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY----------DGNTDRI 479
P+ +IL + LF K V LG DG +
Sbjct: 296 LPDGFTYSILFDGLTRTGESQTMLSLFAESL--KKGVMLGAYTCSILLNGLCKDGKVAKA 353
Query: 480 SN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSF-----------KPTTTTYNILMKA 524
+ H T N + N + D R +F +P TYN L+
Sbjct: 354 KQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C KA L+ EM G+ P+ ++ LIDA G +G +E +L M++ G+ D
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V+++ + +K ++ ++ +A ++ ++M + + PN Y +++ A G + +Q L
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG---DTEQALL 530
Query: 643 VYQDMWKAG 651
+ + M +G
Sbjct: 531 LVEKMKNSG 539
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 155/369 (42%), Gaps = 26/369 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ V N +N++++ V DL+ + M G ++ +YN+LL C
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + + E+ A + D FTYS + Q L + + L GV
Sbjct: 276 RTGRMDETRALMDEM----ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T S L+N G V +A +FE ++ G P + N L+ + AF +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
F +S + + Y+ + + +E +T + V S D
Sbjct: 392 FEQMKSRHIRPDHIT----YNALINGLCKLEM-----VTKAEDLVMEMEKSGVD------ 436
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ T+N L+ A T + ++++M+ G+ + IS+ ++ A +G + A+ I
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M ++P+ Y + I + S +QA L E+MK+ + ++VTY LL+ R
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCR 556
Query: 631 YGSLHEVQQ 639
+ E ++
Sbjct: 557 SSQIDEAEE 565
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + V+ F K + A+ D +PN + +IID GD ++ + E
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ V+ +I +N L+ + + E+ ++ G+ D+ SYN ++ ACC G+
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T AL++ ++M G+ P
Sbjct: 595 T---------------------------------------DKALELLQEMNKYGIRPTLR 615
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
T +L++A A+AG V L+++ML EP+S I++ A V C+ D
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR-CEND 665
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 39/391 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVM 321
G+C G ++RA+ + + N L +N+L++ +F +Y NM G
Sbjct: 319 GLCRMGQVDEARALLNKIPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYE 374
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D ++NI++ G V A E+ E+ K E +V TY+ ++ F
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP------NVITYTILINGFCKQGRL 428
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A ++ M + G++ NT+ ++ LI A G +E+A+ LF EM GC+P+ N L
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFV 497
+ + + + A L+ L E NT + + H + SI V
Sbjct: 489 INGLCKNHKMEEALSLYHDMFL--------EGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540
Query: 498 PNSHYSSFDKRFSFKP-TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTIL 554
+ F P TYN L+KA C K L EM G+ P IS IL
Sbjct: 541 D-------EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I +G V AL+ L+ M G++PD+V Y + I + +++A +LF +++ I
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+P+ +TY TL+ G ++ CL +Y+
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDA--CLLLYK 682
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 158/392 (40%), Gaps = 36/392 (9%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L+I V V + V+ +M GV + ++ +++KA C+
Sbjct: 170 FKSYNVVLDILVDGDCPRVAPN-------VFYDMLSRGVSPTVYTFGVVMKALCMVSEVD 222
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ EDM P+ T+
Sbjct: 223 SACSL---LRDMAKHGCVPNSVI-YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTF 278
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-- 459
+ +I+ AG + +A L + ML G ++ L+ Q D A L
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN 338
Query: 460 -------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYSSFDK 507
TL VA G + +NM + T N V + S +
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398
Query: 508 RFS------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
+ F+P TY IL+ C +A ++N M GLS N + + LI A
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
GN+E ALQ+ M G PD+ + + I ++ ++++A SL+ +M + N V
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+ A S +QQ + +M G
Sbjct: 519 TYNTLVHAFLMRDS---IQQAFKLVDEMLFRG 547
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 34/335 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK LVSAL + PN+ I TI+ + G C G ++ I + ++ ++LN
Sbjct: 389 KKGYLVSALELLNEMVAKRFEPNV-ITYTIL-INGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N L+ D ++ L+++ M G D+ ++N L+ C A +Y
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +GV+ + TY+T+V F Q A K+ ++ML G + IT++ LI A
Sbjct: 507 D---MFLEGVIA-NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKAL 562
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G VE+ + LFEEML G P CNIL+ + + A + + L
Sbjct: 563 CKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM----IHRGL 618
Query: 469 GED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMK 523
D Y+ + + M H + S + F+K S +P TYN L+
Sbjct: 619 TPDIVTYNSLINGLCKMGHVQEAS-------------NLFNKLQSEGIRPDAITYNTLIS 665
Query: 524 ACCTDYYRVKALMNEMRTV--GLSPNHISWTILID 556
C + A + + V G PN ++W+ILI+
Sbjct: 666 RHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 159/397 (40%), Gaps = 46/397 (11%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM------NVNAHDLKFTLEVY 312
C +ID G GD+ + + ++ + + +F +M + + L+++
Sbjct: 102 CYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMW 161
Query: 313 KNMQKLGVMA---DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
GV + SYN++L +A ++ + + ++GV V+T+ +
Sbjct: 162 ------GVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYD---MLSRGV-SPTVYTFGVV 211
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A + DM G PN++ + +LI+A V +A+ L E+M C
Sbjct: 212 MKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCC 271
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDGNTDRISNMEHKD 486
EP+ Q N ++ A + A +L L S + G G + M D
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG----LCRMGQVD 327
Query: 487 K-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALM-NEMRTV 542
+ +++ N +PN P T YN L+ + K L+ N M
Sbjct: 328 EARALLNK---IPN-------------PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++ I+ID G + AL++L M P+V+ YT I + RL++A
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ M + N V Y L+ A + G++ E Q
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 509 FSFKPTTTTYNILMKACCT-DYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+S PT +YN+++ D RV + +M + G+SP ++ +++ A V+
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +L+ M + G P+ V Y T I + R+ +A L E+M +P++ T+ ++
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283
Query: 627 ARSRYGSLHEVQQCL 641
R G +HE + L
Sbjct: 284 GLCRAGRIHEAAKLL 298
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 43/259 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLN 290
K ++ AL+ + P++Y ++I+ G+C ++ A+ Y D+ + V N
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLIN--GLCKNHKMEEALSLYHDMFLEGVIAN 516
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+N+L++ + ++ ++ M G D +YN L+KA C G ++ G
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV---EKGLG 573
Query: 349 EVKHLEAKGV----------------------------------LKLDVFTYSTIVKVFA 374
+ + KG+ L D+ TY++++
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
Q A + + S G+ P+ IT+++LI+ + G+ A L + + +G PN
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 693
Query: 435 CCNILLQACVEACQFDRAF 453
+IL+ V+ + F
Sbjct: 694 TWSILINYIVKKIPWGARF 712
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 190/471 (40%), Gaps = 76/471 (16%)
Query: 115 MVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMF 174
MVA G R G D V + +++ ELG+AP D F+ L + + F
Sbjct: 250 MVACG-----RCGAGDTAVELFEEMKELGLAP----DNITFRGLVSATTAAGKWKAAQSF 300
Query: 175 VGLMEVLEEFRLPVKELDE-EFRIVQLCVNKPDVNL---AIRYACIVPRAD---ILFCNF 227
+ LM+ F + E E ++ + ++ + L I C PR + L C
Sbjct: 301 INLMQA-GGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGC-EPRLENYNALLC-- 356
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ K + A+R ++ +P+ +++ C G K+ A+ E ++ N
Sbjct: 357 --AYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNF 414
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
T N+ + L+ + + T E++ +M G + ++N LL A +
Sbjct: 415 TPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSA--YEKGRQWKRV 472
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+Y ++ E GV KLDV +ST + A A WQ+A K M +G PN +T+SSLI
Sbjct: 473 LY-TIEKQEELGV-KLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLI 530
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A + GL +A +F+ ML G P+S+ C LL+A + Q D+ F S
Sbjct: 531 KAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDS------- 583
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+P R+ KP Y + AC
Sbjct: 584 ------------------------------MMP---------RYGIKPDKYAYAAIFWAC 604
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C ++ R M M G +P+ + +T LI G V+ A++ILK M
Sbjct: 605 WTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKM 655
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 196/459 (42%), Gaps = 91/459 (19%)
Query: 219 RADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D+ N V + G+ R+ +A R + A + PN ++C T+I V G ++
Sbjct: 170 RVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALK 229
Query: 278 IYEDLRSQNVTLNIYVFNSLM----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ + Q + IY FN+LM A D +E+++ M++LG+ D ++ L+ A
Sbjct: 230 LFRWMEKQGIERPIYTFNALMVACGRCGAGDT--AVELFEEMKELGLAPDNITFRGLVSA 287
Query: 334 CCLAGNTVLAQEIY------------GEVKHL-----------EAKGVLKLDVF------ 364
AG AQ GE + E+ G+L+ +
Sbjct: 288 TTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPR 347
Query: 365 --TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
Y+ ++ + W+ A++ + G TP+ ITWSSL+ ACANAG E+A+ + E
Sbjct: 348 LENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVME 407
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M + PN V C +A++ KT GN ++ +
Sbjct: 408 KMKENNFTPN----------VVSWCYLLKAYQ--------KT---------GNWEKTEEI 440
Query: 483 EHKDKQSITNT---PNFVP-NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
H S+ N+ PN V NS S+++K +K RV + +
Sbjct: 441 FH----SMLNSGCPPNEVAWNSLLSAYEKGRQWK------------------RVLYTIEK 478
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+G+ + ++W+ I A +G + A + ++ M++ G P++V Y++ IK
Sbjct: 479 QEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGL 538
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+A S+F+ M I+P+ LLRA ++ L +V
Sbjct: 539 WNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKV 577
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 19/296 (6%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L++DV + + +V + W A +V SA V PN ++LI + +A+
Sbjct: 169 LRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEAL 228
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF M + G E N L+ AC D A LF ++ L D
Sbjct: 229 KLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEE----MKELGLAPD------- 277
Query: 479 ISNMEHKDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKAL 535
N+ + S T + + + + F + + AC + L
Sbjct: 278 --NITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGL 335
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ M G P ++ L+ A + N E A++ + ++E G +PD + +++ + C
Sbjct: 336 LQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACAN 395
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + ++A ++ E+MK PN+V++ LL+A + G+ + ++ ++ M +G
Sbjct: 396 AGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEE---IFHSMLNSG 448
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 180/404 (44%), Gaps = 57/404 (14%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLK 306
+ L +PN++ +ID G+ ++R+++ ++ ++ FNSL++ +L
Sbjct: 181 EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
++ + M++ G AD+ +YN L+ C G + YG ++ +GV+ +V T+
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM---ETAYGYFAAMKREGVMA-NVVTF 296
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST V F + A+K+ M G+ N T++ LI+ AG ++ A+ L +EM++
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 427 AGCEPNSQCCNILLQA-CVE--ACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDR 478
G N +L+ C E + + R+ R+ L T + G + N+++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 479 ----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
+S M++K + + Y L++ C +
Sbjct: 417 ALGLLSEMKNK------------------------GLELDISLYGALIQGLCNVHKLDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K+L+ +M GL PN+I +T ++DAC SG V A+ +L+ + + G P+
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN---------- 502
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ L +A LF EM H + + V Y LL + G+LH+
Sbjct: 503 ---NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 543
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 161/419 (38%), Gaps = 62/419 (14%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+RA ++ PN C I+ R ++E L + NV + FN
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNV----FTFNI 193
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ +L ++ M+++G + D+ ++N L+ G +++ E++
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR--- 250
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ K DV TY+ ++ F + A M GV N +T+S+ ++A GLV
Sbjct: 251 -RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+AM LF +M G N L+ +A + D A L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV-------------- 355
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
R TY +L+ C + +A
Sbjct: 356 ---------------------------------RQGVPLNVVTYTVLVDGLCKERKVAEA 382
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
++ M G+ N + +T LI + N E AL +L M+ G+ D+ Y I+
Sbjct: 383 EDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQG 442
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L +A SL +M ++PN + Y T++ A + G +V + +A+ Q + +G
Sbjct: 443 LCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG---KVPEAIAMLQKILDSG 498
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F FV F K+ + A++ + + + N + +ID G + + ++
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q V LN+ + L++ + K +V + M+K GV A+ Y L+ + N
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A + E+K+ KG L+LD+ Y +++ + A + M +G+ PN I
Sbjct: 414 SEKALGLLSEMKN---KG-LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
++++++AC +G V +A+ + +++L +G +PN+ C N +Q
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQ 511
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK 274
VP F VR + + AL D + K P MY I++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY--HVILEAACRSGGFRN 164
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
S + E + ++ TL+ N ++N + + + + + G AD+ SYN +LK
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+A +E+ E+ ++ ++ T++T++ ++ +V M
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAP----NIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ ++++I+ G +E A + M G +PN C N +L+ A ++ A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340
Query: 453 FRLF-----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
L + L + D+ +G DR+ + + S P+ + Y++
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-MLSHGCMPDVI---TYTT 396
Query: 505 FDKRF-------------------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F KP T +Y I++K C+ V A LM++M G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ LI+ G VE A+++LK M +G SPD+++Y+T I ++ + ++A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L M + I PN + Y ++ A SR G +++V Q
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 55/373 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+ T+I G + + + + T +I ++ ++++ L+ E
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V
Sbjct: 308 ILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP----LDDVTFNILV 363
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F +++ E MLS G P+ IT++++IN GL+++A+ L + M GC+
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ I+L+ A ++ A L M +Q
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEEL--------------------------MSQMIQQGC 457
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
P T+N L+ C +A L+ +M G SP+
Sbjct: 458 ---------------------PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS++ +ID G +G E AL++L +M G+SP+ + Y++ R R+ + +F+
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDN 556
Query: 609 MKHYQIQPNLVTY 621
+K I+ + V Y
Sbjct: 557 IKDTTIRSDAVLY 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 53/337 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ V + M G D + N++L A C G E G ++ L G + D+ +Y+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQG---CVDEAVGLLRKLAFFGC-EADIVSYN 220
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++K AK W ++ ++M+ PN +T+++LI GL E+ + +M +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P+ R++ + D I H +
Sbjct: 281 GCTPD--------------------IRMYATII----------------DGICKEGHLE- 303
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
N + N S + KP YN ++K C+ + + L++EM
Sbjct: 304 -----VANEILNRMPS-----YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +++ IL+D +G V+ +++L+ M G PDV+ YTT I + + +A L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ M +PN V+Y +L+ G + ++ ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ ++ L+ FN L++ + + +
Sbjct: 319 PNVVCYNTVLK--GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M G M D+ +Y ++ C G L E +K + + G K + +Y+ +
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEG---LIDEAVMLLKSMSSCGC-KPNTVSYTIV 432
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + + A L T+ + +A +G +++
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M K + + + N+ SS KR+ TD R M +
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWE----------------TD--RAIDFFAYMVS 594
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++T+LI G + A ++L
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 121/321 (37%), Gaps = 56/321 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +YN ++ C AG A+ + V + + +T+ +V+ AL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP-------VPPNAYTFFPVVRGLCTRGRIADAL 131
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V ++M G P + ++ A +G ++ + E M GC ++ CN++L A
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
E D A L R
Sbjct: 192 CEQGCVDEAVGLLRKLAF------------------------------------------ 209
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F + +YN ++K C + V+ LM+EM V +PN +++ LI +
Sbjct: 210 -----FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRN 264
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G E ++L M E G +PD+ Y T I + L+ A + M Y ++PN+V Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
T+L+ E ++ L+
Sbjct: 325 NTVLKGLCSAERWKEAEELLS 345
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 66/437 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
F REF + D ALR + ++ P +I +I + G G K I+ED+
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+V N+Y F +L+N + ++ +L + M+K V ++ +YN +L AC G
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGG-- 166
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LD W+ L + M G+ P+ IT
Sbjct: 167 --------------------LD----------------WEGLLNLFAQMRHEGIQPDLIT 190
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++AC++ GLVEQA +F+ M ++G ++ L+ + Q R L R
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREM- 249
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDK--RFSFKPTTT 516
ED +GN I+ S+ N H ++ F + R P
Sbjct: 250 ---------ED-EGNPPDIAGY-----NSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVE 294
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY+ L++ + +V++L ++M+ + P ++ LI G G + ++ + M
Sbjct: 295 TYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y+ + VC R ++A + + M + P+L L+ S YG +
Sbjct: 355 VDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLI---SSYGKM 411
Query: 635 HEVQQCLAVYQDMWKAG 651
+ L Y + +AG
Sbjct: 412 AMYKDALVSYYRIREAG 428
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 11/226 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T++ + G G + + R+++ D++ + + +NSL+ V F ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M GV D A+Y+ LL C G T A +I+ + E+ L+ + ++
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEAS----AGLI 405
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ ++ AL + AG+ P + +LI A GL +A M +AG +
Sbjct: 406 SSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
N +++A + D A F S+ Q G + D T
Sbjct: 466 APVSSVNSVMEAYSKVGLHDEALEFF-----SELQQKEGSEVDERT 506
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 85/191 (44%), Gaps = 6/191 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ ++I+ G+ + +++ ++ ++ +++L+ + + F +
Sbjct: 256 PDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSL 315
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +M+ L +A+YN L++ + G QE + GV K D TYS ++
Sbjct: 316 FSDMKDLSTPPTVATYNSLIQ---VFGEGGYFQESINLFHDMVDSGV-KPDDATYSALLS 371
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
V + A K+ + ML+ TP+ + LI++ + + A+ + + +AG +P
Sbjct: 372 VCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP 431
Query: 432 NSQCCNILLQA 442
+ L+Q
Sbjct: 432 QVSAYDALIQG 442
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 171/397 (43%), Gaps = 32/397 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E+ R + + +N LM+ AH ++ K G+ D+ NILLK
Sbjct: 103 NRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLK 162
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-- 390
C A + A + + H + ++ D +YST++K + Q AL + M+
Sbjct: 163 CLCHAKRSDDAVNV---LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKK 219
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN ++++++I+ G V +A +LF EM+Q G P+ + + A +A D
Sbjct: 220 SGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMD 279
Query: 451 RAFRLFR---SWTLSKTQVAL-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+A + R S +V G G + M + + F NS+
Sbjct: 280 KAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYM 339
Query: 503 SSFDKRF---------------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
SS K KP TY++L+ + Y V L N M G+
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIV 399
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+H + ILIDA G G ++ A+ I M+E G+ PD Y T I R RL A
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F +M ++P+ + Y +L++ +G+L + ++ ++
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELIS 496
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 174/416 (41%), Gaps = 48/416 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+ T+I G+ K+ ++ ++ Q V ++ ++S ++ A +
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAEL 283
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ--EIYGEVKHLEAKGVLKLDVFTYST 368
V + M G D +YN C + G ++L Q E G + + +G++ D+FT ++
Sbjct: 284 VLRQMISNGFEPDKVTYN-----CMIHGYSILGQWKETAGMFREMTRRGLMP-DIFTCNS 337
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + A + + M + G P+ +T+S L++ A G V ++LF M G
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGEDYDGNTDR 478
+ NIL+ A + D A +F +WT A R
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR-----MGR 452
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+++ K Q I KP T YN L++ C VKA L+
Sbjct: 453 LADAMDKFNQMIA-----------------MGLKPDTIVYNSLIQGFCMHGNLVKAKELI 495
Query: 537 NEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + G+ PN + + +I++ G V A I ++ G PDV+ + + I
Sbjct: 496 SEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGL 555
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++++AF + + M I+P++VTY LL R G + L ++++M G
Sbjct: 556 VGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNG---RIDDGLILFREMLSKG 608
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 19/325 (5%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K T +++ M + G+M D+ + N + + C G + A E + + AKG K D+ T
Sbjct: 314 KETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF---DSMAAKG-HKPDLVT 369
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YS ++ +A + L + M G+ + ++ LI+A G++++AM +F +M
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G P++ ++ A F R RL + +A+G D + + +
Sbjct: 430 ERGVMPDAWTYGTVIAA------FSRMGRLADAMDKFNQMIAMGLKPD------TIVYNS 477
Query: 486 DKQSITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
Q N V S R +P T +N ++ + C + V+A + + + +
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ I++ LID G G +E A +L M G+ PDVV Y+ + R+ R+
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM ++P +TY +L
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHG 622
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 168/429 (39%), Gaps = 67/429 (15%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ F + L A+ ++ P+ + ++I + G+ +K++ + ++ S+ +
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503
Query: 288 TL-NIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
N FNS++N V A D+ F L ++ +G D+ ++N L+ L G
Sbjct: 504 PRPNTVFFNSIINSLCKEGRVVEAQDI-FDLVIH-----IGERPDVITFNSLIDGYGLVG 557
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
++ +G + + + G+ + DV TYS ++ + L + +MLS GV P T
Sbjct: 558 KM---EKAFGVLDAMISVGI-EPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTT 613
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFR 457
IT+ +++ N G A + EM+++G + C I+L C C D A LF+
Sbjct: 614 ITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD-DEAIALFK 672
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ M K +I NT D + +
Sbjct: 673 --------------------KLGAMNVKFNIAIINT----------MIDAMYKVRKRE-- 700
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L + + GL PN ++ ++I G+VE A + +M +
Sbjct: 701 -------------EANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKS 747
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE- 636
G +P I+V + + +A + ++ I T +L SR G E
Sbjct: 748 GCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQ 807
Query: 637 VQQCLAVYQ 645
++ A+YQ
Sbjct: 808 IKSLPAMYQ 816
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR + +F N + K+ +V A +D P++ ++ID G+ G K+
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
+ + + S + ++ +++L++ + + L +++ M GV +Y I+L
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G TV A+++ E+ +E+ +D+ T I+ A+ + + + +
Sbjct: 623 LFNDGRTVGAKKMCHEM--IESG--TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N +++I+A E+A LF+ + G PN+ +++ ++ + A
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738
Query: 454 RLF 456
+F
Sbjct: 739 NMF 741
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 163/363 (44%), Gaps = 55/363 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
++ + +N+ ++ ++ +++ D F L ++ M+ G+ AD+ +Y+ L+ C
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + ++ DV T+S ++ VF A ++ +M++ G+
Sbjct: 321 NDGKWDDGAKM---LREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+TIT++SLI+ + +A +F+ M+ GCEP+ +IL+ + +A + D RL
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
FR + + +PN T
Sbjct: 437 FREIS--------------------------------SKGLIPN---------------T 449
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C K L EM + G+ P+ +++ IL+D +G + AL+I +
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ M+ + Y I + ++ A+SLF + ++P++VTY ++ + GS
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569
Query: 634 LHE 636
L E
Sbjct: 570 LSE 572
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
+ G+C D + + ++ +N+ ++ F++L++V + K E+Y M G+
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +YN L+ C A +++ + +KG + D+ TYS ++ + AK
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMF---DLMVSKGC-EPDIVTYSILINSYCKAKRVD 431
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+++ ++ S G+ PNTIT+++L+ +G + A LF+EM+ G P+ ILL
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F S+ + +G Y+ + N D S
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDAW----------S 540
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA- 557
+ S + KP TYN+++ C +A L +M+ G +P+ ++ ILI A
Sbjct: 541 LFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 599
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
GGSG + ++++++ M+ G S D I + + +RL ++F
Sbjct: 600 LGGSGLIS-SVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLDKSF 643
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
V G C M+ I D+ + + +N Y L F V KLG D
Sbjct: 118 VLGFCKG-MELNGIEHDMYTMTIMINCYC-------RKKKLLFAFSVLGRAWKLGYEPDT 169
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+++ L+ CL G A + + ++ + D+ T ST++ AL
Sbjct: 170 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP----DLVTVSTLINGLCLKGRVSEALV 225
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + M+ G P+ +T+ ++N +G A+ LF +M + + + +I++ +
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285
Query: 445 EACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ FD A LF + + + G DG D + M ++ I N
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML---REMIGR--NI 340
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
+P+ T++ L+ + K L NEM T G++P+ I++ L
Sbjct: 341 IPD---------------VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + A Q+ +M G PD+V Y+ I ++KR+ LF E+ +
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN +TY TL+ + G L+ ++ ++Q+M G
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKE---LFQEMVSRG 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 17/240 (7%)
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V A+ LFE M+Q+ P N L A Q+D + L+ G ++D
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN------GIEHD 133
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYR 531
T I + K+ + + + + + ++P T T++ L+ C +
Sbjct: 134 MYTMTIMINCYCRKKKLLFAFSVLGRAW------KLGYEPDTITFSTLVNGFCLEGRVSE 187
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL++ M + P+ ++ + LI+ G V AL ++ M E G PD V Y +
Sbjct: 188 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 247
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S A LF +M+ I+ ++V Y ++ + + GS + L+++ +M G
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA---LSLFNEMEMKG 304
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ V G C G ++ +++++ S+ V ++ + L++ + +L L
Sbjct: 447 PNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ MQK + + YNI++ C A A ++ L KGV K DV TY+ +
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS---LSDKGV-KPDVVTYNVM 560
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAG 428
+ A + M G TP+ T++ LI A +GL+ ++ L EEM G
Sbjct: 561 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCG 619
Query: 429 CEPNSQCCNILLQACVEACQFDRAF 453
+S +++ + + D++F
Sbjct: 620 FSADSSTIKMVIDMLSDR-RLDKSF 643
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 24/377 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
I V G+C GD + ++ + + + + ++N++++ N ++ L ++ M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L++ C G A + ++ +E K + +V T+S ++ F
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSALIDAFVKEGK 341
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C PN N
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFV 497
L++ +A + D LFR +S+ + GNT + + H Q+ + V
Sbjct: 402 LIKGFCKAKRVDEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARECDNAQIV 453
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILI 555
S P TY+IL+ C + AL+ ++ + P+ ++ I+I
Sbjct: 454 FKQMVSD-----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G VE + + G+ P+VV YTT + R ++A +LF EMK
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 616 PNLVTYITLLRARSRYG 632
P+ TY TL+RA R G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 176/393 (44%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 64 DAVNLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+IL+ C LA + ++ L + D+ T ++++ F
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLNSLLNGFCHGNRISD 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + M+ G P++ T+++LI+ +A+ L + M+ GC+P+ I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + N +++ + N
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGV-VIYNTIIDALCNY-----KNVNDALNL----- 278
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TYN L++ C +Y R L+++M ++PN ++++ LIDA
Sbjct: 279 FTEMDNK-GIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL++ + V + + ++++M + G
Sbjct: 397 VTYNTLIKG---FCKAKRVDEGMELFREMSQRG 426
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 32/327 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y I++ C G+ LA + +K +E +G ++ V Y+TI+ + K
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSL---LKKME-QGKIEPGVVIYNTIIDALCNYKN 271
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M + G+ PN +T++SLI N G A L +M++ PN +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + + S+ N F
Sbjct: 332 LIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN--GFCM 373
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHI 549
+ F P TYN L+K C RV L EM GL N +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTV 432
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LI + + A + K M DG+ PD++ Y+ + + +++ A +FE +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +++P++ TY ++ + G + +
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVED 519
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 61/330 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 379
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYT 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV P+ +T+S L++ N G VE A+ +FE + ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 530
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP TY +M C + AL EM+ G
Sbjct: 531 ----------------------GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMR 575
P+ ++ LI A G+ + ++++ MR
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 143/364 (39%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK +++ +M G+ NT+T+++LI+ A + A +F++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + A +F SK +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME----------------------- 498
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 499 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T ++ G E A + + M+E+G PD Y T I+ +R + L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 607 EEMK 610
EM+
Sbjct: 595 REMR 598
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+D+ ++ +I G ++ + E ++ + +N++++
Sbjct: 7 ARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVID 66
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + G+ D ++N LL AC AG+ A+ ++ E+ HL +
Sbjct: 67 ACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSG 126
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D++TY+T V ++A +V DM + + PN +T+S+L++ + ++
Sbjct: 127 ----RDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDE 182
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L E+M G + + C N LL V+ ++D T+ + LG + D
Sbjct: 183 ALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIA------TVCEDMENLGIEKD--- 233
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
T TYN L+ V
Sbjct: 234 --------------------------------------TVTYNSLINGYGKQGRLDMVAF 255
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ DVV +++ I
Sbjct: 256 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 315
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ A SL +EM I+PN+VTY T++ A + L E
Sbjct: 316 KNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE 357
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF +S ++ +A + A+ V E M AG+ P T++++++I+AC G+ + + F
Sbjct: 23 VFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYF 82
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+MLQ G P+ + N LL AC A + A +F + LG D
Sbjct: 83 RQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVF------DEMIHLGSGRD-------- 128
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
TYN + A C + ++ +M
Sbjct: 129 ---------------------------------IYTYNTFVDAICKCGNMELATQVVLDM 155
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ PN ++++ L+D + AL++ + M+ G+ D V Y T + + V++ +
Sbjct: 156 EANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKY 215
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ E+M++ I+ + VTY +L+ + G L V + QDM G
Sbjct: 216 DEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVA---FLVQDMRAQG 264
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+ + + + + + +GK+ L + +P++ T+ID+ G + +
Sbjct: 230 IEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAF 289
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+Y D + + ++ +F+S ++ A + ++ L + M K+G+ ++ +YN ++ A
Sbjct: 290 NVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDA- 348
Query: 335 CLAGNTVLAQEIYGEVKHLEAKG---VLKLDVFTY----STIVKVFADAKWWQMALKVKE 387
+ +L +E G + + G V + T +T V++ + + L++ +
Sbjct: 349 -FGKSKILTEEDPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMRRSQELF-FILELFQ 406
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
M+ GV PN +T+S+++NAC+ E A L E++
Sbjct: 407 KMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 443
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 191/432 (44%), Gaps = 45/432 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++RA+ ++ + +N+L++ A +K +
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V ++M G D+ +YN+L C AG A + E++ L G DV TY+T+V
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL---GTALPDVVTYNTLV 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ E+M GV P +T + ++ + G +E+A+ E++ + G
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNM----EH 484
P+ N L+ A +A +AF TL V G D T + N+ +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAF------TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 485 KDKQSITNTP---NFVPN---------SHYSSFDKRFSFK-----------PTTTTYNIL 521
+D + + ++P FVP+ +++ ++ + + P+ +TYN L
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C +A+ +NE GL P+ ++ I+I A G++E A + M E+
Sbjct: 531 IKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV T + +L +A LFE + +++TY TL+++ + G +V
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG---DVDT 647
Query: 640 CLAVYQDMWKAG 651
L + DM G
Sbjct: 648 ALHFFDDMEVKG 659
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 154/357 (43%), Gaps = 63/357 (17%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ R + L++ N V ++L + + +L+V++++ +L + + ++N+L+
Sbjct: 163 RRRGVRPSLQAANA-----VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G + + ++ G L D TY+T++ A + M G
Sbjct: 218 HCSKGTLA---DALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P T+++L++A A G ++QA + E M G EP+ + N+L +A + D AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL KD+ ++ + P
Sbjct: 334 RL-----------------------------KDE-----------------MERLGTALP 347
Query: 514 TTTTYNILMKAC-----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ AC +D R L+ EMR G+ P ++ I++ + G +E AL
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALR---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L+ + E+G++PDV+ Y T I ++ + +AF+L +EM ++ + T T+L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+++ +P+ +P + F + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+ DG++P Y T + R +KQA
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M Y +P+L TY L + G + E
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA 332
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 143/356 (40%), Gaps = 57/356 (16%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+ K+ L AL + + +P++ T+ID G+ K+ + +++ + +
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 288 TLNIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + N+++ N +K E+ + + G + D SY ++ A N A
Sbjct: 451 KMDTFTLNTVL-YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ +E K L + TY+T++K + + A+ + + G+ P+ T++ +
Sbjct: 510 RLWDQM--IERK--LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G +E A +M++ +P+ CN L+ + D+A +LF SW
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW----- 620
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G+ D TYN L+++
Sbjct: 621 -VEKGKKVD-----------------------------------------VITYNTLIQS 638
Query: 525 CCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C D ++M GL P+ ++ +++ A +G E A +L + + G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTV---GLSPNHISWTILIDACG 559
S +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 160 SLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC 219
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+ A +R G ++Q V + M G
Sbjct: 280 TYNTLVSAFARLGW---IKQATKVVESMTAYG 308
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 145/332 (43%), Gaps = 28/332 (8%)
Query: 120 IVKSI-REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLM 178
+VKS+ +EG+++ +G L+K+ E G+AP + + L+ C+ +G V LM
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT---LIDAYCK----AGNVAKAFTLM 442
Query: 179 EVLEEFRLPVKELDEEFRIVQLCVNK-----PDVNLAIRYACIVPRADILFCNFVREFGK 233
+ + L + + LC K ++ + VP ++ + + + K
Sbjct: 443 DEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD-EVSYGTVMAAYFK 501
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
+ + ALR +D + P++ T+I G+C AI D ++ V +
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIK--GLCRMERLKEAI--DKLNEFVEKGLVP 557
Query: 294 FNSLMNVNAH------DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ N+ H DL+ + M + D+ + N L+ CL G A +++
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ KG K+DV TY+T+++ AL +DM G+ P+ T++ +++A
Sbjct: 618 ---ESWVEKGK-KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ AG E+A ++ ++ +G S C +L
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLL 705
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ + K+ DL +A R ++ ++ P++ C T+++ + G K+ ++E +
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+++ +N+L+ D+ L + +M+ G+ D +YN++L A AG + +
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS---E 681
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI-TWSS 403
E + + L G L F + AD + E S N + T+
Sbjct: 682 EAHNMLHKLADSGKLS-QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYME 740
Query: 404 LINACANAGLVEQAMHLFEEMLQAG 428
+N G +++A + +EM+Q G
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKG 765
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M +LG+ + A+YN LL C N + AQEI+ E+ +GVL D+ ++S++
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR---RGVLP-DLVSFSSL 403
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A AL +M +G+ P+ + ++ LI+ G + A+ + +EML GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
+ N L + F A LF + T + G DGN D+ N
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC 526
+ ++ N+ F K R P +Y ++ C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +AL ++M G+ PN ++ LI SG++ A + L M +G+ PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+Y T I ++ L++AF L EM+ +Q N++TY +L G + E +Q L
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 18/337 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A L+ E ++ +++ GV + + N LL G LA EIYGEV +G +
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV----VRGGI 253
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+L+V+T + +V + ++ + DM GV + +T+++LINA GLVE+A
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L G EP N +L + ++DRA + + Q+ L + +
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA----KDVLIEMLQLGLTPNAATYNTLL 369
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN-- 537
+ +D N + R P +++ L+ + + +ALM+
Sbjct: 370 VEICRRD--------NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR 421
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+++ +TILID +G + AL++ M G DVV Y T + + K
Sbjct: 422 EMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK 481
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A LF EM + P+ T+ TL+R + G++
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 59/400 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
F + + + L AL + ++ P+ I +ID G C + S A+ ++
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID--GFCRNGALSDALKMRDE 457
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGN 339
+ ++ +++ +N+ +N F ++ M + G++ D ++ L++ C GN
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + + LK D TY+T++ F A A ++ +DM+ + P+ I
Sbjct: 518 MDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +++N ++GL+ +A++L ++ML+ G PN CN L++ + +A+
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY---- 629
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
LSK ISN +P+S +YN
Sbjct: 630 -LSKM--------------ISN-------------GIIPDSF---------------SYN 646
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + KA L+NEM GL N I++ ++++ G ++ A Q+L+ M E
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++PD Y++ I V +K+AF +EM + P+
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
IY ++ + LN+Y N ++N D KF + +M+ GV AD+ +YN L+ A C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G L +E + + ++G ++ + TY+ I+ + A V +ML G+T
Sbjct: 304 REG---LVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+++L+ + +A +F+EM + G P+ + L+ +A
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
FR S L + + N ++ +D+ R
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-----------------ARG 462
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F TYN + C + L NEM G+ P+ ++T LI GN++ A
Sbjct: 463 CFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + + M + PD V Y T I ++ + +A L+++M I P+ ++Y T+L
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 628 RSRYGSLHE 636
G L E
Sbjct: 582 FCSSGLLPE 590
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 176/389 (45%), Gaps = 35/389 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++++ I++++ + V ++ F+SL+ V N H L L ++ M++ G++ D Y I
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH-LYQALMHFREMERSGIVPDNVIYTI 437
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G A ++ E + A+G +DV TY+T + K + A + +M
Sbjct: 438 LIDGFCRNGALSDALKMRDE---MLARGCF-MDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ P+ T+++LI G +++A++LFE M++ +P+ N L+ +A +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---TPNFVPNSHYSSFD 506
RA L+ D I +H ++ N + +P + + D
Sbjct: 554 GRAKELWDDMI--------------RKDIIP--DHISYGTVLNGFCSSGLLPEA-LNLCD 596
Query: 507 KRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ +P T N L+K C D + +++M + G+ P+ S+ LID
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E A ++ M + G+ +++ Y + ++++A + +M I P+ TY
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ + S +++ + +M + G
Sbjct: 717 SLING---HVSQDNMKEAFRFHDEMLQRG 742
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y +V+ + AK + + + + GV+ + + L+ G V+ A ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N NI++ A + +F+ +S+ME K
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFF-----------------------LSDMEGK 286
Query: 486 DKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
+ T N + N++ +SF R +P TYN ++ C Y R
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDR 345
Query: 532 VKALMNEMRTVGLSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
K ++ EM +GL+PN ++ T+L++ C N+ A +I M G+ PD+V++++ I
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEIC-RRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
V R+ L QA F EM+ I P+ V Y L+ R G+L +
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R + K ++ AL ++A + P+ T+ID G C G+ +++ +++D
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID--GFCKAGEMGRAKELWDD 562
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +++ + + +++N ++ L L + M + G+ ++ + N L+K C +G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 340 TVLAQE--------------------IYGEVKH------------LEAKGVLKLDVFTYS 367
A E I G +K +E +G L+ ++ TY+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYN 681
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F Q A +V M+ G+ P+ T+SSLIN + +++A +EMLQ
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 742 GLVPDDR 748
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T NI++ A C D + V +++M G+ + +++ LI+A G VE A Q+L
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
GM P ++ Y + + + +A + EM + PN TY TLL R ++
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 635 HEVQQCLAVYQDMWKAG 651
E Q+ ++ +M + G
Sbjct: 379 LEAQE---IFDEMSRRG 392
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N + I+++A E + L M G+ D+V Y T I R +++A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F L ++P L+TY +L + G + L
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 67/418 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 MGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 67/418 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 67/418 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS---- 504
+ W +K + +E D+ +T F + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M +LG+ + A+YN LL C N + AQEI+ E+ +GVL D+ ++S++
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR---RGVLP-DLVSFSSL 403
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ V A AL +M +G+ P+ + ++ LI+ G + A+ + +EML GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
+ N L + F A LF + T + G DGN D+ N
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC 526
+ ++ N+ F K R P +Y ++ C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +AL ++M G+ PN ++ LI SG++ A + L M +G+ PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+Y T I ++ L++AF L EM+ +Q N++TY +L G + E +Q L
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 18/337 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A L+ E ++ +++ GV + + N LL G LA EIYGEV +G +
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV----VRGGI 253
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+L+V+T + +V + ++ + DM GV + +T+++LINA GLVE+A
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L G EP N +L + ++DRA + + Q+ L + +
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA----KDVLIEMLQLGLTPNAATYNTLL 369
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN-- 537
+ +D N + R P +++ L+ + + +ALM+
Sbjct: 370 VEICRRD--------NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR 421
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P+++ +TILID +G + AL++ M G DVV Y T + + K
Sbjct: 422 EMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK 481
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A LF EM + P+ T+ TL+R + G++
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 176/401 (43%), Gaps = 61/401 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMKSRAIYE 280
F + + + L AL + ++ P+ I +ID C G D +K R +
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR---D 456
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ +++ +N+ +N F ++ M + G++ D ++ L++ C G
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A ++ + + LK D TY+T++ F A A ++ +DM+ + P+
Sbjct: 517 NMDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I++ +++N ++GL+ +A++L ++ML+ G PN CN L++ + +A+
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY--- 629
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
LSK ISN +P+S +Y
Sbjct: 630 --LSKM--------------ISN-------------GIIPDSF---------------SY 645
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ + KA L+NEM GL N I++ ++++ G ++ A Q+L+ M E
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G++PD Y++ I V +K+AF +EM + P+
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
IY ++ + LN+Y N ++N D KF + +M+ GV AD+ +YN L+ A C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G L +E + + ++G ++ + TY+ I+ + A V +ML G+T
Sbjct: 304 REG---LVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN T+++L+ + +A +F+EM + G P+ + L+ +A
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
FR S L + + N ++ +D+ R
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-----------------ARG 462
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F TYN + C + L NEM G+ P+ ++T LI GN++ A
Sbjct: 463 CFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + + M + PD V Y T I ++ + +A L+++M I P+ ++Y T+L
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 628 RSRYGSLHE 636
G L E
Sbjct: 582 FCSSGLLPE 590
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 176/389 (45%), Gaps = 35/389 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
++++ I++++ + V ++ F+SL+ V N H L L ++ M++ G++ D Y I
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH-LYQALMHFREMERSGIVPDNVIYTI 437
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G A ++ E + A+G +DV TY+T + K + A + +M
Sbjct: 438 LIDGFCRNGALSDALKMRDE---MLARGCF-MDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ P+ T+++LI G +++A++LFE M++ +P+ N L+ +A +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---TPNFVPNSHYSSFD 506
RA L+ D I +H ++ N + +P + + D
Sbjct: 554 GRAKELWDDMI--------------RKDIIP--DHISYGTVLNGFCSSGLLPEA-LNLCD 596
Query: 507 KRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ +P T N L+K C D + +++M + G+ P+ S+ LID
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E A ++ M + G+ +++ Y + ++++A + +M I P+ TY
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ + S +++ + +M + G
Sbjct: 717 SLING---HVSQDNMKEAFRFHDEMLQRG 742
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y +V+ + AK + + + + GV+ + + L+ G V+ A ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N NI++ A + +F+ +S+ME K
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFF-----------------------LSDMEGK 286
Query: 486 DKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
+ T N + N++ +SF R +P TYN ++ C Y R
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDR 345
Query: 532 VKALMNEMRTVGLSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
K ++ EM +GL+PN ++ T+L++ C N+ A +I M G+ PD+V++++ I
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEIC-RRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
V R+ L QA F EM+ I P+ V Y L+ R G+L +
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R + K ++ AL ++A + P+ T+ID G C G+ +++ +++D
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID--GFCKAGEMGRAKELWDD 562
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +++ + + +++N ++ L L + M + G+ ++ + N L+K C +G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 340 TVLAQE--------------------IYGEVKH------------LEAKGVLKLDVFTYS 367
A E I G +K +E +G L+ ++ TY+
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG-LQFNIITYN 681
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ F Q A +V M+ G+ P+ T+SSLIN + +++A +EMLQ
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 428 GCEPNSQ 434
G P+ +
Sbjct: 742 GLVPDDR 748
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T NI++ A C D + V +++M G+ + +++ LI+A G VE A Q+L
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
GM P ++ Y + + + +A + EM + PN TY TLL R ++
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 635 HEVQQCLAVYQDMWKAG 651
E Q+ ++ +M + G
Sbjct: 379 LEAQE---IFDEMSRRG 392
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N + I+++A E + L M G+ D+V Y T I R +++A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F L ++P L+TY +L + G + L
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITN--TP-NFVPN 499
+ D+A +F R L+ V G + R+ + +Q I +P N V N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 500 SHYSS---FDKRFSFKP------------TTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
S S FDK K T +N ++ + C + +++ L + M +
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ I+++ LID +G ++ A ++L M GM PD V Y T I + R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM+ + P+++TY +L+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQG 593
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 67/418 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V ++ +Y IL
Sbjct: 38 ARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGIL 97
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ +CC AG L G V + + G
Sbjct: 98 IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLINACANAGLVE 415
+ +VF+Y+ ++K D Q AL++ + M G P+ ++++++IN G ++
Sbjct: 158 CIP-NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALG 469
+A + EML G PN + ++ A +A D+A + S + +T ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276
Query: 470 EDYDGNTDRISNMEH-KDKQSITNTPNFV-----------------PNSHYSSFDKRFSF 511
Y + + K S P+ V + S KR
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GL 335
Query: 512 KPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TTY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ MR+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 53/432 (12%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFD 458
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP--NFVPNSHYSS---- 504
+ W +K + +E D+ +T N + +SH
Sbjct: 459 K-------WDKAKELI---------------LEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 505 -----FD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
FD R KP TY+ L+ C +A L+ M +VG+ P+ +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +E AL + + M G+SPD++ Y ++ +++R A L+ + Q
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 616 PNLVTYITLLRA 627
L TY +L
Sbjct: 617 LELSTYNIILHG 628
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R ++ SP + ++I I + K++ + ++ + + L+ FNS+++
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ + + + +++ M ++GV D+ +Y+ L+ CLAG A ++ + +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG--- 544
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+K D TY+T++ + + AL + +M S+GV+P+ IT++ ++ A
Sbjct: 545 -MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
L+ + ++G + NI+L + D A R+F++ L+ Q+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++D + V K+ + G+ P + G+ +L C+ SG VE + E + +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL---CK----SGRVEDAMRYFEQMIDE 438
Query: 185 RLPVKELDEEFRIVQLCV-NKPD------VNLAIRYACIVPRADILFCNFVREFGKKRDL 237
RL + I LC+ +K D + + R C+ I F + + K+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFFNSIIDSHCKEGRV 495
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+ + + +D + P++ T+ID + G ++ + + S + + +N+L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N ++ L +++ M+ GV D+ +YNI+L+ T A+E+Y +
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI----T 611
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ +L++ TY+ I+ AL++ +++ + T T++ +I A G +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 416 QAMHLFE-----------------------------------EMLQAGCEPNSQCCNILL 440
+A LF M + GC NS+ N ++
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 441 QACVEACQFDRA 452
+ ++ RA
Sbjct: 732 RKLLQRGDITRA 743
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 183/455 (40%), Gaps = 58/455 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLN 290
++ D + A R +D + P + I +I G+CG+ S A ++ +R+ + N
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR--GLCGESRISEAESMFRTMRNSGMLPN 262
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA-------------------------- 322
+Y +N++M+ +K LE+Y+ M G++
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI 322
Query: 323 DMAS---------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
DMAS YN L+ C AGN A ++ E++ E + DVFTYS ++K
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE----ILPDVFTYSILIKGL 378
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + ++M G PN +T+++LI+ G +E+A+ + +M + G EPN
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHK 485
+ L+ +A + + A L+ + + T + G DGNT + HK
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL-HK 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ Q PN S D + + + TD K NE+ S
Sbjct: 498 EMQEAGLHPNVFTLS--CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT--NELDRSLCS 553
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PNH+ +T LI G + A + MR G+ PDV I+ R+ L+ L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
++ I PN Y L + G L +C
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALRC 648
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 53/360 (14%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY +M G ++ +Y L+ CC G+ + A ++ E+ +E K + V Y+ +
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM--IEKK--IFPTVVIYTIL 234
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A + M ++G+ PN T++++++ V++A+ L++EML G
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN IL+ C+ D R + + D S
Sbjct: 295 LPNVVTFGILIDG---LCKTDEMVSA-RKFLI------------------------DMAS 326
Query: 490 ITNTPN-FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCT--DYYR 531
PN FV N + K + P TY+IL+K C
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L+ EM+ G PN +++ LID GN+E A+++ M E G+ P+++ ++T I
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +++ A L+ EM + P++V Y L+ + G+ E ++++M +AG
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA---FRLHKEMQEAG 503
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 81/402 (20%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +ID G+C + + +R D+ S V NI+V+N L++ A +L L
Sbjct: 296 PNVVTFGILID--GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ ++K ++ D+ +Y+IL+K C +E G ++ ++ KG L + TY+T+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRM---EEADGLLQEMKKKGFLP-NAVTYNTL 409
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
+ + + A++V M G+ PN IT+S+LI+ AG +E AM L+ EM+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
+AG PN + L+ + + A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L+KT G D G S + D+ P
Sbjct: 530 LF----LAKT----GTDTTG-------------------------SKTNELDRSLC-SPN 555
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y L++ CTD ++ ++MR GL P+ + ++I + ++ + +
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ + G+ P+ Y K S LK A E++ I
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 168/403 (41%), Gaps = 56/403 (13%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
A A + SP + ++D C + A + L + +NI + N L+
Sbjct: 98 ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFC 157
Query: 301 NAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A L++ +LG + D+ SY+ILLK+ C G + A ++ + E V
Sbjct: 158 EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA--EGGAVC 215
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV YST++ F A + ++M+ G+ P+ +T+SS+++A A +++A
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M+ G PN+ N L+ Q+ A R+F+
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-------------------- 315
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LM 536
+R S P T ++LM + C Y ++K +
Sbjct: 316 ---------------------------RRHSILPDVVTLSMLMGSLCK-YGKIKEARDVF 347
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G +PN S+TI+++ G + + +M DG++PD+ + IK
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L +A +F EM+ + ++P++VTY T++ A R G + + +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A + ++ V N + +N+L+ + K + V+K M++ ++ D+ + ++L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G A++++ + KG +VF+Y+ ++ +A + + ML
Sbjct: 332 GSLCKYGKIKEARDVF---DTMAMKGQ-NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ T++ LI A AN G++++AM +F EM G +P+ ++ A + D
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQS-ITNTPNFVPNSHYSS--- 504
A F ++ + A G S ++ K+ S I N + +SS
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 505 --------------FD--KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
FD PT Y++LM C KAL + M + G+ P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + + L++ G ++ L + + M + G+ P + Y I + R A F
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
EM I N TY +LR
Sbjct: 628 HEMTESGIAMNKCTYNIVLRG 648
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 160/400 (40%), Gaps = 82/400 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++Y +I CG K+ I+ ++R V ++ + +++ + +E
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------ 352
+ M GV D +Y+ L++ C G+ + A+E+ E+ +
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 353 -----LEAKGVLKLDV--------FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++A+ + L V YS ++ + + AL+V + M+SAG+ PN +
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +L+N G +++ + LF EMLQ G +P++ NI++ EA + A F
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T ++ +A+ + TYN
Sbjct: 631 T--ESGIAMNK---------------------------------------------CTYN 643
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+++ + + L E+R + + N I+ +I + VE A + +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ P VV Y+ I ++ +++A +F M++ +P+
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ +++K M + G+ D +Y+ ++ A C A A+ ++ + KGVL +
Sbjct: 234 DVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF---LRQMVNKGVLP-NN 289
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+TY+ ++ ++ W+ A++V ++M + P+ +T S L+ + G +++A +F+
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRA--FRLFRSWTLSKTQVALGEDYDGNT--DR 478
M G PN I+L + C D F L ++ + Y N
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP------DIYTFNVLIKA 403
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
+N DK I + KP TY ++ A C A+
Sbjct: 404 YANCGMLDKAMIIFNEM-----------RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G++P+ ++ LI G++ A +++ + +GM D+V +++ I +
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ A ++F+ + + P V Y L+ Y + ++++ L V+ M AG
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG---YCLVGKMEKALRVFDAMVSAG 564
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 166/417 (39%), Gaps = 33/417 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + ++ +++++R ++ ++ + LM +K +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G ++ SY I+L G V +++ L + D++T++ ++K
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF----DLMLGDGIAPDIYTFNVLIK 402
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A+ A+ + +M GV P+ +T+ ++I A G ++ AM F +M+ G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISN-MEHKDKQ 488
+ + L+Q +A L + + N ++ M+ ++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 489 SITNTPNFVPNSHYSS------------------FDKRFS--FKPTTTTYNILMKACCTD 528
+T P + S FD S +P Y L+ C
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK- 581
Query: 529 YYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
R+ +L EM G+ P+ I + I+ID +G A M E G++ +
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Y ++ +++ +A LF+E++ ++ N++T T++ + + E + A
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFA 698
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 29/263 (11%)
Query: 216 IVPRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYIC 259
++ +A I+F N +R+ G K D+V+ A+ ++ +P+ Y
Sbjct: 409 MLDKAMIIF-NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKN 314
+I G C G +K++ + ++ + + L+I F+S++N N L ++ ++
Sbjct: 468 HCLIQ--GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN-NLCKLGRVMDAQNIFDL 524
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+G+ Y++L+ CL G A ++ + + G+ DV Y T+V +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF---DAMVSAGIEPNDV-VYGTLVNGYC 580
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
L + +ML G+ P+TI ++ +I+ AG A F EM ++G N
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640
Query: 435 CCNILLQACVEACQFDRAFRLFR 457
NI+L+ + FD A LF+
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFK 663
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 53/260 (20%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++P + T++ L++ C A E A+ F ++L+ G N N LL+ EA + D A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + TP P
Sbjct: 167 DIL---------------------------------LHRTP-------------ELGCVP 180
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGL--SPNHISWTILIDACGGSGNVEGALQ 569
+Y+IL+K+ C +A L+ M G SP+ ++++ +ID G+V A
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD 240
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G+ PD V Y++ + +++ + +A + +M + + PN TY L+
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG-- 298
Query: 630 RYGSLHEVQQCLAVYQDMWK 649
Y S + ++ + V+++M +
Sbjct: 299 -YSSTGQWKEAVRVFKEMRR 317
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
ALR +DA PN + T+++ G C G + +++ ++ + + + ++N +
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVN--GYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 298 MNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ + T+ + M + G+ + +YNI+L+ L N + I+ K L
Sbjct: 611 ID-GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG--LFKNRCFDEAIF-LFKELR 666
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A V K+++ T +T++ + + A + + +G+ P +T+S +I GLV
Sbjct: 667 AMNV-KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
E+A +F M AGCEP+S+ N +++ ++ + RA
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 196/436 (44%), Gaps = 36/436 (8%)
Query: 244 YDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
+ +K+ ++ N YI II C C + ++ A+ ++ + + + +++++M+
Sbjct: 387 FKKAKERHTNLNAYIYGNIIYAYCQAC-NMDRAEALVREMEEEGIDAPLDIYHTMMDGYT 445
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+ + L V+K +++ G + +Y L+ G A E+ +K + K +K
Sbjct: 446 MIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMK 505
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TYS ++ F K W A V ED++ G+ P+ + ++++I A G +++A+H+
Sbjct: 506 ----TYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHM 561
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF----RSWTLSKTQ----VALG--- 469
+EM + C P S+ ++ A + RA +F RS + + LG
Sbjct: 562 VKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVE 621
Query: 470 -EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT-----------T 517
+ + + M +T + + + + D +F+ T T
Sbjct: 622 KRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFT 681
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+KACC AL EM + N + ILID G++ A +++ M
Sbjct: 682 YEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN 741
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
++G+ PD+ YT+ I C ++ + +A EEM+ ++PN+ TY TL+ + SL
Sbjct: 742 QEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWAN-ASLP 800
Query: 636 EVQQCLAVYQDMWKAG 651
E + L+ ++++ AG
Sbjct: 801 E--KALSCFEELKLAG 814
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 31/395 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + + K +++ L+ ++ + L+N+ K + LEV K M
Sbjct: 436 IYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMM 495
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ +G+ +M +Y++L+ + A ++ +V K LK DV Y+ I+K F
Sbjct: 496 KSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDV----IKDGLKPDVVLYNNIIKAFCG 551
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + ++M P + T+ +I+ A AG + +A+ +F+ M ++GC P
Sbjct: 552 MGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 611
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDR----ISNME 483
N L+ VE + ++A + L+ T + G G+T + + M
Sbjct: 612 FNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR 671
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-----------TTTYNILMKACCT--DYY 530
++ Q T + + S + + T T YNIL+ D +
Sbjct: 672 NEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIW 731
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
LM +M G+ P+ ++T I+AC +G++ A + ++ M G+ P+V YTT I
Sbjct: 732 EAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLI 791
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ ++A S FEE+K ++P+ Y L+
Sbjct: 792 HGWANASLPEKALSCFEELKLAGLKPDKAVYHCLM 826
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+KR + A+ D SP+ + TI+ GD K+ + +R++ + L+++
Sbjct: 621 EKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVF 680
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +L+ + ++ L V + M + + YNIL+ G+ A ++ +
Sbjct: 681 TYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADL---M 737
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +GV + D+ TY++ + A A K E+M +AGV PN T+++LI+ AN
Sbjct: 738 QQMNQEGV-QPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWAN 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
A L E+A+ FEE+ AG +P+ + L+ + + A+
Sbjct: 797 ASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYED 281
F + F + ++ AL +D ++ P ++ + V G+ +A I ++
Sbjct: 577 FMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL--VLGLVEKRKMEKAVEILDE 634
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V+ + + + ++M+ A D E + M+ G+ D+ +Y LLKACC +G
Sbjct: 635 MALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGR 694
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNT 398
Q + + A+ + + + F Y+ ++ +A W+ A + + M GV P+
Sbjct: 695 M---QSALAVTREMNAQKIPR-NTFVYNILIDGWARRGDIWEAA-DLMQQMNQEGVQPDI 749
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T++S INAC AG + +A EEM AG +PN + L+ A ++A F
Sbjct: 750 HTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEE 809
Query: 459 WTLS 462
L+
Sbjct: 810 LKLA 813
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++ A G + +A FE M G +P+S L+ A + A
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351
Query: 456 FRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
R +++L G GN + K K+ TN ++ + ++
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY-- 409
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+AC D R +AL+ EM G+ + ++D N E
Sbjct: 410 --------------CQACNMD--RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L + K ++E G +P V+ Y I + + ++ +A + + MK I+ N+ TY L+
Sbjct: 454 LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLING 513
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ L + AV++D+ K G
Sbjct: 514 ---FLKLKDWTNAFAVFEDVIKDG 534
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 160/356 (44%), Gaps = 56/356 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E ++ + +N++++ DL+FTL ++ M K G+ D ++N LL A
Sbjct: 2 GVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAA 61
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A+ ++ E+ HL G+ + D++TY+T + ++A++V DM + G
Sbjct: 62 CSRVGHLEDARAVFDEMIHL---GIGR-DIYTYNTFIDAICKCGNMELAMQVLLDMEAKG 117
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN +T+S+LI+ + E+A+ L E+M + + C N LL V+A
Sbjct: 118 VKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKA------- 170
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
G I+N+ + ++ +
Sbjct: 171 --------------------GKYAEIANVCDEMEE--------------------LGIEK 190
Query: 514 TTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T TYN L+ V L+ +MR G++P+ ++++ LID +G A +
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 250
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+E G+ PDVV +++ I ++ ++ A SL +M I+PN+VTY ++ A
Sbjct: 251 LDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDA 306
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 167/404 (41%), Gaps = 52/404 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN+ T+ID Y ++ + E ++S + L+ +N+L+ + K+ V
Sbjct: 120 PNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANV 179
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++LG+ D +YN L+ G + + V+ + +GV V TYST++
Sbjct: 180 CDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSIL---VQDMRKRGVAP-SVLTYSTLID 235
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ A A V D +G+ P+ + +SS I+ A GL+E A+ L +M + G +P
Sbjct: 236 IYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKP 295
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ A K++V + +D + I + I
Sbjct: 296 NVVTYNAIIDA------------------FGKSKVMMEDDSEVGDMGIVGVYGG---QIV 334
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
N V S+ D R + + + IL L +M G+ PN +++
Sbjct: 335 RVANPVSRGGRSATDVR--MRRSQELFFIL------------ELFQKMVQQGVRPNVVTF 380
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL-KQAFSLFEEMK 610
+ +++AC + E A +L+ +R D Y A + V S+ + QA SLF ++
Sbjct: 381 SAILNACSRCNSFEDAALLLEQLR----LFDNFVYGVAYGLLVGSREVWSQAQSLFNQLG 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
+ Y L +G + QQ + V+++ W
Sbjct: 437 RMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWENTW 480
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 37/299 (12%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ V E M AG+ P T++++++I+AC G+ + + F +ML+ G P+ + N LL
Sbjct: 1 MGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRI---SNMEHK-----DKQSI 490
AC + A +F + +G D Y+ D I NME D ++
Sbjct: 61 ACSRVGHLEDARAVFD----EMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAK 116
Query: 491 TNTPNFVPNS----HYSSFD------------KRFSFKPTTTTYNILMK--ACCTDYYRV 532
PN V S YS + K + YN L+ Y +
Sbjct: 117 GVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEI 176
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ +EM +G+ + +++ LI+ G G ++ +++ MR+ G++P V+ Y+T I +
Sbjct: 177 ANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDI 236
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ AF+++ + K ++P++V + + + ++ G ++ L++ DM + G
Sbjct: 237 YSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGL---IEWALSLLNDMTEMG 292
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 169/405 (41%), Gaps = 81/405 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ +++ C G +RA+++++ + +IY +N+ ++ +++ ++V
Sbjct: 50 PDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQV 109
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV ++ +Y+ L+ A ++ ++K + ++LD Y+T++
Sbjct: 110 LLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMR----IQLDRVCYNTLLA 165
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A + V ++M G+ +T+T++SLIN G ++ L ++M + G P
Sbjct: 166 IYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAP 225
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ +A AF ++ + S +
Sbjct: 226 SVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLK-------------------------- 259
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
P+ V +SSF T N L++ + L+N+M +G+ PN +++
Sbjct: 260 --PDVV---LFSSF-------IDTLAKNGLIEWALS-------LLNDMTEMGIKPNVVTY 300
Query: 552 TILIDACGGSGNVEGALQILKIMRED----GMSPDVVAYTTAI-------------KVCV 594
+IDA G S K+M ED G V Y I V
Sbjct: 301 NAIIDAFGKS----------KVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDV 350
Query: 595 RSKRLKQAF---SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
R +R ++ F LF++M ++PN+VT+ +L A SR S +
Sbjct: 351 RMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFED 395
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 217 VPRADILFCNFVREFGK--KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
+ + + + + + +GK + D+VS L D K+ ++ P++ T+ID+ G +
Sbjct: 188 IEKDTVTYNSLINGYGKQGRLDIVSIL-VQDMRKRGVA-PSVLTYSTLIDIYSKAGMHGD 245
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +Y D + + ++ +F+S ++ A + +++ L + +M ++G+ ++ +YN ++
Sbjct: 246 AFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIID 305
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV----KVFADAKWWQ-----MAL 383
A G + + E EV + GV + + V + D + + L
Sbjct: 306 AF---GKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFIL 362
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ + M+ GV PN +T+S+++NAC+ E A L E++
Sbjct: 363 ELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQL 403
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 186/425 (43%), Gaps = 38/425 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G E ++ + KG+ + V+TY+ +
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGR---VDEALDMLEEMIEKGI-EPTVYTYTLPIT 311
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 489
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +LK M E G +P+V
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 606
Query: 645 QDMWK 649
DM K
Sbjct: 607 HDMEK 611
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 143/350 (40%), Gaps = 33/350 (9%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +Y M K G++ + +YN L+ C+ G A +I+ +E G L +
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF---HWMEGHGSLA-NTQ 409
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ I+K + A+ + E ML G P +T+++LIN G V A L + M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
+ GCEP+ N L+ + + + A F+ +S T + G DG
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 477 D----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYN 519
D + ME + N V N S + RFS P TY
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVING--LSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + A + ++M PN +++ LI G + A +LK M
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G++PD V +T+ I V R+ AF L M +PN TY LL+
Sbjct: 648 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K ++ +A R D K++ P+ + ++ G + +++
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N + +L++ ++ D K L + K M+++G ++ SYN ++
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I + +G+L +V TY+T++ Q A K+ DM PN
Sbjct: 564 FSEAEKI---CDKMVEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+SSLI G ++A L +EM + G P+ L+ V + D AF L R
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 290 NIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N+++N + + +F+ ++ M + G++ ++ +Y L+ C G T A +I+
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ +E + L +++TYS+++ A + ++M G+ P+ +T++SLI+
Sbjct: 607 HD---MEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF--DRAFRLFRSWTLS 462
G ++ A L M+ GC+PN + ++LL+ + C ++ F L ++ L
Sbjct: 663 FVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLG 719
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 298
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R +L V+ M K G
Sbjct: 244 CRNRNL---DLAFGVFDRMVKEG 263
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 65/387 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K R + AL + K SPN++ ++I G+C + ++ A+ ++ S N+ N
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ--GLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 291 IYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
I F+ L+N+ N + + V K M ++GV ++ +Y+ L+ L V A++
Sbjct: 332 IVTFSLLINIFCKEGNVFEAR---GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + KG K DVF+Y+ ++ + AK A ++ +M+ G+TP+ +++++LI
Sbjct: 389 LF---DVMITKGC-KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ G + +A LF+ ML G P+ +ILL + +AFRLFR+
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM------ 498
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
S Y KP YNIL+ A
Sbjct: 499 ---------------------------------QSTY--------LKPNMVMYNILIDAM 517
Query: 526 CT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + L +E+ GL PN +T +I+ G ++ AL+ + M EDG P+
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+Y I+ ++ K +A L EM+
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMR 604
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 157/379 (41%), Gaps = 58/379 (15%)
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ L I FN+L+N KF +E++ +M G D+ +Y ++ C G TV A
Sbjct: 188 LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAA 247
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ + + DV TYSTI+ + AL + M + G++PN T++SL
Sbjct: 248 GLFRKM----GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I N +A + EM+ PN ++L+ F + +F + + KT
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI------FCKEGNVFEARGVLKT 357
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF------------- 511
+G + PN V YSS +S
Sbjct: 358 MTEMGVE----------------------PNVVT---YSSLMNGYSLQAEVVEARKLFDV 392
Query: 512 ------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
KP +YNIL+ C K L NEM GL+P+ +S+ LID G
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A + K M +G PD+ Y+ + + L +AF LF M+ ++PN+V Y
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 624 LLRARSRYGSLHEVQQCLA 642
L+ A + +L E ++ +
Sbjct: 513 LIDAMCKSRNLKEARKLFS 531
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 178/411 (43%), Gaps = 40/411 (9%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
V +FG+ A+ +D P+++ TII+ G+C G+ + + ++ +
Sbjct: 205 VGKFGQ------AVELFDDMVARGYQPDVHTYTTIIN--GLCKIGETVAAAGLFRKMGEA 256
Query: 286 NVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
++ ++++++ D + L+++ M+ G+ ++ +YN L++ C A
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E+ L + ++ T+S ++ +F A V + M GV PN +T+SS
Sbjct: 317 SAMLNEMMSLN----IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
L+N + V +A LF+ M+ GC+P+ NIL+ +A + A +LF
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 461 LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L+ V+ DG R+ K +TN P TY
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN-----------------LPDLCTY 475
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+IL+ C Y KA L M++ L PN + + ILIDA S N++ A ++ +
Sbjct: 476 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G+ P+V YTT I + L +A F M+ PN +Y ++R
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 168/372 (45%), Gaps = 36/372 (9%)
Query: 291 IYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
I FN L++ + HD +L K M+ G+ D + ++L+ L
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLS--KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++ L L+L + T++T++ + A+++ +DM++ G P+ T++++I
Sbjct: 179 VLAKIIKLG----LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTII 234
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
N G A LF +M +AGC+P+ + ++ + + + + A +F S+ +K
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF-SYMKAKGI 293
Query: 466 VALGEDYDGNTDRISNMEH-KDKQSITN---TPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
Y+ + N ++ ++ N + N +PN T+++L
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN---------------IVTFSLL 338
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + + ++ M +G+ PN ++++ L++ V A ++ +M G
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDV +Y I ++KR+ +A LF EM H + P++V+Y TL+ + G L E
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458
Query: 640 CLAVYQDMWKAG 651
++++M G
Sbjct: 459 ---LFKNMLTNG 467
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + + + + ++V A + +D P+++ +I+ G C +++ ++
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILIN--GYCKAKRIGEAKQLF 425
Query: 280 EDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ Q +T +I +N+L++ AHDL +KNM G + D+ +Y+ILL
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL------FKNMLTNGNLPDLCTYSILL 479
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A ++ ++ LK ++ Y+ ++ ++ + A K+ ++
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQ----STYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN ++++IN GL+++A+ F M + GC PN N++++ ++ R
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESR 595
Query: 452 AFRL 455
A +L
Sbjct: 596 AVQL 599
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 135/337 (40%), Gaps = 70/337 (20%)
Query: 110 MLSLEMVASGIVKSI------REGRIDCVVGVLKKLNELGVAP-----LELFDGSGFKLL 158
M+SL ++ + + S+ +EG + GVLK + E+GV P L +G +
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 159 KNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV---NLAIRYAC 215
E ++L D I + C KPDV N+ I C
Sbjct: 383 VVEARKLFD---------------------------VMITKGC--KPDVFSYNILINGYC 413
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
K + + A + ++ +P++ T+ID G+C G
Sbjct: 414 -----------------KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID--GLCQLGRLR 454
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++++ + ++ ++ L++ L +++ MQ + +M YNIL+
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C + N A++++ E L +G L+ +V Y+TI+ AL+ +M
Sbjct: 515 DAMCKSRNLKEARKLFSE---LFVQG-LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
G PN +++ +I +A+ L EM + G
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 179/393 (45%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ G +KSR + +I+ FN L++ A KF L + + MQ+LG+
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D AF L +K + + Y D + H+D +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANV-VIYSTVIDSLCKYRHEDDAL----------NL 282
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ + + +P TY+ L+ +C +Y R L+++M ++PN +++ LIDA
Sbjct: 283 FTEMENK-GVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL+ + + + + ++++M + G
Sbjct: 401 VTYNTLING---FCKAKRIDEGVELFREMSQRG 430
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 32/331 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G ++ +Y +++ C G+ LA + + +EA + + +V YST++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLA---FNLLNKMEAAKI-EANVVIYSTVIDSLC 271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ AL + +M + GV PN IT+SSLI+ N A L +M++ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N L+ A V+ + A +L YD R + + S+ N
Sbjct: 332 TFNALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 373
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TYN L+ C R+ L EM GL
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK-AKRIDEGVELFREMSQRGLV 432
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M DG+ P+++ Y T + ++ +L++A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
FE ++ +++P + TY ++ + G + +
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 26/371 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + N+ +++++++ L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV ++ +Y+ L+ C A + ++ +E K + +V T++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--IERK--INPNVVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ +A + D LFR +S+ + GNT + + H Q+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFRE--MSQRGLV------GNTVTYTTLIHGFFQA 448
Query: 490 IT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ V S P TYN L+ C + KA++ ++ + P
Sbjct: 449 RDCDNAQMVFKQMVSD-----GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ I+I+ +G VE + + G+ PDV+ Y T I R ++A +LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 607 EEMKHYQIQPN 617
+M+ P+
Sbjct: 564 RKMREDGPLPD 574
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M R +L + V V N L DL F L M+ + A++ Y+ +
Sbjct: 214 DRMVQRGCQPNLVTYGV-----VVNGLCKRGDIDLAFNL--LNKMEAAKIEANVVIYSTV 266
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ + C + A ++ E +E KGV + +V TYS+++ + + W A ++ DM+
Sbjct: 267 IDSLCKYRHEDDALNLFTE---MENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ PN +T+++LI+A G + +A L++EM++ +P+ + L+ + D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F ++ + +D N + + N K K+ F S
Sbjct: 383 EAKHMF--------ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++ TT + C + + + +M + G+ PN +++ L+D +G +E A
Sbjct: 435 TVTY--TTLIHGFFQARDCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + + ++ M P + Y I+ ++ +++ + LF + ++P+++ Y T++
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G E A+++ M + G
Sbjct: 550 FCRKGLKEEAD---ALFRKMREDG 570
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 383
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+ C A E++ E+ G + TY+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG----NTVTYT 439
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T+++L++ G +E+AM +FE + ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
EP NI+++ +A + + + LF S +L +
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 140/368 (38%), Gaps = 61/368 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K R AL + + PN+ ++I + + + D
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FN+L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--- 377
Query: 340 TVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ E KH+ + K +V TY+T++ F AK +++ +M G+
Sbjct: 378 ----HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NT+T+++LI+ A + A +F++M+ G PN N LL + + ++A +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + PT
Sbjct: 494 EYLQRSKME-----------------------------------------------PTIY 506
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI+++ C L + G+ P+ I + +I G E A + + M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 575 REDGMSPD 582
REDG PD
Sbjct: 567 REDGPLPD 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 45/251 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIY 279
+ F + F K+ LV A + YD K P+++ ++I+ G C D + +++ ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMF 388
Query: 280 EDLRSQNVTLNIYVFNSLMN-------------------------------------VNA 302
E + S++ N+ +N+L+N A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D V+K M GV ++ +YN LL C G A ++ ++L+ + ++
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF---EYLQ-RSKMEPT 504
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++TY+ +++ A + + + GV P+ I ++++I+ GL E+A LF
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 423 EMLQAGCEPNS 433
+M + G P+S
Sbjct: 565 KMREDGPLPDS 575
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 197/449 (43%), Gaps = 40/449 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLN 290
K D+ L ++ K P+++I +ID G+C G M + +++++ ++ + +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ A + + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L G + D FT+S + ++ + + AL V E + +GV N T S L+NA
Sbjct: 309 EMKDL---GFVP-DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ 465
G +E+A + + G PN N ++ A +
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 466 VA----------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
+A LGE + ++ M+ K T N + + FDK F
Sbjct: 425 LAYNCLIRRFCELGE-MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SP + +LID C G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + K M + G+ ++V Y T I + +L +A L E+ ++P++ TY
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ S YG VQ+C+A+Y++M ++G
Sbjct: 604 SLI---SGYGFAGNVQRCIALYEEMKRSG 629
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 24/407 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y+ + N Y C +++ G K+ I ++ + N ++N+++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ DL + M+K G+ D +YN L++ C G A++ EV ++ K
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNKMKLK 453
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV V TY+ ++ + + + ++M G PN +++ +LIN + +
Sbjct: 454 GV-SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + +M G P + N+L+ C + + AFR + ++ L Y+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL-VTYNTLI 571
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKA 534
D +S M K ++ + + R KP TYN L+ + R A
Sbjct: 572 DGLS-MTGK----LSEAEDLLLEIS------RKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM+ G+ P ++ +LI C EG ++ E + PD++ Y +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++AF+L ++M I + TY +L+ + + G L EV+ +
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 59/447 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+ID G+ KS + E +++ ++ ++ FN+L+ A ++ V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+ LG + D +++IL A +Y +K++ +T S ++
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY----ETAVDSGVKMNAYTCSILLN 362
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ ++ G+ PN + ++++I+ C LV M + E M + G +
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-EAMEKQGMK 421
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEH--- 484
P+ N L++ E + + A + L ++ E Y+ G R +
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV-ETYNILIGGYGRKYEFDKCFD 480
Query: 485 --KDKQSITNTPNFVPNSHY------------SSFDKR----FSFKPTTTTYNILMKACC 526
K+ + PN V + KR P YN+L+ CC
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 527 T-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ D +R EM G+ N +++ LID +G + A +L + G+ P
Sbjct: 541 SKGKIEDAFRFS---KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHE---- 636
DV Y + I + +++ +L+EEMK I+P L TY L+ ++ G L E
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 637 -------------VQQCLAVYQDMWKA 650
V C AV+ DM KA
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 21/354 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 210
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ K A ++ ++ML+ + P+ IT+++LI+ AG E++
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ +A + A + + LG D T I
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK------DLGFVPDAFTFSI 324
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
D S + ++ D K T +IL+ A C + KA ++
Sbjct: 325 LF----DGYSSNEKAEAALGVYETAVDS--GVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
GL PN + + +ID G++ GA ++ M + GM PD +AY I+
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A +MK + P++ TY L+ YG +E +C + ++M G
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDILKEMEDNG 489
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 164/395 (41%), Gaps = 68/395 (17%)
Query: 204 KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
KPD + Y C++ R FC E G ++ +A + + K SP++ +I
Sbjct: 421 KPD---HLAYNCLIRR----FC----ELG---EMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGV 320
G ++ K I +++ N+ + +L+N K LE V ++M+ GV
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL-LEAQIVKRDMEDRGV 525
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ YN+L+ CC G ++ + K + KG+ +L++ TY+T++ D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKI---EDAFRFSKEMLKKGI-ELNLVTYNTLI----DGLSMT 577
Query: 381 MALKVKEDML----SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
L ED+L G+ P+ T++SLI+ AG V++ + L+EEM ++G +P +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHKDKQSIT 491
++L+ C + + RLF +L + G+ ++ N++ KQ I
Sbjct: 638 HLLISLCTKE-GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ---KQMIE 693
Query: 492 NTPNFVPNSHYSSFDKRF------------------SFKPTTTTYNILMKACC--TDYYR 531
+ ++ S + +P TYNI++K C DY
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
EM+ G L+D C G+ V G
Sbjct: 754 AYVWYREMQEKGF---------LLDVCIGNELVSG 779
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 146/344 (42%), Gaps = 56/344 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M++LG D +Y+++L A G ++ +++ + + KG K TY+TI
Sbjct: 90 ELFSEMKRLGCDPDEFTYHLILDA---MGKSMRIEDMLKIQEEMHNKGY-KSTYVTYNTI 145
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +K A+ + ++S G +P T+ L++ G +E A LF+EML+ GC
Sbjct: 146 ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGC 205
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EPN NILL A ++ LF S +Q
Sbjct: 206 EPNCAIYNILLNGYRIAGDTEKVCELFESMV--------------------------EQG 239
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ P +Y +++ C D L ++ +GL P+
Sbjct: 240 MN---------------------PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 278
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ +LI G SG +E AL + M + G++P++ Y + I ++ + +A ++E
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 338
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
E+ +PN+ TY L+R S GS + A Y M G
Sbjct: 339 ELLAKGWKPNVFTYNALIRGYSVSGS---PENAFAAYGRMIVGG 379
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 64/348 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVL--AQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ K + LGV SYN L+ C L ++ A+E++ E+K L D FTY
Sbjct: 55 ELVKKFENLGVSLKTGSYNALI--CGLVDEDLIDIAEELFSEMKRLGCDP----DEFTYH 108
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
I+ + + LK++E+M + G +T++++I+ + ++++A++L+ +++
Sbjct: 109 LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 168
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P LL ++ DGN + D
Sbjct: 169 GFSPTPCTYGPLLDGLLK---------------------------DGNIE--------DA 193
Query: 488 QSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVG 543
+++ FD+ +P YNIL+ D +V L M G
Sbjct: 194 EAL--------------FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 239
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ S+T++ID G + L K + + G+ PD++ Y I +S RL++A
Sbjct: 240 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 299
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SL+ +M+ I PNL TY +L+ + G E + +Y+++ G
Sbjct: 300 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK---MYEELLAKG 344
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN I +++ I GD K ++E + Q + +I + +++ D L L
Sbjct: 207 PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSY 266
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K + +G+ D+ +YN+L+ +G A +Y + +E KG+ +++TY++++
Sbjct: 267 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND---MEKKGIAP-NLYTYNSLIL 322
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A K+ E++L+ G PN T+++LI + +G E A + M+ GC P
Sbjct: 323 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 382
Query: 432 NS 433
NS
Sbjct: 383 NS 384
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASY 327
G+ + A+++++ N ++N L+N A D + E++++M + G+ D+ SY
Sbjct: 188 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 247
Query: 328 NILLKACCLAG--NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+++ C G N L+ K L G L+ D+ TY+ ++ + + AL +
Sbjct: 248 TVVIDTLCADGRLNDGLSY-----FKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSL 301
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G+ PN T++SLI AG +A ++EE+L G +PN N L++
Sbjct: 302 YNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSV 361
Query: 446 ACQFDRAFRLF 456
+ + AF +
Sbjct: 362 SGSPENAFAAY 372
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
+P++ +ID G + ++ L + ++ +N L++ + L+ L
Sbjct: 241 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 300
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y +M+K G+ ++ +YN L+ AG A ++Y E L AKG K +VFTY+ ++
Sbjct: 301 LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE---LLAKG-WKPNVFTYNALI 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + + A M+ G PN+ T+ L N
Sbjct: 357 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 392
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 180/409 (44%), Gaps = 33/409 (8%)
Query: 263 IDVCGICG-DYMKSRAIYEDLRSQNVTL-NIYVFNSLMNVNAHDLKF--TLEVYKNMQKL 318
I V G C ++K A DL +QN L +++ +N L+ D K + M+ L
Sbjct: 287 ILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENL 346
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
++ D+ +YN L+ C +++ E+ + +E KGV K + TY+ +VK +
Sbjct: 347 KLLPDVVTYNTLINGCFDCSSSLKGFEL---IDKMEGKGV-KPNAVTYNVVVKWYVKEGK 402
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A M +G +P+ +T+++LIN AG + +A + +EM + G + NS N
Sbjct: 403 MDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462
Query: 439 LLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNM--EHKDKQ 488
+L + D A++L S + +S + +G DG + + E K+K+
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522
Query: 489 ---SITNTPNFVPNSHYS-----SFDK-----RFSFKPTTTTYNILMKACCTDYYRVKAL 535
SI + +S S DK P TTYN ++ C + KA
Sbjct: 523 IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAF 582
Query: 536 M--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
N+M P+ + IL+ G ++ AL++ G + D V Y T I
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ R ++AF L EM+ ++ P+ TY +L A + G + E ++ ++
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMS 691
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 152/366 (41%), Gaps = 58/366 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMAD 323
C + I+ ++ ++ N+ N+L+N + + + ++ ++ KLGV +
Sbjct: 152 CNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVN 211
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++NIL+ CC+ A + G++K D +Y+TI+ V A
Sbjct: 212 TNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFP----DNVSYNTILDVLCKKGKLNEAR 267
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ DM + G+ PN T++ L++ G +++A + + M Q P+ N+L+
Sbjct: 268 DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + D AFRL D + N++
Sbjct: 328 CKDGKIDEAFRL--------------------KDEMENLK-------------------- 347
Query: 504 SFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L+ C C+ + L+++M G+ PN +++ +++
Sbjct: 348 -------LLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A L+ M E G SPD V + T I ++ RL +AF + +EM ++ N VT
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460
Query: 622 ITLLRA 627
T+L
Sbjct: 461 NTILHT 466
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 174/432 (40%), Gaps = 52/432 (12%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
D ++ AC P N ++ K +L++ +A ++ S P++Y+
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYL------- 195
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
S+AI+ D+ V +N FN L+ + L + + M+ D
Sbjct: 196 ---------SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPD 246
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
SYN +L C G A+++ ++K+ G+L + T++ +V + W + A
Sbjct: 247 NVSYNTILDVLCKKGKLNEARDLLLDMKN---NGLLP-NRNTFNILVSGYCKLGWLKEAA 302
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V + M V P+ T++ LI G +++A L +EM P+ N L+ C
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362
Query: 444 VEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
+ + F L + ++ V +G D N K ++S
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES------ 416
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
F P T+N L+ C +A +M+EM GL N ++
Sbjct: 417 --------------GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++ G ++ A ++L + G D V+Y T I + + +A L++EMK +
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522
Query: 614 IQPNLVTYITLL 625
I P+++TY T++
Sbjct: 523 IIPSIITYNTMI 534
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 165/429 (38%), Gaps = 84/429 (19%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+V+E GK + + LR + S SP+ T+I+ G ++ + +++ +
Sbjct: 397 YVKE-GKMDNAGNELRKMEESG---FSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ +N N++++ + K + YK + K G D SY L+ G +V A
Sbjct: 453 LKMNSVTLNTILHTLCGERKLD-DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E+K E + + TY+T++ + ++ ++L +G+ P+ T+++
Sbjct: 512 MKLWDEMKEKE----IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I G VE+A +M++ +P+ CNILL+ D+A +LF +W
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW---- 623
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
++ G+ D TYN ++
Sbjct: 624 --ISKGKAIDA-----------------------------------------VTYNTIIS 640
Query: 524 ACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--- 578
C + + L+ EM L P+ ++ ++ A +G ++ A + + + E G
Sbjct: 641 GLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQ 700
Query: 579 --------------------MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
P+ V ++ I + K A + +E I +
Sbjct: 701 DQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK 760
Query: 619 VTYITLLRA 627
TYI+L+
Sbjct: 761 STYISLMEG 769
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 507 KRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
KR KP T N L+ A Y KA+ +++ +G+ N ++ ILI C
Sbjct: 166 KRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIE 225
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ A+ ++ M++ PD V+Y T + V + +L +A L +MK+ + PN T+
Sbjct: 226 NKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTF 285
Query: 622 ITLLRARSRYGSLHEVQQCL------AVYQDMW 648
L+ + G L E Q + V D+W
Sbjct: 286 NILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 135/322 (41%), Gaps = 39/322 (12%)
Query: 124 IREGRIDCVVGVLKKLNELGVAP-----LELFDG--------SGFKLLKNECQRLLDSGE 170
++EG++D L+K+ E G +P L +G F+++ ++ L
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457
Query: 171 VEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE 230
V + L + E ++LD+ ++++ + + Y ++
Sbjct: 458 VTLNTILHTLCGE-----RKLDDAYKLLSSASKRGYFVDEVSYGTLI-----------MG 501
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVT 288
+ K V A++ +D K+ P++ T+I G+C ++I +L +
Sbjct: 502 YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG--GLCHSGKTDQSIDKLNELLESGLV 559
Query: 289 LNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+ +N+++ ++ + + M K D+ + NILL+ C G A ++
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ +KG +D TY+TI+ ++ A + +M + P+ T++++++
Sbjct: 620 FNT---WISKGK-AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675
Query: 407 ACANAGLVEQAMHLFEEMLQAG 428
A A+AG +++A +++ G
Sbjct: 676 ALADAGRMKEAEEFMSRIVEQG 697
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V T+I V R A +F MK ++PNL+T TL+ A RY S V A+
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199
Query: 644 YQDMWKAG 651
+ D+ K G
Sbjct: 200 FSDVIKLG 207
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 38/425 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G A ++ E+ KG+ + V+TY+ +
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE---KGI-EPTVYTYTLPIT 311
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 489
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +LK M E G +P+V
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 606
Query: 645 QDMWK 649
DM K
Sbjct: 607 HDMEK 611
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 175/427 (40%), Gaps = 47/427 (11%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ Y K PN +I+ + G + + I+ + N +N ++
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D++ + +++ M K+G + + +YN L+ GN A + +K +
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK----EN 472
Query: 358 VLKLDVFTYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ D +TY+ +V F+ KW ++ A ++M+ G+ PN +++++LI+ + G V+
Sbjct: 473 GCEPDEWTYNELVSGFS--KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL--------FRSWTLSKTQVA 467
A+ L + M + GC PN + N ++ + +F A ++ ++ T +
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G +G T + H +KR P TY+ L+ C
Sbjct: 591 DGLCRNGRTQFAFKIFH-------------------DMEKRKCL-PNLYTYSSLIYGLCQ 630
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ +A M +G P +++ L+ G A Q++K M+E G PD Y
Sbjct: 631 EGKADEA--ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 688
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + ++ + A +F ++ Q +L Y L+ A + G + E Q A++ +M
Sbjct: 689 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ---ALFDNM 745
Query: 648 ----WKA 650
W A
Sbjct: 746 LEKEWNA 752
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 128/323 (39%), Gaps = 22/323 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G+ + SY L+ G +A + +K +E G +V +Y+ ++
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL---LKRMEEMGC-NPNVESYNAVIN 556
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A K+ + M+ G+ PN IT+++LI+ G + A +F +M + C P
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N + L+ + + D A R+ +++ D + +S + K +
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAERM--------SEIGCEPTLDTYSTLVSGLCRKGR---- 664
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
F K F P Y L+ A C + AL + + G +
Sbjct: 665 ----FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI A +G VE A + M E + D + +T + ++ L L M
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780
Query: 610 KHYQIQPNLVTYITLLRARSRYG 632
+ PN+ TY+ L R SR G
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIG 803
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 298
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R +L V+ M K G
Sbjct: 244 CRNRNL---DLAFGVFDRMVKEG 263
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 59/348 (16%)
Query: 292 YVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y + +++ + +F ++ M + G + +YN L+ + A A E++ +
Sbjct: 339 YTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQ 398
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ K + D TY T++ + A A + A+++ + M +AG++P+T T+S +IN
Sbjct: 399 MQ----KAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLG 454
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AG + A LF EM++ GC PN NI++ +A + A +L+R
Sbjct: 455 KAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYR------------ 502
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D Q+ F+P TY+I+M+
Sbjct: 503 ----------------DMQNA-------------------GFEPDKVTYSIVMEVLGHSG 527
Query: 530 Y--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +A+ +EM+ P+ + +L+D G +GNVE A + + M G+ P+V
Sbjct: 528 YLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCN 587
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL----RARSRY 631
+ + +R RL A++L + M + + P+L TY LL ARS Y
Sbjct: 588 SLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPY 635
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 28/292 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
K D +TY+T+V + AK + K+ + M+ G P +T++ LI++ A + A+
Sbjct: 334 FKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAV 393
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA-LGEDYDGNTD 477
+F +M +AGCEP+ L+ +A + A +++ + Q A L D +
Sbjct: 394 EVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQ-----RMQAAGLSPDTFTYSV 448
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNIL--MKACCTDY 529
I+ + H ++ DK F P TYNI+ ++A +Y
Sbjct: 449 MINCLGKA--------------GHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNY 494
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L +M+ G P+ ++++I+++ G SG ++ A I M+ PD Y
Sbjct: 495 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLL 554
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + ++ +++A+ ++ M H + PN+ T +LL A R L + L
Sbjct: 555 VDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLL 606
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + +I+ G G + ++ +
Sbjct: 409 VTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCE 468
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q N+ +N + + A + + L++Y++MQ G D +Y+I+++ +G
Sbjct: 469 MIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGY 528
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ I+ E+K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 529 LDEAEAIFSEMK----RKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVP 584
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++A + A +L + ML G P+ Q +LL C EA
Sbjct: 585 TCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEA 631
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 6/239 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ +K P+ T+ID+ G + +Y+
Sbjct: 374 VTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQR 433
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M + G + ++ +YNI++ A N
Sbjct: 434 MQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARN 493
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A + +M P+
Sbjct: 494 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEP 549
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ L++ AG VE+A ++ ML AG PN CN LL A + + A+ L +S
Sbjct: 550 VYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQS 608
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + V+ + D + P + +I G + ++ ++
Sbjct: 341 YTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQ 400
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L F +E+Y+ MQ G+ D +Y++++ AG+
Sbjct: 401 KAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLA 460
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E+ +E V L TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 461 AADKLFCEM--IEQGCVPNL--VTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTY 516
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ ++G +++A +F EM + P+ +L+ +A ++A+ +++
Sbjct: 517 SIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQA 573
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT TYN L+ + Y A+ N+M+ G P+ +++ LID +G + A++
Sbjct: 370 QPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAME 429
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY--ITLLRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L+A
Sbjct: 430 MYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQA 489
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 490 KAR-----NYQNALKLYRDMQNAG 508
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ M+ GLSP+ +++++I+ G +G++ A ++ M E G P++V Y I +
Sbjct: 430 MYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQA 489
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+++ + A L+ +M++ +P+ VTY ++ G L E + A++ +M
Sbjct: 490 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAE---AIFSEM 539
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G + ++T ++ G + ++L M DG P VV Y I R+ L A
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+F +M+ +P+ VTY TL+ ++ G L+ + +YQ M AG
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFA---MEMYQRMQAAG 438
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 200/455 (43%), Gaps = 68/455 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN C T++D G ++ ++++ ++ + N+ N+++N + + T E+
Sbjct: 408 PNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEEL 467
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ D +Y L+ C G+ A +I E+++L V +++F S I
Sbjct: 468 FHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF--VPSVEMFN-SFITG 524
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F AK ++ +M + G++PNT+T+ +LI G + A L+ EM++ G +P
Sbjct: 525 LFI-AKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH------- 484
N C++L+ + D A + + L+ T + +D +T I + H
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQK--LADTDMI--QDCSASTLNIGKVAHIIESLAG 639
Query: 485 KDKQS-----------------ITNTPN---------FVP-NSHYSSF----------DK 507
+ QS + + N F+P N YSS D
Sbjct: 640 GNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDL 699
Query: 508 RFSFK---------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
F + P TYN L+ C + R +L N++++ G+SPN I++ LID
Sbjct: 700 AFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLID 759
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN A ++ + M ++G+ P V YT I +++A L ++M + P
Sbjct: 760 GHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDP 819
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
N +TY TL++ +R G++ + + +Y +M G
Sbjct: 820 NFITYWTLIQGYARCGNMKAITK---LYNEMHICG 851
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 141/350 (40%), Gaps = 42/350 (12%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL----EAKGVLKLDVFTY 366
V M GV +M YN ++ C G GEV+ L E +GV LD ++Y
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRM-------GEVEKLLQANEYRGV-NLDEYSY 343
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+V + + A + + M+ G T T+T+++L+N + G ++ A+ L+ ML+
Sbjct: 344 NTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLK 403
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISN 481
G PN C+ LL +A + ++A L++ + L++ V + +G R++
Sbjct: 404 RGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTE 463
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
E + K +S + TY L+ C D R + EM
Sbjct: 464 AEELFHRM-----------------KEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEM 506
Query: 540 RTVGLSPNHISWTILIDA---CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+G P+ + I SG V I M G+SP+ V Y I +
Sbjct: 507 ENLGFVPSVEMFNSFITGLFIAKQSGKVN---DIRVEMSAKGLSPNTVTYGALIAGWCKE 563
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L A L+ EM ++PNL L+ R G + E L D
Sbjct: 564 GNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLAD 613
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 55/258 (21%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+NI++ C G A+ ++ ++K KG + D FTYS+++ + + +A ++
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLK---VKGFIP-DNFTYSSLIHGCSASGSIDLAFGLR 704
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++MLSA +TPN +T++SLI + V +A+ LF ++ G PN+ N L+
Sbjct: 705 DEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLID----- 759
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSF 505
G DGNT ++ K K+ I
Sbjct: 760 ----------------------GHCKDGNTTEAFKLKQKMIKEGI--------------- 782
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+PT TY IL+ CT Y +A L+++M + PN I++ LI GN
Sbjct: 783 ------QPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGN 836
Query: 564 VEGALQILKIMREDGMSP 581
++ ++ M G+ P
Sbjct: 837 MKAITKLYNEMHICGLLP 854
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 19/247 (7%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L+ A A+AG ++ A+++F+EM +AG + CN LL V+A A +F+
Sbjct: 96 SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T L +D+ T I + + + +F+ D Y+
Sbjct: 156 RCAGT---LPDDF---TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNL------VAYH 203
Query: 520 ILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+M C T+ R L++ ++ GLSPN +++T+L+ G +E A +++K ++
Sbjct: 204 AVMDGYCRIGQTEVAR--KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIK 261
Query: 576 E-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E + + D VAY I + R++ A + +EM +Q N+ Y T++ + G +
Sbjct: 262 ENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321
Query: 635 HEVQQCL 641
EV++ L
Sbjct: 322 GEVEKLL 328
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 162/412 (39%), Gaps = 61/412 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK---LGVMADMASYNILLKAC 334
+ +++ V +N++V+N+++N L EV K +Q GV D SYN L+
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMIN-GYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGY 350
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A E + + TY+T++ F ALK+ ML GV
Sbjct: 351 CRKGFMTKAFE----TCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN I+ S+L++ AG EQA++L++E L G N N ++ + + A
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466
Query: 455 LF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH-YSSF---- 505
LF + W+ + DG ++ ++ + I FVP+ ++SF
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYC-KLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL 525
Query: 506 ----------DKRF-----SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
D R P T TY L+ C + + L EM GL PN
Sbjct: 526 FIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNL 585
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI-KVC-------------- 593
++L+ G V+ A +L+ + + M D A T I KV
Sbjct: 586 FICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSA 645
Query: 594 -----------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ R+ A +LFE++K P+ TY +L+ S GS+
Sbjct: 646 KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSI 697
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ + ++I C G + + +++ S +T NI +NSL+ + ++ + +
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ +Q G+ + +YN L+ C GNT A ++ K K ++ VFTY+ ++
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKL----KQKMIKEGIQPTVFTYTILIH 794
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+K+ + M+ V PN IT+ +LI A G ++ L+ EM G P
Sbjct: 795 GLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 28/320 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ AQ + E++ A G+L DV TY++++ +
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR---AMGLLP-DVITYNSLLNRYC 389
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T+++LI+ G + +A L EEM++ GC P+
Sbjct: 390 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVC 449
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL+ + A R F LSK L D RI + ++++TP
Sbjct: 450 TYTILMNGSRKVRNLAMA-REFFDEMLSK---GLQPDCFAYNTRICA-----ELTLSSTP 500
Query: 495 NFVPNSHYSSFDKR-----FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+F R P T TYN+++ C + K L +M + GL P+
Sbjct: 501 --------MAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++T LI A G + A ++L M DG+ P VV YT + C R L A+ F
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612
Query: 608 EMKHYQIQPNLVTYITLLRA 627
+M I+PN +TY L+ A
Sbjct: 613 KMLDVGIEPNEITYNVLIHA 632
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 167/396 (42%), Gaps = 43/396 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMA 322
G K+ A+ ++ ++ + + +N++++ A +KF M+ +G++
Sbjct: 322 GFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA-----EMRAMGLLP 376
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN LL C AGN A + G+++ + L V TY+T++ + A
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLR----RAGLAPTVLTYNTLIDGYCRLGDLAEA 432
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++KE+M+ G P+ T++ L+N + A F+EML G +P+ N + A
Sbjct: 433 RRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICA 492
Query: 443 CVEACQFDRAFRLFRSWTLS---KTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
+ AF+L L V DG T + + + + +++
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD----- 547
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
+P TY L+ A C + L+N M + GL P+ +++TIL+
Sbjct: 548 ------------GLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
C GN+ A + M + G+ P+ + Y I + R AF F EM +
Sbjct: 596 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN TY L+ R G+ + + +Y +M + G
Sbjct: 656 PNKYTYTLLIDGNCREGNWADA---IRLYFEMHQNG 688
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 150/376 (39%), Gaps = 59/376 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL ++ +P + T+ID G C GD ++R +
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID--GYCRLGDLAEARRLK 436
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ Q ++ + LMN + +L E + M G+ D +YN + A
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+T +A ++ EV L KG+ D TY+ I+ + A ++K M+S G+ P+
Sbjct: 497 SSTPMAFQLR-EVMML--KGIYP-DTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A GL+ +A L M+ G +P+ IL+ C A+ FR
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+P T
Sbjct: 613 KML-----------------------------------------------DVGIEPNEIT 625
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ A C A +EM GL+PN ++T+LID GN A+++ M
Sbjct: 626 YNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMH 685
Query: 576 EDGMSPDVVAYTTAIK 591
++G+ PD + K
Sbjct: 686 QNGIPPDYCTHNALFK 701
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 52/282 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++V DA W V +ML V P +T+++L+++ G ++A L
Sbjct: 201 DVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLL 260
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+EM G N N+++ + A +L S
Sbjct: 261 KEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-------------------- 300
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMN 537
R S K ++ TYN L+ A + + +AL
Sbjct: 301 ----------------------------RLSKKASSFTYNPLITALLERGFVRKAEALQM 332
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G+ P +++ +I E A MR G+ PDV+ Y + + ++
Sbjct: 333 EMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAG 392
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
LK+A L +++ + P ++TY TL+ R G L E ++
Sbjct: 393 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 172/402 (42%), Gaps = 59/402 (14%)
Query: 254 PNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
P + I++V G G + K + + ++S + + Y +N+L++ + +
Sbjct: 233 PTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAG 292
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V K M+ G D +YN LL + G + ++E ++ +E G + TY++++
Sbjct: 293 VLKEMKLAGFSPDKVTYNALLD---VYGKSRRSKEAMEVLQEMEGNGCPP-SIVTYNSLI 348
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + AL++K M+ G+ P+ T+++L++ AG + A+ +FEEM GC+
Sbjct: 349 SAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK 408
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L++ +F ++F ED
Sbjct: 409 PNICTFNALIKMHGNRGKFTEMMKVF-------------EDI------------------ 437
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNH 548
K F P T+N L+ + V + EM+ G P
Sbjct: 438 ----------------KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPER 481
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ LI + G+ + A+ + K M E G++PD+ +Y + R KQ+ + E
Sbjct: 482 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 541
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
MK + +PN +TY +LL A Y + E+++ A+ ++++
Sbjct: 542 MKDGRCKPNELTYCSLLHA---YANGKEIERMCALAEEIYSG 580
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 199/437 (45%), Gaps = 35/437 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + + + + + L AL + + P+++ T++ G +
Sbjct: 338 PPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQ 397
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+E++R++ NI FN+L+ ++ + KFT ++V+++++ D+ ++N LL
Sbjct: 398 IFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLS--- 454
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G + E+ G K ++ G + + T++T++ ++ + A+ V + ML AGV
Sbjct: 455 VFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN 513
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ ++++++ A A GL +Q+ + EM C+PN LL A + +R L
Sbjct: 514 PDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCAL 573
Query: 456 FRS---------WTLSKTQVALGEDYD--GNTDRISNMEHKDKQ------------SITN 492
L KT V + D T+R + +E + + SI
Sbjct: 574 AEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETER-AFLELRQRGFSPDITTLNAMVSIYG 632
Query: 493 TPNFVPNSHYSSFD--KRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNH 548
V ++ D KR F P+ TTYN L M + ++ R + ++ E+ G+ P+
Sbjct: 633 RRQMVAKAN-EILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDI 691
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
IS+ +I A +G + A ++L MRE G +PD++ Y T I +A +
Sbjct: 692 ISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCY 751
Query: 609 MKHYQIQPNLVTYITLL 625
M + +PN TY +++
Sbjct: 752 MIKHGCKPNQSTYNSIV 768
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 189/435 (43%), Gaps = 28/435 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSP---NMYICRTIIDVCGICGDYMKSRA 277
D+L V+ G + +ALR ++ + S N I II + G G + +
Sbjct: 129 DVL--GIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAAS 186
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+ +L +++Y + S++ + ++ + V+K M+++G + +YN++L
Sbjct: 187 LLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYG 246
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + ++ G V +++ G+ D +TY+T++ ++ A V ++M AG +
Sbjct: 247 KMG--MPWNKMVGLVDRMKSAGIAP-DSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFS 303
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+++L++ + ++AM + +EM GC P+ N L+ A + A L
Sbjct: 304 PDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALEL 363
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + D T +S E KDK ++ + KP
Sbjct: 364 KNQMV----EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM----------RNEGCKP 409
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N L+K + + + +++T SP+ ++W L+ G +G +
Sbjct: 410 NICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVF 469
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M+ G P+ + T I R QA ++++ M + P+L +Y +L A +R
Sbjct: 470 KEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARG 529
Query: 632 GSLHEVQQCLAVYQD 646
G + ++ LA +D
Sbjct: 530 GLWKQSEKVLAEMKD 544
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 180/417 (43%), Gaps = 31/417 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ ++DV G ++ + +++ +I +NSL++ A D L+ LE
Sbjct: 303 SPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALE 362
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M + G+ D+ +Y LL AG A +I+ E+++ +G K ++ T++ ++
Sbjct: 363 LKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN---EGC-KPNICTFNALI 418
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K+ + + +KV ED+ + +P+ +TW++L++ G+ + +F+EM +AG
Sbjct: 419 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 478
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW-------TLSKTQVALGEDYDGNTDRISN-- 481
P N L+ + FD+A +++ LS L G + S
Sbjct: 479 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 538
Query: 482 -MEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYN--ILMKAC 525
E KD + N + H + K +P +L+ +
Sbjct: 539 LAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSK 598
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C + E+R G SP+ + ++ G V A +IL M+ G +P +
Sbjct: 599 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 658
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Y + + + RS +++ + E+ I+P++++Y T++ A R G + + + L+
Sbjct: 659 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLS 715
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 53/288 (18%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ I+ + A + ++ G + ++S+I A + G +A+ +F++M +
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC+P N++L ++ W G DR+
Sbjct: 229 VGCKPTLITYNVILNV---------YGKMGMPWN----------KMVGLVDRM------- 262
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVG 543
K P + TYN L+ +CC Y ++ EM+ G
Sbjct: 263 --------------------KSAGIAPDSYTYNTLI-SCCRRGNLYEEAAGVLKEMKLAG 301
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
SP+ +++ L+D G S + A+++L+ M +G P +V Y + I R L+ A
Sbjct: 302 FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDAL 361
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +M I+P++ TY TLL + G + + + ++++M G
Sbjct: 362 ELKNQMVEKGIKPDVFTYTTLLSGFEKAG---KDKAAVQIFEEMRNEG 406
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I PRA +L V K L+ RA+ ++ SP++ ++ + G K+
Sbjct: 582 IEPRA-VLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKA 640
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
I + ++ T ++ +NSLM + + F + E+ + + G+ D+ SYN ++ A
Sbjct: 641 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYA 700
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A + E++ D+ TY+T + +A + A+ V M+ G
Sbjct: 701 YCRNGRMRDASRVLSEMRESGPAP----DIITYNTFIASYAADSMFVEAIDVVCYMIKHG 756
Query: 394 VTPNTITWSSLIN 406
PN T++S+++
Sbjct: 757 CKPNQSTYNSIVD 769
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 187/416 (44%), Gaps = 68/416 (16%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED--LRSQNVTLNIYVFNSLMN 299
RA DA + L+ R + V G+ G + +I E+ LR + VFN++M
Sbjct: 172 RALDAFE-WLARSTAPASRAVAVVLGVLG-RARQDSIAEEVFLRFAGEGATVQVFNAMMG 229
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILL----KACCLAGNTVLAQEIYGEVKHL 353
V A +F ++ M G+ D+ S+N L+ K+ CLA L ++ EV+
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL--DLLFEVR-- 285
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ L+ DV TY+T++ + + + A+ V E+M+++ P+ T++++++ G
Sbjct: 286 --QSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E+A LF E+++ G P++ N LL A + +
Sbjct: 344 AEEAERLFGELVEKGFMPDAVTYNSLLYAFAK---------------------------E 376
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYR 531
GN D++ EH ++ + + FK TYN I M
Sbjct: 377 GNVDKV---EHTCEELV-----------------KAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L +EMR VG +P+ +++T++ID+ G + A ++L+ M + G+ P +VA++ I
Sbjct: 417 AVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALIC 476
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R A F+ M ++P+ + Y+ +L +R G E ++ L +Y+ M
Sbjct: 477 AYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSG---ETEKMLRLYRTM 529
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 154/354 (43%), Gaps = 30/354 (8%)
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
QN L ++ L V A +V+ +MQ +G+ A Y ++ C G
Sbjct: 672 GQNCNLYEHLITCL--VEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLG---FP 726
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +G + G+ L++ + I+ + + + K WQ A + + + A I W+
Sbjct: 727 ETAHGLMDDALQSGI-PLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGIDRRI-WN 784
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----R 457
+LI+A A +GL E+A +F+ M++ G P N +++A + + D + +
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDM 844
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ +SK+ V L D + E + ++PN H ++ T+
Sbjct: 845 DFKISKSTVLLMLDAFAKAGDV--FEVMKIYNGMKAAGYLPNMHL--------YRSMTSL 894
Query: 518 YNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
C + +R V+ ++ EM G P+ + L++ +GN + Q+ + + E
Sbjct: 895 L------CHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILE 948
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ PD Y T I + RS R ++ F+L EM + P L +Y +LL A ++
Sbjct: 949 AGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAK 1002
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 152/353 (43%), Gaps = 55/353 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
++D GD + IY +++ N++++ S+ ++ H +F +E+ M+ G
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N LL AGN ++Y + LEA L+ D TY+T++ ++ +
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSI--LEAG--LEPDEDTYNTLIVMYCRSLRP 971
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ SL+ A A A L EQA LFEEM + N +++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMM 1031
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ +++R+ GN + N+ K+
Sbjct: 1032 M-------------KIYRN--------------AGNHSKAENLLAVMKED---------- 1054
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT T +ILM + T + + ++N +++ L + + ++ + DA
Sbjct: 1055 ----------GIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDA 1104
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ + ++ L M+ DG+ PD +T I+ ++ A L + ++
Sbjct: 1105 YLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 149/392 (38%), Gaps = 57/392 (14%)
Query: 255 NMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
N+ CR II + G + ++ + + LR Q ++ ++N+L++ A + V
Sbjct: 744 NILSCRVIIIEAYGNIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLYEKARAV 802
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ NM K G + + S N +++A + G + GE++ ++ K+ T ++
Sbjct: 803 FDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMD----FKISKSTVLLMLD 858
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA A +K+ M +AG PN + S+ + + + EM AG +P
Sbjct: 859 AFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKP 918
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL A FDR +++ QSI
Sbjct: 919 DLSIFNSLLNMYTAAGNFDRTTQVY-------------------------------QSIL 947
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
+P TYN L+ C + L+NEM GL+P
Sbjct: 948 EA----------------GLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQ 991
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S+ L+ A + E A Q+ + MR + Y +K+ + +A +L M
Sbjct: 992 SYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K I+P + T L+ + G HE + L
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPHEAENVL 1083
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 513 PTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P ++N L+ K+ C L+ E+R GL P+ I++ LI AC S N+E A+
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAV 313
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ + M PD+ Y + V R + ++A LF E+ P+ VTY +LL A
Sbjct: 314 TVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAF 373
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
++ G++ +V+ +++ KAG
Sbjct: 374 AKEGNVDKVEHTC---EELVKAG 393
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 154/359 (42%), Gaps = 26/359 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P++ T+I C + + ++E++ + +++ +N++++V+ + +
Sbjct: 291 PDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERL 350
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ + + G M D +YN LL A GN + E+ K K + TY+T++
Sbjct: 351 FGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL----VKAGFKKNEITYNTMIH 406
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ +A+ + ++M + G TP+ +T++ +I++ + +A + E+M AG +P
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKP 466
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ A + + A + F S + DR++ + D + +
Sbjct: 467 TLVAFSALICAYAKGGRRADAEKTFDCMIASGVK----------PDRLAYLVMLDVFARS 516
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHI 549
+ + + + +++P Y +L+ A + ++ ++ +M + +
Sbjct: 517 GETEKMLRLYRTMMND--NYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGV 574
Query: 550 SWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
TILI A C G ++LK G PD + + + V +++ ++ SL E
Sbjct: 575 ISTILIKARCVSQGG-----KLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLE 628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 51/350 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F K D+ ++ Y+ K PNM++ R++ + + + ++ +
Sbjct: 860 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPD 919
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +FNSL+N+ A + T +VY+++ + G+ D +YN L+ C ++ +E +
Sbjct: 920 LSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYC---RSLRPEEGFT 976
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + +G L + +Y +++ A A+ + A ++ E+M S N + ++
Sbjct: 977 LLNEMGKRG-LTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
NAG +A +L M + G EP +IL+ + A Q A + S S +V
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEV-- 1093
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
S P +T ++ +K D
Sbjct: 1094 -----------------------------------------STLPYSTVFDAYLKNGDYD 1112
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+K L+ EM+ G+ P+H WT I A A+ +LK +++ G
Sbjct: 1113 -LGIKKLL-EMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCG 1160
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
DLV+ + Y S HL P+ + ++ D+ + + +++ + V +N +V+N
Sbjct: 90 DLVNIVFDYMGSDGHL--PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYN 147
Query: 296 SLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+L++V H+ + + Y MQ D ++NIL++ C G A E++
Sbjct: 148 NLLSVLVKQNQVHEAIYLFKEYLVMQS---PPDTWTFNILIRGLCRVGGVDRAFEVF--- 201
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV-KEDMLSAGVTPNTITWSSLINACA 409
K +E+ G L DV TY+T++ A Q ++ KE + +P+ +T++S+I+
Sbjct: 202 KDMESFGCLP-DVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFC 260
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS---WTLSKTQV 466
+G +++A +LFEEM+++G +PN N+L+ + A ++R + S V
Sbjct: 261 KSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVV 320
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
DG R + H K + + K + PT TY +L+ A C
Sbjct: 321 TFTSLIDGYC-RAGQVNHGLK--------------FWNVMKTRNVSPTVYTYAVLINALC 365
Query: 527 TD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + + +++ + P + +ID +GNV+ ILK M E PD V
Sbjct: 366 KENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425
Query: 585 AYTT-AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+T I CV+ R+ +A ++F M + P+ +T +L+ + G +E
Sbjct: 426 TFTILIIGHCVKG-RMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNE 477
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 132/340 (38%), Gaps = 57/340 (16%)
Query: 325 ASYNILLKACCLAGNTVLAQEIY---GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++YN+L+++ C G+ L ++ G HL +L +V A A + M
Sbjct: 74 STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGF-------LVTWMAQASDFDM 126
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
K+ ++ V N+ +++L++ V +A++LF+E L P++ NIL++
Sbjct: 127 VKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIR 186
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
DRAF +F KD +S P+ V +
Sbjct: 187 GLCRVGGVDRAFEVF----------------------------KDMESFGCLPDVVTYNT 218
Query: 502 -----------------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ R P TY ++ C +A L EM
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN I++ +LID G GN+ A + + M S DVV +T+ I R+ ++
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHG 338
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ MK + P + TY L+ A + L+E + L
Sbjct: 339 LKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLG 378
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + F K + A ++ + PN+ +ID G G+ ++ A+Y
Sbjct: 250 VTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRK 309
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + ++ F SL++ A + L+ + M+ V + +Y +L+ A C
Sbjct: 310 MAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENR 369
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++ G++K+ + F Y+ ++ F A + ++M P+ +
Sbjct: 370 LNEARDFLGQIKN----SSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI G + +A+++F ML C P++ N L+ ++A + A+R+ R
Sbjct: 426 TFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI-RKM 484
Query: 460 TLSKTQVAL 468
L + L
Sbjct: 485 ALEDRNLGL 493
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 66/356 (18%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLK 306
+P++Y +I G+C G +R ++E + + + N VF L ++AH D +
Sbjct: 307 TPDVYTYGALIQ--GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL--IDAHCKKGDAE 362
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LE+++ M++ GV D +YN ++ C A + A I E++ L+ D TY
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR----SAGLRPDTVTY 418
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + MA+++K++M++ GV + +T+++LI+ + AG A + EM++
Sbjct: 419 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG EP++ +++ A RL + M++K
Sbjct: 479 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-----------------------EMQNKG 515
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ KP TYN++M C L+N M +G+
Sbjct: 516 R------------------------KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 551
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
SP+ I++ IL+D G V I ++ G PD+ YT+ + V+ K K
Sbjct: 552 SPDDITYNILLDGHCKHGKVT---DIEELKSAKGTVPDLGVYTSIVGEIVKKKTTK 604
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 24/369 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L + +FN LM V +L V+ MQ GV + S+N ++
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG+ A+ ++ + + GV DV+TY +++ + A V E M G+
Sbjct: 286 CRAGDLDGAETLH---RRMSEAGVTP-DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 341
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN + ++ LI+A G E + L EM + G P++ N ++ A A
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401
Query: 455 L---FRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ RS L V DG + +M + KQ++ + Y++ S
Sbjct: 402 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 461
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ D RV + EM GL P++ ++T++IDA G+V+ L++
Sbjct: 462 KAGRS-----------ADAERV---LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 507
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
LK M+ G P VV Y + + ++K A L M + + P+ +TY LL +
Sbjct: 508 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 567
Query: 631 YGSLHEVQQ 639
+G + ++++
Sbjct: 568 HGKVTDIEE 576
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 138/342 (40%), Gaps = 56/342 (16%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y + G+ + +N+L++ G AQ ++ E ++++GV + V +++T++
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDE---MQSRGVRR-TVVSFNTMIS 283
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + M AGVTP+ T+ +LI G +E A +FE+M G +P
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL+ A + + L R
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREM-------------------------------- 371
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +P TYN ++ C D ++ EMR+ GL P+ +
Sbjct: 372 ---------------RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID ++ A++I + M +G+ D V YT I ++ R A + EM
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+ TY ++ A R G +V+ L + ++M G
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKG 515
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDY 472
+A + ++L AG P ++ N+L++ V + A +F +S + +T V+
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACC--T 527
G R +++ + + +R S P TY L++ C
Sbjct: 283 SGMC-RAGDLDGAE-----------------TLHRRMSEAGVTPDVYTYGALIQGLCRVG 324
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +M G+ PN + +TILIDA G+ E L++ + MRE G+ PD V Y
Sbjct: 325 RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYN 384
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R++ LK A + EM+ ++P+ VTY TL+ Y E+ + + Q+M
Sbjct: 385 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG---YCKEEELDMAMEIKQNM 441
Query: 648 WKAG 651
G
Sbjct: 442 VAEG 445
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +ID GD ++ ++R + V + +N+++N A DLK +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ D +Y L+ C +A EI +++ A+GV LD TY+ ++
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK---QNMVAEGV-GLDEVTYTALIS 458
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A A +V +M+ AG+ P+ T++ +I+A G V+ + L +EM G +P
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+++ + Q A L + +S + DG+ + + D +
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHC---KHGKVTDIE 575
Query: 489 SITNTPNFVPN-SHYSSFDKRFSFKPTTTTYN 519
+ + VP+ Y+S K TT TY+
Sbjct: 576 ELKSAKGTVPDLGVYTSIVGEIVKKKTTKTYH 607
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 154/341 (45%), Gaps = 34/341 (9%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y LL+ C G AQ + E++ +K ++ +VF S ++ AK A
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMR---SKNLVP-NVFLCSILIDGLCKAKRSIDA 63
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L+ M +G+ +T+ +++L++ ++QA+ + EM GCEPN N L+
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 443 CVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN-----MEHKDKQSITN 492
+ + DRA LF +S S + V DG T ++ E D++S
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS--- 180
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
D R S P TY++L+ C +A L+ M+ G SP+ I+
Sbjct: 181 ----------HDMDDRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+TIL+D V A ++L+ M + G P++V Y + + R++R+ A +L +M
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN+VTY TL+ + G V+ A+ DM G
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVG---RVKDACAMLADMIDKG 326
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 189/466 (40%), Gaps = 64/466 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC---------------- 266
+ +R F + ++ A R +D + PN+++C +ID +C
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71
Query: 267 --GICGDYM----------------KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
GI D + ++ AI ++R N+ +NSL++ ++
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV---KHLEAKGVLKLDV 363
E++++M+ + M +YN LL G A ++ E+ + + +V
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A A+++ E M + G +P+ IT++ L++ V A + E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDR 478
ML AGC PN N LL A + A L R T + V G DG R
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
+ K + + + DK P YN+L+ C AL+
Sbjct: 312 V-------KDACAMLADMI--------DK--GGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ G+ P+ ++++ +I S ++ A ++L ++ G PDV+ Y+T I ++
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++ +AF L+E M ++VTY TL+ + G + E LA
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 62/395 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYE---DLRSQNV----TLNIYVFNSLMN--VNAH 303
SP+M T++D G ++ A+++ D RS ++ + N+ ++ L++ A+
Sbjct: 146 SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKAN 205
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ +E+ ++M+ G D+ +Y IL+ C A E+ E+ L+A V L
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM--LDAGCVPNL-- 261
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY++++ A+ AL + DM G TPN +T+ +LI+ G V+ A + +
Sbjct: 262 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+ G P+ N+L+ +A Q D + L R
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLR-------------------------- 355
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
++++ KP TY+ ++ C +A L+ +++
Sbjct: 356 ----RAVSG-----------------GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ I ++ LID +G V+ A + ++M DG DVV Y+T I ++ R+ +
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A L M P+ +TY +L++ L E
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 489
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 179/413 (43%), Gaps = 33/413 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ---NVTLNIYVFNS 296
A+ ++ K SP++ ++D G+C + K A +E LR N+ +NS
Sbjct: 210 AVELLESMKARGCSPDVITYTILVD--GLCKES-KVAAAWEVLREMLDAGCVPNLVTYNS 266
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ A + L + ++M G ++ +Y L+ C G A + ++ ++
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--ID 324
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D+ Y+ ++ A ++ + +S G+ P+ +T+SS+I + +
Sbjct: 325 KGGTP--DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 382
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A L + GC P+ + L+ +A + D AF L+ +V G+ D
Sbjct: 383 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY--------EVMAGDGCDA 434
Query: 475 NTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ S + + K + + + R P+T TYN L+K C + +
Sbjct: 435 DVVTYSTLIDGLCKAGRVDEAHLLLARMV-----RMGTPPSTMTYNSLIKGLCDLNHLDE 489
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-----KIMREDGMSPDVVAY 586
A L+ EM +P+ +++ ILI V+ A+ +L + + G + D +AY
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAY 549
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ I ++ R+ +A F+EM + P+ +TY LL + LHE++
Sbjct: 550 SSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH 602
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+++L+ G ++QA F+EM PN C+IL+ +A + A R
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV---------- 497
FR+ T+ T + G + D+ + H+ + PN V
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCE-PNVVTYNSLIDGLC 125
Query: 498 ----PNSHYSSFD--KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM---RTVGL-- 544
P+ F+ K P+ TYN L+ R AL EM R+ +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 545 --SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
SPN I++++LID + V A+++L+ M+ G SPDV+ YT + + ++ A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + EM PNLVTY +LL R V LA+ +DM G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRA---RRVSDALALMRDMTCRG 291
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 8/217 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
P IL+ + K + A Y+ ++ T+ID G+C G ++
Sbjct: 398 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID--GLCKAGRVDEA 455
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + + +NSL+ + + L +E+ + M++ +YNIL+
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515
Query: 334 CCLAGNTVLAQEIYGEVK-HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A + + K A G LD YS+++ A AL ++M+
Sbjct: 516 MCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHL-FEEMLQAG 428
GV P+ IT+S L+ + + + HL ++M+Q G
Sbjct: 576 GVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 172/399 (43%), Gaps = 56/399 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P ++++ + F K + +A + +D SP+ T+I G G ++
Sbjct: 359 IIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ ++ S+ + + + +L++V A ++ ++ M ++G+ ++ +Y L+
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ E++ K L+L+V Y+++V A + A+K+ ++M AG
Sbjct: 478 LCKHGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ IT++++I+A G +++A L +EML G +P N+L+ +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL W L K V P
Sbjct: 594 RLL-GWMLEKGIV----------------------------------------------P 606
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN LMK C + MR G++P+ ++ ILI + N++ A +
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
K M E G P V +Y IK + K++ +A LFEEM+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 167/384 (43%), Gaps = 21/384 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
G ++R + + L S + + + N+ ++ A++ + K + G+ + SYNI
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNI 263
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ + C G A + ++ + DV +YST++ + + ALK+ +DM
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTP----DVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ PN T++S+I G +A + EM+ P++ L+ +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F LSK + DY T I K P + + R
Sbjct: 380 RTANKWFDE-MLSK---KISPDYITYTTLIQGFGQGGKV-------IEPQNLFHEMISR- 427
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TY L+ C V A L NEM +G++PN +++ LID G ++ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L MR+ G+ +V Y + + ++ ++QA L +EM+ I P+ +TY T++ A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G + + + L Q+M G
Sbjct: 548 YCRLGDIDKAHKLL---QEMLDRG 568
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 192/433 (44%), Gaps = 49/433 (11%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
+L AL+ D + PN Y +II + G ++ + ++ SQ + + V+
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 296 SLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++ ++ + + M + D +Y L++ G + Q ++ E +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE---M 424
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
++G LK D TY+T++ V+ A A + +M+ G+TPN +T+ +LI+ G
Sbjct: 425 ISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
++ A L +EM + G + N N ++ +A ++A +L + + +VA G D D
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMK-----EMEVA-GIDPD 537
Query: 474 GNTD--------RISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T R+ +++ HK Q + + +PT T+N+LM
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDR----------------GLQPTVVTFNVLMN 581
Query: 524 ACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C D R L+ M G+ P+ I++ L+ ++ +I K MR G
Sbjct: 582 GFCMLGMLEDGDR---LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++PD Y IK +++ LK+A+ L++EM P + +Y L++ R+ ++
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIK---RFYKKKKIL 695
Query: 639 QCLAVYQDMWKAG 651
+ ++++M G
Sbjct: 696 EARELFEEMRGHG 708
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 186/428 (43%), Gaps = 42/428 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N +I ++++ G K+ A++ ++ + V L+ + +L++ +L +V
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + + ++ D YN+ + C+ G + A+ ++ +++ G LK D TY+T++
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESF---LEEMQSTG-LKPDQVTYNTMIAA 603
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ ALK+ M + + PN IT+S+LI AG VE+A +L EM +G P
Sbjct: 604 QSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED------------YDGNTDR-- 478
S +LQAC + + D + W ++ L D Y+G T +
Sbjct: 664 SLTHRRVLQACSQGRRSDLILEI-HEWMMN---AGLCADITVYNTLVRVLCYNGMTRKAM 719
Query: 479 --ISNMEHKDKQSITNTPNFVPNSHYSS--FDKRFS---------FKPTTTTYNILMKA- 524
+ M + T T N + H+ S D FS P T+N L+
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++NEM+ G+ P+++++ IL+ G N A+++ M G P V
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y I + + QA LF EM++ + P TY L+ S+ + EV++ L
Sbjct: 840 STYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL-- 897
Query: 644 YQDMWKAG 651
+DM + G
Sbjct: 898 -KDMKEKG 904
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 168/383 (43%), Gaps = 20/383 (5%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
++PN +ID +S ++ ++ S+ V +++ ++ +LM+ + K
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++++ + +Y +L+ A C AGN A+++ E +E K + +V T+S+I
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE---MEEKSI-SPNVVTFSSI 425
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ W A +M G+ PN +T+ ++I+ E A+ ++ EML G
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
E N + L+ + + ++A LFR +++ V L D+ T I
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFRE--MNERGVLL--DHVNYTTLI--------DG 533
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+ T N + P YN+ + C ++ + EM++ GL P+
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +I A G AL++L M+ + P+++ Y+T I + +++A L
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
EM P +T+ +L+A S+
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQ 676
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 39/375 (10%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
L++ +NSL++ D++ V + M+ GV D+ YN L+ C AG A+++
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
V ++ GV + +V TY+ + + A + E+M+ GV P+ +T S+L+
Sbjct: 232 ---VDTMKRDGV-EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVG 287
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
G +A LF EM + G PN +L+ +A + + + L R +
Sbjct: 288 GLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVM 347
Query: 462 SKTQVALGEDY---DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
D+ +G D +M + S +TPN V TY
Sbjct: 348 DLIMYTALMDWLCKEGKIDEAKDM-FRHALSDNHTPNGV-------------------TY 387
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ A C + + +++EM +SPN ++++ +I+ G V A ++ M+E
Sbjct: 388 TVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKE 447
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ P+VV Y T I + + A ++ EM ++ N +L+ + G + +
Sbjct: 448 RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEK 507
Query: 637 VQQCLAVYQDMWKAG 651
+ A++++M + G
Sbjct: 508 AE---ALFREMNERG 519
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 131/337 (38%), Gaps = 57/337 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K GV D + N +L C G A + EV + G+ LDV ++++V +
Sbjct: 128 MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL-AEV-MVRGGGIGGLDVVGWNSLVDGYC 185
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A V E M + GV + + ++SL+ AG V+ A + + M + G EPN
Sbjct: 186 KVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVV 245
Query: 435 CCNILLQACVEACQ---FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + VE C+ D AF L+
Sbjct: 246 TYTMFI---VEYCRRNAVDDAFSLYEEMV------------------------------- 271
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
R P T + L+ C D + AL EM +G +PNH+
Sbjct: 272 ----------------RKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ +LID + +L +L + G+ D++ YT + + ++ +A +F
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
PN VTY L+ A + G++ +Q L+ ++
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + K L +A YD H SPN+ T++ G +S + +
Sbjct: 735 ITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNE 794
Query: 282 LRSQ-----NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++ + N+T +I V N + + +Y M G + +++YN L+
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVE---AVRLYCEMVGKGFLPKVSTYNALISDFSK 851
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+E++ E+++ +GVL TY +V ++ + K +DM G +P
Sbjct: 852 VGMMSQAKELFNEMQN---RGVLPTSC-TYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ T SS+ A + G+ +A L + + +
Sbjct: 908 SKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 181/438 (41%), Gaps = 72/438 (16%)
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+L IR C + R D A +D K P+++ C ++ +
Sbjct: 125 DLLIRACCELKRGD-----------------DAFECFDMMKGKGVIPHVHACNDMLSLFL 167
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMA 325
K+ +Y ++ + ++ FN ++NV LK E M+ LG+ ++
Sbjct: 168 KSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV 227
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN ++ C G A+ I+ +K +GV K D +TY + + + A +
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMK---CRGV-KPDSYTYGSFISGMCKEGKLEEASGM 283
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
E M G+ P +T+++LI+ N G +E A ++M++ G P N+L+ A
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
C+ D A DG I M K VP+S
Sbjct: 344 DCKMDEA--------------------DG---IIKEMSEK---------GLVPDS----- 366
Query: 506 DKRFSFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TYNIL+ C C + + L +EM + G+ P +++T LI G
Sbjct: 367 ----------VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A + + + G+ PD++ + I + + +AF++ +EM ++ P+ VT+ T
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476
Query: 624 LLRARSRYGSLHEVQQCL 641
L++ R R G + ++ +
Sbjct: 477 LMQGRCREGKVEAARELI 494
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 166/390 (42%), Gaps = 59/390 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-- 299
+D K P+ Y + I G+C G ++ + E ++ + +N+L++
Sbjct: 249 FDLMKCRGVKPDSYTYGSFIS--GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
N +L+ + M + G+M +++YN+L+ A L E G +K + KG++
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL---DCKMDEADGIIKEMSEKGLV 363
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D TY+ ++ + + A + ++M+S G+ P +T++SLI + G ++QA
Sbjct: 364 P-DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LFE++++ G P+ N L+ DRAF + +
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM-------------------- 462
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
D+ + P T+N LM+ C + + L+
Sbjct: 463 ------DQMKVV---------------------PDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM++ G+ P+HIS+ LI G+++ A ++ M G +P ++ Y I+ +++
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE 555
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
A L +EM I PN TY++L+
Sbjct: 556 EGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFV--------- 175
+EG+++ G+L+K+ E+G+ P + + L+ C + G +EM
Sbjct: 273 KEGKLEEASGMLEKMKEIGLRPTAVTYNT---LIDGYCNK----GNLEMAFDYRDKMVRE 325
Query: 176 GLMEVLEEFRLPVKEL------DEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVR 229
GLM + + + + L DE I++ K V ++ Y +IL + R
Sbjct: 326 GLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY-------NILINGYCR 378
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
K+ A +D P ++I V G ++ ++E + + +
Sbjct: 379 CGNVKK----AFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +FN+L ++ H ++ + K M ++ V+ D ++N L++ C G A+E
Sbjct: 435 DLIMFNAL--IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E+K ++G+ K D +Y+T++ ++ + A +V+++MLS G P +T+++LI
Sbjct: 493 LIEEMK---SRGI-KPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A L +EM+ G PN
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPN 575
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 184/428 (42%), Gaps = 42/428 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N +I ++++ G ++ A+++D ++L+ + +L++ A D+ +
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + ++ D YN+ + C+ G A+ I E++++ LK D TY+T++
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMG----LKPDQSTYNTMIVS 598
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
ALK+ +M + + PN IT+++L+ G VE+A +L EM+ AG P+
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED------------YDGNTDRIS 480
S +LQAC ++ + D + W ++ L D Y G T + +
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDI-HEWMMN---AGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 481 NMEHK------DKQSITNTPNFVPNSHYSSFDKRFS---------FKPTTTTYNILMKA- 524
+ + +IT + + S D F+ P T+N L+
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++ EM GL PN++++ IL+ G N A+++ M G P V
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKV 834
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y I ++ + QA LF++M+ + P TY L+ SR + EV++CL
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL-- 892
Query: 644 YQDMWKAG 651
+DM + G
Sbjct: 893 -KDMKEKG 899
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 143/335 (42%), Gaps = 29/335 (8%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +N L+ C G+T A + + A+G L +DV Y+T+V F A A
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSV---ADRMTAQG-LPMDVVGYNTLVAGFCRAGQVDAA 223
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
V + M AGV PN T++ I VE+A L+E M++ G + + L+
Sbjct: 224 RGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--KDKQSITNTPNFVPNS 500
+F A+ LFR +V ++ I ++ + K+ ++ V
Sbjct: 284 LCRDGRFSEAYALFREM----DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 501 HYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
TY LM K TD VK + + LS N +++T+LID
Sbjct: 340 VVMDL----------VTYTALMDWLGKQGKTD--EVKDTLRFALSDNLSLNGVTYTVLID 387
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A + NV+ A Q+L M E +SP+VV +++ I V+ L +A MK I P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
N+VTY TL+ ++ L VY DM G
Sbjct: 448 NVVTYGTLIDGFFKF---QGQDAALEVYHDMLCEG 479
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 177/451 (39%), Gaps = 80/451 (17%)
Query: 270 GDYMKSRAIYEDLR---SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADM 324
G K+ + + LR S N++LN + L++ AH++ +V M++ + ++
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+++ ++ G A E + ++ +G+ +V TY T++ F + AL+
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYK---RMMKERGI-NPNVVTYGTLIDGFFKFQGQDAALE 470
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V DML GV N SL+N G +E+AM LF++ +G + L+
Sbjct: 471 VYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530
Query: 445 EACQFDRAFRLFRSWTLSKTQVA--------------LGEDYDGNT--DRISNMEHKDKQ 488
+A AF+ F + + + LG+ + + + NM K Q
Sbjct: 531 KAGDMPTAFK-FGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQ 589
Query: 489 SITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKAC--CTDYYRVKAL 535
S NT + SH + K S KP TYN L+ + K L
Sbjct: 590 STYNT---MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 536 MNEMRTVGLSPNHISWTILIDACGGS---------------------------------- 561
+NEM + G SP+ ++ ++ AC S
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 562 -GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G A +L+ M G++PD + + I +S L AF+ + +M H I PN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ TLL G + E L +M K+G
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLI---EMEKSG 794
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 151/350 (43%), Gaps = 21/350 (6%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L V M G+ D+ YN L+ C AG A+ G + ++ GV +V
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR---GVLDMMKEAGV-DPNV 239
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ + + K + A + E M+ GV + +T S+L+ G +A LF E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G PN L+ + +A + L +S+ V Y D +
Sbjct: 300 MDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM-VSRGVVMDLVTYTALMDWLGKQG 358
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRT 541
D+ + +T F + + S TY +L+ A C + + ++ EM
Sbjct: 359 KTDE--VKDTLRFALSDNLSL---------NGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+SPN ++++ +I+ G ++ A + ++M+E G++P+VV Y T I + +
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ +M ++ N +L+ + G ++++ +A+++D +G
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNG---KIEEAMALFKDASGSG 514
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 174/426 (40%), Gaps = 56/426 (13%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G+C G + ++ A++ ++ N + +L++ A K L + M GV
Sbjct: 281 VAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGV 340
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D+ +Y L+ G T E+ ++ + L L+ TY+ ++ A
Sbjct: 341 VMDLVTYTALMDWLGKQGKT---DEVKDTLRFALSDN-LSLNGVTYTVLIDALCKAHNVD 396
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V +M ++PN +T+SS+IN GL+++A M + G PN L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQV----------------------ALGEDYDGNTDR 478
+ D A ++ +V AL +D G+
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG-- 514
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT 527
+++H + ++ + + + D +FK P YN+ + C
Sbjct: 515 -LSLDHVNYTTLI-------DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ K+++ EMR +GL P+ ++ +I + G AL++L M+ + P+++
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T + + +++A L EM P+ +T+ +L+A S+ L + L +++
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI---LDIHE 683
Query: 646 DMWKAG 651
M AG
Sbjct: 684 WMMNAG 689
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 134/357 (37%), Gaps = 63/357 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+K + AL+ K PN+ T++ G K++ + ++ S + +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ + L L++++ M G+ AD+ YN LL+ C G T A + +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV---L 717
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G+ D T++ ++ + A ML ++PN T+++L+ +
Sbjct: 718 EEMLGSGIAP-DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A + EM ++G EPN+ +IL+ + A RL+
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY-------------- 822
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
M K F P +TYN L+ +D+
Sbjct: 823 ---------CEMVGK------------------------GFVPKVSTYNALI----SDFT 845
Query: 531 R------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ K L +M+ G+ P ++ IL+ N + LK M+E G SP
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y + QN++ NI FN+L+ + + V M+K G+ + +Y+IL+
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGH 809
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N V A +Y E + KG + V TY+ ++ F A A ++ +DM GV
Sbjct: 810 GKQSNKVEAMRLYCE---MVGKGFVP-KVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + T+ L++ + + ++M + G P+ + + +A + +A R
Sbjct: 866 HPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQR 925
Query: 455 LFRS 458
L ++
Sbjct: 926 LLKN 929
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 167/385 (43%), Gaps = 43/385 (11%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G+ D+ +YN LL
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV-----EMRAMGLQPDVITYNSLLNG 387
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AG+ A ++G+++H L V TY+ ++ + + A ++KE+M+ G
Sbjct: 388 YCKAGSLKEALLLFGDLRH----AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ T++ L+ NA + A F+EML G +P+ N ++A + +AF
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503
Query: 454 RLFRSWTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
RL L S V DG T +++ + + + N
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN---------------- 547
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+P TY L+ A C + +M + GL+P+ +++T+ I A GN+
Sbjct: 548 -GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + M E+G+ P+ + Y I R+ R + A+ F EM + PN TY L+
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ + + Y +M + G
Sbjct: 667 GNCKEGNWEDAMR---FYFEMHQNG 688
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 26/299 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++V +DA W V +ML G+ P+ +T+++L+++ G ++ L
Sbjct: 201 DVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLL 260
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA----------LG 469
+EM +GC PN N+++ + A + LSK + L
Sbjct: 261 KEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLA 320
Query: 470 EDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTT 517
+ + D + ME++ T N + + S + +P T
Sbjct: 321 KGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVIT 380
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ C +AL+ ++R GL+P +++ ILID G++E A ++ + M
Sbjct: 381 YNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMV 440
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PDV YT +K + L A F+EM +QP+ Y T +RA G++
Sbjct: 441 EQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAI 499
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ L +M S GV P+ + ++ ++A + + EMLQ G EP+ N LL
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++ + D+ L + ++ L D N I+ + K + V
Sbjct: 245 DSFLKEGRNDKVAMLLKEME-TRGSGCLPNDVTHNV-VITGLARKG--DLEEAAEMVEG- 299
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
R S K ++ TYN L+ + KA L EM G+ P +++ +I
Sbjct: 300 ------MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGL 353
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG VE A MR G+ PDV+ Y + + ++ LK+A LF +++H + P +
Sbjct: 354 LQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTV 413
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
+TY L+ R G L E ++
Sbjct: 414 LTYNILIDGYCRLGDLEEARR 434
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + + + + M G+ +D +YNIL+
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+++ ++ H L+ D TY+ ++ + + A K +DM+S
Sbjct: 527 GLCKTGNLNDAKDLQMKMVH----NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +T++ I+A G + A F +ML+ G EPN N+L+ A + A
Sbjct: 583 GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642
Query: 453 FRLFR 457
+R F
Sbjct: 643 YRHFH 647
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ E + S VT NI + N +D K ++ M G+ D +Y L+ A C
Sbjct: 510 MLEGISSDTVTYNILIDGLCKTGNLNDAK---DLQMKMVHNGLQPDCITYTCLIHAHCER 566
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G L +E K + + G L TY+ + + A ML GV PN
Sbjct: 567 G---LLREARKFFKDMISDG-LAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPN 622
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
IT++ LI+A G + A F EML+ G PN +L+ + ++ A R +
Sbjct: 623 EITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFY 681
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 41/182 (22%)
Query: 508 RFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLS--PNHISWTILIDACGGSGN 563
+ +P+ TYN L+ + + +V L+ EM T G PN ++ ++I G+
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD 289
Query: 564 VEGALQILKIMR----------------------------------EDGMSPDVVAYTTA 589
+E A ++++ MR +G+ P VV Y
Sbjct: 290 LEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAM 349
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I ++S +++ A F EM+ +QP+++TY +LL + GSL E L ++ D+
Sbjct: 350 IHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEA---LLLFGDLRH 406
Query: 650 AG 651
AG
Sbjct: 407 AG 408
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +K+M G+ +Y + + A C GN A YG + + +GV + +
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA---YGWFRKMLEEGV-EPNEI 624
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ Q+A + +ML G+ PN T++ LI+ G E AM + EM
Sbjct: 625 TYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM 684
Query: 425 LQAGCEPN 432
Q G P+
Sbjct: 685 HQNGIHPD 692
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 170/400 (42%), Gaps = 46/400 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ C ++ + S +++ + VT ++Y+F++++N + +E+
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K+GV ++ +YN ++ C G E + + +E + V K + TY ++
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRL---DEAFQFKEKMEKERV-KPSLVTYGVLIN 275
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A + ++M G PN + +++LI+ G + A+ + ++M+ G P
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISP 335
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
NS CN L+Q ++ Q + A L E +
Sbjct: 336 NSVTCNSLIQGYCKSNQMEHAEHLLE-------------------------EMLTGGGVI 370
Query: 492 NTPNFVPNSHYSSFDKRF-------------SFKPTTTTYNILMKACCTDYYRVKALMNE 538
N F H RF +FKP +L+ C + + +A+
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELW 430
Query: 539 MRTV--GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
R + G + N ++ LI +G+ E A ++LK M E G+ D ++Y T I C +
Sbjct: 431 YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++++ F L EEM IQP++ TY LL G + E
Sbjct: 491 GKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 187/435 (42%), Gaps = 40/435 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--I 278
++++ + + + ++ +AL+ D + SPN C ++I G C A +
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ--GYCKSNQMEHAEHL 359
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL--GVMADMASYNILLKACCL 336
E++ + +N F S+++ +F + M+ L + +L+ C
Sbjct: 360 LEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ 419
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A E++ L KG + T + ++ +A + A K+ ++ML G+
Sbjct: 420 NGKQSEAIELW---YRLLEKG-FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++I++++LI AC G VE+ L EEM++ G +P+ N+LL + + A L
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGL- 534
Query: 457 RSWTLSKTQVALGEDY------DG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
W K + Y DG +R+ E ++ +T
Sbjct: 535 --WHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT----------------- 575
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ Y L++A C + +A L ++MR+ G+ +++ LI G V+
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDS 635
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q+L MR++G+SP+VV YT I + ++ + S+ +EM + PN +TY ++
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695
Query: 627 ARSRYGSLHEVQQCL 641
+ G++ + L
Sbjct: 696 GHCKLGNMKAAAKLL 710
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 28/370 (7%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G+C + +S AI + L + N N+L++ A + ++ K M + G+
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D SYN L+ ACC G +E + + + +G+ + D++TY+ ++ + +
Sbjct: 474 VLDSISYNTLILACCKEGK---VEEGFKLKEEMVRRGI-QPDMYTYNMLLHGLCNMGKIE 529
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + + G P+ T+ +I+ A VE+ LF+EM+ E N+ L+
Sbjct: 530 EAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589
Query: 441 QACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+A E AFRL RS + +T Y +SN+ + ++ N +
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGIPQTSAT----YSSLIHGLSNI------GLVDSANQL 639
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+ ++ P Y L+ C ++V +++ EM + PN I++TI+I
Sbjct: 640 LDEM-----RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ GN++ A ++L M + G+ PD V Y + ++++A + + M I
Sbjct: 695 NGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGIS 754
Query: 616 PNLVTYITLL 625
+ +TY TL+
Sbjct: 755 LDDITYTTLI 764
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 26/334 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ + + G A+ + N L+ C AG+ A ++ +K + +G++ LD +Y+T
Sbjct: 427 IELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL---LKEMLERGLV-LDSISYNT 482
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + K+KE+M+ G+ P+ T++ L++ N G +E+A L+ E + G
Sbjct: 483 LILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALG---EDYDGNTDRISNM 482
P++ I++ +A + + +LF+ K + V G Y N +
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
+D P ++ YSS S + N L++EMR
Sbjct: 603 RLRDDMRSRGIPQ--TSATYSSLIHGLSNIGLVDSAN--------------QLLDEMRKE 646
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GLSPN + +T LI G + IL+ M + + P+ + YT I + +K A
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAA 706
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L EM I P+ VTY L + G + E
Sbjct: 707 AKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P ++ ++ A CT A L +M VG++PN +++ +I +G ++ A Q
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ M ++ + P +V Y I V+ +R +A + +EM PN V Y TL+ R
Sbjct: 255 KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCR 314
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G+ + L + DM G
Sbjct: 315 IGN---ISTALQIRDDMISNG 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ + L+ + + V+ + Q+ IM G++PDV ++T + R+ A
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
LF +M+ + PN+VTY ++ + G L E Q
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ 253
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 112/299 (37%), Gaps = 62/299 (20%)
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
V+ L + YST K + + ++ + + G+ P+ T + L+++ A V+ +
Sbjct: 126 VVDLLIHVYSTQFKHLG----FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMS 181
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+F+ M G P+ + ++ A + D A LFR + K VA
Sbjct: 182 YQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRK--MEKVGVA---------- 229
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRV 532
P TYN ++ C + ++
Sbjct: 230 -----------------------------------PNVVTYNNIIHGLCKNGRLDEAFQF 254
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K M + R + P+ +++ +LI+ + A ILK M + G +P+ V Y T I
Sbjct: 255 KEKMEKER---VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R + A + ++M I PN VT +L++ + + + L ++M G
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL---EEMLTGG 367
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 81/188 (43%), Gaps = 6/188 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ +R + + ++ A R D + ++I G + + ++
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDE 642
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + ++ N+ + +L+ + + + M V + +Y I++ C GN
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGN 702
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+ KG++ D TY+ + F + ALKV + M + G++ + I
Sbjct: 703 MKAAAKLLNEMAQ---KGIVP-DAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDI 758
Query: 400 TWSSLINA 407
T+++LI+
Sbjct: 759 TYTTLIDG 766
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 16/173 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
+P+ + + + + SA + D +K SPN+ +C T + + G C G K
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV-VCYTAL-IGGYCKLGQMHK 670
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLK 332
+I +++ NV N + ++N + ++K ++ M + G++ D +YN L
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
C G A +V L + G + LD TY+T++ W L V
Sbjct: 731 GFCKEGKMEEAL----KVCDLMSTGGISLDDITYTTLI------DGWHKPLTV 773
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN ++ C+ G A+ + ++ ++ D +TY+T+++ A
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMP-------MEPDSYTYNTLIRGLCGRGRTGNA 175
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L V +DML G P+ +T++ L+ A +QAM L +EM GC P+ N+++
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALG----EDYDGNTDRISNMEHKDKQSI 490
+ + D A +S T+S V G E ++ ++ M K
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP-- 293
Query: 491 TNTPNFVPNSHYSSF--------------DK--RFSFKPTTTTYNILMKACCTDYY--RV 532
PN V + SF D+ ++ P + +YN ++ A C R
Sbjct: 294 ---PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 350
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A + M + G P+ +S+ L+ A G V+ A+++L +++ G +P +++Y T I
Sbjct: 351 MAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 410
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + K+A L EM +QP+++TY T+ R + E + QDM
Sbjct: 411 LTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDM 465
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 63/391 (16%)
Query: 245 DASKKHLS----SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++ P+ Y T+I G+CG A + +D+ + ++ + L+
Sbjct: 141 DAARRLVADMPMEPDSYTYNTLIR--GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198
Query: 299 NVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
K +++ M+ G D+ +YN+++ C G A E +K L +
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF---LKSLPSH 255
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + + +Y+ ++K A+ W+ A K+ +M G PN +T++ LI+ GLVE
Sbjct: 256 GC-EPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEP 314
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
AM + +++ + GC PNS N +L A + + DRA F +S+
Sbjct: 315 AMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSR------------- 360
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
P +YN L+ A C +
Sbjct: 361 ---------------------------------GCYPDIVSYNTLLTALCRGGEVDAAVE 387
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+++++ G +P IS+ +ID +G + AL++L M G+ PD++ Y+T
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R R+++A F +++ I+PN V Y +L
Sbjct: 448 REDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 28/265 (10%)
Query: 382 ALKVKEDMLSAGVTPNTITW--SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL++ E M +G+ P+ ++LI +G +A + A CEP+ N +
Sbjct: 78 ALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPDVMAYNAM 130
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ Q D A RL + + Y NT I + + + N
Sbjct: 131 VAGYCVTGQLDAARRLVADMPMEP------DSYTYNT-LIRGLCGRGRTG---------N 174
Query: 500 SHYSSFDK-RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
+ D R P TY IL++A C + Y + L++EMR G +P+ I++ ++++
Sbjct: 175 ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G V+ A++ LK + G P+ V+Y +K ++R + A L EM P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294
Query: 617 NLVTYITLLRARSRYGSLHEVQQCL 641
N+VT+ L+ R G + + L
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVL 319
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 226 NFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDL 282
N + F +R LV A+ D K+ +PN I+ C RA+ E +
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH--AFCKQKKMDRAMAFVELM 357
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +I +N+L+ ++ +E+ ++ G + SYN ++ AG T
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-----------VFADAKWWQMAL------ 383
A E+ E + KG L+ D+ TYSTI + A K M +
Sbjct: 418 KEALELLNE---MVTKG-LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473
Query: 384 ---------KVKED---------MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
K +E M+S G PN T++ LI GLV++A L E+
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELC 533
Query: 426 QAG 428
G
Sbjct: 534 SRG 536
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 185/484 (38%), Gaps = 95/484 (19%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ R ++ C G + + I + ++ N +FNSL++ + D + ++
Sbjct: 312 PNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKL 371
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTV------LAQEIYGEVKHLE----------- 354
+K M K G YNI + + C L ++ Y E+ L
Sbjct: 372 FKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431
Query: 355 ---------------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
KG + D TYS ++ DA + A + E+M G
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDS-TYSKVIGFLCDASKVEKAFSLFEEMKRNG 490
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++ LI++ AGL++QA F+EML GC PN L+ A ++A Q A
Sbjct: 491 IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVAD 550
Query: 454 RLFRSWTL--------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
LF L + T + G G ++ + + + I ++ Y
Sbjct: 551 ELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESS----DMDKYFKL 606
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSG 562
D P TY L+ C RVK L++ M G PN I + +ID G
Sbjct: 607 DHNNCEGPNVITYGALVDGLCKA-NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL----------------------- 599
++ A ++ M E G SP++ Y++ I + RL
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725
Query: 600 ------------KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+A+ L +M+ PN+VTY ++ +G +++QCL +++DM
Sbjct: 726 EMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG---FGKSGKIEQCLELFRDM 782
Query: 648 WKAG 651
G
Sbjct: 783 CSKG 786
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 61/379 (16%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
+A ++ +++ M++ G++ + +Y IL+ + C AG A++ + E+ H KG
Sbjct: 472 DASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH---KGCTP 528
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ + AK +A ++ E ML G PN +T+++LI+ AG +E+A +
Sbjct: 529 -NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQI 587
Query: 421 FEEML---------------QAGCE-PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+ M CE PN L+ +A + A L T
Sbjct: 588 YARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELL------DT 641
Query: 465 QVALGED-----YDGNTDRISNM-EHKDKQSI---TNTPNFVPNSH-YSSF------DKR 508
+A G + YD D + + +D Q + + + PN + YSSF D R
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 509 F-------------SFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISW 551
S P Y ++ C TD LM +M G +PN +++
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD--EAYKLMLKMEEKGCNPNVVTY 759
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T +ID G SG +E L++ + M G +P+ + Y I C + L +A+ L +EMK
Sbjct: 760 TAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819
Query: 612 YQIQPNLVTYITLLRARSR 630
+++++ ++ S+
Sbjct: 820 TYWPKHILSHRKIIEGFSQ 838
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M G + D ++Y+ ++ C A A ++ E+K G++ V+TY+ ++ F
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR---NGIVP-SVYTYTILIDSFC 506
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-- 432
A Q A K ++ML G TPN +T+++LI+A A + A LFE ML GC+PN
Sbjct: 507 KAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV 566
Query: 433 ---------------SQCCNIL--LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG- 474
+ C I ++ +E+ D+ F+L + + G DG
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 475 -NTDRISNMEHKDKQSITNT-------PNFV-----------------PNSHYSSFDKRF 509
+R+ K+ + +T PN + ++ +R
Sbjct: 627 CKANRV-----KEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER- 680
Query: 510 SFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P TY+ + D V ++++M +PN + +T ++D G + A
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++ M E G +P+VV YT I +S +++Q LF +M PN +TY L+
Sbjct: 741 YKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINH 800
Query: 628 RSRYGSLHEVQQCL-AVYQDMW 648
G L E + L + Q W
Sbjct: 801 CCSNGLLDEAYKLLDEMKQTYW 822
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 164/414 (39%), Gaps = 84/414 (20%)
Query: 293 VFNSLM-----NVNAHD---LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VF+ L+ NVNA D LKF +E+ + +L N L++ CC G +A
Sbjct: 141 VFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRL----LNFLVRKCCRNGWWNMAL 196
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG----------- 393
E G +K K TY+ +++VF A A VK +MLS
Sbjct: 197 EELGRLKDFGYKPSQT----TYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCF 252
Query: 394 ----------------------VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
P+T+ ++ +++ A L E+AM + M + C P
Sbjct: 253 AYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N ILL C+ Q R R+ + + E N + +++ H
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRIL--------SMMITEGCYPNREIFNSLIHA------ 358
Query: 492 NTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTDYYR--------VKALMN 537
+ + YS K F +P YNI + + C++ + V+ +
Sbjct: 359 ----YCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM +G+ N ++ + G+G + A +I+ M G PD Y+ I +
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++++AFSLFEEMK I P++ TY L+ + + G +QQ + +M G
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL---IQQARKWFDEMLHKG 525
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
D H PN + +ID G C G ++ ++ + + + N+Y ++S ++
Sbjct: 640 DTMLAHGCEPNQIVYDAVID--GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697
Query: 303 HD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
D L L+V M + ++ Y ++ C G T E Y + +E KG
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT---DEAYKLMLKMEEKGC-N 753
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ F + + L++ DM S G PN IT+ LIN C + GL+++A L
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 421 FEEMLQA 427
+EM Q
Sbjct: 814 LDEMKQT 820
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 187/425 (44%), Gaps = 38/425 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEV 311
P++ T+I++ G ++ I + +++ +++ + SL+ + +L V
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 297
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G + +Y+ L+ C G A ++ E+ KG+ + V+TY+ +
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE---KGI-EPTVYTYTLPIT 353
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A+++ M G PN T+++LI+ + G +E A+ L+ +ML+ G P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQ--------VALGEDYDGNTDR 478
N+ N L+ +F A ++F W +L+ TQ + LG D +
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFH-WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT 527
M T N + N + + + K +P TYN L+ +
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-S 531
Query: 528 DYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++++ EM GL+PN +S+T LID G V+ AL +L+ M E G +P+V
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y I + R +A + ++M + PN++TY TL+ R G Q ++
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG---RTQFAFKIF 648
Query: 645 QDMWK 649
DM K
Sbjct: 649 HDMEK 653
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 143/350 (40%), Gaps = 33/350 (9%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ + +Y M K G++ + +YN L+ C+ G A +I+ +E G L +
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF---HWMEGHGSLA-NTQ 451
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ I+K + A+ + E ML G P +T+++LIN G V A L + M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
+ GCEP+ N L+ + + + A F+ +S T + G DG
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 477 D----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYN 519
D + ME + N V N S + RFS P TY
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVING--LSKENRFSEAEKICDKMAEQGLLPNVITYT 629
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + A + ++M PN +++ LI G + A +LK M
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G++PD V +T+ I V R+ AF L M +PN TY LL+
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 169/387 (43%), Gaps = 33/387 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--E 310
+PN T+ID G + ++ E + N+ +N+++N + + +F+ +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M + G++ ++ +Y L+ C G T A +I+ + +E + L +++TYS+++
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD---MEKRKCLP-NLYTYSSLI 667
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + ++M G+ P+ +T++SLI+ G ++ A L M+ GC+
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN + ++LL+ + C + L E + + + +K
Sbjct: 728 PNYRTYSVLLKGLQKEC------------------LLLEEKVAVQHEAVYSFSPHEKDV- 768
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN- 547
NF S+ + +PT TY+ L+ C +Y + L+ +M+ G P+
Sbjct: 769 ----NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 824
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I +++LI C V+ AL+I + G + Y I ++ ++++A +LF+
Sbjct: 825 EIYYSLLIAHCKNL-EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSL 634
M + + + + L+ + G L
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEGEL 910
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 175/435 (40%), Gaps = 34/435 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K ++ +A R D K++ P+ + ++ G + +++
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N + +L++ ++ D K L + + M+++G ++ SYN ++
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I + +G+L +V TY+T++ Q A K+ DM PN
Sbjct: 606 FSEAEKI---CDKMAEQGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+SSLI G ++A L +EM + G P+ L+ V + D AF L R
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V +Y + + ++ K+ + + + +SF P N
Sbjct: 722 V----DVGCKPNYRTYSVLLKGLQ---KECL-----LLEEKVAVQHEAVYSFSPHEKDVN 769
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ V L+ M +G P +++ L+ G A Q++K M+E G
Sbjct: 770 ---------FEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD Y + + ++ + A +F ++ Q +L Y L+ A + G + E Q
Sbjct: 821 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ- 879
Query: 640 CLAVYQDM----WKA 650
A++ +M W A
Sbjct: 880 --ALFDNMLEKEWNA 892
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ L +M G+ P+ +++ LI+ G V A IL + + +SPDV YT+ I
Sbjct: 225 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R++ L AF +F+ M PN VTY TL+ G V + L + ++M + G
Sbjct: 285 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG---RVDEALDMLEEMIEKG 340
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 136/362 (37%), Gaps = 44/362 (12%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
+PN+ +I+ + ++ I + + Q + N+ + +L++ + +F +
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M+K + ++ +Y+ L+ C G A E +K +E KG L D T+++++
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGK---ADEAEILLKEMERKG-LAPDEVTFTSLI 702
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV---------------- 414
F A + M+ G PN T+S L+ L+
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762
Query: 415 --------EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
E +L M + GCEP + L+ +F A +L +
Sbjct: 763 PHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y N+E I + S + + F+ + Y L+ A C
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKI-----------FHSIEAK-GFQLHLSIYRALICALC 870
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+AL + M + + I WT+L+D G ++ +++L IM +P++
Sbjct: 871 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQ 930
Query: 585 AY 586
Y
Sbjct: 931 TY 932
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F P +++KAC + RV +NE+ +G + S L+ VEGA
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M G+ P ++ + T I + + ++++A + ++ Y + P++ TY +L+
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R +L V+ M K G
Sbjct: 286 CRNRNL---DLAFGVFDRMVKEG 305
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 219/537 (40%), Gaps = 87/537 (16%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 24 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 82
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADIL--------------FCNFVREFGKKRDLV 238
I LC ++ + A+IL FC + + ++ ++
Sbjct: 83 YNVLIHGLC----------KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG 132
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL D +K P+ +I+ C D + + E + + N+ V+++L+
Sbjct: 133 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 192
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + ++ + M GV D+ YN ++ AG +E + ++ +
Sbjct: 193 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGR 249
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LK D T+ + ++ A K ++ML G+ PN ++ LIN AG + +
Sbjct: 250 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ Q C+ + ++ + A ++F
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS------------------- 349
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
E K+K + P TY+ L+ C KA
Sbjct: 350 ------ELKEKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFE 381
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM G++PN + L+D SG+++ A ++ M E G+ PD V Y+T I
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S+ + +AFSLF EM +QP+ Y L+ + G ++++ + ++++M + G
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKG 495
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 162/388 (41%), Gaps = 73/388 (18%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++++ LGV+ D+ +
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 445 NVAEAFSLFHEMPSKGVQ------------------------------------------ 462
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 463 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 516
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA-----------------FSLFEE 608
A Q+ + M + PD V YTT I ++ ++++A F+LFE+
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
M ++P+ VTY ++ A + +L E
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVE 604
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 190/426 (44%), Gaps = 68/426 (15%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 381
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E M S GV
Sbjct: 442 KSENVAEAFSLFHE---------------------------------------MPSKGVQ 462
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P++ +++L++ C G +E+AM+LF EMLQ G + N L+ ++C+ A +L
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQL 521
Query: 456 FRSWT--------LSKTQVALGEDYDGNTDRI--SNMEHKDKQSITNTPNFVPNSHYSSF 505
F+ ++ T V D+ ++ +N+ K+ Q N + ++ ++ F
Sbjct: 522 FQEMIAKQIMPDHVTYTTVI---DWHCKAGKMEEANLLFKEMQE----RNLIVDTVFALF 574
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
+K + KP TY +++ A C + V+A L +E+ G+ +LI A
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M E G+ P + A +T ++ + ++ +A +FE +K + P+ T
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694
Query: 622 ITLLRA 627
I L+
Sbjct: 695 IDLVNG 700
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 53/327 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G++ + +Y I+ C A A+ + E++ K LK D S ++ F
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDGFM 56
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
L++K+ M+S G+ N IT++ LI+ G +E+A + + M+ GC+PNS+
Sbjct: 57 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+L++ RA L + ME +
Sbjct: 117 TFCLLIEGYCREHNMGRALEL-----------------------LDEMEKR--------- 144
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
N VP++ +Y ++ C D L+ +M GL PN + ++
Sbjct: 145 NLVPSA---------------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI G +E A ++L M G++PD+ Y I ++ ++++A + E++
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQ 639
++P+ VT+ + S+ G + E +
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAK 276
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 170/390 (43%), Gaps = 43/390 (11%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+++ + ++ N L++ V L+ + + ++ M + GV D S+ +++
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN-------MFVEMCQRGVSPDCVSFKLMVV 232
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
ACC G + A+ + + +G + +D T + I+ F + + M+
Sbjct: 233 ACCNMGRVLEAERW---LNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ PN I +++LIN G ++QA L EEM++ G +PN L+ + ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348
Query: 453 FRLFRSWTLS-------KTQVALGEDY--DGNTDR----ISNMEHKDKQSITNT------ 493
FRLF S T A+ Y + +R +S M+ + TNT
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408
Query: 494 -----PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVG 543
NFV + F P TYN ++ C + YR L+N++ G
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR---LLNKVSVHG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + +++TIL+ + +L M + G +PD+ +YTT I R K++K++
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
LFEE + P TY +++ RYG+
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 152/372 (40%), Gaps = 23/372 (6%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
C IID G + + + + N+ F +L+N +K E+ + M
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ G ++ ++ L+ C G T A ++ +K + + G K +V TY+ ++ +
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGY-KPNVHTYTAMINGYCKE 378
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A + M G+ PNT T+++LI+ G +A L + M + G PN
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N ++ + D A+RL L+K V G DG T I H + + F
Sbjct: 439 NAIIDGLCKKGSLDEAYRL-----LNKVSVH-GLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 497 VPNSHYSSFDK--RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
F+K + F P +Y L+ C + L E ++GL P ++T
Sbjct: 493 --------FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+I GN A+++ + M G +PD + Y I + +L A +L++ M
Sbjct: 545 SMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604
Query: 613 QIQPNLVTYITL 624
+ P VT +TL
Sbjct: 605 GLSPCEVTRLTL 616
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 26/299 (8%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V FA+ + A+ + +M + G+ P+T T + +++ GLVE A ++F EM Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGED---YDGNTDRIS 480
P+ +++ AC + A R R + + L D G +R+
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 481 NMEHK--DKQSITNTPNFVP--------NSHYSSFD-----KRFSFKPTTTTYNILMKAC 525
K + N NF S +F+ R +KP T+ L+
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 526 CTDYYRVKAL---MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + KA + +R+ G PN ++T +I+ + A +L M+E G+ P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YTT I + +A+ L + M PN+ TY ++ + GSL E + L
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-EVY 312
PN T+ID G+++++ + + + + + NIY +N++ ++ K +L E Y
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI--IDGLCKKGSLDEAY 455
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + K+ G+ AD +Y IL+ C +T + + ++ K D+ +Y+T+
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM----LKVGFTPDIHSYTTL 511
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F K + + ++ E+ +S G+ P T++S+I G A+ LF+ M GC
Sbjct: 512 ISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+S L+ + + D A L+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLY 598
>gi|224080562|ref|XP_002306163.1| predicted protein [Populus trichocarpa]
gi|222849127|gb|EEE86674.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 16/306 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + N+ A E+ K + LK D Y+T++ A +
Sbjct: 42 LSTFNMLMSVCATSQNSAGAFEVLQLAKAVG----LKADCKLYTTLISTCAKSGKVDAMF 97
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V +M++AGV PN T+ +LI+ CA AG V +A + M +P+ N L+ AC
Sbjct: 98 EVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 157
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + T GE + D I+ ++ TN
Sbjct: 158 GQSGAVDRAFDVLAEMT--------GEAQPIDPDHIT--VGALIKACTNAGQVDRAQEVY 207
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+ +++ K T Y I + +C D+ + ++M G+ P+ + + LID G +
Sbjct: 208 NMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHA 267
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ A +I++ + G ++ Y++ + C +K ++ L+E++K +I+P + T
Sbjct: 268 GKMDAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATM 327
Query: 622 ITLLRA 627
L+ A
Sbjct: 328 NALITA 333
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 143/348 (41%), Gaps = 57/348 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 110 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDV 169
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + L+KAC AG AQE+Y V KG ++ Y+
Sbjct: 170 LAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEV----YTIA 225
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A KV +DM GV P+ + S+LI+ +AG ++ A + +E G
Sbjct: 226 INSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGA 285
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + + L+ ED
Sbjct: 286 QLGIIPYSSLMGACCNAKNWQKGLELY-------------EDI----------------- 315
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
K KPT T N L+ A C KAL ++EM+ GL PN
Sbjct: 316 -----------------KSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPN 358
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I+++IL A ++E L +L ++D ++P ++ I +C+R
Sbjct: 359 TITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLR 406
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT +T+N+LM C T A ++ + VGL + +T LI C SG V+ ++
Sbjct: 40 PTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEV 99
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V + L+ A +
Sbjct: 100 FHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 159
Query: 631 YGSLHEVQQCLA 642
G++ LA
Sbjct: 160 SGAVDRAFDVLA 171
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 51/274 (18%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T++ ++ V A ++ A +V + + G+ + +++LI+ CA +G V+ +F EM
Sbjct: 44 TFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEM 103
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ AG EPN L+ C A Q +AF +
Sbjct: 104 VNAGVEPNVHTYGALIDGCARAGQVAKAFGAY---------------------------- 135
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEM--R 540
I + N KP +N L+ AC R ++ EM
Sbjct: 136 ----GIMRSKNV---------------KPDRVVFNALITACGQSGAVDRAFDVLAEMTGE 176
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ P+HI+ LI AC +G V+ A ++ ++ + + YT AI C + +
Sbjct: 177 AQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWE 236
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A +F++M + P+ + L+ G +
Sbjct: 237 FACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKM 270
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S N GA ++L++ + G+ D YTT I C +S ++ F
Sbjct: 39 NPTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFE 98
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM + ++PN+ TY L+ +R G +V + Y M
Sbjct: 99 VFHEMVNAGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIM 138
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 166/387 (42%), Gaps = 56/387 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVY 312
+Y II G G ++ I+ ++ + N+ +N++++ + K LE++
Sbjct: 112 VYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G+ D ++N LL C G A+ + E+ + +G+ + D+FTY+T++
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVN---RGIDQ-DIFTYNTLLDA 227
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
MA ++ +M + + PN +T+S++I+ A AG ++ A +LF EM G +
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLD 287
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL + +F+ A + R ME+
Sbjct: 288 RVSYNTLLSIYAKLGRFEEAMDVCRE-----------------------MENS------- 317
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHIS 550
+ TYN L+ Y V+ + EM+ +SPN ++
Sbjct: 318 -----------------GIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G A+ + + ++ G+ DVV Y+ I ++ ++ A SL +EM
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEV 637
I+PN+VTY +++ A R + V
Sbjct: 421 KEGIRPNVVTYNSIIDAFGRPATTESV 447
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 36/301 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
V+ +S I+ + + + A+K+ M G+ PN +T++++I+AC G+ ++ + +F
Sbjct: 112 VYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDR 478
+EML+ G +P+ N LL C + ++ A RS + + +D Y+ D
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAA----RSLSCEMVNRGIDQDIFTYNTLLDA 227
Query: 479 ISNMEHKDK--QSITNTP--NFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYY 530
+ D + ++ P N +PN TY+ ++ KA D
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPN---------------VVTYSTMIDGYAKAGRLDDA 272
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R L NEM+ +G+S + +S+ L+ G E A+ + + M G+ DVV Y +
Sbjct: 273 R--NLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 330
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ + +FEEMK + PNL+TY TL+ S+ G L+ ++ + V+++ KA
Sbjct: 331 GGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSK-GGLY--REAMDVFREFKKA 387
Query: 651 G 651
G
Sbjct: 388 G 388
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 166/432 (38%), Gaps = 82/432 (18%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L +D ++ P+ +++ VC G + +R++ ++ ++ + +I+ +N+L++
Sbjct: 168 LEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDA 227
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
L E+ M ++ ++ +Y+ ++ AG A+ ++ E+K L
Sbjct: 228 VCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG---- 283
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD +Y+T++ ++A ++ A+ V +M ++G+ + +T+++L+ +
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+FEEM PN + L+ + + A +FR +
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF------------------- 384
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
K+ K Y+ L+ A C + A L+
Sbjct: 385 ----------------------------KKAGLKADVVLYSALIDALCKNGLVESAVSLL 416
Query: 537 NEMRTVGLSPNHISWTILIDACG-----------------------GSGNVEGALQILKI 573
+EM G+ PN +++ +IDA G S VE A + L
Sbjct: 417 DEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVA 476
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQA----FSLFEEMKHYQIQPNLVTYITLLRARS 629
RED + A K Q +F +M +I+PN+VT+ +L A S
Sbjct: 477 DREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACS 536
Query: 630 RYGSLHEVQQCL 641
R S E L
Sbjct: 537 RCNSFEEASMLL 548
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ +I G G VE A + K +G V A++ I RS +A +F MK
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y ++PNLVTY ++ A + G E ++ L ++ +M + G
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGV--EFKRVLEIFDEMLRNG 178
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ N + +GK+ + ++ K SPN+ T+IDV G Y ++
Sbjct: 320 RKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + + ++ ++++L++ + ++ + + M K G+ ++ +YN ++ A
Sbjct: 380 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 439
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST----------IVKVF---ADAKWWQMA 382
T + G+ L+ + V + I+K+F A K Q
Sbjct: 440 RPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAK 499
Query: 383 ----------LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
L V M + PN +T+S+++NAC+ E+A L EE+
Sbjct: 500 NSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEEL 551
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M++ G + +YN+L+ C +G +E +G K +E G++ D FTY +
Sbjct: 243 KVLVEMRERGCGLNTVTYNVLIAGLCRSGAV---EEAFGFKKDMEDYGLVP-DGFTYGAL 298
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ A + ++M A + PN + +++LI+ G ++A + +EM+ AG
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN + L++ + Q DRA L + M +
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLK-----------------------QMVRDSHRP 395
Query: 490 ITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LM 536
T T N + H+ K+ +F+ P TY+I++ C KA L+
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 455
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM T GL PN + LI GNV A +I M + + PD+ Y + I +
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
R++++ F +M+ + PN TY L+ + G L +Q
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/570 (21%), Positives = 232/570 (40%), Gaps = 104/570 (18%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLL---------KNECQRLLDS---GEVE 172
R G ++ G K + + G+ P DG + L NE + LLD E++
Sbjct: 269 RSGAVEEAFGFKKDMEDYGLVP----DGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 324
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCV------NKPDVNLAIRYACIV---PRADIL 223
V + L + + DE F++++ V NK + +R C + RA +L
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLS----------------SPNMYICRTIIDVCG 267
VR+ + D ++ + +H S SPN+Y +I G
Sbjct: 385 LKQMVRD-SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH--G 441
Query: 268 IC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMAD 323
+C G+ K+ + E++ ++ + N +V+ L++ + +L E++ M K+ V+ D
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ YN L+ G + + + + ++ +G+L + FTYS ++ + + A
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQ---MQERGLLP-NEFTYSGLIHGYLKNGDLESAE 557
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML G+ PN + + L+ + + +E+ F+ ML G +++ IL+
Sbjct: 558 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 617
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + AFR+ G + +G+ VP+ H
Sbjct: 618 SSSGNMEAAFRVLS-----------GIEKNGS---------------------VPDVH-- 643
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
Y+ L+ C R KA +++EM G+ PN + + LID S
Sbjct: 644 -------------VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A + + G+ P+ V YT+ I + + AF L+ EM I P+ Y
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L S G L +Q + + ++M+ G
Sbjct: 751 SVLTTGCSSAGDL---EQAMFLIEEMFLRG 777
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 27/307 (8%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ + ++ + + + A KV +M G NT+T++ LI +G VE+A ++M
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTD 477
G P+ L+ ++ + + A L + ++ + + G +GN D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 478 RISNMEHKDKQSITNTPNFVPNSHY-------SSFDK---------RFSFKPTTTTYNIL 521
M K+ + PN + + D+ R S +P T TYN++
Sbjct: 345 EAFKMI-KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ + + A L++EM G+SPN +++I+I SG E A +L+ M G+
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
P+ Y I R + A +F++M + P+L Y +L+ S+ G + E +
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523
Query: 640 CLAVYQD 646
A Q+
Sbjct: 524 YFAQMQE 530
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 142/352 (40%), Gaps = 37/352 (10%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++V++SL++ D + + M K GV ++ YN L+ C +G+ A+ ++
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ AKG++ + TY++++ A + +ML+ G+TP+ +S L
Sbjct: 701 NSIL---AKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C++AG +EQAM L EEM G S N++ C + TL V
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQE---------TLKLLHVI 807
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G N I N+ S + T + L +
Sbjct: 808 MGRGLVPNALTIENI-------------------ISGLSEAGKLSEVHTIFVELQQKTSE 848
Query: 528 DYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
R +L +M G P + ++ D C GN++ AL + ++ +Y
Sbjct: 849 SAARHFSSLFMDMINQGKIPLDVVDDMIRDHC-KEGNLDKALMLRDVIVAKSAPMGCSSY 907
Query: 587 TTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ R +L +A +L +EM K +QP LV + + R + L++V
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNKV 959
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 198/472 (41%), Gaps = 71/472 (15%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG +D ALR + + +PN T++D GD+ ++ +++D+ ++ + +
Sbjct: 290 FGDYKD---ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKS 346
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
IY FN+++N ++ E +K M++LG D +Y L C GN +E +
Sbjct: 347 IYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNV---EEAFK 403
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E + + S IV +F K ++ + + +M + G++PN +T+ +LI
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKL-IDLLAEMDTRGLSPNVVTYGALIAGW 462
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCC----------------NILLQA---------- 442
+ G +++A + EM+ G PN C N+LLQ
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDH 522
Query: 443 -CVEACQFDRAFRLFRSWTLSKT--QVALGEDYDGNTDRISNMEHKDKQSITNTPN--FV 497
C+E Q + R W ++ T + A+ N M K N F+
Sbjct: 523 RCLEDFQ-NADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFL 581
Query: 498 PNSHYSSFDKRFSF----------------------------KPTTTTYNILMKACCTDY 529
SH S F++ P TTYN L+ C
Sbjct: 582 GLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSG 641
Query: 530 Y--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y R + L +++ GL PN +++ ILID SG+ AL + M ++G+SP ++ Y+
Sbjct: 642 YLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYS 701
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ I + +++A L EMK + + T+ L+ ++G + ++ +
Sbjct: 702 SLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 184/461 (39%), Gaps = 63/461 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ + SA+ YD ++ P+++ C +++ G ++ ++ LN
Sbjct: 43 KRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAV 102
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL++ V+ D++ V K M + GVM + + +L+K C A+++ +
Sbjct: 103 SYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKV---L 159
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CA 409
+ +E + + +D + Y ++ + A++V+++ML G+ N +SLIN C
Sbjct: 160 REMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCK 219
Query: 410 NA----------------------------------GLVEQAMHLFEEMLQAGCEPNSQC 435
N GL +A ++ ++ML+ G EP
Sbjct: 220 NGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVT 279
Query: 436 CNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL+ + A RL+ ++ +V DG ++ + +++T
Sbjct: 280 YNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG-LFKMGDFS----RALTL 334
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ + + +N ++ C + K M +G P+ I+
Sbjct: 335 WDDILAR----------GINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L D GNVE A +I + M ++ + P + Y + I SK++ + L EM
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN+VTY L+ G L + + Y +M G
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRL---DKAFSAYFEMIGKG 482
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 31/356 (8%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVM 321
G GD ++ R +++ + +N++V NSL+N H+ + L M+KL +
Sbjct: 186 GKMGDAIRVR---DEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC---MRKLDLK 239
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D SY L+ C G L+ + + + KG+ + V TY+T++K ++
Sbjct: 240 PDSYSYCTLVDGYCRDG---LSSKAFNVCDQMLRKGI-EPTVVTYNTLLKGLCRFGDYKD 295
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL++ ML GVTPN + + +L++ G +A+ L++++L G + N ++
Sbjct: 296 ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMIN 355
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNS 500
+ + D A F K LG DG T R +S+ K + N
Sbjct: 356 GLCKMGEMDGAKETF------KRMEELGCKPDGITYRTLSDGYCK----VGNVEEAFKIK 405
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
++ F P+ YN L+ T ++ L+ EM T GLSPN +++ LI
Sbjct: 406 EKMEKEEIF---PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGW 462
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G ++ A M G +P+V+ + + R R+ +A L ++M + +
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDL 518
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV 171
S+EM S IV +I ++ +L +++ G++P + G+ L+ C D G +
Sbjct: 416 SIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGA---LIAGWC----DQGRL 468
Query: 172 E-MFVGLMEVLEEFRLP--------------VKELDEEFRIVQLCVNKPDVNLAIRYACI 216
+ F E++ + P + +DE ++Q V D +L + + C+
Sbjct: 469 DKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV---DFDLVLDHRCL 525
Query: 217 --VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDY 272
ADI +K D D S S PN + I + G+C G
Sbjct: 526 EDFQNADI----------RKLDCWKIADTLDESAIKFSLPNNVVYN--IAMAGLCKSGKV 573
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+R + L + T + + + +L++ A + + M G++ ++ +YN L
Sbjct: 574 NDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNAL 633
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L C +G A+ ++ ++ HL KG++ +V TY+ ++ + + + AL ++ ML
Sbjct: 634 LNGLCKSGYLDRARRLFDKL-HL--KGLIP-NVVTYNILIDGYCKSGSPREALDLRGKML 689
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
G++P+ IT+SSLIN VE+AM L EM + + + L++ C++
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ 744
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P+ + T+I G ++ + +++ ++ + NI +N+L+N + L
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ + G++ ++ +YNIL+ C +G+ A ++ G++ K + + TYS+++
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM----LKEGISPSIITYSSLI 704
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + A+K+ +M ++ V T+S L+ C G V++ M M+ C
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKK-MSKLHNMMHMAC- 762
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
P++ I +E + A + S+T+S+
Sbjct: 763 PSA---GITSHKQMELSELSNAKEMLDSYTISEA 793
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 36/318 (11%)
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ SY+ + C G A EI+ + +E KG D FTY+ ++ +M
Sbjct: 89 TDVISYSRKINGLCKKGQIAEAMEIF---REMEEKGSAP-DSFTYNILINGLCKDAQLEM 144
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ + ++M + G +P +T+++LI+ AG V+ AM + +EM G PN+ L+Q
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204
Query: 442 ACVEACQFDRAFRLFRSWTL----------SKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + +RA + + L + TQ+ G G + ME D+ I+
Sbjct: 205 GLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEM--GMEFLDEMIIS 262
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
P TY L+ C + L+NEM +G + +
Sbjct: 263 GC------------------FPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LID G ++ A ++ +M E G++PDV YT+ I+ + L +A L +EM
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Query: 610 KHYQIQPNLVTYITLLRA 627
+ I PN VTY TL+
Sbjct: 365 RAKGIVPNSVTYTTLING 382
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 166/405 (40%), Gaps = 65/405 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++R + S+LR Y K L+S + + + G+C G ++ I+ ++ + +
Sbjct: 68 RRRGIPSSLRIY--RPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPD 125
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N L+N D L+ + + MQ G + +Y L+ C AG A +I
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPNTITWSSLIN 406
E++H +G+ + TY+ +++ D + A+ V ++M G PN +T++ LI+
Sbjct: 186 EMEH---RGITP-NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
GL E M +EM+ +GC PN+ L+ + F + L V
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSF------LEAAVLLNEMV 295
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
A+G + D YN L+ C
Sbjct: 296 AIGCELD-----------------------------------------VVIYNSLIDGLC 314
Query: 527 T----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
D+ R ++ M G++P+ ++T LI +G ++ AL +++ MR G+ P+
Sbjct: 315 KMGELDFAREMQIL--MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPN 372
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YTT I ++ R A L EMK + P Y L ++
Sbjct: 373 SVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKS 417
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 53/245 (21%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ I++S IN G + +AM +F EM + G P+S NIL+ + Q + L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL- 148
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ M+ + F PT
Sbjct: 149 ----------------------MDEMQAR------------------------GFSPTVV 162
Query: 517 TYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+ CT RV A M+ EM G++PN +++T LI G VE A+ +LK
Sbjct: 163 TYTTLIHGFCT-AGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKE 221
Query: 574 MREDGMS--PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ G P+VV YT I + + +EM PN TY L+ +
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281
Query: 632 GSLHE 636
GS E
Sbjct: 282 GSFLE 286
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 8/238 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F + +A+ D + +PN +I CG+ ++ + ++
Sbjct: 162 VTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKE 221
Query: 282 --LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
LR N+ + L++ + +E M G + A+Y L+ C
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ + A + E+ + + LDV Y++++ A +++ M+ GV P+
Sbjct: 282 GSFLEAAVLLNEMVAIGCE----LDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T++SLI +AGL+++A+ L +EM G PNS L+ +A + D A +L
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQL 395
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM G +P+ ++ ILI+ +E + ++ M+ G SP VV YTT I
Sbjct: 113 IFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFC 172
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R+ A + +EM+H I PN VTY L++ G EV++ + V ++M G
Sbjct: 173 TAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG---EVERAILVLKEMKLRG 226
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 43/390 (11%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+++ + ++ N L++ V L+ + + ++ M + GV D S+ +++
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAEN-------MFVEMCQRGVSPDCVSFKLMVV 232
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
ACC G + A++ + + +G + +D T + I+ F + + M+
Sbjct: 233 ACCNMGRVLEAEKW---LNAMVERGFI-VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ PN I +++LIN G ++QA L EEM++ G +PN L+ + ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348
Query: 453 FRLFRSWTLS-------KTQVALGEDY--DGNTDR----ISNMEHKDKQSITNT------ 493
FRLF S T A+ Y + +R +S M+ + TNT
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408
Query: 494 -----PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVG 543
NFV + F P TYN ++ C + YR L+N++ G
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR---LLNKVSVHG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + +++TIL+ + +L M + G +PD+ +YTT I R K++K++
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
LFEE + P TY +++ RYG+
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 152/370 (41%), Gaps = 19/370 (5%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
C IID G + + + + N+ F +L+N +K E+ + M
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
+ G ++ ++ L+ C G T A ++ +K + + G K +V TY+ ++ +
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGY-KPNVHTYTAMINGYCKE 378
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A + M G+ PNT T+++LI+ G +A L + M + G PN
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N ++ + D A+RL L+K V G DG T I H +Q+ TN
Sbjct: 439 NAIIDGLCKKGSLDEAYRL-----LNKVSVH-GLQADGVTYTILMSVHC-RQADTNRSLV 491
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
N + F P +Y L+ C + L E ++GL P ++T +
Sbjct: 492 FFNKML-----KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I GN A+++ + M G +PD + Y I + +L A +L++ M +
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Query: 615 QPNLVTYITL 624
P VT +TL
Sbjct: 607 SPCEVTRLTL 616
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M GV+P+ +++ ++ AC N G V +A M++ G ++ C +++ A +
Sbjct: 214 EMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKG 273
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSF 505
+R F W + ++ L + T I+ + + KQ+ V
Sbjct: 274 YVNRVVGYF--WKM--VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV-------- 321
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKAL---MNEMRTVGLSPNHISWTILIDACGGSG 562
R +KP T+ L+ C + KA + +R+ G PN ++T +I+
Sbjct: 322 --RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A +L M+E G+ P+ YTT I + +A+ L + M PN+ TY
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439
Query: 623 TLLRARSRYGSLHEVQQCL 641
++ + GSL E + L
Sbjct: 440 AIIDGLCKKGSLDEAYRLL 458
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-EVY 312
PN T+ID G+++++ + + + + + NIY +N++ ++ K +L E Y
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI--IDGLCKKGSLDEAY 455
Query: 313 KNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + K+ G+ AD +Y IL+ C +T + + ++ K D+ +Y+T+
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM----LKVGFTPDIHSYTTL 511
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F K + + ++ E+ +S G+ P T++S+I G A+ LF+ M GC
Sbjct: 512 ISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P+S L+ + + D A L+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLY 598
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 218 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 277
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L LDVFTY+ +
Sbjct: 278 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LALDVFTYNIL 333
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T++SLI A + G V++ LF+E ++ G
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 426
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 427 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 466
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 467 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 526
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 527 EMVENGITPDDSTYISLIEG 546
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 173/403 (42%), Gaps = 44/403 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y ++S ++ ++ + L++ F L + +M +L + ++NI+L+ C A
Sbjct: 110 LYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIMLRHLCSA 167
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTP 396
G A E+ ++ A TY+T++ F Q AL + +M G+ P
Sbjct: 168 GKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRL 455
N T+ ++I+ G V++A+ +F+EML G +P + N L+ + + D A L
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-L 278
Query: 456 FRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNFVPNSH- 501
+R + + Y DG + + M K T N + N H
Sbjct: 279 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHC 338
Query: 502 -----------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
+ + +R + T TY L+ A L +E G+ P+
Sbjct: 339 KEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A L +E
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M IQP+LVTY TL+ S G +V+ L + +M G
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKG 497
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 66/356 (18%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLK 306
+P++Y +I G+C G +R ++E + + + N VF L ++AH D +
Sbjct: 183 TPDVYTYGALIQ--GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL--IDAHCKKGDAE 238
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
LE+++ M++ GV D +YN ++ C A + A I E++ L+ D TY
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR----SAGLRPDTVTY 294
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ + + MA+++K++M++ GV + +T+++LI+ + AG A + EM++
Sbjct: 295 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
AG EP++ +++ A RL + M++K
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK-----------------------EMQNKG 391
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ KP TYN++M C L+N M +G+
Sbjct: 392 R------------------------KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 427
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
SP+ I++ IL+D G V I ++ G PD+ YT+ + V+ K K
Sbjct: 428 SPDDITYNILLDGHCKHGKVT---DIEELKSAKGTVPDLGVYTSIVGEIVKKKTTK 480
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 24/369 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L + +FN LM V +L V+ MQ GV + S+N ++
Sbjct: 102 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG+ A+ ++ + + GV DV+TY +++ + A V E M G+
Sbjct: 162 CRAGDLDGAETLH---RRMSEAGVTP-DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 217
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN + ++ LI+A G E + L EM + G P++ N ++ A A
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277
Query: 455 L---FRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ RS L V DG + +M + KQ++ + Y++ S
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 337
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ D RV + EM GL P++ ++T++IDA G+V+ L++
Sbjct: 338 KAGRS-----------ADAERV---LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 383
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
LK M+ G P VV Y + + ++K A L M + + P+ +TY LL +
Sbjct: 384 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 443
Query: 631 YGSLHEVQQ 639
+G + ++++
Sbjct: 444 HGKVTDIEE 452
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 138/342 (40%), Gaps = 56/342 (16%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y + G+ + +N+L++ G AQ ++ E ++++GV + V +++T++
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDE---MQSRGVRRT-VVSFNTMIS 159
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A + M AGVTP+ T+ +LI G +E A +FE+M G +P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ IL+ A + + L R
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREM-------------------------------- 247
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
+ +P TYN ++ C D ++ EMR+ GL P+ +
Sbjct: 248 ---------------RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LID ++ A++I + M +G+ D V YT I ++ R A + EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+ TY ++ A R G +V+ L + ++M G
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKG 391
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDY 472
+A + ++L AG P ++ N+L++ V + A +F +S + +T V+
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACC--T 527
G R +++ + + +R S P TY L++ C
Sbjct: 159 SGMC-RAGDLDGAE-----------------TLHRRMSEAGVTPDVYTYGALIQGLCRVG 200
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +M G+ PN + +TILIDA G+ E L++ + MRE G+ PD V Y
Sbjct: 201 RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYN 260
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R++ LK A + EM+ ++P+ VTY TL+ Y E+ + + Q+M
Sbjct: 261 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG---YCKEEELDMAMEIKQNM 317
Query: 648 WKAG 651
G
Sbjct: 318 VAEG 321
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +ID GD ++ ++R + V + +N+++N A DLK +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G+ D +Y L+ C +A EI +++ A+GV LD TY+ ++
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK---QNMVAEGV-GLDEVTYTALIS 334
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A A +V +M+ AG+ P+ T++ +I+A G V+ + L +EM G +P
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+++ + Q A L + +S + DG+ + + D +
Sbjct: 395 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHC---KHGKVTDIE 451
Query: 489 SITNTPNFVPN-SHYSSFDKRFSFKPTTTTYN 519
+ + VP+ Y+S K TT TY+
Sbjct: 452 ELKSAKGTVPDLGVYTSIVGEIVKKKTTKTYH 483
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 185/404 (45%), Gaps = 34/404 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLE 310
P++Y ++I C G Y ++ +++ + + + +N ++NV
Sbjct: 31 PDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITG 90
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G++ D +YN L+ CC G+ L +E + +++ G + D TY+T++
Sbjct: 91 LFEGMKNAGILPDEYTYNTLI-TCCRRGS--LYEEAAAVFEDMKSMGFVP-DKVTYNTLL 146
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
V+ ++ + A++V +M G +P+ +T++SLI+A A GL+E+AM L +M++ G +
Sbjct: 147 DVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIK 206
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHK 485
+ +L V + + A R+F + + + GN + + M K
Sbjct: 207 LDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEM-MK 265
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVG 543
+ I K P T+N L+ + V + EM+ VG
Sbjct: 266 VFEEI----------------KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVG 309
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P ++ LI A G+ + A+ + K M + G++PD+ Y + R +Q+
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ EM+ +PN +T+ +LL A Y + E+ + LA+ +++
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHA---YANGKEIGRMLALAEEI 410
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 189/419 (45%), Gaps = 48/419 (11%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+ FVR GK SA+R ++ + PN+ +I + G G + + ++E++
Sbjct: 215 MLSGFVRT-GKDE---SAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Query: 283 RSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +I +N+L+ V N D + + V+K M+++G + + +YN L+ A G+
Sbjct: 271 KICCCVPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRVGFVPERDTYNTLISAYSRCGS 329
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +Y K + G+ D+ TY+ ++ A W+ + K+ +M PN +
Sbjct: 330 FDQAMAMY---KRMLDTGITP-DLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNEL 385
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCCNILLQACVEACQ 448
T SL++A AN + + + L EE+ EP NS+C ++LL+A
Sbjct: 386 THCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC-DLLLEA------ 438
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+RAF + S D +T + +Q +T T + +F K
Sbjct: 439 -ERAFLELKRKGFSP---------DLSTLNAMIAIYGRRQMVTKTNEIL------NFMKE 482
Query: 509 FSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P+ TYN LM + ++ R + ++ E+ G+ P+ IS+ +I A +G ++
Sbjct: 483 SGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKE 542
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A I MRE G+ PDV+ Y T + ++A + M + +PN TY +++
Sbjct: 543 ASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVI 601
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 171/390 (43%), Gaps = 55/390 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ Y T+I C Y ++ A++ED++S + +N+L++V + +K +EV
Sbjct: 102 PDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEV 161
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ G + +YN L+ A A + +L + + E+K+ + +KLDVFTY+ ++
Sbjct: 162 LREMEVNGCSPSIVTYNSLISA--YARDGLLEEAM--ELKNQMVERGIKLDVFTYTAMLS 217
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A++V E+M +AG PN T+++LI N G + M +FEE+ C P
Sbjct: 218 GFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVP 277
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N LL G+ +G +S + + K
Sbjct: 278 DIVTWNTLL-------------------------AVFGQ--NGMDSEVSGVFKEMK---- 306
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
R F P TYN L+ A C + + A+ M G++P+
Sbjct: 307 ----------------RVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLS 350
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ++ A G E + +IL M++ P+ + + + + K + + +L EE+
Sbjct: 351 TYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
I+P+ V TL+ S+ L E ++
Sbjct: 411 CSGVIEPHAVLLKTLVLVNSKCDLLLEAER 440
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 30/359 (8%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
N+ K G D+ +Y L+ AC G A ++ K +E +G K + TY+ I+ V+
Sbjct: 23 NLHKDGFEPDVYAYTSLITACVSNGRYREAVMVF---KKMEEEGC-KPTLITYNVILNVY 78
Query: 374 ADAKW-WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
W + E M +AG+ P+ T+++LI C L E+A +FE+M G P+
Sbjct: 79 GKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPD 138
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--DGNTDRISNMEH 484
N LL ++ + A + R ++ T +L Y DG + +++
Sbjct: 139 KVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKN 198
Query: 485 KDKQSITNTPNFVPNSHYSSF---------------DKRFSFKPTTTTYNILMKACCT-- 527
+ + F + S F + KP T+N L+K
Sbjct: 199 QMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRG 258
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + + E++ P+ ++W L+ G +G + K M+ G P+ Y
Sbjct: 259 KFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYN 318
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I R QA ++++ M I P+L TY +L A +R G + ++ LA QD
Sbjct: 319 TLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQD 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 51/261 (19%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ ++SLI AC + G +A+ +F++M + GC+P N++L
Sbjct: 28 GFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILN----------- 76
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+G ++ T M K
Sbjct: 77 -----------VYGKMGMPWNKITGLFEGM------------------------KNAGIL 101
Query: 513 PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN L+ C + Y A+ +M+++G P+ +++ L+D G S ++ A+++
Sbjct: 102 PDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEV 161
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ M +G SP +V Y + I R L++A L +M I+ ++ TY +L R
Sbjct: 162 LREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVR 221
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G + + + V+++M AG
Sbjct: 222 TG---KDESAMRVFEEMRTAG 239
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ C+ + + +++ L + + P+ + +T++ V C +++ +
Sbjct: 384 ELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFL 443
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+L+ + + ++ N+++ + + T E+ M++ G +A+YN L+ +
Sbjct: 444 ELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSE 503
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N ++E+ +K + AKG+ K D+ +Y+T++ + + A + +M +G+ P+
Sbjct: 504 NFERSEEV---LKEILAKGI-KPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDV 559
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++ + + A + E+A+ + M++ GC+PN N ++ + + D A + S
Sbjct: 560 ITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISS 619
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+L+N + G P+ ++T LI AC +G A+ + K M E+G P ++ Y + V
Sbjct: 19 SLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVY 78
Query: 594 VR-SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + LFE MK+ I P+ TY TL+ R GSL+E + AV++DM G
Sbjct: 79 GKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITC-CRRGSLYE--EAAAVFEDMKSMG 134
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I+ G G V A +L + +DG PDV AYT+ I CV + R ++A +F++M+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 613 QIQPNLVTYITLLRARSRYG 632
+P L+TY +L + G
Sbjct: 63 GCKPTLITYNVILNVYGKMG 82
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 20/321 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR---AMGLLP-DVITYNSLLNGYC 383
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ LI+ G +E+A L EEM++ GC P+
Sbjct: 384 KAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVY 443
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNT 493
IL++ C R F LSK L D + NT + + D
Sbjct: 444 TYTILMKGSHNVCSLAMT-REFFDEMLSK---GLRPDCFAYNTRICAEITLGDISKSFQL 499
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
+ SS T TYNIL+ C + + LM +M + GL P+ I++
Sbjct: 500 REVIMLEGISS---------DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITY 550
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LI A G + A + M DG+ P V YT I R L A+ F +M
Sbjct: 551 TCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLE 610
Query: 612 YQIQPNLVTYITLLRARSRYG 632
++PN +TY L+ A R G
Sbjct: 611 EGVEPNEITYNVLIHALCRMG 631
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 30/357 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ ++ + + +N++++ + + ++ + M+ +G++ D+ +YN LL C AG
Sbjct: 327 EMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAG 386
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A ++G+++ + L V TY+ ++ + + A ++KE+M+ G P+
Sbjct: 387 NQKEALLLFGDLR----RAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 442
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T++ L+ N + F+EML G P+ N + A + ++F+L
Sbjct: 443 YTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREV 502
Query: 459 WTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L S V DG T + + E Q I+N +P
Sbjct: 503 IMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISN-----------------GLQP 545
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N+M + GL P+ +++T++I A GN+ A
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ M E+G+ P+ + Y I R R + A+ F EM + PN TY L+ +
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGK 662
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 178/423 (42%), Gaps = 38/423 (8%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN- 299
L A+ H +P++ C ++ V + A++ ++ + +I +N+L++
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240
Query: 300 VNAHDLKFTLE-VYKNMQKLG--VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ K ++ + K M+ G + + +YN+++ G A E+ E++ +
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-- 298
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
K FTY+ ++ + + ++ +M + G+ P +T++++I+ +G +E
Sbjct: 299 ---KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEA 355
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD 473
A F EM G P+ N LL +A A LF R L+ T + D
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILID 415
Query: 474 GNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA---CCTD 528
G R+ ++E + K+ + P TY ILMK C+
Sbjct: 416 GYC-RLGDLEEARRLKEEMVEQ----------------GCLPDVYTYTILMKGSHNVCS- 457
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ +EM + GL P+ ++ I A G++ + Q+ +++ +G+S D V Y
Sbjct: 458 LAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNI 517
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I ++ LK A L +M +QP+ +TY L+ A G L E ++ + DM
Sbjct: 518 LIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARK---FFNDMI 574
Query: 649 KAG 651
G
Sbjct: 575 SDG 577
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + D+ + ++ + + G+ +D +YNIL+
Sbjct: 461 TREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+E+ + + + G L+ D TY+ ++ + + + A K DM+S
Sbjct: 521 GLCKTGNLKDAEEL---MMQMISNG-LQPDCITYTCLIHAHCERGFLREARKFFNDMISD 576
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ P+ +T++ +I+A G + A F +ML+ G EPN N+L+ A + A
Sbjct: 577 GLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 636
Query: 453 FRLF 456
+R F
Sbjct: 637 YRHF 640
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+ L +M S GV P+ + ++ +A + + EMLQ G EP+ N LL
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + D+ L + ++ L D N I+ + K ++ +
Sbjct: 239 DSFSKEGRKDKIDMLLKEME-ARGSSCLPNDVTYNV-VIAGLARK---------GYLEEA 287
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDAC 558
+ R S K ++ TYN L+ + +V L EM G+ P +++ +I
Sbjct: 288 AELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGL 347
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
SG +E A MR G+ PDV+ Y + + ++ K+A LF +++ + P +
Sbjct: 348 LQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTV 407
Query: 619 VTYITLLRARSRYGSLHEVQQ 639
+TY L+ R G L E ++
Sbjct: 408 LTYNILIDGYCRLGDLEEARR 428
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 172/395 (43%), Gaps = 59/395 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
+IDV G+ K++ + +++ + V N++ +N+L+N V D K E+ K M+K
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
V+ +A+Y+IL++ +G+ A++I+ E++ +++DV+ YS+++
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKN----IEMDVYVYSSMISWSRRLGN 337
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A + ++M + PN T+ +LI AG +E A L EM G + N N
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ + D A RL A+ E N D
Sbjct: 398 TMDGYCRRGKMDEALRL----------QAIMEKKGINAD--------------------- 426
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
TYNIL C Y K ++N M G+ PN +++T+ I+
Sbjct: 427 ----------------VFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIE 470
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN+ A ++ + M + G P+++ Y T I + +++KQA + EM + + P
Sbjct: 471 IYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLP 530
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L TY +L+ G V + L ++ +M G
Sbjct: 531 DLYTYSSLIHGECIVG---RVDEALKLFNEMRLKG 562
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 162/371 (43%), Gaps = 61/371 (16%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASY 327
GD ++ I+E++R +N+ +++YV++S+++ + ++K ++ M + ++ + +Y
Sbjct: 301 GDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTY 360
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ C AG A+ + E +++KGV L++ ++T + + AL+++
Sbjct: 361 GALIGGVCKAGQMEAAEILLLE---MQSKGV-DLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ + T++ L N ++A + M++ G +PN + ++ +
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEG 476
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A RLFR +ME K + VPN
Sbjct: 477 NLAEAERLFR-----------------------DMEKKGE---------VPN-------- 496
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
TYN L+ A C + + +EM GL P+ +++ LI G V+
Sbjct: 497 -------IITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVD 549
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ MR G++ +V YT+ I + R +AF L++EM + P+ + +L+
Sbjct: 550 EALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Query: 626 RARSRYGSLHE 636
GS H+
Sbjct: 610 ------GSFHK 614
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 45/256 (17%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D + PN + +I G+C G + + +++S+ V LN+ +FN+
Sbjct: 341 AFALFDEMSQRDIVPNAHTYGALIG--GVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398
Query: 298 MNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL------------------------- 330
M+ K L + M+K G+ AD+ +YNIL
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458
Query: 331 ----------LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ C GN A+ ++ + +E KG + ++ TY+T++ + + +
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLF---RDMEKKGEVP-NIITYNTLIDAYCKKEKVK 514
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A K+K +M++ G+ P+ T+SSLI+ G V++A+ LF EM G N ++
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574
Query: 441 QACVEACQFDRAFRLF 456
+ + D AF+L+
Sbjct: 575 SGLSKEGRADEAFKLY 590
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 241 LRAYDASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
L YD +K L+S PN+ I++ G+ ++ ++ D+ + NI
Sbjct: 440 LHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIIT 499
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ +K ++ M G++ D+ +Y+ L+ C+ G A +++ E++
Sbjct: 500 YNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMR 559
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
KG+ + +V TY++++ + A K+ ++M+ G+ P+ ++SL+ +
Sbjct: 560 ---LKGITR-NVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGS 611
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 44/436 (10%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F ++ L AL K PN+ ++++ G C S
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN--GYCHSKRISE 169
Query: 277 AI-------YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ + VT N + ++ A + + + M G D+ +Y +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGV 226
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G+T LA + +++ +G L+ V Y+TI+ K AL + ++M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN +T+SSLI+ N G A L +M++ P+ + L+ A V+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L YD R + S+ N F + + F
Sbjct: 343 VEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMF 384
Query: 510 SFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGG 560
F P TYN L+K C Y RV+ M EM GL N +++ ILI
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 621 YITLLRARSRYGSLHE 636
Y ++ + G + +
Sbjct: 504 YNIMIEGMCKAGKVED 519
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 254 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 367
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 461
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 462 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 159/380 (41%), Gaps = 65/380 (17%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPF----------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ G+TD N+ +K +Q
Sbjct: 230 GLCKR---------------------------GDTDLAFNLLNKMEQG------------ 250
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+P YN ++ C + AL EM T G+ PN ++++ LI
Sbjct: 251 --------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G A ++L M E ++PDV ++ I V+ +L +A L++EM I P++V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 620 TYITLLRARSRYGSLHEVQQ 639
TY +L+ + L E +Q
Sbjct: 363 TYSSLINGFCMHDRLDEAKQ 382
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S ++ A + + + + E M + G+ N T+S LIN + A+ +
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EPN + LL + + A L
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-------------------------- 174
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
D+ +T ++P T T+N L+ AL++ M
Sbjct: 175 ---DQMFVT------------------GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P+ +++ ++++ G+ + A +L M + + P V+ Y T I + K +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
A +LF+EM+ I+PN+VTY +L+ YG + + L+
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +FN+L++ V L V +M G++ D+ +YN L+ G LA E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++++ KG K +V++Y+ +V F A V +M + G+ PNT+ ++ LI+A
Sbjct: 413 HDMRN---KGC-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ +A+ +F EM + GC+P+ N L+ E + A L R +S+ VA
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD-MISEGVVA 527
Query: 468 LGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ + + E K+ + + N F S D+ TYN L+K C
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVF----QGSPLDE--------ITYNSLIKGLC 575
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + ++L +M G +P++IS ILI+ SG VE A++ K M G +PD+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + I R+ R++ ++F +++ I P+ VT+ TL+ + G +++
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 31/314 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K F AL + DM G PN++ + +LI++ + V +A+ L E
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N ++ + C+FDR R F ++ + G
Sbjct: 277 EMFLMGCVPDAETFNDVI---LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 472 YDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G D ++ + K + I NT +H D + T+Y I+ C +
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 529 -----YYR------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y++ ++++MR G PN S+TIL+D G ++ A +L M D
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S + E+
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVDEI 510
Query: 638 QQCLAVYQDMWKAG 651
+ L + +DM G
Sbjct: 511 KHALWLLRDMISEG 524
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 171/440 (38%), Gaps = 63/440 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P F ++ F ++ SAL KH PN I +T+I C ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 277 AIYEDLRSQNVTLNIYVFNS-LMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ E++ + FN ++ + D + ++ M G D +Y L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-G 393
C G A++++ + K ++ ++T++ F A V DM+++ G
Sbjct: 333 CKIGRVDAAKDLFYRIP--------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++SLI GLV A+ + +M GC+PN IL+ + + D A+
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + DG KP
Sbjct: 445 NVLNEMSA-----------DG------------------------------------LKP 457
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T +N L+ A C ++ +A + EM G P+ ++ LI ++ AL +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M +G+ + V Y T I +R +K+A L EM + +TY +L++ R
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G EV + ++++ M + G
Sbjct: 578 G---EVDKARSLFEKMLRDG 594
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 55/354 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ D+R++ N+Y + L++ + V M G+ + +N L+ A C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A EI+ E+ KG K DV+T+++++ + + AL + DM+S GV
Sbjct: 471 KEHRIPEAVEIFREMPR---KGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
NT+T+++LINA G +++A L EM+ G + N L++ A + D+A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F DG+ P+
Sbjct: 587 FEKML-----------RDGHA------------------------------------PSN 599
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ NIL+ C +A+ EM G +P+ +++ LI+ +G +E L + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ +G+ PD V + T + + + A L +E PN T+ LL++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 147/385 (38%), Gaps = 43/385 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L I L++ N H K V+ +M + + ++ +++KA C
Sbjct: 182 FKSYNVVLEI-----LVSGNCH--KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ E+M G P+ T+
Sbjct: 235 SALSL---LRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +I + +A + ML G P+ L+ + + D A LF + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRI 348
Query: 462 SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRF----- 509
K ++ + G G D + S P+ NS + K
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 510 ----------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
KP +Y IL+ C + Y V +NEM GL PN + + L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV---LNEMSADGLKPNTVGFNCL 465
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A + A++I + M G PDV + + I +K A L +M +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQ 639
N VTY TL+ A R G + E ++
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARK 550
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 519
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G D +YN L+K C AG
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ + DR
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722
>gi|397621823|gb|EJK66480.1| hypothetical protein THAOC_12600 [Thalassiosira oceanica]
Length = 820
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 179/420 (42%), Gaps = 57/420 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDA---SKKHLS-SPNMYICRTIIDVCGICGDYMKSR 276
+++ F R G+ RD +SAL + S+ H + +P++ + +T++ + +
Sbjct: 315 EVVITGFSRR-GRIRDALSALSRMEGQLDSEHHSNLNPSLSVYQTLLVSLASKQQFSQMN 373
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQK-LGVMADMASYNILL 331
+ +R + V +Y FN+L+ V A + + + Q+ GV D+ +Y +
Sbjct: 374 TLLTSMRRRGVRPTVYTFNALLKVCASSKSPRWREAVSLLSQCQREPGVSPDIITYTSTM 433
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+A A +++ +K ++LDVF Y+T + A W+ AL++ E+M
Sbjct: 434 RALAKGKQARKALDLFRAMKDTG----IQLDVFAYTTTMDACAKTNNWKKALQLLEEMRE 489
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V PN +T+ +NAC N G + A+ L + M +G NS N + A +A + D
Sbjct: 490 NNVPPNEVTYGVAVNACGNGGQWQTALSLLQTMNDSGMRINSITYNSAIAALSKAARLDA 549
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
W KTQ LGE +
Sbjct: 550 GPDPNVLW--EKTQHILGEMHS-----------------------------------RGV 572
Query: 512 KPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHI-SWTILIDACGGSGNVE 565
+ T TY+ + C + + R+ M + T G N I ++T I AC S +
Sbjct: 573 RQDTFTYSSAISVCGSAGRWEEAVRLIHQMKDSGTNGTKRNKIVAFTSAITACANSKQWD 632
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M+ DG++PD+VA+ I + + R + + L+ E+ + P++VT +L
Sbjct: 633 PANQLFQEMKRDGLAPDLVAFNALIGAGMAAGRPDEVYHLWREIGASNLSPDVVTLTEVL 692
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 507 KRFSFKPTTTTYNILMKACCTD----YYRVKALMNE-MRTVGLSPNHISWTILIDACGGS 561
+R +PT T+N L+K C + + +L+++ R G+SP+ I++T + A
Sbjct: 380 RRRGVRPTVYTFNALLKVCASSKSPRWREAVSLLSQCQREPGVSPDIITYTSTMRALAKG 439
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
AL + + M++ G+ DV AYTT + C ++ K+A L EEM+ + PN VTY
Sbjct: 440 KQARKALDLFRAMKDTGIQLDVFAYTTTMDACAKTNNWKKALQLLEEMRENNVPPNEVTY 499
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A G+ + Q L++ Q M +G
Sbjct: 500 GVAVNA---CGNGGQWQTALSLLQTMNDSG 526
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY M+A KAL M+ G+ + ++T +DAC + N + ALQ+
Sbjct: 424 PDIITYTSTMRALAKGKQARKALDLFRAMKDTGIQLDVFAYTTTMDACAKTNNWKKALQL 483
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ MRE+ + P+ V Y A+ C + + A SL + M ++ N +TY + + A S+
Sbjct: 484 LEEMRENNVPPNEVTYGVAVNACGNGGQWQTALSLLQTMNDSGMRINSITYNSAIAALSK 543
Query: 631 YGSL 634
L
Sbjct: 544 AARL 547
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 218/537 (40%), Gaps = 87/537 (16%)
Query: 137 KKLNELGVAPLELFDGSGFKLLKNECQRLLDS----GEVEMFVGLMEVLEEFRLPVKELD 192
K++NE + E +G K N C L+D G+++ + + +V+ +P+ +
Sbjct: 312 KRMNEAKLT-FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 370
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADIL--------------FCNFVREFGKKRDLV 238
I LC ++ + A+IL FC + + ++ ++
Sbjct: 371 YNVLIHGLC----------KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMG 420
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL D +K P+ +I+ C D + + E + + N+ V++ L+
Sbjct: 421 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + ++ + M GV D+ YN ++ AG +E + ++ +
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM---EEASTYLLEIQGR 537
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LK D T+ + ++ A K ++ML G+ PN ++ LIN AG + +
Sbjct: 538 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F + G P+ Q C+ + ++ + A ++F
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS------------------- 637
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
E K+K + P TY+ L+ C KA
Sbjct: 638 ------ELKEKGLV----------------------PDVFTYSSLISGFCKQGEVEKAFE 669
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM G++PN + L+D SG+++ A ++ M E G+ PD V Y+T I
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S+ + +AFSLF EM +QP+ Y L+ + G ++++ + ++++M + G
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKAMNLFREMLQKG 783
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 165/386 (42%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++++ + N ++ L+N A +L L +++ + LGV+ D+ +
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+ + G A +++ E+K KG++ DVFTYS+++ F + A ++ +
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKE---KGLVP-DVFTYSSLISGFCKQGEVEKAFELHD 672
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN +++L++ +G +++A LF+ M + G EP+S + ++ ++
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
AF LF Q
Sbjct: 733 NVAEAFSLFHEMPSKGVQ------------------------------------------ 750
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P + YN L+ CC D + L EM G + +S+ LID S ++
Sbjct: 751 -----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQ 804
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A Q+ + M + PD V YTT I ++ ++++A LF+EM+ + + VTY +L+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
++ G EV A+++ M G
Sbjct: 865 YGYNKLGQSSEV---FALFEKMVAKG 887
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
GD ++ + ++ + + N ++++ ++ D+ +E+ ++M + G++ + +Y
Sbjct: 242 GDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTY 301
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I+ C A A+ + E++ K LK D S ++ F L++K+
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQ----KTGLKPDYNACSALIDGFMREGDIDEVLRIKD 357
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M+S G+ N IT++ LI+ G +E+A + + M+ GC+PNS+ +L++
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
RA L + ME + N VP++
Sbjct: 418 NMGRALEL-----------------------LDEMEKR---------NLVPSA------- 438
Query: 508 RFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+Y ++ C D L+ +M GL PN + ++ILI A G +E
Sbjct: 439 --------VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L M G++PD+ Y I ++ ++++A + E++ ++P+ VT+ +
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550
Query: 626 RARSRYGSLHEVQQ 639
S+ G + E +
Sbjct: 551 LGYSKTGKMTEAAK 564
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 55/335 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+VY M + D+ +Y L+ A C G+ A+ + E ++ KG L + F YS +
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE---MDEKG-LNPNEFIYSLV 269
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A+++K M G+ PNT T++ + A + +A FEEM + G
Sbjct: 270 IEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL 329
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ C+ L+ + D R+ KD
Sbjct: 330 KPDYNACSALIDGFMREGDIDEVLRI-----------------------------KDVMV 360
Query: 490 ITNTP-NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P N + TYN+L+ C KA ++ M T+G P
Sbjct: 361 SCGIPINLI-------------------TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++ +LI+ N+ AL++L M + + P V+Y I K L A L
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E+M ++PN+V Y L+ A + G + E ++ L
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 177/392 (45%), Gaps = 37/392 (9%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ C+ F+ K + AL+ + K+ P+++ ++I G C G+ K+
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS--GFCKQGEVEKAFE 669
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + + NI+++N+L++ + D++ +++ M + G+ D +Y+ ++ C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ N A ++ E + +KGV + F Y+ +V + A+ + +ML G
Sbjct: 730 KSENVAEAFSLFHE---MPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 785
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
T+++++LI+ + +++A LF+EM+ P+ ++ +A + + A L
Sbjct: 786 -TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 844
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYS 503
F+ T++ T + G + G + + M K + T V +H
Sbjct: 845 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 904
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
+ +FK T +++L+ A C D L++EM +GL P+ +
Sbjct: 905 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 964
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPD 582
L+ + +G ++ A ++ + ++ G+ PD
Sbjct: 965 CNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 21/318 (6%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL---KLDVFTYSTI 369
+ M +LG M D SYNILLK C N A+E E+ H+ A + +V +YST+
Sbjct: 154 QRMPELGCMPDTVSYNILLKGLC---NEKRAEEAL-ELLHMMADDQVWSCPPNVVSYSTV 209
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +M+ G+ P+ +T++++I+ A L ++A +F++M+ G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N L+ + ++ R+ +++ G S + + K
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLE-------EMSAGGPKPNCCTYGSLLNYLCKNG 322
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
F +S KP+ TTY I++ T + L+N M G+SPN
Sbjct: 323 RCREARFFFDSMIGK-----GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
H + I A G ++ A+ I MR+ G+SPD V+Y I + R+ A F
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 608 EMKHYQIQPNLVTYITLL 625
+M + + P++V + +L+
Sbjct: 438 QMINEGVTPDIVVFSSLV 455
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 179/425 (42%), Gaps = 34/425 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I+ G K ++ ++ + + ++ + ++++ A V
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M GV ++ +YN L+ G +E+ ++ + A G K + TY +++
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKW---KEVVRMLEEMSAGGP-KPNCCTYGSLLN 316
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A + M+ G+ P+ T+ +++ A G + + L M+ G P
Sbjct: 317 YLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISP 376
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKD 486
N NI A + D+A +F R LS V+ G D R+ + E K
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436
Query: 487 KQSITN--TPNFVPNS----------HYSSFDKRF------SFKPTTTTYNILMKACCTD 528
Q I TP+ V S + ++ F P +N ++ C +
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE 496
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
++ L++ + +G+ P+ IS+ LID +G ++ A ++L+ M G+ PD +Y
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + ++ R+ A+S F +M I P +VTY T+L + E ++ +Y +
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE---LYLN 613
Query: 647 MWKAG 651
M +G
Sbjct: 614 MINSG 618
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 159/399 (39%), Gaps = 55/399 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F F + K + A+ ++ ++ SP+ +ID G + + +
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT +I VF+SL+ + E++ M +G+ ++ +N +L C G
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ Q + V +E GV + DV +Y+T++ A A K+ E M+S G+ P++ +
Sbjct: 500 MEGQRL---VDSIECMGV-RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG ++ A F +ML G P N +L + +F A L+ +
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S T K TYNI
Sbjct: 616 NSGT-----------------------------------------------KWDIYTYNI 628
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C +A + + + GL N I++ I+I A G E A+ + + +G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ +VV Y ++ + L++ SLF M+ PN
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 178/427 (41%), Gaps = 38/427 (8%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ T+ID G+C + ++ A+++ + V NI +N L++ ++ K +
Sbjct: 236 PDVVTYTTVID--GLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVV 293
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + M G + +Y LL C G A+ + + KG+ K V TY +
Sbjct: 294 RMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF---DSMIGKGI-KPSVTTYGIM 349
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + M++ G++PN ++ +A A G++++AM +F +M Q G
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409
Query: 430 EPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDG--NTDRISNMEH 484
P++ L+ A + + D A F + ++ V G D+ +E
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469
Query: 485 K--DKQSITNTPNFVP-NSHYSSFDKR---------------FSFKPTTTTYNILMKACC 526
+ ++ PN V N+ + K +P +YN L+ C
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
L+ M +VGL P+ S+ L+ +G ++ A + M +G++P VV
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + ++KR +A L+ M + + ++ TY +L + V + + ++
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNC---VDEAIKMF 646
Query: 645 QDMWKAG 651
Q++ G
Sbjct: 647 QNLCSKG 653
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 179/418 (42%), Gaps = 72/418 (17%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
PN+ TI+ C +C G M+ + + + + V ++ +N+L ++ H L T++
Sbjct: 481 PNIVFFNTIL--CNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL--IDGHCLAGTIDE 536
Query: 311 ---VYKNMQKLGVMADMASYNILLKACCLAG------------------------NTVL- 342
+ + M +G+ D SYN LL C AG NT+L
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596
Query: 343 ---AQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ + E K L + K D++TY+ I+ + A+K+ +++ S G+
Sbjct: 597 GLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL 656
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC---QFDRAF 453
N IT++ +I A G E AM LF + G N ++++ +E +FD F
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716
Query: 454 R-LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR-FSF 511
+ ++ T +Q+ + + H+ S ++ S D+R FS
Sbjct: 717 SAMEKNGTAPNSQML--------NALVRRLLHRGDIS-------RAGAYLSKLDERNFSV 761
Query: 512 KPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ +TT+ +L+ +D Y+ K+L + R + N + + LI + ++ A
Sbjct: 762 EASTTS--MLISIFSSDEYQHHAKSLPKKYRIL----NEANSSALIKK---ARRIDDAYS 812
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + M G++PDVV Y T + ++ R +A L+ M + + Q N+ TY +L
Sbjct: 813 LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNG 870
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 164/394 (41%), Gaps = 29/394 (7%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S +T + +N++++ +F+ E+Y NM G D+ +YNI+L C
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ A +++ ++L +KG L+L++ T++ ++ + A+ + + + G+
Sbjct: 636 SNCVDEAIKMF---QNLCSKG-LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ 691
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---- 452
N +T+ ++ G +E+ LF M + G PNSQ N L++ + RA
Sbjct: 692 NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 751
Query: 453 -------FRLFRSWTLSKTQVALGEDYDGNTDRISN----MEHKDKQSITNTPNFVPNSH 501
F + S T + ++Y + + + + ++ + ++
Sbjct: 752 SKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDA- 810
Query: 502 YSSFDKRF--SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
YS F + P TYN ++ + K L M N ++ I+++
Sbjct: 811 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNG 870
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
S V+ A ++ + + G+ +++ + I ++ R + A LF + + P+
Sbjct: 871 LCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPD 930
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY + GSL E ++ M K+G
Sbjct: 931 VVTYRLVAENLIEEGSLEEFD---GLFLTMEKSG 961
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDA-CGGSGNVE 565
P TY+IL+ C R+ L + GL +HI L++ C G E
Sbjct: 92 PNRCTYSILIGCFC----RMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI---QPNLVTYI 622
+L+ M E G PD V+Y +K KR ++A L M Q+ PN+V+Y
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 623 TLLRA 627
T++
Sbjct: 208 TVING 212
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+ +D K++ P I TI+ + G K+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + L +Y + L+ A ++ ++ NM K G D+ N L+ AG
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E++ L+ +V TY+T++K ++K W++ K+KE+
Sbjct: 351 LADAIKLFEEMESLQCTP----NVVTYNTVIKALFESKARASEAFLWYE---KMKEN--- 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P++ T+S LI+ VE+A+ L EEM + G P L+ A +A +++
Sbjct: 401 -GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF+ L E+ ++ R+ ++H K + + N K+
Sbjct: 460 ANELFQE---------LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM-----KKL 505
Query: 510 SFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN LM + TD +L+ M G +P+ S I+++ +G +
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTD--EAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA+++ M+ + PDVV+Y T + R+ ++A L +EM + +L+TY ++L
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 626 RARSRYGSLH 635
A + H
Sbjct: 624 EAVGKIDEDH 633
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 194/463 (41%), Gaps = 41/463 (8%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R C++ AD+ V+ GK + + AL + K P ++I + G
Sbjct: 151 VRSTCVIGPADL--SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---KFTLEVYKNMQKLGVMADMASY 327
+ K +Y ++ ++ L V S + L + ++ M++ G+ Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L G ++ G V+ ++ KG L V+TY+ ++K A + A +
Sbjct: 269 TTILGIYFKLGRV---EKALGLVQEMKEKGC-ALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G P+ + ++LIN AG + A+ LFEEM C PN N +++A E+
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDY------DG--NTDRISN----MEHKDKQSITNTPN 495
RA F + K + + DG T+R+ +E D++ P
Sbjct: 385 A--RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----------------NE 538
S ++ K ++ + L + C RV A+M NE
Sbjct: 443 -AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +G +P+ ++ L+ G + A +L+ M E+G +PD+ ++ + R+
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K A +F MK+ +I+P++V+Y T+L SR G E + +
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 162/411 (39%), Gaps = 62/411 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQK 317
I+ V G K+ +I+ ++ + +NS LM H+ E+Y M
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEK--VHELYNEMCN 222
Query: 318 LG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + D +Y+ L+ A G A ++ E+K K+ Y+TI+ ++
Sbjct: 223 EGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKI----YTTILGIYFKL 278
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ AL + ++M G T++ LI AG VE+A +F ML+ GC+P+
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLI 338
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ +A + A +LF ++ +S+ TPN
Sbjct: 339 NNLINLLGKAGRLADAIKLF----------------------------EEMESLQCTPNV 370
Query: 497 VPNSHYSSFDKRFSFK-------------------PTTTTYNILMKACCTDYYRVKALM- 536
V ++ + F K P++ TY+IL+ C KAL+
Sbjct: 371 V--TYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLL 428
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G +P ++ LI+A G + E A ++ + +RE+ Y IK +
Sbjct: 429 LEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGK 488
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
RL +A LF EMK P++ Y L+ R G E L ++
Sbjct: 489 CGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEE 539
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 49/310 (15%)
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+V H + VLK+DV + I + F KW + D + T+ +LI+
Sbjct: 88 KVDHRLVREVLKIDVEIHVKI-QFF---KWAGKRRNFEHD---------STTYMALIHCL 134
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG++ + +EM+++ C + +++ +A ++A +F K +
Sbjct: 135 DEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCK-PT 193
Query: 469 GEDYDGNTDRISNMEHKDK-----QSITNTPNFVP------------------NSHYSSF 505
Y+ + H +K + N + +P +S S F
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253
Query: 506 D--KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDA 557
D K PT Y ++ Y+++ L+ EM+ G + ++T LI
Sbjct: 254 DEMKENGLHPTAKIYTTILGI----YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKG 309
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +G VE A I M ++G PDVV I + ++ RL A LFEEM+ Q PN
Sbjct: 310 VGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPN 369
Query: 618 LVTYITLLRA 627
+VTY T+++A
Sbjct: 370 VVTYNTVIKA 379
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 170/407 (41%), Gaps = 62/407 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C+ + + D+ A+ ++ + + PN+ +C T++ + L
Sbjct: 358 YCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV----------------KGLS 401
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
Q + L L++ M + G D+ +YN+++ C G A
Sbjct: 402 QQGLILQ-----------------ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ V AKG L DVFT++T++ + A+++ + M + GV+P+ IT++S
Sbjct: 445 DNL---VIDAIAKGHLP-DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNS 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWT 460
++N AG E M F+ M++ GC PN NIL ++ +A + + A L ++
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF---DKRFSFKPTTTT 517
L+ V G G D N + Y F D+++ F T T
Sbjct: 561 LTPDVVNFGTLMKGFCD-----------------NGDLDGAYQLFKRVDEQYKFSHTIAT 603
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNI++ A + + L N+M G SP+ ++ ++ID +GN+ L +
Sbjct: 604 YNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKI 663
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E G+ P + + + +R+ +A + M H I P +V I
Sbjct: 664 EKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTI 710
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ D+ +YN L+ C V A+ ++ + +G + D FTY++I+ +
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHY---LRKMVNEG-YEPDGFTYNSIIDGYCKLGM 335
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
Q A ++ D G P+ T+ SLIN G +++A+++F E ++ G +PN CN
Sbjct: 336 MQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNT 395
Query: 439 LLQACVEACQFDRAFRLFRS----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
L++ + +A +L WT + L +I + D
Sbjct: 396 LVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC--------KIGCVSDADNL 447
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
I + + H P T+N L+ C A+ ++ M G+SP
Sbjct: 448 VI----DAIAKGHL----------PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSP 493
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ +++ +G E + K+M E G P+++ Y + +++++++A +L
Sbjct: 494 DVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
EEM++ + P++V + TL++ G L Q + +K
Sbjct: 554 EEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYK 596
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 160/386 (41%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G ++ ++E + N ++ +N++MN+ F +VY M+ G++ D+ ++
Sbjct: 90 GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A+ + + ++ ++G + Y T++ F + A ++ E
Sbjct: 150 TIRMKSFCRTSRPHAARRL---LNNMPSQGC-ESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G+ P+ + ++ LI+ G V+++ L ++L+ G PN NI +Q +
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A RL DG ++
Sbjct: 266 MLNEAIRLL----------------DGVGRGLT--------------------------- 282
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYN L+ C ++ V+A + +M G P+ ++ +ID G ++
Sbjct: 283 -----PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A QIL+ G PD Y + I + + +A ++F E ++PNLV TL+
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ S+ G + Q L + +M + G
Sbjct: 398 KGLSQQGL---ILQALKLMNEMSENG 420
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 152/353 (43%), Gaps = 40/353 (11%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ M LG+ D+ ++N L+ C G+ ++ + +V K + ++FT +
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV----LKRGVSPNLFTVNIF 257
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI-NACANAGLVEQAMHLFEEMLQAG 428
++ F A+++ D + G+TP+ IT+++LI C N +VE A H +M+ G
Sbjct: 258 IQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVE-AEHYLRKMVNEG 315
Query: 429 CEPNS--------QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EP+ C + + + D AF+ F + + G DG+ DR
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
N+ ++ + KP N L+K ++AL MNE
Sbjct: 376 NVFNEAMEK--------------------GLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G SP+ ++ ++I+ G V A ++ G PDV + T I + +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L A + + M ++ + P+++TY ++L + G +V + ++ M + G
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDV---MGTFKLMMEKG 525
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 185/433 (42%), Gaps = 23/433 (5%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A+ + ++ PN+ T+ID G+ G Y ++ E +
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + ++ L+ A + V K M + G ++ YN L+ + AG+
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS- 372
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L + I E+K L L L TY+T++K + + +A ++ ++MLS G N +
Sbjct: 373 -LNKAI--EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGS 429
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++S+I + + + A+ EML P L+ + + +A L+ +
Sbjct: 430 FTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF- 488
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
L + + +T + + H ++ F F +YN
Sbjct: 489 -------LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGR----GFVMDRVSYNT 537
Query: 521 LMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ CC + +A M +EM GL P++ +++ILI VE A+Q + +G
Sbjct: 538 LISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG 597
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
M PDV Y+ I C +++R ++ LF+EM +QPN V Y L+ A R G L
Sbjct: 598 MIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL---S 654
Query: 639 QCLAVYQDMWKAG 651
L + +DM G
Sbjct: 655 MALELREDMKHKG 667
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 162/388 (41%), Gaps = 59/388 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L+
Sbjct: 459 SPGGGLLTTLIS--GLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC GN L E + + + KG LK D +TYS
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCC--GNKKL-DEAFMFMDEMVKKG-LKPDNYTYSI 572
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ + + A++ D G+ P+ T+S +I+ C A E+ LF+EM+
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L+ A + R+ RL + L + +M+HK
Sbjct: 633 LQPNTVVYNHLIGA------YCRSGRLSMALELRE-----------------DMKHK--- 666
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L+ EMR GL P
Sbjct: 667 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEP 705
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 706 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 765
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSL 634
EM+ I P+ +TY + + G +
Sbjct: 766 HEMREKGIVPDSITYKEFIYGYLKQGGV 793
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 53/335 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ G + D + N LL C AG +E + K + +G + +D +Y+T
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKL---EEGFRIQKEILGRGFV-MDRVSYNT 537
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ + + + G
Sbjct: 538 LISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG 597
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + +LF + +SN
Sbjct: 598 MIPDVYTYSVMIDGCCKAERTEEGQKLF-------------------DEMMSN------- 631
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ +P T YN L+ A C AL +M+ G+SP
Sbjct: 632 ---------------------NLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISP 670
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A +L+ MR +G+ P+V YT I + ++ + L
Sbjct: 671 NSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 730
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM + PN +TY ++ +R G++ E + L
Sbjct: 731 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 765
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 38/361 (10%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV D+ + + A C G A E++ + +E GV+ +V TY+T++ +
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSK---MEEAGVVP-NVVTYNTVIDGLGMSGR 302
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A KE M+ GV P IT+S L+ A + A + +EM + G PN N
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---------GNTDRISNMEHKDKQS 489
L+ + +EA ++A + + +SK Y+ G D I+ K+ S
Sbjct: 363 LIDSLIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKSGQAD-IAERLLKEMLS 420
Query: 490 I---TNTPNFVPN-----SHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRV 532
I N +F SH+ FD F P L+ C
Sbjct: 421 IGFNVNQGSFTSVICLLCSHH-MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479
Query: 533 KALMNEMRTV--GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ ++ + G + + L+ +G +E +I K + G D V+Y T I
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
C +K+L +AF +EM ++P+ TY L+R ++++V++ + + D +
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLL---NMNKVEEAIQFWGDCKRN 596
Query: 651 G 651
G
Sbjct: 597 G 597
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 29/253 (11%)
Query: 189 KELDEEFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
K+LDE F + V K PD Y + +L N V E A++ +
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPD-----NYTYSILIRGLLNMNKVEE---------AIQFWG 591
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAH 303
K++ P++Y +ID C + + +++++ S N+ N V+N L+ +
Sbjct: 592 DCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L LE+ ++M+ G+ + A+Y L+K + A+ + E++ +E L+ +V
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMR-MEG---LEPNV 707
Query: 364 FTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
F Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V +A L
Sbjct: 708 FHYTALIDGYG--KLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 764
Query: 421 FEEMLQAGCEPNS 433
EM + G P+S
Sbjct: 765 LHEMREKGIVPDS 777
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 19/332 (5%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + H+ KGV DV+ +
Sbjct: 201 LALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF----HVVCKGV-SPDVYLF 255
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+++ M AGV PN +T++++I+ +G ++A E+M++
Sbjct: 256 TTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVE 315
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ +A + A+ + + T + + N +N+
Sbjct: 316 RGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT--------EKGFPPNVIVYNNL---- 363
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGL 544
S+ + T++TYN L+K C + L+ EM ++G
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ N S+T +I + AL+ + M MSP TT I + + +A
Sbjct: 424 NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVE 483
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L+ + + + T LL G L E
Sbjct: 484 LWLKFLNKGFLVDTKTSNALLHGLCEAGKLEE 515
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 178/431 (41%), Gaps = 94/431 (21%)
Query: 227 FVREFGKKRDLVSALRAYDAS--KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+RE G + + A+R +D + ++ + + +I G G ++ ++E S
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ F++L++ F ++V+++M+ G+ ++ +YN ++ AC G
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGG---- 271
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +V++F E+ML GV P+ IT++
Sbjct: 272 ---------------------VEFKRVVEIF-------------EEMLRNGVQPDRITYN 297
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SL+ C+ GL E A +LF EM+ G + + N LL A + Q D A+ +
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM------ 351
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+E K+ + P TY+ +
Sbjct: 352 -------------------LEMPGKKIL----------------------PNVVTYSTMA 370
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A L NEM+ +G+ + +S+ L+ G E AL++ K M G+
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DVV Y + + + + +F+EMK ++ PNL+TY TL+ S+ GSL+E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK-GSLYE--EA 487
Query: 641 LAVYQDMWKAG 651
+ V+++ +AG
Sbjct: 488 MEVFREFKQAG 498
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 185/457 (40%), Gaps = 78/457 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +GK A++ +++ K PN+ +ID CG G ++ + I+E++
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + +NSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 341 VLAQEI-----------------------------------YGEVKHLEAKGVLKLDVFT 365
LA EI Y E+K L + LD +
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG----IGLDRVS 400
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ ++A ++ ALKV ++M S+GV + +T+++L++ G + +F+EM
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDY------DGNTD 477
+ PN + L+ + ++ A +FR + + K V L + +G D
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Query: 478 R-ISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
+ ++ K+ I PN V NS +F + +TT L+ R
Sbjct: 521 SAVLLLDEMTKEGI--RPNVVTYNSIIDAFGR-------STTAEFLVDGVGASNERQSES 571
Query: 536 MNEMRTVGLSPNHISW----------TILIDACG-------GSGNVEGALQILKIMREDG 578
M G+ + I+W ++ + G G + L + K M E
Sbjct: 572 PTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELE 631
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ P+VV ++ + C R K ++ A L EE++ + Q
Sbjct: 632 IKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQ 668
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 171/399 (42%), Gaps = 56/399 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P ++++ + F K + +A + +D SP+ T+I G G ++
Sbjct: 359 IIP-DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++ ++ S+ + + + +L++V A ++ ++ M ++G+ ++ +Y L+
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ E++ K L+L+V Y+++V A + A+K+ ++M AG
Sbjct: 478 LCKHGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ IT++++I+A G +++A L +EML G +P N+L+ +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL W L K V P
Sbjct: 594 RLL-GWMLEKGIV----------------------------------------------P 606
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN LMK C + MR G++P+ ++ ILI + N++ A +
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
K M E G P V +Y IK + ++ +A LFEEM+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 167/384 (43%), Gaps = 21/384 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
G ++R + + L S + + + N+ ++ A++ + K + G+ + SYNI
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNI 263
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ + C G A + ++ + DV +YST++ + + ALK+ +DM
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTP----DVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ PN T++S+I G +A + EM+ P++ L+ +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A + F LSK + DY T I K P + + R
Sbjct: 380 RTANKWFDE-MLSK---KISPDYITYTTLIQGFGQGGKV-------IEPQNLFHEMISR- 427
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TY L+ C V A L NEM +G++PN +++ LID G ++ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L MR+ G+ +V Y + + ++ ++QA L +EM+ I P+ +TY T++ A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G + + + L Q+M G
Sbjct: 548 YCRLGDIDKAHKLL---QEMLDRG 568
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 191/433 (44%), Gaps = 49/433 (11%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
+L AL+ D + PN Y +II + G ++ + ++ SQ + + V+
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 296 SLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++ ++ + + M + D +Y L++ G + Q ++ E +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE---M 424
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
++G LK D TY+T++ V+ A A + +M+ G+TPN +T+ +LI+ G
Sbjct: 425 ISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
++ A L +EM + G + N N ++ +A ++A +L + + +VA G D D
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMK-----EMEVA-GIDPD 537
Query: 474 GNTD--------RISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T R+ +++ HK Q + + +PT T+N+LM
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDR----------------GLQPTVVTFNVLMN 581
Query: 524 ACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C D R L+ M G+ P+ I++ L+ ++ +I K MR G
Sbjct: 582 GFCMLGMLEDGDR---LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++PD Y IK +++ LK+A+ L++EM P + +Y L++ R+ +
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIK---RFYKKRKFX 695
Query: 639 QCLAVYQDMWKAG 651
+ ++++M G
Sbjct: 696 EARELFEEMRGHG 708
>gi|298706229|emb|CBJ29270.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 183/451 (40%), Gaps = 96/451 (21%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADM 324
G G + + ++ +N ++N+ + + K V ++M GV D+
Sbjct: 106 GGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSGRWKEATSVLESMPGKGVAPDV 165
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYSTIVKVFADAKWWQM 381
SY ++AC A E YG + + A+ +K ++ ++T++ FA + +
Sbjct: 166 VSYGAAIEAC-RAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSGRSRQ 224
Query: 382 ALK-VKEDMLSAGVTPNTITWSSLINA--------------------------------C 408
AL V+EDM++AGV P+ TWS+LI+A C
Sbjct: 225 ALSLVEEDMVNAGVKPDLFTWSTLIDAYRAAGESSRDAAELLGRMREAGVEPDVWCFNNC 284
Query: 409 ANA----GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------ 458
NA G E A L E+M AG EPN + +++ACV A ++ L R+
Sbjct: 285 LNAARRRGEWELAFGLLEDMGAAGVEPNCWSYSAVMKACVNAEEWTLVPALLRAMKEGGS 344
Query: 459 ------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK----- 507
W + A G+ G ++ ++ KD + P+ S+ S+ D
Sbjct: 345 TAPPNVWNFNICLDAYGKS--GEWEKAVSLLRKDMPAAGVAPDVT--SYSSAIDAAGKAG 400
Query: 508 ------------RFSFKPT---TTTYNILMKACCTDYY--RVKALMNEMRTV-GLSPNHI 549
R + P+ + YNI + C R +L++E R GL PN
Sbjct: 401 EWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRALSLLSESRAAAGLPPNLR 460
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK------------ 597
S+ IDAC +G E AL +L+ M E G+ PDVV++T+AI K
Sbjct: 461 SFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAAAAAAG 520
Query: 598 --RLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
L A L EEMK + P ++ ++
Sbjct: 521 ERELSLALGLLEEMKSRGLPPTSFSHSAAIK 551
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 176/411 (42%), Gaps = 40/411 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA-IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
P+++ T+ID G+ + A + +R V +++ FN+ +N + +
Sbjct: 240 PDLFTWSTLIDAYRAAGESSRDAAELLGRMREAGVEPDVWCFNNCLNAARRRGEWELAFG 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M GV + SY+ ++KAC A L + +K E +V+ ++ +
Sbjct: 300 LLEDMGAAGVEPNCWSYSAVMKACVNAEEWTLVPALLRAMK--EGGSTAPPNVWNFNICL 357
Query: 371 KVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A+ +++DM +AGV P+ ++SS I+A AG + A+ L++E +A
Sbjct: 358 DAYGKSGEWEKAVSLLRKDMPAAGVAPDVTSYSSAIDAAGKAGEWDTALALWDEA-RAAL 416
Query: 430 EP---NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG-----EDYDGNTD---R 478
P NS NI + C +A DRA L LS+++ A G ++ D R
Sbjct: 417 PPSALNSHAYNIAIGVCGKAGLADRALSL-----LSESRAAAGLPPNLRSFNAAIDACAR 471
Query: 479 ISNMEH-----KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
E ++ + P+ V ++S F A +
Sbjct: 472 AGRWERALSLLREMEEAGLEPDVV---SFTSAIAAFRGGKAAAAAAAAAAAGERELSLAL 528
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ EM++ GL P S + I C + E AL++ + +R G + D A+T I C
Sbjct: 529 GLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSC 588
Query: 594 VR---------SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
R R + A +L +EM+ + P++ T+ +RA G H
Sbjct: 589 ARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRACCNGGKWH 639
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 131/326 (40%), Gaps = 66/326 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNV----NAHDLK 306
+P++ + ID G G++ + A++++ R+ LN + +N + V D
Sbjct: 383 APDVTSYSSAIDAAGKAGEWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRA 442
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+L + ++ G+ ++ S+N + AC AG A + ++ +E G L+ DV ++
Sbjct: 443 LSL-LSESRAAAGLPPNLRSFNAAIDACARAGRWERALSL---LREMEEAG-LEPDVVSF 497
Query: 367 STIVKVFADAKW--------------WQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ + F K +AL + E+M S G+ P + + S+ I C +A
Sbjct: 498 TSAIAAFRGGKAAAAAAAAAAAGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDAN 557
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
E+A+ LFEE+ +G + ++ +C R W +T VAL
Sbjct: 558 QHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGR-W---ETAVAL---- 609
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
+ ME P+ T+N ++ACC ++
Sbjct: 610 ------LDEMEAS------------------------GVAPSVATFNGAIRACCNGGKWH 639
Query: 531 RVKALMNEMRTV-GLSPNHISWTILI 555
+L+ M V G+ PN S LI
Sbjct: 640 LGSSLLRRMSAVDGVDPNVSSMNALI 665
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ RV +L+ + G NHI + I A SG + A +L+ M G++PDVV+Y
Sbjct: 111 WERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSGRWKEATSVLESMPGKGVAPDVVSYGA 170
Query: 589 AIKVC--VRSKRLKQAFSLFEEM----KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
AI+ C R R +A+ + M ++PN+ + T+L A ++ G +Q L+
Sbjct: 171 AIEACRAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSG---RSRQALS 227
Query: 643 -VYQDMWKAG 651
V +DM AG
Sbjct: 228 LVEEDMVNAG 237
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHL--SSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + GK + +AL +D ++ L S+ N + I VCG G ++ ++ +
Sbjct: 389 YSSAIDAAGKAGEWDTALALWDEARAALPPSALNSHAYNIAIGVCGKAGLADRALSLLSE 448
Query: 282 LRSQ-NVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA----- 333
R+ + N+ FN+ ++ A ++ L + + M++ G+ D+ S+ + A
Sbjct: 449 SRAAAGLPPNLRSFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGK 508
Query: 334 -------CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
AG L+ + G ++ ++++G L F++S +K+ DA + AL++
Sbjct: 509 AAAAAAAAAAAGERELSLAL-GLLEEMKSRG-LPPTSFSHSAAIKLCTDANQHERALELF 566
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLV---------EQAMHLFEEMLQAGCEPNSQCCN 437
E++ ++G + ++++I++CA E A+ L +EM +G P+ N
Sbjct: 567 EELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFN 626
Query: 438 ILLQACVEACQFDRAFRLFR 457
++AC ++ L R
Sbjct: 627 GAIRACCNGGKWHLGSSLLR 646
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 30/215 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV------------- 300
PN+ ID C G + ++ ++ ++ + ++ F S +
Sbjct: 457 PNLRSFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAAA 516
Query: 301 ---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+L L + + M+ G+ S++ +K C A A E++ E L A G
Sbjct: 517 AAAGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEE---LRASG 573
Query: 358 VLKLDVFTYSTIVKVFA---------DAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
D ++ I+ A W+ A+ + ++M ++GV P+ T++ I AC
Sbjct: 574 -QAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRAC 632
Query: 409 ANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQA 442
N G L M G +PN N L++
Sbjct: 633 CNGGKWHLGSSLLRRMSAVDGVDPNVSSMNALIRG 667
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
GG G E L +L+ DG + + Y AI +S R K+A S+ E M + P++
Sbjct: 106 GGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSGRWKEATSVLESMPGKGVAPDV 165
Query: 619 VTYITLLRA 627
V+Y + A
Sbjct: 166 VSYGAAIEA 174
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 180/419 (42%), Gaps = 66/419 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA-----SKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
+ F + K R + AL ++ S L P++ T+ID G+C G +
Sbjct: 341 VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID--GLCKVGRQEE 398
Query: 275 SRAIYEDLRSQNVTL-NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ E +RSQ + N +N L++ A ++ E++ M K GV ++ + N L+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A E + E ++ KG LK + TY+ +++ F + + A+++ ++ML
Sbjct: 459 DGMCKHGRINGAVEFFNE---MQGKG-LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG +P+ I + +LI+ + AG +++A + +M +AG P+ N+L+ + D
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A+ + + ME+
Sbjct: 575 AYEMLKE-----------------------MENA------------------------GI 587
Query: 512 KPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYN L+ + D+ LM +M GL P +++ LI A +GN++ A++
Sbjct: 588 KPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMK 647
Query: 570 ILKIMREDG-MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
I + M + P+ V Y I R ++ A SL ++MK ++PN T+ + +
Sbjct: 648 IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG 706
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 51/344 (14%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-K 360
A + K + M+++ + ++ ++ IL+ C A E++ ++ E+ G L +
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMH 419
DV TY+T++ + L + E M S PNT+T++ LI+ A ++E A
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
LF++M + G PN N L+ + + + A F G+ GN
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ--------GKGLKGNA--- 486
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
TY L++A C + + L +
Sbjct: 487 ------------------------------------VTYTALIRAFCNVNNIEKAMELFD 510
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G SP+ I + LI +G ++ A +L M+E G SPD+V++ I R
Sbjct: 511 EMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKN 570
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+L +A+ + +EM++ I+P+ VTY TL+ S+ G + +
Sbjct: 571 KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLM 614
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 142/352 (40%), Gaps = 66/352 (18%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V + KLG + + AS N LL A A + E+K ++ ++ +V T+ +
Sbjct: 291 DVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD----IQPNVVTFGIL 346
Query: 370 VKVFADAKWWQMALKVKEDMLSAG------VTPNTITWSSLINACANAGLVEQAMHLFEE 423
+ + AL+V E M + G V P+ IT+++LI+ G E+ + L E
Sbjct: 347 INHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405
Query: 424 ML-QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M Q C PN+ N L+ +A + A LF
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELF-------------------------- 439
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEM 539
D+ + P P T N L+ C + R+ NEM
Sbjct: 440 ---DQMNKDGVP------------------PNVVTLNTLVDGMCK-HGRINGAVEFFNEM 477
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL N +++T LI A N+E A+++ M E G SPD + Y T I ++ +L
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A + +MK P++V++ L+ R L E + L ++M AG
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML---KEMENAG 586
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 121/308 (39%), Gaps = 27/308 (8%)
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G V +EI G V V ++ I ++ + A V ++ G
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRT-DRAWDVLHGLMKLGGVME 304
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++L+ A A ++ L EM + +PN IL+ + + D A +F
Sbjct: 305 AASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364
Query: 458 SWTLSKTQVALGED----YDGNTDRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKR 508
++ L E Y+ D + + +++ + + + P +PN
Sbjct: 365 KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN--------- 415
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
T TYN L+ C + + L ++M G+ PN ++ L+D G + G
Sbjct: 416 ------TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING 469
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A++ M+ G+ + V YT I+ +++A LF+EM P+ + Y TL+
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLIS 529
Query: 627 ARSRYGSL 634
S+ G L
Sbjct: 530 GLSQAGKL 537
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 170/397 (42%), Gaps = 38/397 (9%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E+ +Q +N LM+ A L ++ + + G+ D + N LLK
Sbjct: 141 NRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLK 200
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A T +E + H ++ + +YS ++K D Q AL + + M
Sbjct: 201 CLCYANRT---EEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQ 257
Query: 393 G--VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G +P+ + +S++I+ N G +A LF EM + G +P+ N+++ A +A D
Sbjct: 258 GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM--EHKDKQSITNTPNFVP-N 499
+A + R T Q + G G + M E K + I PN V N
Sbjct: 318 KAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLI---PNIVTCN 374
Query: 500 SHYSSFDKRF---------------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
S +S K KP +Y L+ ++ + + L N M++
Sbjct: 375 SFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN 434
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G++ N +TILI A G V+ A+ I M++ G+SPDVV Y+T I R RL A
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
F +M IQPN Y ++++ +G L + ++
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE 531
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 37/340 (10%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK ++++ M+K G++ ++ + N L + C G + A E + + AKG K D+F
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF---DSMTAKG-HKPDIF 406
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y T++ +A + + + M S G+ N ++ LI+A A G+V+ AM +F EM
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G P+ + ++ F R RL + VA G NT S++
Sbjct: 467 QQQGVSPDVVTYSTVIST------FSRMGRLTDAMEKFNQMVARG--IQPNTAVYSSIIQ 518
Query: 485 ---------KDKQSITNTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
K K+ ++ N +P +P ++ ++ + C D + A
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIP-------------RPDIVFFSSVINSLCKDGRVMDA 565
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + +G P I++ LID G ++ A +IL M G+ PD+V Y T +
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++ R+ +LF EM+ ++PN VTY +L R G
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 45/307 (14%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVF-TYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C+ LA ++ V EA + + F TY+ ++ A+ + L + +L G
Sbjct: 128 CITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTG 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ + IT ++L+ A E+A++ L M + GC PN+ +I+L+A + RA
Sbjct: 188 LKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRA 247
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L + KQ +P+ V YS+ F +
Sbjct: 248 LDLLQMMA--------------------------KQGGACSPDVVA---YSTVIHGFFNE 278
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T KAC +L +EM G+ P+ +++ ++IDA + ++ A +L+
Sbjct: 279 GETG------KAC--------SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M DG PD V Y+ I RLK+A +F EMK + PN+VT + L + ++G
Sbjct: 325 QMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384
Query: 633 SLHEVQQ 639
E +
Sbjct: 385 RSKEAAE 391
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/463 (18%), Positives = 180/463 (38%), Gaps = 46/463 (9%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+ DI +C + + + + +++ K + + N ++ +I G +
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ +++ Q V+ ++ ++++++ + + T +E + M G+ + A Y+ +++ C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 336 LAGNTVLAQEIYGEV------------------------KHLEAKGVLKL--------DV 363
+ G V A+E+ E+ + ++A + L V
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGV 581
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
T+++++ + A K+ + M GV P+ +T+++L++ G + + LF E
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFRE 641
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G +PN+ I+L A + A + F S T V + Y +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV-SIYGIILGGLCRNN 700
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
D+ I + + +FS T N + K K L + G
Sbjct: 701 CADEAIIL-------FQKLGTMNVKFSITILNTMINAMYKV--QRKEEAKELFATISASG 751
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ ++I G VE A + M + G+ P I++ + + +A
Sbjct: 752 LLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE-VQQCLAVYQ 645
+ ++ +I T +L SR G E ++ A YQ
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQ 854
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 217 VPRADILF-CNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR DI+F + + K ++ A +D + P + ++ID + G K+
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
I + + V +I +N+L++ + + L +++ MQ+ GV + +Y I+L
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG TV A++ + E+ +E+ + + + Y I+ A+ + + + +
Sbjct: 661 LFRAGRTVAARKKFHEM--IESGTTVTVSI--YGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
V + +++INA E+A LF + +G PN +++
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 178/431 (41%), Gaps = 94/431 (21%)
Query: 227 FVREFGKKRDLVSALRAYDAS--KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+RE G + + A+R +D + ++ + + +I G G ++ ++E S
Sbjct: 156 LLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALS 215
Query: 285 QNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ ++ F++L++ F ++V+++M+ G+ ++ +YN ++ AC G
Sbjct: 216 EGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGG---- 271
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +V++F E+ML GV P+ IT++
Sbjct: 272 ---------------------VEFKRVVEIF-------------EEMLRNGVQPDRITYN 297
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SL+ C+ GL E A +LF EM+ G + + N LL A + Q D A+ +
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM------ 351
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+E K+ + P TY+ +
Sbjct: 352 -------------------LEMPGKKIL----------------------PNVVTYSTMA 370
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A L NEM+ +G+ + +S+ L+ G E AL++ K M G+
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
DVV Y + + + + +F+EMK ++ PNL+TY TL+ S+ GSL+E +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSK-GSLYE--EA 487
Query: 641 LAVYQDMWKAG 651
+ V+++ +AG
Sbjct: 488 MEVFREFKQAG 498
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 196/451 (43%), Gaps = 49/451 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +GK A++ +++ K PN+ +ID CG G ++ + I+E++
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
V + +NSL+ V + + ++ M G+ D+ +YN LL A C G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI E + K +L +V TYST+ +A A + AL + +M G+ + ++
Sbjct: 345 DLAYEIMLE---MPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ A G E A+ + +EM +G + + N LL + +F+ R+F+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE-- 458
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ K +V + + ++ K S+ V + F K+ K Y+
Sbjct: 459 MKKDRV-----FPNLLTYSTLIDVYSKGSLYEEAMEV----FREF-KQAGLKADVVLYSE 508
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-- 576
L+ A C + A L++EM G+ PN +++ +IDA G S E + + E
Sbjct: 509 LINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQ 568
Query: 577 ---------DGMSPDVVAYT-----------------TAIKVCVRSKRLKQAFSLFEEMK 610
+G+ + + A K + + ++ S+F++M
Sbjct: 569 SESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMH 628
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+PN+VT+ +L A SR S+ + L
Sbjct: 629 ELEIKPNVVTFSAILNACSRCKSIEDASMLL 659
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 35/371 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
K+ I+ +L+S+ V L+ Y F ++ F + +++ G+ ++ Y L+
Sbjct: 142 KAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
CC GN +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 201 DGCCKYGNVMLAKNLFCKMDRLG----LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 257 SGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A +L LS V +G D + M+ T + N SS
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCD-VGKMD---------TAVRLFNQLKSS---- 362
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TYN L+ Y +V+ L + EM ++P+ +++TILIDA
Sbjct: 363 -GLSPTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E A ++ +M + G+ PDV Y+ I +K+A LF+ + +QPN V Y
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477
Query: 623 TLLRARSRYGS 633
T++ + GS
Sbjct: 478 TMIHGYCKEGS 488
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 169/376 (44%), Gaps = 26/376 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM++ G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + G ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + ++ ++V Y D + + + +K
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT----YTILIDAFARLNYTEK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S ++ P TY++L+ C + L + + L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQ 470
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++L M GM P+V ++ + I + R ++ K+A L
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELL 530
Query: 606 FEEMKHYQIQPNLVTY 621
+M + ++P++ Y
Sbjct: 531 LGQMINSGLKPSVSLY 546
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 145/340 (42%), Gaps = 56/340 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
N K V+ D S+ I++K CC AG V + + LE G L +V Y+T++
Sbjct: 148 NELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRL---LAMLEEFG-LSPNVVIYTTLIDGC 203
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A + M G+ PN T+S L+N GL + ++E M ++G PN+
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N L+ D+AF++F + + +A G
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAE--MREKGIACG------------------------ 297
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
TYNIL+ C + L++++ VGLSPN +++
Sbjct: 298 ---------------------VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILI+ G ++ A+++ ++ G+SP +V Y T I + + L A L +EM+
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I P+ VTY L+ A +R L+ ++ ++ M K+G
Sbjct: 397 RCIAPSKVTYTILIDAFAR---LNYTEKACEMHSLMEKSG 433
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 21/274 (7%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y TIV + + AL M+ G P + T+++L+ + ++A +F E L
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNE-L 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ ++ I+++ C EA F + FRL + LS V DG + M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K+ + VPN H TY++LM + + + M+
Sbjct: 211 LAKNLFCKMDRLGLVPNPH---------------TYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ PN ++ LI G V+ A ++ MRE G++ V+ Y I R K+
Sbjct: 256 RSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+A L ++ + PN+VTY L+ G +
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKM 349
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 53/256 (20%)
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T + +++NA ++ +QA+ M+ G P S N L+ + + FD+A+ +F
Sbjct: 89 TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
K++V L +
Sbjct: 149 EL---KSKVVL---------------------------------------------DAYS 160
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ I++K CC Y VK L+ + GLSPN + +T LID C GNV A + M
Sbjct: 161 FGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMD 220
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P+ Y+ + + ++ F ++E MK I PN Y L+ S Y +
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI---SEYCNGG 277
Query: 636 EVQQCLAVYQDMWKAG 651
V + V+ +M + G
Sbjct: 278 MVDKAFKVFAEMREKG 293
>gi|297744686|emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 195/488 (39%), Gaps = 99/488 (20%)
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEF--RIVQLCVNKPDVNLAIRYACIVPRAD 221
RLL G + + L+E +E+ L ++D+ + + ++C ++ V A R+A ++P
Sbjct: 869 RLLSEGRLSDCIQLLEDMEKMGL--LDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPT 926
Query: 222 ILFCN--------------------FVREFGKKRD--LVSALRAYDASKKHLSS------ 253
+ N VRE G K D L + L + A + +
Sbjct: 927 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 986
Query: 254 --------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----N 301
PN++ +ID CG G K+ Y +RS+ V + VFN+L+
Sbjct: 987 EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG 1046
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A D F + + + D + L+KAC AG A+E+Y + KG ++
Sbjct: 1047 AVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEV 1106
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y+ V + W+ A V DM GV P+ + S+LI+ +AG ++ A +
Sbjct: 1107 ----YTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 1162
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+E G + L+ AC A + +A L+
Sbjct: 1163 QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDI---------------------- 1200
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
K PT +T N L+ A C KA+ +++M
Sbjct: 1201 -------------------------KSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDM 1235
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I+++IL+ A +++ L IL R+D ++P++V + +C+R R
Sbjct: 1236 KRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLR--RF 1293
Query: 600 KQAFSLFE 607
++A +L E
Sbjct: 1294 EKACALGE 1301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 154/347 (44%), Gaps = 39/347 (11%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A ++ V+ + LK D Y+T++ A +
Sbjct: 920 KLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVR----EAGLKADCKLYTTLISTCAKS 975
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++A V PN T+ +LI+ C AG V +A + M EP+
Sbjct: 976 GKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVF 1035
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDRISNMEHKD 486
N L+ AC ++ DRAF + + + + +G G DR +
Sbjct: 1036 NALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREV---- 1091
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
Y D+ ++ K T Y I + + D+ ++ +M G+
Sbjct: 1092 ---------------YKMIDQ-YNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGV 1135
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ + + LID G +G ++ A ++++ R G+ +V+Y++ + C +K ++A
Sbjct: 1136 VPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALE 1195
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ ++K ++ P + T L+ A ++++ + V DM +AG
Sbjct: 1196 LYVDIKSMKLNPTVSTMNALITALCEG---EQLEKAMEVLSDMKRAG 1239
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
+++ C ++ K+ +Y D++S + + N+L+ L+ +EV +M++
Sbjct: 1179 SLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRA 1238
Query: 319 GVMADMASYNILLKAC-------------------CLAGNTVLAQEIYGE-VKHLEAKGV 358
G+ + +Y+ILL A +A N V+ + + G ++ E
Sbjct: 1239 GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACA 1298
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
L V ++++ + D KW AL V + +SAGV P
Sbjct: 1299 LGEPVLSFNS-GRPQIDNKWTSSALMVYRETVSAGVIPT 1336
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 65/436 (14%)
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIY--------------------------VFNS 296
+D G+ M+ + +Y DL + N +N Y +N+
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+N + + V M +G+ + A++N +L C + A+ ++ E+
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ-- 357
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV+ D+ ++S+IV VF+ AL E M G+ P+T+ ++ LIN V
Sbjct: 358 -RGVVP-DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSKT 464
A+ + EM++ GC + N LL D A LF+ +TL T
Sbjct: 416 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL--T 473
Query: 465 QVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRFSFK---------- 512
+ G DGN T +S E +S+ P+ V N+ F K +
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSL--KPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531
Query: 513 -----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P+ +++IL+ C+ +A L +EM+ G+ P ++ +I +GN+
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A L M +G+ PD + Y T I V+ + +AF L M+ + PNLVTY +L
Sbjct: 592 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651
Query: 626 RARSRYGSLHEVQQCL 641
SR+G + E + L
Sbjct: 652 GGFSRHGRMQEAEMVL 667
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 174/408 (42%), Gaps = 60/408 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I F + V F + +L AL ++ K P+ I +I+ G C D
Sbjct: 360 VVPDL-ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN--GYCRNDDVS 416
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + ++ + +++ +N+L+N L E++K M + GV D + L+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++ E L + LK DV TY+T++ F + A ++ DM+S
Sbjct: 477 HGYCKDGNMTKALSLF-ETMTLRS---LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P+ I++S LIN + GLV +A L++EM + G +P CN +++ + R
Sbjct: 533 REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG------YLR 586
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A L ++ T ++ G VP
Sbjct: 587 AGNLSKANDFLNTMISEG---------------------------VP------------- 606
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ + + + R L+N M GL PN +++ ++ G ++ A
Sbjct: 607 -PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEM 665
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+L M + G++PD YT+ I V +K+AF + +EM P+
Sbjct: 666 VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 167/384 (43%), Gaps = 60/384 (15%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E LR + ++I N+L+ V + +VY++ K G + +
Sbjct: 164 YVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVN 223
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C G + + +E KGV D+ TY+T+V + A
Sbjct: 224 VYTLNIMVNALCKDGK---LDNVGVYLSEMEEKGVYA-DLVTYNTLVNAYCRRGLVSEAF 279
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ + M G+ P T+++LIN G E+A + +EML G PN+ N +L
Sbjct: 280 GLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML--- 336
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
VE+C+ + + +R+ N E + + P+ + +S
Sbjct: 337 VESCRKEDVWE---------------------AERVFN-EMLQRGVV---PDLI---SFS 368
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
S FS + R A +M+ VGL P+ + +TILI+ + +
Sbjct: 369 SIVGVFSRN--------------GELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V GAL++ M E G DVV Y T + R K L A LF+EM + P+ T T
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 624 LLRARSRYGSLHEVQQCLAVYQDM 647
L+ + G++ + L++++ M
Sbjct: 475 LIHGYCKDGNM---TKALSLFETM 495
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 175/423 (41%), Gaps = 58/423 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+K D+ A R ++ + P++ +I+ V G+ ++ A +E ++ + +
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ L+N D+ L++ M + G + D+ +YN LL C A E++
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF--- 457
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + +GV D +T +T++ + AL + E M + P+ +T+++L++
Sbjct: 458 KEMVERGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+A L+ +M+ P+ +IL+ AFRL W
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL---WD---------- 563
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
E K+K KPT T N ++K +
Sbjct: 564 ------------EMKEK----------------------GIKPTLVTCNTIIKGYLRAGN 589
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ +N M + G+ P+ I++ LI++ N + A ++ M E G+ P++V Y
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ R R+++A + +M I P+ TY +L+ Y S +++ V+ +M
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING---YVSKDNMKEAFRVHDEML 706
Query: 649 KAG 651
+ G
Sbjct: 707 QRG 709
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 31/260 (11%)
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + LI A + + F+ + + G + CN LL A V+ D A++++
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 459 ----------WTLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSH--- 501
+TL+ AL +D G D + S ME K + T N + N++
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKD--GKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 502 ------YSSFD--KRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISW 551
+ D KP TYN L+ C + Y R K +++EM VGL PN ++
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332
Query: 552 T-ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+L+++C +V A ++ M + G+ PD++++++ + V R+ L +A + FE+MK
Sbjct: 333 NPMLVESCRKE-DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 611 HYQIQPNLVTYITLLRARSR 630
+ P+ V Y L+ R
Sbjct: 392 GVGLVPDTVIYTILINGYCR 411
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 147/366 (40%), Gaps = 60/366 (16%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ VF+ L+ V A L+ E ++ ++K G + + N LL A G LA ++Y
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ K ++V+T + +V D K + + + E M GV + +T+++L+NA
Sbjct: 214 DF----VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSE-MEEKGVYADLVTYNTLVNA 268
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
GLV +A L + M G +P N L+ + ++ R+ + +
Sbjct: 269 YCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE------RAKRVLDEMLG 322
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC- 526
+G P T+N ++ C
Sbjct: 323 VG-----------------------------------------LCPNAATFNPMLVESCR 341
Query: 527 -TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D + + + NEM G+ P+ IS++ ++ +G + AL + M+ G+ PD V
Sbjct: 342 KEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI 401
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
YT I R+ + A + EM ++VTY TLL R L + + +++
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE---LFK 458
Query: 646 DMWKAG 651
+M + G
Sbjct: 459 EMVERG 464
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 257 YICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
YI +I+ + G C + S A ++++++ + + + N+++ + A +L +
Sbjct: 539 YISFSIL-INGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFL 597
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE----VKHLEAKGVLKLDVFTYST 368
M GV D +YN L+ N+ + +E + + ++E +G+L ++ TY+
Sbjct: 598 NTMISEGVPPDCITYNTLI-------NSFVKEENFDRAFFLINNMEERGLLP-NLVTYNA 649
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ F+ Q A V M+ G+ P+ T++SLIN + +++A + +EMLQ G
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Query: 429 CEPNSQ 434
P+ +
Sbjct: 710 FVPDDK 715
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 150/295 (50%), Gaps = 17/295 (5%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K + TY++++ A A W A+ + +DM A + P+ T++++INAC AG ++A+
Sbjct: 185 KPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALE 244
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L ++M + G P+ NI+L A Q+ +A F + ++VA +T +
Sbjct: 245 LCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFE--IMKSSKVA------PDTCTM 296
Query: 480 SNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALM 536
+ + H K + + NS ++R + P TY +M + C KA+
Sbjct: 297 NIVIHCLVKIGLYGEAIELFNSMR---ERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVF 353
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G+ PN +S+ L+ A G AL+ K+++++G+ PD+V+YT+ + RS
Sbjct: 354 DIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRS 413
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++A +F EM+ +PN V+Y L+ A YGS +++ +++ +M + G
Sbjct: 414 AQPEKAREVFNEMRKNACKPNKVSYNALIDA---YGSAGMLKEAISLLHEMEQDG 465
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 172/387 (44%), Gaps = 32/387 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ N +NSL++ +A ++ + + +MQ+ + +YN ++
Sbjct: 171 QARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVI 230
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC AGN A E+ K + GV D+ T++ ++ F + + A+ E M S
Sbjct: 231 NACGAAGNWKKALEL---CKKMTENGV-GPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNSQCCNILLQA---CVEA 446
+ V P+T T + +I+ GL +A+ LF M + C P+ ++ + C +A
Sbjct: 287 SKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQA 346
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
F + + + V+ N + H T +
Sbjct: 347 ENCKAVFDIMVAEGVRPNIVSY------NALLGAYASHGMHTEALETFKLL--------- 391
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K+ +P +Y L+ A KA + NEMR PN +S+ LIDA G +G +
Sbjct: 392 KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGML 451
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ +L M +DG+ PDV++ +T + C R K+L + + K IQ N V Y +
Sbjct: 452 KEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSG 511
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ Y SL + ++ L +Y M +AG
Sbjct: 512 I---GSYLSLGDYKKALVLYTSM-RAG 534
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 18/333 (5%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M GV ++ SYN LL A G A E + K L+ G L+ D+ +Y++++
Sbjct: 352 VFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETF---KLLKQNG-LRPDIVSYTSLL 407
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + A +V +M PN +++++LI+A +AG++++A+ L EM Q G +
Sbjct: 408 NAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQ 467
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ + LL AC Q + + + Q+ G +S ++K +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
Y+S + + KP TYNIL+ C V++L +M + +
Sbjct: 528 -----------YTSM-RAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK 575
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ +I + G + A M+E G PDV+ YTT IK ++A+ LF+E
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M++ QP+ + +L+ A ++ G V Q +
Sbjct: 636 MENNGTQPDAIVCSSLMEALNKGGQPERVLQLI 668
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 172/412 (41%), Gaps = 56/412 (13%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ D ++ P+ +I+ CG G++ K+ + + + V ++ N +++
Sbjct: 207 AINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLS 266
Query: 300 VNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ +++ + ++ M+ V D + NI++ G A E++ ++ E +
Sbjct: 267 AFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMR--ERRT 324
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
DV TY++I+ ++ + V + M++ GV PN +++++L+ A A+ G+ +A
Sbjct: 325 TCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEA 384
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ F+ + Q G P+ LL A + Q ++A +F
Sbjct: 385 LETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM------------------ 426
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--L 535
++ + KP +YN L+ A + +A L
Sbjct: 427 -----------------------------RKNACKPNKVSYNALIDAYGSAGMLKEAISL 457
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM G+ P+ IS + L+ ACG + IL + G+ + VAY + I +
Sbjct: 458 LHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLS 517
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
K+A L+ M+ ++P+ VTY L+ + G E L ++DM
Sbjct: 518 LGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVE---SLKFFEDM 566
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 147/379 (38%), Gaps = 78/379 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++ CG C K I +S+ + LN +NS + ++ D K L +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG---------------NTVLAQEIYGEV------ 350
Y +M+ V D +YNIL+ C G N L +E+Y V
Sbjct: 528 YTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVK 587
Query: 351 --KHLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K EA DV TY+T++K ++D W+ A + ++M + G P+ I
Sbjct: 588 QGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIV 647
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
SSL+ A G E+ + L E M Q + N + ++ +C + R W
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCT----------MLRDW- 696
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
KT + E D + IS + + + +F
Sbjct: 697 --KTASQIIEHLDSSLSSIS---------------------FGTLNHILNFLGKCGRTES 733
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+MK +Y+ ++ TVGLS ++TIL+ G +++L+ M + G+
Sbjct: 734 MMKL----FYK---MVTSCSTVGLS----TYTILLRNLLIVGKWRKYVEVLQWMEDAGVC 782
Query: 581 PDVVAYTTAIKVCVRSKRL 599
P + Y + + R +
Sbjct: 783 PTLYMYQSVLPYIWRDNSM 801
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+LI SG+++ A+ + + M+ ++ Y I++ R ++ QA LF EM+
Sbjct: 122 LLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQE 181
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLA--VYQDMWKAG 651
++ +PN TY +L+ A +R G Q C A + DM +A
Sbjct: 182 WRCKPNTDTYNSLIHAHARAG-----QWCWAINIMDDMQRAA 218
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 41/408 (10%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S+P++ T+I+ GD K+ + Y ++ + ++ ++ ++S++ + +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM + +YN +L C ++ +E G +K + + GV + DV TY+++
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYC---SSEQPKEAIGFLKKMRSDGV-EPDVVTYNSL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE------DYDGNTDRIS 480
P+ NIL+ A + + D A +F R L+ V G D +
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS-------FDKRFSFKP------------TTTTYNIL 521
E + + TPN + Y+S FDK + T +N +
Sbjct: 428 YFEQMIDEGL--TPNIIV---YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C + +++ L + M +G+ PN I+++ LID +G ++ A ++L M GM
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
PD V Y T I R R+ A +LF+EM + PN++TY +L+
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 183/428 (42%), Gaps = 40/428 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ +I + G + +E
Sbjct: 375 NILIC----AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +T NI V+ SL+ H L E+ M G+ + +N ++ +
Sbjct: 431 QMIDEGLTPNIIVYTSLI----HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + +++++ L + +K +V TYST++ + A A K+ M S G+
Sbjct: 487 CKEGRVIESEKLF----DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+++LIN ++ A+ LF+EM+ +G PN NI+LQ + A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ T S TQ+ L Y+ + D +++ N +
Sbjct: 603 LYVGITKSGTQLEL-STYNIILHGLCKNNLTD-EALRMFQNLCLT----------DLQLE 650
Query: 515 TTTYNI----LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T T+NI L+K D K L + GL PN+ ++ ++ + G G +E Q+
Sbjct: 651 TRTFNIMIGALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRA 627
M ++G + D ++ ++ + +A S+ +E KH+ ++ + + L +
Sbjct: 709 FFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLS 767
Query: 628 RSRYGSLH 635
+Y H
Sbjct: 768 GGKYQEYH 775
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 150/384 (39%), Gaps = 75/384 (19%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ CC AG L G V K +++ T++ ++K K A+ +
Sbjct: 94 IGCCCRAGRLDLGFAALGNV----VKKGFRVEAITFTPLLKGLCADKRTSDAMDI----- 144
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ M + C P+ C ILL+ + +
Sbjct: 145 -----------------------------VLRRMTELSCMPDVFSCTILLKGLCDENRSQ 175
Query: 451 RAFRLFRSWT-----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
A L +S T V G +G++D+ + H+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE-------------- 221
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
D+R S P TY+ ++ A C KA+ + M G+ PN +++ ++
Sbjct: 222 ----MLDRRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
S + A+ LK MR DG+ PDVV Y + + ++ R +A +F+ M ++P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+ TY TLL+ + G+L E+ L
Sbjct: 336 IATYCTLLQGYATKGALVEMHALL 359
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 131/343 (38%), Gaps = 53/343 (15%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M +L M D+ S ILLK C + A E+ + G DV +Y+T++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVI 203
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A +ML ++P+ +T+SS+I A +++AM + M++ G
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L + Q A + DG
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMR-----------SDG---------------- 296
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+P TYN LM C + +A + + M GL P+
Sbjct: 297 --------------------VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+ G + +L +M +G+ PD + I + +++ +A +F +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ + + PN+VTY ++ + GS V + ++ M G
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGS---VDDAMLYFEQMIDEG 436
>gi|359474892|ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 195/488 (39%), Gaps = 99/488 (20%)
Query: 164 RLLDSGEVEMFVGLMEVLEEFRLPVKELDEEF--RIVQLCVNKPDVNLAIRYACIVPRAD 221
RLL G + + L+E +E+ L ++D+ + + ++C ++ V A R+A ++P
Sbjct: 434 RLLSEGRLSDCIQLLEDMEKMGL--LDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPT 491
Query: 222 ILFCN--------------------FVREFGKKRD--LVSALRAYDASKKHLSS------ 253
+ N VRE G K D L + L + A + +
Sbjct: 492 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 551
Query: 254 --------PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----N 301
PN++ +ID CG G K+ Y +RS+ V + VFN+L+
Sbjct: 552 EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG 611
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A D F + + + D + L+KAC AG A+E+Y + KG ++
Sbjct: 612 AVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEV 671
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
Y+ V + W+ A V DM GV P+ + S+LI+ +AG ++ A +
Sbjct: 672 ----YTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 727
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+E G + L+ AC A + +A L+
Sbjct: 728 QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDI---------------------- 765
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
K PT +T N L+ A C KA+ +++M
Sbjct: 766 -------------------------KSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDM 800
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I+++IL+ A +++ L IL R+D ++P++V + +C+R R
Sbjct: 801 KRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLR--RF 858
Query: 600 KQAFSLFE 607
++A +L E
Sbjct: 859 EKACALGE 866
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 155/349 (44%), Gaps = 43/349 (12%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
KL ++++N+L+ C + ++ A ++ V+ + LK D Y+T++ A +
Sbjct: 485 KLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVR----EAGLKADCKLYTTLISTCAKS 540
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+V +M++A V PN T+ +LI+ C AG V +A + M EP+
Sbjct: 541 GKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVF 600
Query: 437 NILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGE-----DYDGNTDRISNM-EHK 485
N L+ AC ++ DRAF + + + + +G G DR + +
Sbjct: 601 NALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMI 660
Query: 486 DKQSITNTP---NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
D+ +I TP +SH D F++ ++ +M
Sbjct: 661 DQYNIKGTPEVYTIAVSSHSQIGDWEFAY----------------------SVYTDMTRK 698
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LID G +G ++ A ++++ R G+ +V+Y++ + C +K ++A
Sbjct: 699 GVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKA 758
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ ++K ++ P + T L+ A ++++ + V DM +AG
Sbjct: 759 LELYVDIKSMKLNPTVSTMNALITALCEG---EQLEKAMEVLSDMKRAG 804
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
+++ C ++ K+ +Y D++S + + N+L+ L+ +EV +M++
Sbjct: 744 SLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRA 803
Query: 319 GVMADMASYNILLKAC-------------------CLAGNTVLAQEIYGE-VKHLEAKGV 358
G+ + +Y+ILL A +A N V+ + + G ++ E
Sbjct: 804 GLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACA 863
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
L V ++++ + D KW AL V + +SAGV P
Sbjct: 864 LGEPVLSFNS-GRPQIDNKWTSSALMVYRETVSAGVIP 900
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 184/428 (42%), Gaps = 51/428 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLM-------NVNAHD 304
PN+ T+I G+C ++ S A LR Q + T N + +L+ NVN
Sbjct: 159 PNVVTYTTLIK--GLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI-A 215
Query: 305 LKFTLEVYKNMQKLGV--MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
LK E+ + + GV + +Y+I++ C G A+E++ E+K A+G++ D
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMK---AQGMIP-D 271
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V +YST++ F A W + + ++M+ GV P+ +T+S LI+ G V +A L E
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDG 474
M+Q G PN N L+ + A LF S +S T + G
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSF-------------------DKRFSFKPTT 515
N+ + + + +PN + Y + K + +
Sbjct: 392 KVKEAMNL-YNEMLQVGKSPNV---TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y I + C + + L NE+++ N +++ LID +G +E A ++ +
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ ++G+ PDVV Y I + ++ A LFE+M+ P+++ Y TLL
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567
Query: 634 LHEVQQCL 641
L EV + L
Sbjct: 568 LEEVIKLL 575
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 179/386 (46%), Gaps = 37/386 (9%)
Query: 245 DASKKHLS-SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-- 299
DAS+ ++ P + IID G+C G +++ ++E++++Q + ++ +++L++
Sbjct: 225 DASQYGVNCKPGVITYSIIID--GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + ++ M GV DM ++++L+ C G A+++ ++ + +G++
Sbjct: 283 CCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL---LEVMIQRGIV 339
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
++ TY++++ F A ++ M S G+ P+ I++++LIN V++AM+
Sbjct: 340 P-NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN 398
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG-- 474
L+ EMLQ G PN LL+ + + A +LF +++ +S G DG
Sbjct: 399 LYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLC 458
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
N ME ++ K ++FK Y+ L+ C
Sbjct: 459 KNDCLFEAMELFNEL------------------KSYNFKLNIENYSCLIDGLCKAGKLET 500
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L ++ GL P+ +++ I+I G V+ A + + M E+G +PD++AY T +
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLC 560
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPN 617
+L++ L +M + PN
Sbjct: 561 GFCEGNKLEEVIKLLHKMVQKDVSPN 586
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 162/384 (42%), Gaps = 61/384 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++Y ++R ++ +++ + L N N + + L + + G + ++ +Y
Sbjct: 107 YSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTT 166
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K C+ A ++ ++ L + TY T++K +ALK+ ++M
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTP----NAVTYGTLIKGLCQTGNVNIALKLHKEM 222
Query: 390 LSA----GVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
L+ GV P IT+S +I+ G ++A LFEEM G P+ + L+
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A ++D++ LF D D+
Sbjct: 283 CCAGKWDQSKHLF----------------DEMVDQ------------------------- 301
Query: 504 SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+P T+++L+ C + K L+ M G+ PN I++ LID
Sbjct: 302 ------GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G++ A ++ M G+ PD ++YTT I ++ ++K+A +L+ EM PN+ TY
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQ 645
TLL+ + G + + ++ V +
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMK 439
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 501 HYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
H+ R P +++N L+ A Y ++ +L NEMR GLSP+ + +IL +
Sbjct: 77 HFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCL 136
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V AL + + G P+VV YTT IK R+ +A LF M+ PN
Sbjct: 137 CNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNA 196
Query: 619 VTYITLLRARSRYGSLH 635
VTY TL++ + G+++
Sbjct: 197 VTYGTLIKGLCQTGNVN 213
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I + + + K + A+ Y+ + SPN+ T++ G ++ ++
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436
Query: 281 DLRSQNVTLNIYVFNSLMN-VNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+++ V+ N ++ ++ + +D F +E++ ++ ++ +Y+ L+ C AG
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E++ + L +G L+ DV TY+ ++ F A + E M G TP+
Sbjct: 497 KLETAWELF---EKLSQEG-LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
I +++L+ +E+ + L +M+Q PN+ C I++
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLN 290
+K + A + + K + S N I +D G+C + ++ ++ +L+S N LN
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD--GLCKNDCLFEAMELFNELKSYNFKLN 481
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I ++ L++ A L+ E+++ + + G+ D+ +YNI++ C G A ++
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF- 540
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ +E G D+ Y+T++ F + + +K+ M+ V+PN + + +++
Sbjct: 541 --EKMEENGCTP-DIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 32/357 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 56/334 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++TY LL G L ++ L +++D+ K+
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKS 467
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + NIY N ++N K F V + KLG D ++N L+K L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G E V + G + DV TY++IV + +AL + M V +
Sbjct: 172 GK---VSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+S++I++ G ++ A+ LF+EM G + + N L++ +A +++ L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL- 286
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
KD S PN + T
Sbjct: 287 ---------------------------KDMVSREIVPNVI-------------------T 300
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+L+ + L EM T G+SPN I++ L+D + A +L +M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ SPD+V +T+ IK KR+ +F + + N VTY L++ + G +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 636 EVQQCLAVYQDMWKAG 651
++ ++Q+M G
Sbjct: 421 LAEE---LFQEMVSHG 433
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 151/349 (43%), Gaps = 60/349 (17%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + M + P++VT+ +L++ Y + V + V++++ K G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRG 398
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 170/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-C-------ANAGL-------- 413
+ VF Q A ++ ++M++ G++PN IT+++L++ C AN L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 414 -------------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I V G C G + +++++ S V ++ + L++ + L+ LE+++++QK
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + Y +++ C G A ++ L KGV K +V TY+ ++
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFC---SLPCKGV-KPNVMTYTVMISGLCKKGS 523
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M G PN T+++LI A G + + L EEM G ++ +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 439 LLQACVEACQFDRAF 453
++ + + D++F
Sbjct: 584 VIDMLLSG-ELDKSF 597
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 41/408 (10%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S+P++ T+I+ GD K+ + Y ++ + ++ ++ ++S++ + +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM + +YN +L C ++ +E G +K + + GV + DV TY+++
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYC---SSEQPKEAIGFLKKMRSDGV-EPDVVTYNSL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P+ T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE------DYDGNTDRIS 480
P+ NIL+ A + + D A +F R L+ V G D +
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427
Query: 481 NMEHKDKQSITNTPNFVPNSHYSS-------FDKRFSFKP------------TTTTYNIL 521
E + + TPN + Y+S FDK + T +N +
Sbjct: 428 YFEQMIDEGL--TPNIIV---YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C + +++ L + M +G+ PN I+++ LID +G ++ A ++L M GM
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
PD V Y T I R R+ A +LF+EM + PN++TY +L+
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 167/393 (42%), Gaps = 50/393 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN +I+ G C AI + +RS V ++ +NSLM+ + + T
Sbjct: 264 PNCMTYNSILH--GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ +M K G+ D+A+Y LL+ G V E++ + + G+ D ++ +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALV---EMHALLDLMVRNGI-HPDHHVFNIL 377
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +A + A+ V M G+ PN +T+ ++I +G V+ AM FE+M+ G
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ + C FD+ W ++ + +E D+
Sbjct: 438 TPNIIVYTSLIHSL---CIFDK-------WDKAEELI---------------LEMLDRGI 472
Query: 490 ITNTPNF--VPNSHYSS---------FD--KRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
NT F + +SH FD R KP TY+ L+ C +A
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M +VG+ P+ +++ LI+ ++ AL + K M G+SP+++ Y ++
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++R A L+ + Q L TY +L
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 150/384 (39%), Gaps = 75/384 (19%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++E+L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 34 ARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ CC AG L G V K +++ T++ ++K K A+ +
Sbjct: 94 IGCCCRAGRLDLGFAALGNV----VKKGFRVEAITFTPLLKGLCADKRTSDAMDI----- 144
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ M + C P+ C ILL+ + +
Sbjct: 145 -----------------------------VLRRMTELSCMPDVFSCTILLKGLCDENRSQ 175
Query: 451 RAFRLFRSWT-----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
A L +S T V G +G++D+ + H+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE-------------- 221
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA 557
D+R S P TY+ ++ A C KA+ + M G+ PN +++ ++
Sbjct: 222 ----MLDRRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
S + A+ LK MR DG+ PDVV Y + + ++ R +A +F+ M ++P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+ TY TLL+ + G+L E+ L
Sbjct: 336 IATYCTLLQGYATKGALVEMHALL 359
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 131/343 (38%), Gaps = 53/343 (15%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M +L M D+ S ILLK C + A E+ + G DV +Y+T++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVI 203
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A +ML ++P+ +T+SS+I A +++AM + M++ G
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L + Q A + DG
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMR-----------SDG---------------- 296
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+P TYN LM C + +A + + M GL P+
Sbjct: 297 --------------------VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+ G + +L +M +G+ PD + I + +++ +A +F +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ + + PN+VTY ++ + GS V + ++ M G
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGS---VDDAMLYFEQMIDEG 436
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL C + K+ + A+ + ++H +PN+ +I + G + +E
Sbjct: 375 NILIC----AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF------TLEVYKNMQKLGVMADMASYNILLKAC 334
+ + +T NI V+ SL+ H L E+ M G+ + +N ++ +
Sbjct: 431 QMIDEGLTPNIIVYTSLI----HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G + +++++ L + +K +V TYST++ + A A K+ M S G+
Sbjct: 487 CKEGRVIESEKLF----DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+++LIN ++ A+ LF+EM+ +G PN NI+LQ + A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 455 LFRSWTLSKTQVAL 468
L+ T S TQ+ L
Sbjct: 603 LYVGITKSGTQLEL 616
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 108/216 (50%), Gaps = 6/216 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+PN+ + ++I I + K+ + ++ + + LN FNS+++ + + + + +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M ++GV ++ +Y+ L+ CLAG A ++ + + +K D TY+T++
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG----MKPDCVTYNTLI 553
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL + ++M+S+GV+PN IT++ ++ + A L+ + ++G +
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
NI+L + D A R+F++ L+ Q+
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 41/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + + K+ ++ + + +D + PN+ T+ID + G ++ +
Sbjct: 477 IFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSS 536
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S + + +N+L+N + L ++K M GV ++ +YNI+L+
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A+E+Y + K +L++ TY+ I+ AL++ +++ + T
Sbjct: 597 TAAAKELYVGI----TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652
Query: 400 TWSSLINACANAGLVEQAMHLFE-----------------------------------EM 424
T++ +I A G ++A LF M
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 712
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA 452
+ GC NS+ N +++ ++ RA
Sbjct: 713 EENGCTANSRMLNSIVRKLLQRGDITRA 740
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 33/426 (7%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT 308
KH P+ Y +I I G ++ + D+ + + ++ +N L L
Sbjct: 309 KHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAK-GFRLLGLI 367
Query: 309 LEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ +QK+ G ++ +Y +L+ C GN A ++Y K + + G +L + +
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY---KEMISHG-FQLSIIS 423
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++ ++ +A K+ +M + G+ P+ IT+S+LI+ G V+QA+ L+E+M
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
PNS +L E + +A F + LS + DG R +
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543
Query: 483 E----HKDKQSITNTPNFVP-NSHYSSF--DKRFS-------------FKPTTTTYNILM 522
E +K +P V NS F +++ S +P TY LM
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603
Query: 523 KACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + + L++EM+ + P HI++T++I ++ + Q+L+ M G++
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD V+Y T I+ +++ +++AF L+++M + ++P VTY L+ YG L +
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723
Query: 641 LAVYQD 646
L Q+
Sbjct: 724 LVSLQN 729
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 196/434 (45%), Gaps = 39/434 (8%)
Query: 226 NFVREFGKKRDLVSALR-------AYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSR 276
NF+ L+ LR Y+ K + + Y ++D G+C + +
Sbjct: 209 NFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVD--GLCRQSRFQDAV 266
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASYNILLK 332
++D + ++ FN++M+ L F ++V K+ M K G++ D SYNIL+
Sbjct: 267 LFFQDTEGKEFQPSVVSFNTIMSRYC-KLGF-VDVAKSFFCMMLKHGLLPDAYSYNILIH 324
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C+AG+ A ++ + +E G L+ D+ TY+ + K F A + + ML
Sbjct: 325 GLCIAGSMGEALDLKND---MENHG-LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIK 380
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN +T++ LI G VE+A+ L++EM+ G + + +LL + ++ Q D A
Sbjct: 381 GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVA 440
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFS 510
F+LF + L D + I + + + +Q+I N
Sbjct: 441 FKLFCEMEAN----GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN----------R 486
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P + + ++ C +A M + + T LS + I + I+ID GN A+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ K + E G+SP +V + + + +++L QA L + +K + ++PN VTY TL+
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606
Query: 629 SRYGSLHEVQQCLA 642
G++ + + L+
Sbjct: 607 CEEGNMQSLLELLS 620
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 151/354 (42%), Gaps = 74/354 (20%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
HD F L M+ L + + +YN LL ++ + ++Y E+K G +
Sbjct: 195 VHDALFVL---VKMKDLNFIVSIQTYNSLLYN---LRHSNIMWDVYNEIK---VSGTPQS 245
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ +T S +V +Q A+ +D P+ ++++++++ G V+ A F
Sbjct: 246 E-YTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304
Query: 422 EEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
ML+ G P++ NIL+ C+ ++GE D D
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAG--------------------SMGEALDLKND--- 341
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--- 537
ME+ +P TYNIL K +R+ L+N
Sbjct: 342 -MENH------------------------GLEPDMVTYNILAKG-----FRLLGLINGAW 371
Query: 538 ----EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+M G +PN +++T+LI GNVE AL++ K M G +++ T +
Sbjct: 372 NIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSL 431
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+S+++ AF LF EM+ ++P+L+TY TL+ + G EVQQ + +Y+ M
Sbjct: 432 CKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG---EVQQAILLYEKM 482
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 187/442 (42%), Gaps = 67/442 (15%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
R D++ + + K+ ++ A+ Y+ + PN I I+ G+C G ++
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL--MGLCEKGKISQA 510
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
R ++ L + N++L+I ++N +++ + + + +++YK + + G+ + ++N L+
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570
Query: 334 CCLAGNTVLAQEIYGEVK--HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C+ A+ + +K LE V TY+T++ V+ + Q L++ +M +
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAV------TYTTLMNVYCEEGNMQSLLELLSEMKA 624
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P IT++ +I ++++ L E+M G P+ N ++QA +A +
Sbjct: 625 KAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRK 684
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
AF+L+ DK + N
Sbjct: 685 AFQLY-----------------------------DKMLLHN------------------L 697
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+PT+ TYNIL+ C D L+ ++ ++ N ++T +I A G+V+ A+
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E G + Y+ I + + +A F M + P+ + LL A
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G L+ + LA +M K+G
Sbjct: 818 QCGHLNSEFELLA---EMIKSG 836
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 511 FKPTTTTYNILM-KACCTDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+P+ ++N +M + C + V K+ M GL P+ S+ ILI +G++ AL
Sbjct: 277 FQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEAL 336
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ M G+ PD+V Y K + A+++ ++M PNLVTY L+
Sbjct: 337 DLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGH 396
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V++ L +Y++M G
Sbjct: 397 CQIGN---VEEALKLYKEMISHG 416
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 171/396 (43%), Gaps = 32/396 (8%)
Query: 102 GNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELF---DGSGFK-- 156
GNV + A L EM++ G SI + ++G L K ++ VA +LF + +G +
Sbjct: 400 GNVEE-ALKLYKEMISHGFQLSIISSTV--LLGSLCKSRQVDVA-FKLFCEMEANGLRPD 455
Query: 157 ------LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLA 210
L+ C++ GEV+ + L E + R+ L ++ LC K ++ A
Sbjct: 456 LITYSTLIHGLCKQ----GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC-EKGKISQA 510
Query: 211 IRYACIVPRAD-----ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
Y + ++ IL+ + + K+ + A++ Y + SP + +++
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
I ++R + + ++ + N + +LMNV + ++ LE+ M+ +
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+Y +++K C QE ++ ++A G L D +Y+TI++ F A+ + A
Sbjct: 631 HITYTVVIKGLCKQWKL---QESCQLLEDMDAVG-LTPDQVSYNTIIQAFCKARDMRKAF 686
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + ML + P ++T++ LIN G ++ A +L + N +++A
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
D+A FR +V++ DY R+
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSI-RDYSAVIGRL 781
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+ +D K++ P I TI+ + G K+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + L +Y + L+ A ++ ++ NM K G D+ N L+ AG
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E++ L+ +V TY+T++K ++K W++ K+KE+
Sbjct: 351 LADAIKLFEEMESLQCTP----NVVTYNTVIKALFESKARASEAFLWYE---KMKEN--- 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV P++ T+S LI+ VE+A+ L EEM + G P L+ A +A +++
Sbjct: 401 -GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A LF+ L E+ ++ R+ ++H K + + N K+
Sbjct: 460 ANELFQE---------LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM-----KKL 505
Query: 510 SFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN LM + TD +L+ M G +P+ S I+++ +G +
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTD--EAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA+++ M+ + PDVV+Y T + R+ ++A L +EM + +L+TY ++L
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 626 RARSRYGSLH 635
A + H
Sbjct: 624 EAVGKIDEDH 633
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 194/463 (41%), Gaps = 41/463 (8%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R C++ AD+ V+ GK + + AL + K P ++I + G
Sbjct: 151 VRSTCVIGPADL--SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---KFTLEVYKNMQKLGVMADMASY 327
+ K +Y ++ ++ L V S + L + ++ M++ G+ Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+L G ++ G V+ ++ KG L V+TY+ ++K A + A +
Sbjct: 269 TTILGIYFKLGRV---EKALGLVQEMKEKGC-ALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G P+ + ++LIN AG + A+ LFEEM C PN N +++A E+
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDY------DG--NTDRISN----MEHKDKQSITNTPN 495
RA F + K + + DG T+R+ +E D++ P
Sbjct: 385 A--RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----------------NE 538
S ++ K ++ + L + C RV A+M NE
Sbjct: 443 -AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +G +P+ ++ L+ G + A +L+ M E+G +PD+ ++ + R+
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K A +F MK+ +I+P++V+Y T+L SR G E + +
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 162/411 (39%), Gaps = 62/411 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQK 317
I+ V G K+ +I+ ++ + +NS LM H+ E+Y M
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEK--VHELYNEMCN 222
Query: 318 LG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + D +Y+ L+ A G A ++ E+K K+ Y+TI+ ++
Sbjct: 223 EGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKI----YTTILGIYFKL 278
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ AL + ++M G T++ LI AG VE+A +F ML+ GC+P+
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLI 338
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ +A + A +LF ++ +S+ TPN
Sbjct: 339 NNLINLLGKAGRLADAIKLF----------------------------EEMESLQCTPNV 370
Query: 497 VPNSHYSSFDKRFSFK-------------------PTTTTYNILMKACCTDYYRVKALM- 536
V ++ + F K P++ TY+IL+ C KAL+
Sbjct: 371 V--TYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLL 428
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G +P ++ LI+A G + E A ++ + +RE+ Y IK +
Sbjct: 429 LEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGK 488
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
RL +A LF EMK P++ Y L+ R G E L ++
Sbjct: 489 CGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEE 539
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 49/310 (15%)
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+V H + VLK+DV + I + F KW + D + T+ +LI+
Sbjct: 88 KVDHRLVREVLKIDVEIHVKI-QFF---KWAGKRRNFEHD---------STTYMALIHCL 134
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG++ + +EM+++ C + +++ +A ++A +F K +
Sbjct: 135 DEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCK-PT 193
Query: 469 GEDYDGNTDRISNMEHKDK-----QSITNTPNFVP------------------NSHYSSF 505
Y+ + H +K + N + +P +S S F
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253
Query: 506 D--KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDA 557
D K PT Y ++ Y+++ L+ EM+ G + ++T LI
Sbjct: 254 DEMKENGLHPTAKIYTTILGI----YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKG 309
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +G VE A I M ++G PDVV I + ++ RL A LFEEM+ Q PN
Sbjct: 310 VGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPN 369
Query: 618 LVTYITLLRA 627
+VTY T+++A
Sbjct: 370 VVTYNTVIKA 379
>gi|428179291|gb|EKX48163.1| hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712]
Length = 557
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + +LI A G +E A M++ G P+ + N LLQACV A A L
Sbjct: 31 PSVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTL 90
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F S L + + G + I + ++ + + +R KP
Sbjct: 91 FSS--LRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM------RRAGCKPDQ 142
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY L+KAC + R + L+ EM +G+ PN S+ ++ A ++L+
Sbjct: 143 ITYTTLVKACVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQWGKATRLLQR 202
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M EDG+ ++++Y+ I CVR++R+K+A +LFEEM+ I PNL T++ + G
Sbjct: 203 MEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGM 262
Query: 634 LHEVQQCLAVYQDM 647
+ E Q + + QDM
Sbjct: 263 VDEAQGIMKLLQDM 276
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 53/353 (15%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ + +L+ L+ E M K G + N LL+AC AGN AQ ++
Sbjct: 32 SVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTLF 91
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ L+ +++ +V +A + + A K+ +M AG P+ IT+++L+ A
Sbjct: 92 SSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKPDQITYTTLVKA 151
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C AG ++A L EM + G PN+ N +L + Q+ +A RL
Sbjct: 152 CVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQWGKATRL------------ 199
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ ME ++ N + + +Y IL C
Sbjct: 200 -----------LQRMEEDGVEA-----NLL-----------------SYSYCIL---ACV 223
Query: 528 DYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
R+K AL EMR G+ PN ++ G V+ A I+K++++ + + +
Sbjct: 224 RARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGMVDEAQGIMKLLQDMRIKANAM 283
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+++ I+ + + +A + +M+ ++ ++V +L+A + G + E
Sbjct: 284 TFSSLIEAFINAGYADKAVEVKRKMEELGVEVDMVVSTQMLKAYTSMGKVEEA 336
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ ++ +G+ L +A + K +P++ + ++ C G+ ++ ++ LR
Sbjct: 36 YGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTLFSSLR 95
Query: 284 SQNVTLNIY----VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ +++ FN ++N A K ++ M++ G D +Y L+KAC A
Sbjct: 96 GAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKPDQITYTTLVKACVAA 155
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ + GE++ L + + ++Y+ I+ A W A ++ + M GV N
Sbjct: 156 GQFDRAERLLGEMEELG----IPPNAYSYNCILYGLAQKLQWGKATRLLQRMEEDGVEAN 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+++S I AC A +++A LFEEM + G PN N ++ D A
Sbjct: 212 LLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTMMSGYAAKGMVDEA 266
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 197 IVQLCVNKPDVNLA------IRYA--CI-VPRADILFCNFVREFGKKRDLVSALRAYDAS 247
++Q CV ++ A +R A CI + + F V + ++R + A +
Sbjct: 74 LLQACVRAGNLTAAQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM 133
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
++ P+ T++ C G + ++ + ++ + N Y +N ++ A L++
Sbjct: 134 RRAGCKPDQITYTTLVKACVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQW 193
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL------------ 353
+ + M++ GV A++ SY+ + AC A A ++ E++
Sbjct: 194 GKATRLLQRMEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIVPNLFVMNTM 253
Query: 354 -----------EAKGVLKL--------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
EA+G++KL + T+S++++ F +A + A++VK M GV
Sbjct: 254 MSGYAAKGMVDEAQGIMKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKMEELGV 313
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-NSQCCNILLQACVEACQFDRAF 453
+ + + ++ A + G VE+A+ EE+++ P +S+ + +L C + + A
Sbjct: 314 EVDMVVSTQMLKAYTSMGKVEEAIEKLEEIVKEASSPVSSRTFDSVLFQCSKRGSKEEAL 373
Query: 454 RLF 456
R+
Sbjct: 374 RVL 376
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTI 553
S++SS S +P+ Y L+KA Y ++ L +N M G +P+
Sbjct: 18 SYFSSSQHPPSLRPSVHCYGTLIKA----YGQLGQLEAAFETLNGMVKGGPAPSIRVINA 73
Query: 554 LIDACGGSGNVEGALQILKIMREDG----MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
L+ AC +GN+ A + +R G + P V++ + R +++++AF + EM
Sbjct: 74 LLQACVRAGNLTAAQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEM 133
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ +P+ +TY TL++A G ++ L +++
Sbjct: 134 RRAGCKPDQITYTTLVKACVAAGQFDRAERLLGEMEEL 171
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ + LI A G G +E A + L M + G +P + ++ CVR+ L A
Sbjct: 29 LRPSVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQ 88
Query: 604 SLFEEMKH----YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+LF ++ +QP V++ ++ A Y +V++ + +M +AG
Sbjct: 89 TLFSSLRGAGLCISLQPTGVSFNIMVNA---YARRRKVEKAFKMLLEMRRAG 137
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 27/335 (8%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG D SY L+ C G T A ++ ++ ++ K +++L+ Y+T++ K
Sbjct: 36 LGFHLDQVSYGTLIHGLCKVGETRAALDL---LQRVDGK-LVQLNAVMYNTVIYGMCKDK 91
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A + +M+S G++PN +T+S+LI+ G ++ A+ LF +++ +P+ N
Sbjct: 92 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 151
Query: 438 ILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL+ + + F + + V DG R+ E +SI NT
Sbjct: 152 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY--RLVK-EVNTAKSIFNTM 208
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
+ P +YNIL+ C KA L NEM + PN +++
Sbjct: 209 ------------AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 256
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID SG + ALQ++ M + G+ P+++ Y + I ++ ++ +A +L + K
Sbjct: 257 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 316
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
IQP++ TY L+ + G L + + +++D+
Sbjct: 317 GIQPSMYTYTILIDGLCKGGRLKDARN---IFEDL 348
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 149/352 (42%), Gaps = 59/352 (16%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
+ G+C G+ + + + + + V LN ++N+++ D + ++Y M G+
Sbjct: 49 IHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI 108
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +Y+ L+ + G A +++ ++ LE +K D +T++ +V F + +
Sbjct: 109 SPNVVTYSALISGFFVVGKLKDAIDLFNKII-LEN---IKPDGYTFNILVDGFCKDRKMK 164
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
V M+ G+ P+ +T++SL++ V A +F M Q G P+ + NIL+
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + D+A LF + N +PN
Sbjct: 225 NGFCKIKKVDKAMNLFNEM--------------------------------HCKNIIPN- 251
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDA 557
TYN L+ Y ++ L+++M G+ PN +++ +IDA
Sbjct: 252 --------------VVTYNSLIDGLSKSGRISYALQ-LVDQMHDRGVPPNILTYNSIIDA 296
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ V+ A+ ++ ++ G+ P + YT I + RLK A ++FE++
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SPN+ +I + G + ++ + +N+ + Y FN L++ D +K
Sbjct: 109 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 168
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G++ D+ +YN L+ L A+ I+ + A+G + D+ +Y+ ++
Sbjct: 169 VFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTM----AQGGVNPDIRSYNILI 224
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K A+ + +M + PN +T++SLI+ + +G + A+ L ++M G
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 284
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW 459
PN N ++ A + Q D+A L +
Sbjct: 285 PNILTYNSIIDALFKTHQVDKAIALITKF 313
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P T T N L+K C +A + +++ +G + +S+ LI G A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 568 LQILKIMREDG--MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L +L+ R DG + + V Y T I + K + AF L+ EM I PN+VTY L+
Sbjct: 62 LDLLQ--RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 119
Query: 626 RARSRYGSLHE 636
G L +
Sbjct: 120 SGFFVVGKLKD 130
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN ++ C D + A L +EM + G+SPN ++++ LI G ++ A+ + +
Sbjct: 80 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ + PD + + + +++K+ ++F M I P++VTY +L+ Y +
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDG---YRLVK 196
Query: 636 EVQQCLAVYQDMWKAG 651
EV +++ M + G
Sbjct: 197 EVNTAKSIFNTMAQGG 212
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 181/449 (40%), Gaps = 68/449 (15%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
AIR+A D + NF D LR PN+ +ID CG
Sbjct: 124 AIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKG 183
Query: 270 G-DYMKSRAIYEDLR------SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
G D+ ++ I++++ + + +I+ +N+L++ + ++ M + +
Sbjct: 184 GVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHI 243
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M ++ +Y+ ++ AG A ++ E+K + LD +Y+T++ ++A ++
Sbjct: 244 MPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF----ASIGLDRVSYNTLLSIYAKLGRFE 299
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V ++M S+G+ + +T+++L+ G E+ +FEEM PN + L+
Sbjct: 300 EALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLI 359
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + A +FR +
Sbjct: 360 DVYSKGGLYQEAMEVFREF----------------------------------------- 378
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
K+ K Y+ L+ A C + A+ ++EM G+ PN +++ +IDA
Sbjct: 379 ------KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAF 432
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK--RLKQA----FSLFEEMKHY 612
G SG VE A + +ED + A K C K R +Q ++F +M
Sbjct: 433 GRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHEL 492
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+PN+VT+ +L A SR S + L
Sbjct: 493 DIKPNVVTFSAILNACSRCNSFEDASMLL 521
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 37/308 (12%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+KH+ PN+ T+ID G ++ ++ +++ ++ L+ +N+L+++ A +F
Sbjct: 240 RKHIM-PNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRF 298
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V K M+ G+ D +YN LL G + ++ E+K A+ + ++ T
Sbjct: 299 EEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMK---AERIFP-NLLT 354
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST++ V++ +Q A++V + AG+ + + +S+LI+A GLVE A+ +EM
Sbjct: 355 YSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT 414
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------ 479
+ G PN N ++ A + + A T+ +G+ D +I
Sbjct: 415 KEGIRPNVVTYNSIIDAFGRSGIVEDA-----------TESEVGDKEDNQIIKIFGQLAA 463
Query: 480 -----SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRV 532
+ E++ +Q I H KP T++ ++ AC C +
Sbjct: 464 EKTCHAKKENRGRQEILCILAVFHKMH------ELDIKPNVVTFSAILNACSRCNSFEDA 517
Query: 533 KALMNEMR 540
L+ E+R
Sbjct: 518 SMLLEELR 525
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 191/416 (45%), Gaps = 41/416 (9%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD +K S N + + D G+ G+ ++SR + +I FN L++ A
Sbjct: 44 SYDYREKL--SRNALLNLKLDDAIGLFGEMVQSRPLP----------SIVEFNKLLSAIA 91
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + MQ L + D+ SYNIL+ C LA + G++ L +
Sbjct: 92 KMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--- 148
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ T S+++ + +K A+ + + M+ G P+T+T+++LI+ +A+ L
Sbjct: 149 -DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 207
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
++M+Q GC+P+ ++ + D A L + K + + Y+ D +
Sbjct: 208 VDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLC 266
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKAL 535
+H D ++ F+K + +P TYN L+ +C +Y R L
Sbjct: 267 KYKHID-------------DAFALFNKMETKGIRPDVFTYNSLI-SCLCNYGRWSDASRL 312
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++ M ++PN ++++ LIDA G + A ++ M + + PD+ Y++ I
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL +A +FE M PN+VTY TL++ + V++ + ++++M + G
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKG---FCKAKRVEEGMELFREMSQRG 425
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 174/406 (42%), Gaps = 59/406 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K+ D+ AL +K ++ I TIID G+C + A++ + ++ + +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIID--GLCKYKHIDDAFALFNKMETKGIRPD 289
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
++ +NSL++ N + NM + + ++ +++ L+ A G V A+++Y
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 350 EM----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-------- 457
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
DG VP P TY+IL+ C
Sbjct: 458 ---SDG----------------------VP--------------PDIITYSILLDGLCKY 478
Query: 529 YYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
TT I R ++A +LF EMK P+ Y TL+RAR R G
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 584
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 162/353 (45%), Gaps = 27/353 (7%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + + + +E KG+ + DV
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI---DDAFALFNKMETKGI-RPDV 290
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
FTY++++ + W A ++ +M+ + PN +T+S+LI+A G + +A L++E
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ + L+ + D A +F ++ + +D N + +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKDCFPNVVTYNTLI 402
Query: 484 H---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNE 538
K K+ F S T TYN L++ D + + +
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRG-------LVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + G+ P+ I+++IL+D G +E AL + + +++ M PD+ Y I+ ++ +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + LF + ++PN++ Y T++ R G E A++++M + G
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD---ALFREMKEDG 565
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 152/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ + LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 147/364 (40%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
P+++ ++I G + + + ++ + + N+ F++L++ + K ++
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 498 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I +T +I G E A + + M+EDG PD Y T I+ +R + L
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593
Query: 607 EEMK 610
+EM+
Sbjct: 594 KEMR 597
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 173/406 (42%), Gaps = 26/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 126 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 185
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 186 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 241
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 360
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 361 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 468
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + +Q N + ++ + ++V+ +++ M + G
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKG 511
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 38/423 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
FC +FGK L L Y K + PN+ T++D C + M +AI Y D
Sbjct: 210 FC----KFGK---LPIGLEFYREMKGNGLKPNVVSYSTLVDA--FCKEGMMQQAIKFYVD 260
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + N Y + SL++ N +L + M ++GV ++ +Y L+ C A
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+E++G+ ++ GV+ ++ +Y+ ++ F AK AL++ ++ G+ P+ +
Sbjct: 321 MKEAEELFGK---MDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 376
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
+ + I + +E A + EM + G + NS L+ A ++ L
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + T V DG ++K + N + N F +
Sbjct: 437 KELDIEVTVVTFCVLIDGLC------KNKLVSKAVDYFNRISND--------FGLQANAA 482
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ ++ C D +V+A L +M GL P+ ++T L+D GNV AL +
Sbjct: 483 IFTAMIDGLCKD-NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E GM D++AYT+ + +L++A S EEM I P+ V I++L+ G
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601
Query: 634 LHE 636
+ E
Sbjct: 602 IDE 604
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 182/437 (41%), Gaps = 32/437 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 142 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 201
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 262 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT-VGLSPNHISWTILIDACGGSGNV 564
+ T T+ +L+ C + KA+ N + GL N +T +ID V
Sbjct: 438 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 497
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A + + M + G+ PD AYT+ + + + +A +L ++M ++ +L+ Y +L
Sbjct: 498 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 557
Query: 625 LRARSRYGSLHEVQQCL 641
+ S L + + L
Sbjct: 558 VWGLSHCNQLQKARSFL 574
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 52/258 (20%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F K + G +PT
Sbjct: 118 F------KDMIGAGA-----------------------------------------RPTV 130
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 131 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ QQ + Y DM + G
Sbjct: 251 M---QQAIKFYVDMRRVG 265
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 261 TIIDVC----GICGDYMKSRAI-YEDLRSQNVTL--NIYVFNSLMNVNAHD--LKFTLEV 311
T++ C G+C + + S+A+ Y + S + L N +F ++++ D ++ +
Sbjct: 444 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 503
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G++ D +Y L+ GN + A + ++ + +KLD+ Y+++V
Sbjct: 504 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG----MKLDLLAYTSLVW 559
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Q A E+M+ G+ P+ + S++ G +++A+ L
Sbjct: 560 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 32/357 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 56/334 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++TY LL G L ++ L +++D+ K+
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKS 467
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 158/354 (44%), Gaps = 23/354 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQ 613
G++ + ++++ M+ G S D + I + + + KRL + L + K Q
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQ 609
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + NIY N ++N K F V + KLG D ++N L+K L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G E V + G + DV TY++IV + +AL + M V +
Sbjct: 172 GK---VSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+S++I++ G ++ A+ LF+EM G + + N L++ +A +++ L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL- 286
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
KD S PN + T
Sbjct: 287 ---------------------------KDMVSREIVPNVI-------------------T 300
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+L+ + L EM T G+SPN I++ L+D + A +L +M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ SPD+V +T+ IK KR+ +F + + N VTY L++ + G +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 636 EVQQCLAVYQDMWKAG 651
++ ++Q+M G
Sbjct: 421 LAEE---LFQEMVSHG 433
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 151/349 (43%), Gaps = 60/349 (17%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + M + P++VT+ +L++ Y + V + V++++ K G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRG 398
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I V G C G + +++++ S V ++ + L++ + L+ LE+++++QK
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + Y +++ C G A ++ L KGV K +V TY+ ++
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFC---SLPCKGV-KPNVMTYTVMISGLCKKGS 523
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M G PN T+++LI A G + + L EEM G ++ +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 439 LLQACVEACQFDRAFRLFRSWTLSK 463
++ + A + RL + LSK
Sbjct: 584 VIDMLLSAMK-----RLTLRYCLSK 603
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 20/321 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ D+ +YN L+ G LA E+ ++ + KG K +V++Y+ +V F
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEV---LRDMRNKGC-KPNVYSYTILVDGFCKLGK 433
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +M + G+ PNT+ ++ LI+A + +A+ +F EM + GC+P+ N
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPNFV 497
L+ E + A L R +S+ VA Y+ + + E K+ + + N F
Sbjct: 494 LISGLCEVDEIKHALWLLRD-MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF- 551
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILI 555
S D+ TYN L+K C + + ++L +M GL P+ IS ILI
Sbjct: 552 ---QGSLLDE--------ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ SG VE A++ K M G +PD+V + + I R+ R++ ++F +++ I
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660
Query: 616 PNLVTYITLLRARSRYGSLHE 636
P+ VTY TL+ + G +++
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYD 681
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 132/314 (42%), Gaps = 31/314 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K AL V DM G PN++ + +LI++ + V +A+ L E
Sbjct: 211 LFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 270
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N + C+FDR R F ++ + G
Sbjct: 271 EMFLMGCVPDAETFN---DVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327
Query: 472 YDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G D ++ + K I NT +H D + T+Y I+ C +
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387
Query: 529 Y----YRVKAL-------MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y K L + +MR G PN S+TIL+D G ++ A +L M D
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S + E+
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVDEI 504
Query: 638 QQCLAVYQDMWKAG 651
+ L + +DM G
Sbjct: 505 KHALWLLRDMISEG 518
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 161/418 (38%), Gaps = 63/418 (15%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS-L 297
SAL KH PN I +T+I C ++ + E++ + FN +
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288
Query: 298 MNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + D + ++ M G D +Y L+ C G A++++ +
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----- 343
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVE 415
K ++T++ F A V DM+++ G+ P+ T++SLI GLV
Sbjct: 344 ---KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A+ + +M GC+PN IL+ + + D A+ L + DG
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA-----------DG- 448
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
KP T +N L+ A C ++ +A
Sbjct: 449 -----------------------------------LKPNTVGFNCLISAFCKEHRIPEAV 473
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ EM G P+ ++ LI ++ AL +L+ M +G+ + V Y T I
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 533
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R +K+A L EM + +TY +L++ R G EV + ++++ M + G
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG---EVDKARSLFEKMLRDG 588
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 165/395 (41%), Gaps = 32/395 (8%)
Query: 245 DASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL-RSQNVTLNIYVFNSLMNV 300
DA+K + P I T+I G ++A+ D+ S + ++ +NSL+
Sbjct: 333 DAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ LEV ++M+ G ++ SY IL+ C G E Y + + A G
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI---DEAYNLLNEMSADG- 448
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
LK + ++ ++ F A+++ +M G P+ T++SLI+ ++ A+
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED--YDGNT 476
L +M+ G N+ N L+ A + + A +L Q +L ++ Y+
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF---QGSLLDEITYNSLI 565
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA 534
+ DK S F+K R P++ + NIL+ C +A
Sbjct: 566 KGLCRAGEVDKAR-------------SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ EM G +P+ +++ LI+ +G +E L + + ++ +G+ PD V Y T +
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + A L +E PN T+ LL++
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 164/427 (38%), Gaps = 41/427 (9%)
Query: 233 KKRDLVSALRAYD-------ASKKHLSSPNMYICRTI---------IDVCGICGDYMKSR 276
K+ +S +R YD ++ L N+Y C I V G C + +
Sbjct: 139 KESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNC--HKVAA 196
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++ D+ S+ + ++ F +M +++ L V ++M K G + + Y L+ +
Sbjct: 197 NVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSL 256
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A ++ E+ + G + D T++ ++ A K+ ML G
Sbjct: 257 SKCNRVNEALQLLEEMFLM---GCVP-DAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 312
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ IT+ L+N G V+ A LF + + P S N L+ V + D A
Sbjct: 313 TPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKA 368
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ S V Y+ S + K+ + V + KP
Sbjct: 369 VLSDMVTSYGIVPDVCTYN------SLIYGYWKKGLVGLALEVLRDMRNK-----GCKPN 417
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y IL+ C L+NEM GL PN + + LI A + A++I +
Sbjct: 418 VYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 477
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M G PDV + + I +K A L +M + N VTY TL+ A R G
Sbjct: 478 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 537
Query: 633 SLHEVQQ 639
+ E ++
Sbjct: 538 EIKEARK 544
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 513
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G + D +YN L+K C AG
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGE 573
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 574 VDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 633
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 634 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDG 693
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ V DR
Sbjct: 694 FVPNDRTWSILLQSLVPQETLDR 716
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 32/357 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 242 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 358 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 399
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 179/393 (45%), Gaps = 36/393 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 181 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 294
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ VF Q A ++ ++M++ G++PN IT+++L++ + +A ++ + M++ C
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNME 483
P+ L++ + D ++FR+ + + VA Y + +I E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS-KRGLVANAVTYSILVQGFCQSGKIKLAE 413
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++ P TY IL+ C + KAL +++
Sbjct: 414 ELFQEMVSH-----------------GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ + +T +I+ G VE A + + G+ P+V+ YT I + L +
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
A L +M+ PN TY TL+RA R G L
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 56/338 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLC 229
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 289
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N+LL V+ + A L+ K+ IT
Sbjct: 290 TFNVLLDVFVKEGKLQEANELY------------------------------KEMITR-- 317
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
P TYN LM C +A +++ M SP+ +++T
Sbjct: 318 ---------------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 362
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM +
Sbjct: 363 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 422
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ P+++TY LL G L ++ L +++D+ K+
Sbjct: 423 GVLPDVMTYGILLDGLCDNGKL---EKALEIFEDLQKS 457
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 159/356 (44%), Gaps = 23/356 (6%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
V G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F L K+++ LG T I M K + + N
Sbjct: 436 DGLCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL---- 485
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
+ S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 486 -FCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQ 613
G++ + ++++ M+ G S D + I + + + KRL + L + K Q
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQ 599
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + NIY N ++N K F V + KLG D ++N L+K L
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G E V + G + DV TY++IV + +AL + M V +
Sbjct: 162 GK---VSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+S++I++ G ++ A+ LF+EM G + + N L++ +A +++ L
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL- 276
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
KD S PN + T
Sbjct: 277 ---------------------------KDMVSREIVPNVI-------------------T 290
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+L+ + L EM T G+SPN I++ L+D + A +L +M
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ SPD+V +T+ IK KR+ +F + + N VTY L++ + G +
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 410
Query: 636 EVQQCLAVYQDMWKAG 651
++ ++Q+M G
Sbjct: 411 LAEE---LFQEMVSHG 423
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 150/349 (42%), Gaps = 60/349 (17%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 96 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 151
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + + V + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 152 NTLIKGLFLEGKVSEAVVLV-DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 246
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 247 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + M + P++VT+ +L++ Y + V + V++++ K G
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRG 388
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 92/343 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 345
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 346 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 405
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G LA+E++ E + + GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 406 SGKIKLAEELFQE---MVSHGVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------LC 509
Query: 457 RSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ +LS+ + L + + DGN P
Sbjct: 510 KKGSLSEANILLRKMEEDGNA------------------------------------PND 533
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
TYN L++A D + L+ EM++ G S + S ++ID
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 188/415 (45%), Gaps = 34/415 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y ++ SPN+ +I + G+ G + + +++DLRS ++ +N+L+
Sbjct: 379 AALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLL 438
Query: 299 NV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
V N D + + V+K M+K G + + +Y L+ + G A EIY K +
Sbjct: 439 AVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIY---KRMIE 494
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G+ D+ TY+ ++ A W A K+ +M P+ +++SSL++A ANA ++
Sbjct: 495 AGIYP-DISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLD 553
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILL---QACVEACQFDRAFRLFRSWTLS---KTQVALG 469
+ L E++ EP++ L+ + ++AF+ R S A+
Sbjct: 554 KMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMV 613
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCT 527
Y N M K ++ +T K S + TYN LM +
Sbjct: 614 SIYGKN-----KMVKKVEEVLT-------------LMKENSINHSAATYNSLMHMYSRLG 655
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D + +A++ E+++ G+ P+ S+ +I A G G ++ A ++ M+ G+ PD+V Y
Sbjct: 656 DCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYN 715
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
IK V + ++A L + +PN TY ++L R+G + E + L+
Sbjct: 716 IFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLS 770
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 169/371 (45%), Gaps = 31/371 (8%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L + NV L++Y S M+V K + + +M++ G+ D +YN L+ C G
Sbjct: 220 LVTYNVVLHVY---SKMSV---PWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYR 273
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E+K A G + D T+++++ V+ A+ + A+ V + M +AG TP+ +T+
Sbjct: 274 EAAQMFDEMK---AAG-FEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTY 329
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SLI+A GL+E+A+ L +EM G +P+ L+ + D A +
Sbjct: 330 NSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVR 389
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYN 519
+ L + + M H + T FD + + P T+N
Sbjct: 390 NGCSPNLC-----TYNALIKM-HGVRGKFTEM--------MIVFDDLRSAGYVPDVVTWN 435
Query: 520 ILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + V + EM+ G P ++ LI + G + A++I K M E
Sbjct: 436 TLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 495
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD+ Y + R R QA LF EM+ +P+ ++Y +LL A Y + ++
Sbjct: 496 GIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHA---YANAKKL 552
Query: 638 QQCLAVYQDMW 648
+ A+ +D++
Sbjct: 553 DKMKALSEDIY 563
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 183/457 (40%), Gaps = 80/457 (17%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + +D K P+ +++DV G + ++ + + + + T ++ +NSL++
Sbjct: 275 AAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLIS 334
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV------- 350
D L+ LE+ + M+ G+ D+ +Y L+ G A Y E+
Sbjct: 335 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSP 394
Query: 351 -------------------------KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
L + G + DV T++T++ VF V
Sbjct: 395 NLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVP-DVVTWNTLLAVFGQNGLDSEVSGV 453
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M AG P T+ SLI++ + GL +QAM +++ M++AG P+ N +L A
Sbjct: 454 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 513
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS---------NMEHKDKQSITNTPNF 496
++ +A +LF A ED D D +S N + DK + +
Sbjct: 514 GGRWVQAEKLF----------AEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIY 563
Query: 497 VPNSHYSSF---------DKRFSFKPTTTTYNILMKACCT----------DYY------- 530
++ +K S T + L + C+ Y
Sbjct: 564 AQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 623
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+V+ ++ M+ ++ + ++ L+ G+ E IL ++ GM PD +Y T I
Sbjct: 624 KVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVI 683
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R ++K+A LF EMK ++P++VTY +++
Sbjct: 684 YAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 720
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Query: 517 TYNILMKACCT--DYYRVKALM-NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ +CC YR A M +EM+ G P+ +++ L+D G + E A+ +LK
Sbjct: 258 TYNTLI-SCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKK 316
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G +P VV Y + I V+ L++A L +EM+ ++P++VTY TL+ R G
Sbjct: 317 MENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIG- 375
Query: 634 LHEVQQCLAVYQDMWKAG 651
++ LA Y +M + G
Sbjct: 376 --KIDAALATYSEMVRNG 391
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 164/389 (42%), Gaps = 51/389 (13%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
+ Y T+I C G Y ++ +++++++ + FNSL++V A + + V
Sbjct: 255 DRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVL 314
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M+ G + +YN L+ A G L +E + +E +G +K DV TY+T++
Sbjct: 315 KKMENAGCTPSVVTYNSLISAYVKDG---LLEEALELKQEMEFRG-MKPDVVTYTTLISG 370
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
AL +M+ G +PN T+++LI G + M +F+++ AG P+
Sbjct: 371 LDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPD 430
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL G+ +G +S + + K++
Sbjct: 431 VVTWNTLL-------------------------AVFGQ--NGLDSEVSGVFKEMKKA--- 460
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
++P +R ++ ++Y + C + + + M G+ P+ ++
Sbjct: 461 --GYIP--------ERDTYVSLISSY-----SRCGLFDQAMEIYKRMIEAGIYPDISTYN 505
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ A G A ++ M + PD ++Y++ + +K+L + +L E++
Sbjct: 506 AVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQ 565
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+I+P+ TL+ ++ SL E ++
Sbjct: 566 RIEPHNWLVKTLVLVNNKVNSLSETEKAF 594
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 53/293 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQAMHL 420
D Y+ +V F+ A ++ A+ V M+ GV P +T++ +++ + + ++ + L
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G E + N L+ C + A ++F
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEM--------------------- 282
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
K F+P T+N L+ +A+ + +
Sbjct: 283 --------------------------KAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKK 316
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G +P+ +++ LI A G +E AL++ + M GM PDVV YTT I R +
Sbjct: 317 MENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGK 376
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A + + EM PNL TY L++ G E+ + V+ D+ AG
Sbjct: 377 IDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEM---MIVFDDLRSAG 426
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 195/476 (40%), Gaps = 68/476 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P +D L F+ + L A A+ + P++ C ++ G +R
Sbjct: 147 TPSSDFLIHTFITSPAQG-SLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAR 205
Query: 277 AIYEDLR-SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+++++R S+NV LN Y + +++ A + E+ + + G+ + +YN+L+ A
Sbjct: 206 EVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDA 265
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +G A + G ++ +G + V T+ ++ A + + V ++M G
Sbjct: 266 LCKSGRVEEAFRLKGRME----QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLG 321
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V+PN + ++ LI G QA+ LF+EM+ +P + N++ +A + + +RA
Sbjct: 322 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAE 381
Query: 454 RLFR------------------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--- 492
R+ +W L +T+ R+ ++ SITN
Sbjct: 382 RILEDMLSIGMTVHCGLFNTVVAWLLQRTR------------RLESV-----VSITNEMV 424
Query: 493 TPNFVPNS---------------HYSSFDKRF-----SFKPTTTTYNILMKACCTDYYRV 532
T PN H + F T N L+ C Y
Sbjct: 425 TRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMK 484
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+A ++ M G+ + I++ I+I C +E A+++ M G PD+ + T +
Sbjct: 485 EATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 544
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++++ F L ++MK +QP++V+Y T++ + + + ++ L D
Sbjct: 545 HAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD 600
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 194/446 (43%), Gaps = 44/446 (9%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++++ + +K ALR +D P I G+ ++ I E
Sbjct: 326 EVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILE 385
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ S +T++ +FN+++ A L+ T LE ++ V M + L+ AC
Sbjct: 386 DMLSIGMTVHCGLFNTVV---AWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTAC---- 438
Query: 339 NTVLAQEIYGEVKHLEAKGV--------LKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+E+ KH EA G+ L +++ T + ++ + K+ + A KV + ML
Sbjct: 439 ----MRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTML 494
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G+ ++IT++ +I C +E+A+ L +M + G +P+ N LL A + +
Sbjct: 495 NKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKME 554
Query: 451 RAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F L ++ L V+ G DG H + I ++ D+
Sbjct: 555 ETFHLLDQMKTEGLQPDIVSYGTIIDG---------HCKAKDIRKAKEYLTEL----MDR 601
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
KP YN L+ + A+ + M++ G+ P ++++ L+ +G VE
Sbjct: 602 --GLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A I RE+ + V+ YT I+ + ++ +A + FEEM+ I PN +TY TL+
Sbjct: 660 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 719
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
A S+ G+ E + ++ +M +G
Sbjct: 720 YAYSKSGNSEEASK---LFDEMVGSG 742
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDG 474
+A F + G P+ + CN L+A V A Q D A +F S+ VAL E Y
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESR-NVALNEYSYTA 226
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK-----RFSFKPTTTTYNILMKACCT-- 527
+ D + F+ R +PT TYN+LM A C
Sbjct: 227 MIKALCKAGKVD----------------AGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 270
Query: 528 ---DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +R+K M + G++P+ +++ ILI+ +L+ M + G+SP+ V
Sbjct: 271 RVEEAFRLKGRMEQG---GMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEV 327
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y I R QA LF+EM +++P VTY + +A + G + ++ L
Sbjct: 328 IYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL--- 384
Query: 645 QDMWKAG 651
+DM G
Sbjct: 385 EDMLSIG 391
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+CN GK + L D K P++ TIID D K++ +L
Sbjct: 547 YCNL----GKMEETFHLL---DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + N++++N+L+ D+ ++ + M+ G+ +Y L+ C AG
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ I+ + + + + L V Y+ +++ + A+ E+M S G++PN +T+
Sbjct: 660 EAKTIFSQAR----ENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTY 715
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
++L+ A + +G E+A LF+EM+ +G P++ L+ C E D+
Sbjct: 716 TTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDK 765
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN++I +I G GD + E ++S + + SLM H ++ +
Sbjct: 605 PNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 664
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ V + Y I+++ C G V A + E++ ++G+ + TY+T++
Sbjct: 665 FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMR---SRGI-SPNKLTYTTLMY 720
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + + A K+ ++M+ +GV P+ IT+ +LI C+ +++ + E+
Sbjct: 721 AYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTK 780
Query: 432 NSQCCNIL 439
+ + NIL
Sbjct: 781 DDRMYNIL 788
>gi|297798436|ref|XP_002867102.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297312938|gb|EFH43361.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1094
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 148/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 541 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 600
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D + L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 601 AEMKAETHPIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 656
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 657 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 716
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+ L K
Sbjct: 717 LGTVSYSSLMGACCNAKDWKKALELYEKIKLIK--------------------------- 749
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
+PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 750 --------------------LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 789
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L +EDG+SP+ + +C R
Sbjct: 790 ITYSMLMLASERKDDFEVSFKLLSQAKEDGISPNFIMCRCITSLCKR 836
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 453 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 512
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 513 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 568
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 569 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHITIGALMKACCNAG 628
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 629 QVERAKEVYQ------------------------MIHK---------------------- 642
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 643 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 701
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ V+Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 702 EAFGILQDAKSQGIRLGTVSYSSLMGACCNAKDWKKALELYEKIKLIKLRPTISTMNALI 761
Query: 626 RA 627
A
Sbjct: 762 TA 763
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +L + T++ ++ V A ++ + A V + +G+T + +++LI++CA +G V+
Sbjct: 465 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 524
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+F +M +G E N L+ C A Q +AF +
Sbjct: 525 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY------------------- 565
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
I + N KP +N L+ AC R
Sbjct: 566 -------------GILRSKNV---------------KPDRVVFNALISACGQSGAVDRAF 597
Query: 534 ALMNEMR--TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ EM+ T + P+HI+ L+ AC +G VE A ++ +++ + G+ YT A+
Sbjct: 598 DVLAEMKAETHPIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 657
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C +S A S++++MK + P+ V + L+ G + + + QD G
Sbjct: 658 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFGILQDAKSQG 714
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 595 RAFDVLAEMKAETHPIDPDHITIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 654
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 655 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 711
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + + P T ++LI A +
Sbjct: 712 SQGI-RLGTVSYSSLMGACCNAKDWKKALELYEKIKLIKLRPTISTMNALITALCEGNQL 770
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 771 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 812
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 191/431 (44%), Gaps = 52/431 (12%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+C R+ NF+ E GK ++ S + P++ T++ + +
Sbjct: 9 SCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHK---PSLISYTTLLAALTMQKRFD 65
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+I + + + FN+++N + +++ +E + MQ+ G+ ++YN L+
Sbjct: 66 SIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLI 125
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K +AG +E ++ + +G +K ++ TY+ +V+ + + K A V M++
Sbjct: 126 KGYGIAGK---PEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIA 182
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ P+ +T++++ A A G ++QA + EM G +PN + C I++ + +
Sbjct: 183 SGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242
Query: 452 AFR---------------LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
A R +F S L K VA+ D DG + ++ ME
Sbjct: 243 ALRFAYRMKELGIHPNLVIFNS--LIKGFVAI-MDRDGVDEVLNLMEE------------ 287
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
F KP T++ +M A T + + + + ++M G+ P+ +++IL
Sbjct: 288 ------------FGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSIL 335
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ E A ++L M + G P+VV +TT I + ++ A +F++M I
Sbjct: 336 AKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGI 395
Query: 615 QPNLVTYITLL 625
PNL T+ TL+
Sbjct: 396 SPNLKTFETLI 406
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 265 VCGIC-GDYMKSRAIYEDLR------SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
CGI Y K I E LR + N+ +FNSL+ V D EV M
Sbjct: 226 TCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLM 285
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV D+ +++ ++ A AG +EI+ ++ K ++ D YS + K +
Sbjct: 286 EEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDM----VKAGIEPDAHAYSILAKGYVR 341
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ + A ++ M+ +G PN + ++++I+ +AG ++ A+ +F++M Q G PN +
Sbjct: 342 AQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKT 401
Query: 436 CNILLQACVEACQ 448
L+ EA Q
Sbjct: 402 FETLIWGFAEARQ 414
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 192 DEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
+E ++++L + +V +R ++ RA +CN KKR A++ K +
Sbjct: 135 EESVKLLELMSQEGNVKPNLRTYNVLVRA---WCN------KKR----ITEAWNVVYKMI 181
Query: 252 SS---PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LK 306
+S P++ TI G ++ + ++++ V N +M+ + ++
Sbjct: 182 ASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIR 241
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L M++LG+ ++ +N L+K ++ ++ EV +L + +K DV T+
Sbjct: 242 EALRFAYRMKELGIHPNLVIFNSLIKGFV----AIMDRDGVDEVLNLMEEFGVKPDVITF 297
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
STI+ ++ A + + ++ +DM+ AG+ P+ +S L A E+A L M++
Sbjct: 298 STIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIK 357
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+G +PN ++ A + D A R+F
Sbjct: 358 SGFQPNVVIFTTVISGWCSAGKMDYAVRVF 387
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 21/297 (7%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY ++ A W+ A+ + +DML A + P+ T+++LINAC ++G QA+
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALE 234
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ ++M G P+ NI+L A Q+ +A F ++ G +T
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF--------ELMKGAKVRPDTTTF 286
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKA 534
+ + + K QS F S DKR +P T+ +M + + +A
Sbjct: 287 NIIIYCLSKLGQSSQALDVF-----NSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRA 341
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ M GL PN +S+ L+ A G E AL + ++ +G+ PDVV+YT+ +
Sbjct: 342 VFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYG 401
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS++ +A +F M+ + +PN+VTY L+ A YGS + + + +++ M + G
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA---YGSNGFLAEAVEIFRQMEQDG 455
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 181/418 (43%), Gaps = 40/418 (9%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIY 292
R AL ++ K P+ II G ++ ++ +R + ++
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVV 321
Query: 293 VFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
F S+M++ + ++ +E V++ M G+ ++ SYN L+ A + G + A ++G
Sbjct: 322 TFTSIMHL--YSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFG 379
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++K G++ DV +Y++++ + ++ A +V M PN +T+++LI+A
Sbjct: 380 DIKR---NGIVP-DVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ G + +A+ +F +M Q G +PN LL AC + SK +V +
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAAC----------------SRSKKKVNV 479
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-------YSSFDKRFSFKPTTTTYNIL 521
R N+ S + ++ + Y + K+ K + T+ IL
Sbjct: 480 ETVLSAAQSRGINLNTAAYNSAIGS--YINAAELEKAIALYQTMRKK-KVKADSVTFTIL 536
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + Y + + EM + + ++ ++ A G V A I M+ G
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PDV+AYT+ + S++ +A LF EM+ I+P+ + L+RA ++ G V
Sbjct: 597 KPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 172/399 (43%), Gaps = 53/399 (13%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 210 APSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ V D ++NI++ G + A +++ ++ A+ + DV T+++I+
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAE--CRPDVVTFTSIM 327
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+++ + V E ML+ G+ PN +++++L+ A A G+ E A+ +F ++ + G
Sbjct: 328 HLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIV 387
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ LL + + Q +A +F M K+++
Sbjct: 388 PDVVSYTSLLNSYGRSRQPGKAKEVFL------------------------MMRKERR-- 421
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
KP TYN L+ A ++ + +A + +M G PN
Sbjct: 422 ---------------------KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNV 460
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S L+ AC S +L + G++ + AY +AI + + L++A +L++
Sbjct: 461 VSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQT 520
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ +++ + VT+ L+ R E L +D+
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 164/383 (42%), Gaps = 27/383 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + + +++L+N + A ++ + + +M + + ++YN L+
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC +GN A E+ K + GV D+ T++ ++ + + + AL E M
Sbjct: 221 NACGSSGNWRQALEV---CKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEML--QAGCEPNSQCCNILLQACVEACQF 449
A V P+T T++ +I + G QA+ +F M +A C P+ ++ +
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEI 336
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-KR 508
+ +F + L E N + + N+ D KR
Sbjct: 337 ENCRAVF--------EAMLAEGLKPNI-----VSYNALMGAYAVHGMSENALSVFGDIKR 383
Query: 509 FSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y L+ + + K + MR PN +++ LIDA G +G +
Sbjct: 384 NGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A++I + M +DG P+VV+ T + C RSK+ ++ + I N Y +
Sbjct: 444 AVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNS--- 500
Query: 627 ARSRYGSLHEVQQCLAVYQDMWK 649
A Y + E+++ +A+YQ M K
Sbjct: 501 AIGSYINAAELEKAIALYQTMRK 523
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 6/236 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G L A+ + ++ + PN+ T++ C + +
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSA 485
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+S+ + LN +NS + +NA +L+ + +Y+ M+K V AD ++ IL+ C
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSK 545
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ L + L YS+++ ++ A + M AG P+ I
Sbjct: 546 YPEAISYLKEMEDLS----IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVI 601
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
++S+++A + +A LF EM G EP+S C+ L++A + Q F L
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 198/448 (44%), Gaps = 39/448 (8%)
Query: 221 DILFCNF-VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
D+ NF + K + A++ ++ + +P+++ T+I G+C G+ K+R
Sbjct: 96 DVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS--GLCKSGNLEKARE 153
Query: 278 IYEDL--RSQNVTLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ E++ R +I +N+L+N D++ LE+ M+ G D+ +YN ++
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C+AG V A EI + D+ T++T++ F A AL+V E+M
Sbjct: 214 ALCVAGRVVEAAEILKTMS-------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ P+ IT++ L+N G V+ A +L EE+++ G P+ L+ ++ + + A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 453 FRLFRSWTLSKTQVALGEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+L + + + L E N T I SI+ + + S
Sbjct: 327 HKLVKEMSAREI---LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI-----SDLV 378
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGN 563
R + P TYN L+ C RV+ L +EM ++G PN ++ ++ G
Sbjct: 379 AR-GYVPDVVTYNTLIDGLCK-ANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGR 436
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ A ++ M +P+VV YT+ I +S R+ A + + M+ + + Y
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK 496
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + G V + +A+Y +M G
Sbjct: 497 LIVSMIHGG---RVAEAMAMYDEMVARG 521
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 164/356 (46%), Gaps = 59/356 (16%)
Query: 290 NIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+++ + H + T +VYK++ G ++ ++ IL++ C AG A E
Sbjct: 26 DVHSYNHLLDILVKSGHQFR-TGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEF 84
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ L+ V DV+ ++ ++ +F D Q A+K+ E+M S+ V P+ T++++I
Sbjct: 85 ---LRALDEFSVAP-DVYIFNFLIHGLFKDGNPDQ-AVKLFENMESSRVNPDIFTYNTVI 139
Query: 406 NACANAGLVEQAMHLFEEMLQAGCE--PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ +G +E+A L EEM++ G + P+ N L+ A + C+
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI--CK--------------- 182
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
DG+ + +E D + P TYN ++
Sbjct: 183 ---------DGDVEEA--LEILDGMKLAGP------------------APDVITYNSIIH 213
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
A C RV ++T+ SP+ +++ L+D +G + AL++L+ M + + PDV
Sbjct: 214 ALCV-AGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 272
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ YT + R +++ AF L EE+ P+++ Y +L+ + G + E +
Sbjct: 273 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 171/391 (43%), Gaps = 74/391 (18%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLG 319
++D+ G ++ +Y+DL + N+ F L+ N A LE + + +
Sbjct: 33 LLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFS 92
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ +N L+ GN A +++ +++E+ V D+FTY+T++ +
Sbjct: 93 VAPDVYIFNFLIHGLFKDGNPDQAVKLF---ENMESSRV-NPDIFTYNTVISGLCKSGNL 148
Query: 380 QMALKVKEDMLSAG--VTPNTITWSSLINA--CANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A ++ E+M+ G P+ +T+++LINA C + G VE+A+ + + M AG P+
Sbjct: 149 EKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD-GDVEEALEILDGMKLAGPAPDVIT 207
Query: 436 CNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N ++ A CV A R+ + + KT ++ +P
Sbjct: 208 YNSIIHALCV-------AGRVVEAAEILKT-------------------------MSCSP 235
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
+ V T+N L+ C +AL + EM + P+ I++T
Sbjct: 236 DLV-------------------TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 276
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL++ G V+ A +L+ + G PDV+AYT+ + +S +++A L +EM
Sbjct: 277 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336
Query: 613 QIQ---------PNLVTYITLLRARSRYGSL 634
+I P L TY +L + GS+
Sbjct: 337 EILAEMVSINMVPPLFTYNIVLGGLIKDGSI 367
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 37/304 (12%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K DV +Y+ ++ + + KV +D+L +G +PN +T+ LI AG +A+
Sbjct: 24 KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGED 471
+ + P+ N L+ + D+A +LF + S+ V G
Sbjct: 84 FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143
Query: 472 YDGNTDRISN-MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-CCTDY 529
GN ++ +E ++ + P+ V TYN L+ A C D
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIV-------------------TYNTLINAGICKDG 184
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+AL ++ M+ G +P+ I++ +I A +G V A +ILK M SPD+V +
Sbjct: 185 DVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFN 241
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + ++ L +A + EEM I P+++TY L+ R G +VQ + +++
Sbjct: 242 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG---QVQVAFYLLEEI 298
Query: 648 WKAG 651
+ G
Sbjct: 299 VRQG 302
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 510 SFKPTTTTYN----ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+K +YN IL+K+ +R + ++ G SPN +++ ILI +G
Sbjct: 22 GYKHDVHSYNHLLDILVKS--GHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+ L+ + E ++PDV + I + QA LFE M+ ++ P++ TY T++
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+L + ++ L ++M + G
Sbjct: 140 SGLCKSGNLEKARELL---EEMIRRG 162
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 173/389 (44%), Gaps = 38/389 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILL 331
K+ I+ +L+S+ V L+ Y F ++ F + +++ G+ ++ Y L+
Sbjct: 142 KAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
CC GN +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 201 DGCCKDGNVMLAKNLFCKMNRLG----LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 452 AFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
A +L LS V +G D + S N + +S S
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDV------RKMDSAVRLFNQLKSSGLS----- 365
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHISWTILIDACGGSG 562
PT TYN L+ Y +V+ L + EM ++P+ +++TILIDA
Sbjct: 366 ----PTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ E A ++ +M + G+ PDV Y+ + +K+A LF+ + +QPN V Y
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ + GS + + L + +M ++G
Sbjct: 478 TMIHGYCKEGSSY---RALRLLNEMVQSG 503
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 169/376 (44%), Gaps = 26/376 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM++ G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + ++ ++V Y D + + H +K
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT----YTILIDAFARLNHTEK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S ++ P TY++L+ C + L + + L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQ 470
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + + +I G+ AL++L M + GM P+V ++ + I + R ++ K+A L
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELL 530
Query: 606 FEEMKHYQIQPNLVTY 621
+M + ++P++ Y
Sbjct: 531 LGQMINSGLKPSVSLY 546
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 26/294 (8%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y T+V + + AL M+ G P + T+++L+ + ++A +F E L
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNE-L 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ ++ I+++ C EA F + FRL + LS V DG + M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSF--------------------DKRFSFKPTTTTYNILM 522
K+ N VPN H S KR P YN L+
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D KA + EMR G++ +++ ILI A++++ + + G+S
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
P++V Y I +++ A LF ++K + P LVTY TL+ S+ +L
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 15/235 (6%)
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T + +++NA ++ +QA+ M+ G P S N LL + + FD+A+ +F
Sbjct: 89 TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
K++V L G + FV + + F P
Sbjct: 149 EL---KSKVVLDAYSFGIMIK----------GCCEAGYFVKGFRLLAMLEEFGLSPNVVI 195
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ CC D K L +M +GL PN ++++L++ G Q+ + M+
Sbjct: 196 YTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ P+ AY I + +AF +F EM+ I ++TY L+ R
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 183/395 (46%), Gaps = 36/395 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I+ G+C G K+ + + + ++ +NS++N + D
Sbjct: 156 PDTTTFNTLIN--GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M++ V AD+ +Y+ ++ + C G A ++ K +E KG+ K V TY+++
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF---KEMETKGI-KSSVVTYNSL 269
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V+ A W + +DM+S + PN IT++ L++ G +++A L++EM+ G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDYDGNTDRISNME 483
PN N L+ + A + +K T +L + Y R+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY-CMVKRVD--- 385
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
D + + + KR TY+IL++ C + L EM +
Sbjct: 386 --DGMKV-----------FRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ +++ IL+D +G +E AL+I + +++ M +V YTT I+ + +++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A++LF + ++PN++TY ++ + GSL E
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 58/361 (16%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N + K + V M + G DM +YN ++ C +G+T LA + ++
Sbjct: 161 FNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA---FDMLR 217
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E + V K DVFTYSTI+ A+ + ++M + G+ + +T++SL+ A
Sbjct: 218 KMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G L ++M+ PN N+LL V+ + A L+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY--------------- 321
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
K+ IT P TYN LM C
Sbjct: 322 ---------------KEMITR-----------------GISPNIITYNTLMDGYCMQNRL 349
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A +++ M SP+ +++T LI V+ +++ + + + G+ + V Y+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
++ +S ++K A LF+EM + + P+++TY LL G L ++ L +++D+ K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL---EKALEIFEDLQK 466
Query: 650 A 650
+
Sbjct: 467 S 467
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 42/315 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K LE G+ +++T + ++ F A V ++ G P+T T+++LIN
Sbjct: 112 KQLELNGIAH-NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCL 170
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WT 460
G V +A+ L + M++ GC+P+ N ++ + AF + R +T
Sbjct: 171 EGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFT 230
Query: 461 LSKTQVALGED--YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S +L D D ME K K + TY
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETK------------------------GIKSSVVTY 266
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L++ C + L+ +M + + PN I++ +L+D G ++ A ++ K M
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+SP+++ Y T + RL +A ++ + M + P++VT+ +L++ Y +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKR 383
Query: 637 VQQCLAVYQDMWKAG 651
V + V++++ K G
Sbjct: 384 VDDGMKVFRNISKRG 398
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + NIY N ++N K F V + KLG D ++N L+ CL
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + V + G + D+ TY++IV + +A + M V +
Sbjct: 172 GKVSKAVVL---VDRMVENGC-QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+S++I++ G ++ A+ LF+EM G + + N L++ +A +++ L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL- 286
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
KD S PN + T
Sbjct: 287 ---------------------------KDMVSREIVPNVI-------------------T 300
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+L+ + L EM T G+SPN I++ L+D + A +L +M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ SPD+V +T+ IK KR+ +F + + N VTY L++ + G +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 636 EVQQCLAVYQDMWKAG 651
++ ++Q+M G
Sbjct: 421 LAEE---LFQEMVSHG 433
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 170/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P+M +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDMVTYNSIVN--GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-C-------ANAGL-------- 413
+ VF Q A ++ ++M++ G++PN IT+++L++ C AN L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 414 -------------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 92/343 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+G LA+E++ E + + GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQE---MVSHGVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------LC 519
Query: 457 RSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ +LS+ + L + + DGN P
Sbjct: 520 KKGSLSEANILLRKMEEDGNA------------------------------------PND 543
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 32/327 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y +++ C G+T LA + +++ +G L+ V Y+TI+ K
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKH 66
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + ++M + G+ PN +T+SSLI+ N G A L +M++ P+ +
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + S+ N F
Sbjct: 127 LIDAFVKEGKLVEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCM 168
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHI 549
+ + F F P TYN L+K C Y RV+ M EM GL N +
Sbjct: 169 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTV 227
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ILI +G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +++P + TY ++ + G + +
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVED 314
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 164/386 (42%), Gaps = 59/386 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 49 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 106
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 162
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 163 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 256
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 257 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGS 633
EMK PN Y TL+RAR R G
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGD 381
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 158/383 (41%), Gaps = 57/383 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K + + AL + + PN+ ++I G + + + D+ + + +++
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
F++L++ + K ++Y M K + + +Y+ L+ C+ A++++
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF--- 179
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + +K DV TY+T++K F K + ++V +M G+ NT+T++ LI
Sbjct: 180 EFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG + A +F+EM+ G PN N LL + + ++A +F SK +
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME----- 293
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
PT TYNI+++ C
Sbjct: 294 ------------------------------------------PTIYTYNIMIEGMCK-AG 310
Query: 531 RVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+V+ L + G+ P+ +++ +I G+ E A + K M+EDG P+ Y
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370
Query: 588 TAIKVCVRSKRLKQAFSLFEEMK 610
T I+ +R + + L +EM+
Sbjct: 371 TLIRARLRDGDREASAELIKEMR 393
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 149/355 (41%), Gaps = 56/355 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 177
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 233
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 325
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 326 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ LI A G+ E + +++K MR G + D + + RL ++F
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDKSF 420
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 17/265 (6%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M++ G P+ +T+ ++N G + A +L +M Q EP N ++ +
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A LF+ + N S++ + N + S S
Sbjct: 67 MDDALNLFKEMETKGIRP--------NVVTYSSL----ISCLCNYGRWSDASRLLSDMIE 114
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P T++ L+ A + V+A L +EM + P+ ++++ LI+ ++
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A Q+ + M PDVV Y T IK + KR+++ +F EM + N VTY L++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G Q+ ++++M G
Sbjct: 235 GLFQAGDCDMAQE---IFKEMVSDG 256
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL++ M G P+ +++ ++++ G+ + A +L M + + P V+ Y T I
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ K + A +LF+EM+ I+PN+VTY +L+ YG + + L+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 110
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 191/432 (44%), Gaps = 45/432 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++RA+ ++ + +N+L++ A +K +
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V ++M G D+ +YN+L C AG A + E++ L DV TY+T+V
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALP---DVVTYNTLV 356
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ E+M GV P +T + ++ + G +E+A+ E++ + G
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNM----EH 484
P+ N L+ A +A +AF TL V G D T + N+ +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAF------TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 485 KDKQSITNTP---NFVPN---------SHYSSFDKRFSFK-----------PTTTTYNIL 521
+D + + ++P FVP+ +++ ++ + + P+ +TYN L
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C +A+ +NE+ GL P+ ++ I+I A G++E A + M E+
Sbjct: 531 IKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV T + +L +A LFE + +++TY TL+++ + G +V
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG---DVDT 647
Query: 640 CLAVYQDMWKAG 651
L + DM G
Sbjct: 648 ALHFFDDMEVKG 659
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 155/357 (43%), Gaps = 63/357 (17%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ R + L++ N V ++L + + +L+V++++ +L + + ++N+L+
Sbjct: 163 RRRGVRPSLQAANA-----VLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G + + ++ G L D TY+T++ A + M G
Sbjct: 218 HCSKGTLA---DALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P T+++L++A A G ++QA + E M G EP+ + N+L +A + D AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
RL +R+S T P+ V
Sbjct: 334 RL-----------------KDEMERLS----------TALPDVV---------------- 350
Query: 514 TTTTYNILMKAC-----CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYN L+ AC +D R L+ EMR G+ P ++ I++ + G +E AL
Sbjct: 351 ---TYNTLVDACFKWRCSSDALR---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L+ + E+G++PDV+ Y T I ++ + +AF+L +EM ++ + T T+L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 144/356 (40%), Gaps = 57/356 (16%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V+ K+ L AL + + +P++ T+ID G+ K+ + +++ + +
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 288 TLNIYVFNSLMNVNAHDLKF---TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + N+++ N +K E+ + + G + D SY ++ A N A
Sbjct: 451 KMDTFTLNTVL-YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ ++ +E K L + TY+T++K + + A+ +++ G+ P+ T++ +
Sbjct: 510 RLWDQM--IERK--LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+A G +E A +M++ +P+ CN L+ + D+A +LF SW
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW----- 620
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V G+ D TYN L+++
Sbjct: 621 -VEKGKKVD-----------------------------------------VITYNTLIQS 638
Query: 525 CCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C D ++M GL P+ ++ +++ A +G E A +L + + G
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
+++ +P+ +P + F + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+ DG++P Y T + R +KQA
Sbjct: 240 SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATK 299
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M Y +P+L TY L + G + E
Sbjct: 300 VVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA 332
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTV---GLSPNHISWTILIDACG 559
S +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 160 SLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHC 219
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+ A +R G ++Q V + M G
Sbjct: 280 TYNTLVSAFARLGW---IKQATKVVESMTAYG 308
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ + K+ DL +A R ++ ++ P++ C T+++ + G K+ ++E +
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+++ +N+L+ D+ L + +M+ G+ D +YN++L A AG + +
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS---E 681
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI-TWSS 403
E + + L G L F + AD + E S N + T+
Sbjct: 682 EAHNMLHKLADSGKLS-QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYME 740
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+N G +++A + +EM+Q G +S L++ ++
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 174/390 (44%), Gaps = 66/390 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P+ Y R +I G +++ +DL ++ LN +++L++ + L+ L V
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K GV D+ Y +L+ +T ++G +K++ + L+ D Y++++
Sbjct: 634 CREMVKRGVDMDLVCYAVLIDGTIKEQDT---SAVFGLLKNMHDQR-LRPDKVIYTSMID 689
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A + A + + M+ G TPN +T+++LIN AGL+++A L++EML + P
Sbjct: 690 GYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTP 749
Query: 432 N--SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD--K 487
N + CC L ++A +L H D K
Sbjct: 750 NHVTYCC--FLDHLAREGSMEKAVQL----------------------------HNDMLK 779
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGL 544
+ NT +YNIL++ C RV+ L++EM +
Sbjct: 780 GLLANT----------------------VSYNILVRGFCK-LGRVEEATKLLDEMIDNAI 816
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ I+++ +I C GN++GA++ M G+ PD +AY I C + L +AF
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
L ++M ++PN T+ +L SR S+
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSHGASRKFSI 906
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 181/417 (43%), Gaps = 20/417 (4%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
+ V +K +V A + KK + P++++ +I+ G + ++ +++++ +
Sbjct: 336 SLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK 395
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ K ++ M G+ + YN L+ C GN A
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAA 455
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E + KG LK V +Y++++ + + A ++ +M G+ PNT T+++
Sbjct: 456 VSFFDE---MIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+A A + A LF+EML+ PN N++++ + +AF L
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV--- 568
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q L D IS++ + + F+ + H R FK Y+ L+
Sbjct: 569 -QKGLVPDTYTYRPLISSLCSTGR--VCEAKKFIDDLH------REHFKLNEMCYSALLH 619
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + AL EM G+ + + + +LID + +LK M + + P
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
D V YT+ I ++ +K+AF +++ M PN+VTY TL+ + G + + +
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 175/416 (42%), Gaps = 37/416 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
+ G C G ++ +Y ++ + + N Y F +L++ A+ + ++ M + +
Sbjct: 478 ISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
M + +YN++++ C GNTV A E+ + + KG++ D +TY ++
Sbjct: 538 MPNEVTYNVMIEGHCKEGNTVKAFEL---LNQMVQKGLVP-DTYTYRPLISSLCSTGRVC 593
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A K +D+ N + +S+L++ G + A+ + EM++ G + + C +L+
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653
Query: 441 QACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT----NT 493
++ F L ++ L +V DG + S + I T
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713
Query: 494 PNFVPNSHYSS-------FDK-RFSFKP---TTTTYNILMKACCTDYY-------RVKAL 535
PN V + + DK +K + +T N + C D+ + L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
N+M GL N +S+ IL+ G VE A ++L M ++ + PD + Y+T I C R
Sbjct: 774 HNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L A ++ M + ++P+ + Y L+ G E+ + + DM + G
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAG---ELGKAFELRDDMIRRG 885
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 144/361 (39%), Gaps = 60/361 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L + D+ L ++ + +G+ D+ Y ++++ C N A+E+ ++
Sbjct: 199 VLNGLAKIRRVDM--VLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM---IQR 253
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ L+V Y+ ++ K A+++K ++ G+T + +T+ +L+
Sbjct: 254 MESS---DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
E + +EM++ G P + L++ + AF L
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDL----------------- 353
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
+R+ K+ P+ YN L+ + C D +
Sbjct: 354 ---VNRV---------------------------KKVGAMPSLFVYNALINSLCKDGKFD 383
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L EM GL N ++++ILID+ G ++ A+ L M G+ V Y + I
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ L A S F+EM ++P +V+Y +L+ G LHE +Y +M
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA---FRLYHEMTGK 500
Query: 651 G 651
G
Sbjct: 501 G 501
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 31/343 (9%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ YN+L+ C A EI L KG+ +V TY T+V + +++
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIK---NGLIQKGLTASEV-TYCTLVLGLCKVQEFEVG 315
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
V ++M+ G P SSL+ G V A L + + G P+ N L+ +
Sbjct: 316 AGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINS 375
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ------------SI 490
+ +FD A LF+ K A Y D D I
Sbjct: 376 LCKDGKFDEAELLFKEMG-EKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKI 434
Query: 491 TNTP-NFVPNSH---------YSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALM 536
T P N + N H S FD+ KPT +Y L+ C + L
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY 494
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+EM G++PN ++T LI A + + A ++ M E M P+ V Y I+ +
Sbjct: 495 HEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKE 554
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+AF L +M + P+ TY L+ + G + E ++
Sbjct: 555 GNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKK 597
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + + + K + A +D +PN+ T+I+ G K+ ++++
Sbjct: 682 VIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKE 741
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ N T N + ++ A + ++ ++++ +M K G++A+ SYNIL++ C G
Sbjct: 742 MLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGR 800
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+ + D TYSTI+ A++ + ML+ G+ P+T+
Sbjct: 801 VEEATKLLDEM----IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ LI C AG + +A L ++M++ G +PN
Sbjct: 857 AYNFLIYGCCIAGELGKAFELRDDMIRRGVKPN 889
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 186/430 (43%), Gaps = 41/430 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ T++ G ++R + ++ + + +N+L++ A +K
Sbjct: 242 SPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATN 301
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G D+ +YN+L C AG A ++ E++HL ++ DV TY+T+V
Sbjct: 302 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL---SIVSPDVVTYNTLV 358
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL + E+M GV + +T + ++ G +E+A+ + M + G
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDK 487
P+ N L+ A +A +AF L S ++ + + NT + +++
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM---DTFTLNTLLYNLCKEKRYEEA 475
Query: 488 QSITNTP---NFVPNS---------------------HYSSFDKRFSFKPTTTTYNILMK 523
+ + +P FVP+ + KR P+ TYN L+K
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR-KLTPSIYTYNTLIK 534
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT +A+ +NE+ GL P+ ++ I+I A G++E A Q M E+ P
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DVV T + +L++A LFE + +++TY TL++A + G +V L
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG---DVDTAL 651
Query: 642 AVYQDMWKAG 651
+ DM G
Sbjct: 652 HFFADMEARG 661
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 54/336 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V ++L + + +L+V++++ L + + ++N+L+ C G LA + +
Sbjct: 179 VLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG--TLADAL-STLST 235
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ G L DV TY+T++K A + M G+ P T+++L++A A G
Sbjct: 236 MQGFG-LSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLG 294
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++QA ++ E M G EP+ N+L +A + D AF+L
Sbjct: 295 WIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL----------------- 337
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
MEH SI + P TYN L+ AC Y R
Sbjct: 338 ------KDEMEH---LSIVS--------------------PDVVTYNTLVDACF-KYQRS 367
Query: 533 KALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+N EMR G+ + ++ I++ G +E AL LK+M E+G++PDV+ Y T
Sbjct: 368 SDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTL 427
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I +++ + +AF L +EM ++ + T TLL
Sbjct: 428 IDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 44/378 (11%)
Query: 249 KHLS--SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+HLS SP++ T++D C + + E++R + V ++ N ++
Sbjct: 342 EHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQ 401
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L K M + G+ D+ +YN L+ A C A N A + E+ + LK+D F
Sbjct: 402 LEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM----VRSGLKMDTF 457
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +T++ K ++ A ++ G P+ +++ +++ A E A++L++EM
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P+ N L++ T+ K A+ D+++ +
Sbjct: 518 SKRKLTPSIYTYNTLIKGLC---------------TIGKLTEAI--------DKLNELMK 554
Query: 485 KDKQSITNTPNFVPNSH--YSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVK 533
K T N + +++ +K F F KP T N LM C K
Sbjct: 555 KGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEK 614
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L G + I++ LI A G+V+ AL M G+ PD Y +
Sbjct: 615 AIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 674
Query: 592 VCVRSKRLKQAFSLFEEM 609
+ R ++A ++ ++
Sbjct: 675 ALSEAGRSEEAQNMLHKL 692
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 158/415 (38%), Gaps = 91/415 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID + K+ + +++ + ++ + N+L+ + ++ E
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 477
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++ + G + D SY ++ A A ++ E+ +K L ++TY+T++
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM----SKRKLTPSIYTYNTLI 533
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A+ +++ G+ P+ T++ +I+A G +E+A +ML+ +
Sbjct: 534 KGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFK 593
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ CN L+ + ++A +LF SW +V +
Sbjct: 594 PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV---------------------- 631
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
TYN L++A C D AL +M GL P+
Sbjct: 632 -------------------------ITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGM---------------------SPDVVA-- 585
++ +++ A +G E A +L + E G P+V +
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDC 726
Query: 586 -------------YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y ++K +LK+A ++ +EM + + TYITL+
Sbjct: 727 ESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 504 SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTV---GLSPNHISWTILIDACG 559
SF +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 162 SFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHC 221
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPDVV Y T +K R L +A +L MK I P
Sbjct: 222 SKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRA 281
Query: 620 TYITLLRARSRYGSLH------EVQQCLAVYQDMW 648
TY TL+ A +R G + E D+W
Sbjct: 282 TYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLW 316
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 509 FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P TYN L+KA C + L+ M+ G++P ++ L+ A G ++
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLL 625
A +++ M G PD+ Y ++ ++ +AF L +EM+H I P++VTY TL+
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358
Query: 626 RARSRY 631
A +Y
Sbjct: 359 DACFKY 364
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
++ +P+ P + F + + P T+N+L+ C+ AL ++ M+ GL
Sbjct: 182 ALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGL 241
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L+ A G + A +L M+++G++P Y T + R +KQA +
Sbjct: 242 SPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATN 301
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ E M + +P+L TY L + G + E
Sbjct: 302 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 334
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 148/330 (44%), Gaps = 26/330 (7%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
+S+++ +V G+ REG+++ +G LK + E G+AP + + L+ C+
Sbjct: 384 SSLVTHNIVVKGLC---REGQLEEALGRLKMMTEEGLAPDVITYNT---LIDAYCKA--- 434
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK--PDVNLAIRYAC---IVPRADI 222
+ FV LM+ + L + + LC K + +R VP ++
Sbjct: 435 RNVAKAFV-LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPD-EV 492
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYE 280
+ + + K+ AL +D K +P++Y T+I G+C G ++
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK--GLCTIGKLTEAIDKLN 550
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+L + + + +N +++ DL+ + + M + D+ + N L+ CL G
Sbjct: 551 ELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHG 610
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + KG K+DV TY+T+++ AL DM + G+ P+
Sbjct: 611 KLEKAIKLF---ESWAEKGK-KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAG 428
T++ +++A + AG E+A ++ ++ ++G
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 107/234 (45%), Gaps = 10/234 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D + + + K+ DL A + ++ ++ P++ C T+++ + G K+
Sbjct: 557 LVPD-DTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++E + +++ +N+L+ D+ L + +M+ G+ D +YN++L A
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG + AQ + + L+ G L + F+Y I + K + +VK D S G
Sbjct: 676 LSEAGRSEEAQNM---LHKLDESGKLS-ERFSYPLIKSSAEEVKTGKDP-EVKSDCESGG 730
Query: 394 VTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ +++ + G +++A + +EM+Q G +S L++ ++
Sbjct: 731 NAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 170/430 (39%), Gaps = 68/430 (15%)
Query: 215 CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
C+ P F V KK ++ + R +D K PN++ I G+C +
Sbjct: 290 CLCPDVTT-FNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ--GLCKEGSL 346
Query: 275 SRAIY-------EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
RA+ E LR VT N + + + E M G + +Y
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE---ECLHKMVNGGFEPNDFTY 403
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C G V A I +K KG K D FTY ++V F A+ V +
Sbjct: 404 NSIIDGYCKKGMVVDANRI---LKDAVFKG-FKPDEFTYCSLVNGFCQDGDPDQAMAVFK 459
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEA 446
D L G+ P+ I +++LI GL+ A+ L EM + GC+P+ N+++ C
Sbjct: 460 DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMG 519
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C +S+ H +IT
Sbjct: 520 C-------------------------------LSDANHLIGDAITK-------------- 534
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C A L+N M + G++P+ I++ L++ +
Sbjct: 535 ---GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ++I K M E G +P+++ Y T I+ SK++ +A L EMK + P++V++ TL
Sbjct: 592 EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651
Query: 625 LRARSRYGSL 634
+ + G L
Sbjct: 652 ITGFCKVGDL 661
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 178/410 (43%), Gaps = 27/410 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAY-DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D + + + + KK +V A R DA K C + C GD ++ A++
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD-GDPDQAMAVF 458
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+D + + +I V+N+L+ + L++ M + G D+ +YN+++ C
Sbjct: 459 KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A + G+ KG + D+FTY+T+V + A+++ M S G+TP+
Sbjct: 519 GCLSDANHLIGDAI---TKGCIP-DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 574
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
IT+++L+N E+ M +F+ M + GC PN N ++++ + + + A L
Sbjct: 575 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634
Query: 457 --RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+S L+ V+ G G ++ +++ + +K++ T
Sbjct: 635 EMKSKGLTPDVVSFGTLITGFC-KVGDLDG-------------AYGLFRGMEKQYDVSHT 680
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TYNI++ A A L +EM+ G P++ ++ +LID +GNV + L
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E G P + + + ++++A + M I P+ V I
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTI 790
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 156/385 (40%), Gaps = 36/385 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASY 327
G ++ +E + N ++Y +N++MN+ F +VY M+ V +D+ +Y
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C G A + ++++ G + Y T+V F + A ++ +
Sbjct: 229 TIRIKSFCRTGRPYAALRL---LRNMPVLGCFS-NAVAYCTVVTGFYEFGDNDRARELFD 284
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML + P+ T++ L++A G V ++ LF+++L+ G PN NI +Q +
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344
Query: 448 QFDRAFRL--------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
DRA RL R ++ V G HK + N
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK----MVNG------ 394
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
F+P TYN ++ C V A ++ + G P+ ++ L++
Sbjct: 395 ----------GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ + A+ + K G+ P ++ Y T IK + + A L EM +P+
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
+ TY ++ + G L + +
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIG 529
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 160/364 (43%), Gaps = 24/364 (6%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMAS 326
GD ++R +++++ + ++ FN L++ F LE ++ + K GV ++ +
Sbjct: 274 GDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK-GFVLESERLFDKVLKRGVCPNLFT 332
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+NI ++ C G+ A + G V ++ L+ DV TY+T++ A +
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCV----SREGLRPDVVTYNTVICGLCRKSRVVEAEECL 388
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M++ G PN T++S+I+ G+V A + ++ + G +P+ L+ +
Sbjct: 389 HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD 448
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSF 505
D+A +F+ D G R S + + + + +P +
Sbjct: 449 GDPDQAMAVFK-------------DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
KP TYN+++ C A L+ + T G P+ ++ L+D
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A++++ M GM+PDV+ Y T + ++ + ++ +F+ M PN++TY T
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615
Query: 624 LLRA 627
++ +
Sbjct: 616 IIES 619
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 146/390 (37%), Gaps = 80/390 (20%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKA---- 333
YED+ +N+ L+ K TL YK+M QKLG LL
Sbjct: 97 YEDVCIRNL--------QLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN 148
Query: 334 ---CCLAGNTVLAQEIYGE-------VKHLEAKGVLKLD--VFTYSTIVKVFADAKWWQM 381
L G V A YG V E + D V++Y+ I+ + + ++
Sbjct: 149 LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQ 208
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M V + T++ I + G A+ L M GC N+
Sbjct: 209 AHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNA-------- 260
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
V C F F G+ DR +
Sbjct: 261 --VAYCTVVTGFYEF-----------------GDNDRAREL------------------- 282
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
FD+ P TT+N L+ A C + +++ L +++ G+ PN ++ I I
Sbjct: 283 ---FDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQG 339
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+++ A+++L + +G+ PDVV Y T I R R+ +A +M + +PN
Sbjct: 340 LCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 399
Query: 618 LVTYITLLRARSRYGSLHEVQQCL--AVYQ 645
TY +++ + G + + + L AV++
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRILKDAVFK 429
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 162/384 (42%), Gaps = 56/384 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVY 312
+Y +I G G + ++ +++ ++ + N+ +N++++ + K + +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
MQ+ GV D ++N LL C G A+ ++ E+ + ++ DVF+Y+T++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR----IEQDVFSYNTLLDA 383
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+A ++ M + PN +++S++I+ A AG ++A++LF EM G +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL + + + A + R ++G
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILRE------MASVG----------------------- 474
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
K TYN L+ Y VK + EM+ + PN ++
Sbjct: 475 ------------------IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G + A++I + + G+ DVV Y+ I ++ + A SL +EM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 611 HYQIQPNLVTYITLLRARSRYGSL 634
I PN+VTY +++ A R ++
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATM 600
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A+ +++ K++ PN+ +ID CG G ++ + ++++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + K ++ +V +YST++ FA A + AL + +M G+ + ++
Sbjct: 391 DLAFEI---LAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF---- 502
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T++ KR P TY+
Sbjct: 503 ---TEM----------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS + ++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 168/432 (38%), Gaps = 91/432 (21%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG- 317
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ + K F ++M GV P+ I
Sbjct: 318 ------------------------MEFKQVAKFF-------------DEMQRNGVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + PN V S T +
Sbjct: 401 PVKRIM----------------------------PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR +G++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAG 651
+ ++++ AG
Sbjct: 533 AMEIFREFKSAG 544
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 29/306 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+ID G + ++ ++ ++R + L+ +N+L+++ + L++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M +G+ D+ +YN LL G ++++ E+K + VL ++ TYST++
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR---EHVLP-NLLTYSTLID 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+++ + SAG+ + + +S+LI+A GLV A+ L +EM + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGN---------TDRIS 480
N N ++ A + DR+ +L + AL + +GN T +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 481 NMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
N KD Q ++ H + KP T++ ++ AC C +
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMH------QLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 535 LMNEMR 540
L+ E+R
Sbjct: 697 LLEELR 702
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 62/435 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
ME K P+ +Y
Sbjct: 359 -----------------------MEAK------------------------GLTPSEVSY 371
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ C ++ + M+ G+ I++T +ID +G ++ A+ +L M +
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG+ PD+V Y+ I + R K A + + + PN + Y TL+ R G L E
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y+ M G
Sbjct: 492 A---IRIYEAMILEG 503
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 159/420 (37%), Gaps = 82/420 (19%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+K + PN T+I+ G + + + ++ S ++ N FN+L++ ++ +
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------GE 349
K L+++ M+ G+ SY +LL C LA+ Y G
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 350 VKHLEAKGVLK---------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ L G L D+ TYS ++ F ++ A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+PN I +S+LI C G +++A+ ++E M+ G + N+L+ + +A + A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R T DG P
Sbjct: 530 FMRCMT-----------SDG------------------------------------ILPN 542
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +++ L+ +KA + +EM VG P ++ L+ G++ A + LK
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + D V Y T + +S L +A SLF EM I P+ TY +L+ R G
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 33/342 (9%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------- 485
N+L+ C + + AF L + ++ ++L +D + N H+
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 486 ----DKQSIT-NTPNFVP--NSHYSSFDKRFSFK-----------PTTTTYNILMKAC-- 525
KQ I+ + ++ N D + +F P + +++A
Sbjct: 882 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M + L P S+T L+ C +GNV AL++ +M G+ D+V+
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y I + AF L+EEMK N TY L+R
Sbjct: 1002 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 62/435 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
ME K P+ +Y
Sbjct: 359 -----------------------MEAK------------------------GLTPSEVSY 371
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ C ++ + M+ G+ I++T +ID +G ++ A+ +L M +
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG+ PD+V Y+ I + R K A + + + PN + Y TL+ R G L E
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y+ M G
Sbjct: 492 A---IRIYEAMILEG 503
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 159/420 (37%), Gaps = 82/420 (19%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+K + PN T+I+ G + + + ++ S ++ N FN+L++ ++ +
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------GE 349
K L+++ M+ G+ SY +LL C LA+ Y G
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 350 VKHLEAKGVLK---------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ L G L D+ TYS ++ F ++ A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+PN I +S+LI C G +++A+ ++E M+ G + N+L+ + +A + A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R T DG P
Sbjct: 530 FMRCMT-----------SDG------------------------------------ILPN 542
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +++ L+ +KA + +EM VG P ++ L+ G++ A + LK
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + D V Y T + +S L +A SLF EM I P+ TY +L+ R G
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 33/342 (9%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------- 485
N+L+ C + + AF L + ++ ++L +D + N H+
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 486 ----DKQSIT-NTPNFVP--NSHYSSFDKRFSFK-----------PTTTTYNILMKAC-- 525
KQ I+ + ++ N D + +F P + +++A
Sbjct: 882 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M + L P S+T L+ C +GNV AL++ +M G+ D+V+
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y I + AF L+EEMK N TY L+R
Sbjct: 1002 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A + M PN++ Y ++ + G E + +++ ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 138/375 (36%), Gaps = 81/375 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
C + + EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLL-- 531
Query: 637 VQQCLAVYQDMWKAG 651
QQ + +M + G
Sbjct: 532 -QQARKWFDEMVRDG 545
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 175/439 (39%), Gaps = 38/439 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R + SA ++ PN+ +ID G K+ IY
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 282 LRSQ----NVTL------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+R +V + NI+ + +L++ AH +K ++ M G +
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQ ++ + + +G +V+TYS+++ K +AL
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML PN I ++ +I+ G ++A L M + GC PN ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+A + D+ L R A G + T R+ + H + ++H
Sbjct: 787 GKAGKVDKCLELMRQMG------AKGCAPNFVTYRVL-INH------CCAAGLLDDAHQL 833
Query: 504 SFDKRFSFKPT-TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + ++ P Y +++ ++ L++E+ P ++ ILID+ +G
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Query: 563 NVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL++ K M + D Y++ I+ + ++ +AF L+ +M P L
Sbjct: 894 RLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSI 953
Query: 621 YITLLRARSRYGSLHEVQQ 639
+ L++ R E Q
Sbjct: 954 FFYLVKGLIRINRWEEALQ 972
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 62/435 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 167 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 222
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 283 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
ME K P+ +Y
Sbjct: 399 -----------------------MEAK------------------------GLTPSEVSY 411
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ C ++ + M+ G+ I++T +ID +G ++ A+ +L M +
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG+ PD+V Y+ I + R K A + + + PN + Y TL+ R G L E
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y+ M G
Sbjct: 532 A---IRIYEAMILEG 543
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 346
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 525 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 641 L 641
L
Sbjct: 641 L 641
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 579 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 635
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 696 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 813 SFLLYRSIILN--------------------------------GILPDK----------- 829
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 830 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 887 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 946
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 947 VG---DIKTAFVVKEEM 960
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 159/420 (37%), Gaps = 82/420 (19%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+K + PN T+I+ G + + + ++ S ++ N FN+L++ ++ +
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------GE 349
K L+++ M+ G+ SY +LL C LA+ Y G
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 350 VKHLEAKGVLK---------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ L G L D+ TYS ++ F ++ A ++ + G+
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+PN I +S+LI C G +++A+ ++E M+ G + N+L+ + +A + A
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R T DG P
Sbjct: 570 FMRCMT-----------SDG------------------------------------ILPN 582
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +++ L+ +KA + +EM VG P ++ L+ G++ A + LK
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + D V Y T + +S L +A SLF EM I P+ TY +L+ R G
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 33/342 (9%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 803
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------- 485
N+L+ C + + AF L + ++ ++L +D + N H+
Sbjct: 864 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921
Query: 486 ----DKQSIT-NTPNFVP--NSHYSSFDKRFSFK-----------PTTTTYNILMKAC-- 525
KQ I+ + ++ N D + +F P + +++A
Sbjct: 922 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 981
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M + L P S+T L+ C +GNV AL++ +M G+ D+V+
Sbjct: 982 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y I + AF L+EEMK N TY L+R
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 900
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 993
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 994 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 1031
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1082
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 164/385 (42%), Gaps = 76/385 (19%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + +++ + L+ Y +N+L++ K +V+ M+ G D ++N LL
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLL--- 291
Query: 335 CLAGNTVLAQEIYGEVK-HLEAKGVLK--------LDVFTYSTIVKVFADAKWWQMALKV 385
++YG+ + H EA GVLK V TY++++ + + A ++
Sbjct: 292 ----------DVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAEL 341
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
KE+M G+ P+ IT+++LI+ AG ++ A+ ++EML+ GC+PN N L++
Sbjct: 342 KEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGV 401
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+F +F
Sbjct: 402 RGKFPEMMAVFDDL---------------------------------------------- 415
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F P T+N L+ + V + EM+ G P ++ LI + G
Sbjct: 416 -RSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ +++I K M E G+ PD+ Y + R R +QA LF EM++ +P+ ++Y +
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMW 648
LL A Y + ++ + A+ +D++
Sbjct: 535 LLHA---YANAKKLDKMKALSEDIY 556
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 201/458 (43%), Gaps = 39/458 (8%)
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
EL EE + + +PDV I + + + + +A+ YD +
Sbjct: 340 ELKEEMEVKGI---QPDV--------------ITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLK 306
+ PN+ +I + G+ G + + A+++DLRS ++ +N+L+ V N D +
Sbjct: 383 NGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE 442
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ V+K M+K G + + +Y L+ + G + EIY K + G+ D+ TY
Sbjct: 443 VS-GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIY---KRMIEAGIYP-DISTY 497
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ A W+ A K+ +M + P+ +++SSL++A ANA +++ L E++
Sbjct: 498 NAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYA 557
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
E + L+ + + F L + + +L D N +
Sbjct: 558 EKIESHHGLVKTLVLVNSKVNNLSETEKAF--LELGRRRCSL----DINVLNAMVSVYGK 611
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGL 544
+ + + S K S +T TYN LM + D + + ++ E+++ G
Sbjct: 612 NRMVKKVEEIL------SLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGA 665
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ S+ +I A G G ++ A ++ M+ G+ PD+V Y +K V + ++A
Sbjct: 666 RPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAID 725
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
L M +PN TY ++L+ R+G + + + L+
Sbjct: 726 LVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLS 763
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +++L++A + A A+ +F M+ G +P N++L ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYS---------KI 226
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
W K VAL D + N + +P Y
Sbjct: 227 AVPW---KDVVAL-------VDSMKN-------------DGIPLDRY------------- 250
Query: 516 TTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN L+ +CC Y + +EMR G P+ +++ L+D G + + A+ +LK
Sbjct: 251 -TYNTLI-SCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLK 308
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M G P VV Y + I V+ LK+A L EEM+ IQP+++TY TL+ R G
Sbjct: 309 EMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAG 368
Query: 633 SLHEVQQCLAVYQDMWKAG 651
++ + Y +M + G
Sbjct: 369 ---KIDAAIGTYDEMLRNG 384
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 165/397 (41%), Gaps = 67/397 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314
+ Y T+I C Y ++ +++++R+ + FNSL L+VY
Sbjct: 248 DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSL-----------LDVY-- 294
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
G + E G +K +E G V TY++++ +
Sbjct: 295 -----------------------GKARMHDEAIGVLKEMELGGC-PPSVVTYNSLISSYV 330
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A ++KE+M G+ P+ IT+++LI+ AG ++ A+ ++EML+ GC+PN
Sbjct: 331 KDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLC 390
Query: 435 CCNILLQACVEACQFDRAFRLF---RSW-------TLSKTQVALGEDYDGNTDRISNMEH 484
N L++ +F +F RS T + G+ +G +S +
Sbjct: 391 TYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ--NGLDSEVSGVFK 448
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
+ K+S +VP +R ++ ++Y + C + + + M G+
Sbjct: 449 EMKKS-----GYVP--------ERDTYVSLISSY-----SRCGLFDQSMEIYKRMIEAGI 490
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ ++ ++ A G E A ++ M PD ++Y++ + +K+L + +
Sbjct: 491 YPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKA 550
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L E++ +I+ + TL+ S+ +L E ++
Sbjct: 551 LSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAF 587
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 57/295 (19%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQAMHL 420
D Y+ +V F+ A ++ A+ V M++ G+ P +T++ +++ + + + + L
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M G + N L+ C + A ++F
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEM--------------------- 275
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALM 536
+ F+P T+N L+ KA D ++
Sbjct: 276 --------------------------RAAGFEPDKVTFNSLLDVYGKARMHD--EAIGVL 307
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G P+ +++ LI + G ++ A ++ + M G+ PDV+ YTT I R+
Sbjct: 308 KEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRA 367
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A ++EM +PNL TY L++ G E+ +AV+ D+ AG
Sbjct: 368 GKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEM---MAVFDDLRSAG 419
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ L+ +NSLM++ + D + + ++ G D SYN ++ A G
Sbjct: 625 MKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQ 684
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E+K + G++ D+ TY+ VK + ++ A+ + M++ G PN
Sbjct: 685 MKEASRLFSEMK---SSGLIP-DIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNER 740
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQ 426
T++S++ G + A + Q
Sbjct: 741 TYNSILQEYCRHGKIADAKSFLSNLPQ 767
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 153/387 (39%), Gaps = 64/387 (16%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++ + S + N+Y N L+N H + F V + KLG D AS+
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVK 386
L+K CL G GE HL K + + DV Y+T++ A+++
Sbjct: 150 LIKGLCLEGQI-------GEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
M P+ + + +LI++ QA +LF EM+ G PN CN L+ A
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++ L SK
Sbjct: 263 GEWKHVNTLLNEMVDSKIM----------------------------------------- 281
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P + ++ A C + +A +++ M G+ P+ +++T LID +
Sbjct: 282 ------PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+++ +M G +P+V +Y T I + +R+ +A LFEEM ++ PN VTY TL
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L Q +A++++M G
Sbjct: 396 IHGLCHVGRL---QDAIALFREMVACG 419
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 126/583 (21%), Positives = 228/583 (39%), Gaps = 119/583 (20%)
Query: 89 EFAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSIRE-----------GRIDCVVGV 135
+FA I+ S+ V +++++LSL +M + GI ++ R++ V
Sbjct: 76 DFAKILTSIT----KVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 136 LKKLNELGVAPLELFDGSGFK-LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEE 194
L K+ +LG P D + F L+K C +E +G E L K + E
Sbjct: 132 LAKILKLGCQP----DTASFTTLIKGLC--------LEGQIG-----EALHLFDKMIWEG 174
Query: 195 FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
F +PDV +++ + K +A+R + +K P
Sbjct: 175 F--------QPDV--------------VIYATLINGLCKTGHTSAAIRLLRSMEKGNCQP 212
Query: 255 NMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
++ + T+I +C D +++A ++ ++ ++ ++ NI NSL+ N + K
Sbjct: 213 DVVVYGTLIH--SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNT 270
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M +M + S ++ A C G A ++ V + GV + DV TY+ ++
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDV---VDMMFQSGV-EPDVVTYTALI 326
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+KV + M+ G PN ++++LIN +++AM+LFEEM +
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN+ N L+ + A LFR VA G+
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFRE------MVACGQ-------------------- 420
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNH 548
P TY IL+ C + + + AL+ + L P+
Sbjct: 421 ---------------------IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+TI+ID +G +E A + + G+ P+V Y + L +A LF E
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M + TY T+ + R +E + + + ++M G
Sbjct: 520 MDENACSADGCTYNTITQGFLRN---NETSRAIQLLEEMLARG 559
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 187/410 (45%), Gaps = 43/410 (10%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
C D MK + + + + N L+++ + +N + + L Y M +L + + + ++N
Sbjct: 188 CFDMMKEKGVVPKIETFNAMLSLF-----LKLNQTETVWVL--YAEMFRLKIKSTVYTFN 240
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ C G A++ G +++L GV K +V TY+T++ + + A V +
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENL---GV-KPNVVTYNTVIHGYCSRGRVEGARMVLDI 296
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M + GV P++ T+ SLI+ G +E+A + E+M + G P + N L+
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356
Query: 449 FDRAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNM--EHKDKQSITN--TPN 495
+AF +R + + + Y +G D M + D + + T N
Sbjct: 357 LVKAFG-YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415
Query: 496 FVPNSH---------YSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA---LMNEMRT 541
+ N + ++ D+ S +PT TY L+ + R+KA L ++
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLI-YVLSKRNRMKAADDLFEKIIR 474
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G SP+ I + LID +GN++ A +LK M + + PD V Y T ++ R ++++
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L +EMK I+P+ ++Y TL+ S+ G ++ + +M G
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYSKRG---DINDAFTIRDEMLSIG 581
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 160/389 (41%), Gaps = 59/389 (15%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
D K P+ Y ++I G+C G ++ I E ++ + +N+L++
Sbjct: 295 DIMKNRGVEPDSYTYGSLI--SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYC 352
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N DL M + ++ +++YN+L+ A L G E G +K + G++
Sbjct: 353 NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKM---DEADGMIKDMGDSGIVP 409
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D TY+ ++ + + A + ++M+S G+ P +T++SLI + ++ A L
Sbjct: 410 -DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FE++++ G P+ N L+ DRAF L +
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM--------------------- 507
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
DK++I P TYN LM+ C + + L+ E
Sbjct: 508 -----DKRNIV---------------------PDEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ G+ P+HIS+ LI G++ A I M G +P ++ Y I+ ++++
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
A L +EM I P+ TY +L+
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 170/392 (43%), Gaps = 41/392 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y ++ + +Y FN ++NV LK + +M+ LGV ++ +YN ++ C
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A+ + +K+ +GV + D +TY +++ + A + E M G+
Sbjct: 283 SRGRVEGARMVLDIMKN---RGV-EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL 338
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+++LI+ N G + +A +EM++ P N+L+ A + D A +
Sbjct: 339 PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--- 504
+ +++ + G GN + N+ H + S P V Y+S
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNL-HDEMISKGIQPTLVT---YTSLIY 454
Query: 505 --------------FDK--RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
F+K R P +N L+ C + R AL+ EM + P
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP 514
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ L+ G VE A ++LK M+ G+ PD ++Y T I + + AF++
Sbjct: 515 DEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIR 574
Query: 607 EEMKHYQIQPNLVTYITLLRA--RSRYGSLHE 636
+EM P L+TY L++ +++ G L E
Sbjct: 575 DEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE 606
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 19/260 (7%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T ++I + LI AC + A F+ M + G P + N +L ++ Q + +
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ K + + Y N + N+ K+ + + +F+ + + KP
Sbjct: 223 LYAEMFRLKIKSTV---YTFNI--MINVLCKEGK-LKKAKDFIGSM------ENLGVKPN 270
Query: 515 TTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN ++ C+ RV+ +++ M+ G+ P+ ++ LI G +E A IL
Sbjct: 271 VVTYNTVIHGYCS-RGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+E G+ P V Y T I L +AF +EM I P + TY L+ A
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLE 389
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + E + +DM +G
Sbjct: 390 GKMDEAD---GMIKDMGDSG 406
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K+ + +A ++ + +SP++ + +ID G+ ++ A+ ++
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ + +N+LM + K E+ K M++ G+ D SYN L+ G+
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A I E+ + L TY+ +++ + +A ++ ++M+S G+TP+
Sbjct: 567 INDAFTIRDEMLSIGFNPTL----LTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622
Query: 400 TWSSLINACA 409
T+ SLI
Sbjct: 623 TYFSLIEGIG 632
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 177/408 (43%), Gaps = 48/408 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFT 308
P++ I T+ID G+C G + + E +RSQ + +N L++ A +++
Sbjct: 381 PDVVIYNTLID--GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E++ M K GV ++ + N L+ C G A + E + KG D TY+
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKG----DAVTYTA 494
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ++ A+++ +ML +G +P+ I + +LI+ + AG + A + E+ + G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P++ C N L+ +F R F + + ME +
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKE-----------------------MEEAGLK 591
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKAL-- 535
T T N + + D +F+ K PT TY ++ A C + +A+
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651
Query: 536 MNEMRTVG-LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+M+ + PN + + ILI++ + V+ A+ +++ M+ G++P+ Y K
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
K L++ F + M + P+ +T L S G + +++ +A
Sbjct: 712 DEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVA 759
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 30/353 (8%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M KLG + + A+ N LL GN E+ ++ ++ ++ +V T+ +
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD----IQPNVVTFGIL 346
Query: 370 VKVFADAKWWQMALKVKEDM--------LSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+ + AL+V E M +S V P+ + +++LI+ G ++ + L
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406
Query: 422 EEML-QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M Q GC P++ N L+ +A + ++ LF ++K VA + +
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDE--MNKEGVA--PNVVTVNTLVG 462
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
M + +++ NF + +R K TY L+ A C ++ + L NE
Sbjct: 463 GMCRTGR--VSSAVNFFVEA------QRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G SP+ I + LI +G + A +L +++ G+ PD V Y T I R+ +
Sbjct: 515 MLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ F + +EM+ ++P+ +TY TL+ S+ G L Q+ V + M KAG
Sbjct: 575 FHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQK---VMRKMIKAG 624
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 37/405 (9%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYK 313
C +++ G++ + + E + ++ N+ F L+N H KF LEV +
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN---HMCKFRRVDDALEVLE 364
Query: 314 NMQ--------KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
M + V D+ YN L+ C G QE G ++ + ++ D T
Sbjct: 365 KMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR---QQEGLGLMERMRSQKGCAPDTIT 421
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ F A + ++ ++M GV PN +T ++L+ G V A++ F E
Sbjct: 422 YNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQ 481
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G + ++ L+ A F++A LF S D IS
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS----GCSPDAIVYYTLISGFSQA 537
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVG 543
+ + +FV K+ +P T YN L+ C ++RV ++ EM G
Sbjct: 538 GRMA---DASFVLAEL-----KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ I++ LI +G+++ A ++++ M + G+ P V Y I + +A
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 604 SLFEEMKHY-QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F++MK ++ PN V Y L+ + + ++V+ +++ +DM
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKN---NKVKSAVSLMEDM 691
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 34/341 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ K M G ++ +YN L+ C A T A E+ ++ L + G + DV TY+
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL---LESLVSSGFVP-DVVTYTI 441
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IV ALK+ E ML G TP+ IT+++L+ G V++A H+F+EM+
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDY--DGNTDRISNME 483
C ++ L+ ++ + A ++ R AL + Y +G D I N+
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNV- 560
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+D PN TYNI+M C +A + M +
Sbjct: 561 FEDMACRGCVPNI-------------------KTYNIVMDGLCKHGKVDEAFPFLESMHS 601
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ +S+ I+ID + + A Q+L M + G+ PD V Y T + + +R
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARS---RYGSLHEVQQ 639
A + + M + P+ VTY TL+ S R G +E+
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 702
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 148/361 (40%), Gaps = 62/361 (17%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V SL +N D FT+ + G +++ Y IL +A C G A EI+
Sbjct: 166 VIKSLCQMNQIDKAFTM--LDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF----- 218
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ + D Y+ I+ AL+ ++M V P+ T++ LI+ A
Sbjct: 219 ---RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS 275
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++A + EM+ G P++ N ++ +A +F+RA L
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL----------------- 318
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYY 530
++ M ++ +P+ TYN L+ C +
Sbjct: 319 ------LAVMAERN------------------------CRPSCCTYNTLISGLCKQQNVD 348
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R K L++E + G P+ ++++IL D G ++ A +++K M G +P++V Y T I
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + ++A+ L E + P++VTY ++ + G L + L + + M K
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL---DKALKMVEGMLKR 465
Query: 651 G 651
G
Sbjct: 466 G 466
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 135/583 (23%), Positives = 236/583 (40%), Gaps = 91/583 (15%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + L K + E+ ++ES+V S G V +++ ++ G+ K EGR+D +
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLV-SSGFV---PDVVTYTIIVDGLCK---EGRLDKAL 456
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
+++ + + G P V + LME L +DE
Sbjct: 457 KMVEGMLKRGCTP-----------------------SVITYTALMEGL----CRTGRVDE 489
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
I + V+K A+ Y +V +C R + + +V +R +
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNG----YCKSSRT-KEAQKVVDGIRG---------T 535
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P + + ++D G C G + ++ED+ + NI +N +M+ +
Sbjct: 536 PYIDVYNALMD--GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 593
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++M G + D+ SYNI++ A A+++ ++ + + D TY+T+
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM----IQAGIPPDAVTYNTL 649
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + + A+ + ++M+ AGV P+ +T+++LI+ + + A L EML+ GC
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709
Query: 430 EPNSQCC---NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-------DRI 479
S C I+ + C E C +A L T G + NT DR+
Sbjct: 710 VV-SACTTYNTIIDRLCKEGC-LKQALLLMDHMT--------GHGVEANTVTYNIFIDRL 759
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
D+ S S S D TT L KA D R L EM
Sbjct: 760 CKEGRLDEAS----------SLLSEMDTLRDEVSYTTVIIGLCKAEQLD--RASKLAREM 807
Query: 540 RTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
V GL ++ +LIDA + ++ AL +L +M + G SP V+ Y I + +
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +A+ LF+EM I + V+Y L+ G E Q L
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 141/349 (40%), Gaps = 73/349 (20%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
+D LE K M + V D+ +YNIL+ C A T A E+ E
Sbjct: 240 NDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE------------- 286
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
M+ GVTP+T+T++S+++ AG E+A L
Sbjct: 287 --------------------------MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320
Query: 423 EMLQAGCEPNSQCC--NILLQACVEACQFDRAFRL--------FRSWTLSKTQVALGEDY 472
M + C P+ CC N L+ + DRA L F ++ + +A G
Sbjct: 321 VMAERNCRPS--CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
G D + K+ TPN V TYN L+ C
Sbjct: 379 RGRIDEAFELV-KEMSGKGCTPNLV-------------------TYNTLIDGLCKASKTE 418
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA L+ + + G P+ +++TI++D G ++ AL++++ M + G +P V+ YT +
Sbjct: 419 KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ R+ R+ +A +F+EM + + Y++L+ + E Q+
Sbjct: 479 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 510 SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
FK +T T N ++ + R+ A+ M G +P+ ++ ++I + ++ A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+L + G P+V YT + ++ RLK A +F + P+ + Y ++
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHG 235
Query: 628 RSR 630
R
Sbjct: 236 HCR 238
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 33/367 (8%)
Query: 294 FNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN+L+N +N LK L + ++ LG D SY L+ C G T A ++ +
Sbjct: 132 FNTLINGICLNG-KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQM---L 187
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E K ++ DV Y+ I+ K A ++ +M++ ++P+ +T++SLI
Sbjct: 188 KKIEGK-LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +++A LF EM+ P+ +IL+ A + RA K +A+
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA----------KNMLAVMM 296
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D ++ D + N N H S R P +YNI++
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVN--KAKHVFSTMSRLGVAPHAHSYNIMINGLG---- 350
Query: 531 RVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
++K +L EM G++P+ +++ LID G + A Q++ M +G+ D++
Sbjct: 351 KIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADIL 410
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + I V ++ + +A +L +++K IQP++ TY L+ + G L Q V+
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD---VF 467
Query: 645 QDMWKAG 651
QD+ G
Sbjct: 468 QDLLIKG 474
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 24/377 (6%)
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
RT+I+ G+C G+ + + + + + V ++ ++N ++N D + ++Y M
Sbjct: 168 RTLIN--GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEM 225
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ D+ ++N L+ C+ G +E +G + K + DV+T+S +V
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQL---KEAFGLFHEMVLKNI-NPDVYTFSILVDALCK 281
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + M+ GV P+ +T+SSL++ V +A H+F M + G P++
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHS 341
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
NI++ + D A LF+ K Y+ D + + I+
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMC-CKGIAPDTVTYNSLIDGLCKL-----GRISYAWQ 395
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
V H + TYN L+ C +++ + AL+ +++ G+ P+ ++ I
Sbjct: 396 LVDEMHNNGI------PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G ++ A + + + G S + Y I + +A L +M++
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509
Query: 614 IQPNLVTYITLLRARSR 630
I P+ VTY T++RA R
Sbjct: 510 IIPDAVTYETIIRALFR 526
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 27/357 (7%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH-LEAKGVL 359
N D+ + + M ++ + +N +L + A N I + H LE KG+
Sbjct: 34 NDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI--SLSHQLELKGIT 91
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ T++ +V + A + +L G P TIT+++LIN G +++A+H
Sbjct: 92 P-TIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH 150
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQVALGEDYDGNTD 477
+ ++ G + L+ + + A ++ + L T V + +
Sbjct: 151 FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVM-------YN 203
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSS-FDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
I N KDK ++++ YS KR S P T+N L+ C
Sbjct: 204 IIINSLCKDK-AVSDAYQL-----YSEMITKRIS--PDVVTFNSLILGFCVVGQLKEAFG 255
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L +EM ++P+ +++IL+DA GN+ A +L +M + G+ PDVV Y++ +
Sbjct: 256 LFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC 315
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A +F M + P+ +Y ++ G + V + L+++++M G
Sbjct: 316 LVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING---LGKIKMVDEALSLFKEMCCKG 369
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++++++ + + + +NSL++ + + ++ M G+ AD+ +YN L+
Sbjct: 357 EALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C N + + I VK ++ +G+ + ++TY+ ++ + A V +D+L
Sbjct: 417 DVLC--KNHHIDKAI-ALVKKIKDQGI-QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G + N T++ +IN GL +A L +M G P++ +++A + ++
Sbjct: 473 KGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532
Query: 452 AFRLFRSWTL 461
A +L R +
Sbjct: 533 AEKLLREMII 542
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI------LMKACCTDYYRVKALMNEMRTVG 543
I + +F N+ SSF + +PT + ++KA Y +L +++ G
Sbjct: 30 IPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKG 89
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P +++ IL++ G + A I + + G P + + T I + +LK+A
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + + V+Y TL+ + G Q L
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 31/299 (10%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L+A+ L+++TY+ ++KV + W+++ ++ EDM++AG+ P+ IT+S+LI+
Sbjct: 31 KWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANR 90
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-----WTLSKTQ 465
+ AM F+ M A C P++ + ++ + ++D A L+ S W K
Sbjct: 91 CNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVT 150
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK 523
G IS + S FD K +P + YNI++
Sbjct: 151 YGTMVRLFGRAGYIS-------------------AAVSIFDEMKGSGIQPGSVVYNIMI- 190
Query: 524 ACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+C R+ + EM+ G+ PN ++ + +++ SG V L I MR+D ++
Sbjct: 191 SCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQD-LA 249
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D++ Y IK+C + + +A EM Y QPN TY ++ ++ G E Q+
Sbjct: 250 CDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQR 308
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 151/365 (41%), Gaps = 64/365 (17%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
QN LNIY +N ++ V + + ++ ++M G+ D +Y+ L+ +C N
Sbjct: 37 QNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLI-SCANRCNYQD 95
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + + H +A+ V D TYST++ V+ + A+ + E + +G P+ +T+
Sbjct: 96 AAMAWFDRMH-DAQCVP--DAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYG 152
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+++ AG + A+ +F+EM +G +P S NI++ A + A ++F+
Sbjct: 153 TMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEM--- 209
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
K+ KP T + +M
Sbjct: 210 --------------------------------------------KQAGVKPNAVTLSTVM 225
Query: 523 KACCTDYYRVKALM------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ Y R +M + MR L+ + I + +I C +G V A Q L+ M E
Sbjct: 226 EI----YSRSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAGLVPEAEQYLREMVE 280
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P+ Y I + ++ +A +F ++ QP++++Y +LL+ +
Sbjct: 281 YGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
Query: 637 VQQCL 641
VQ+ L
Sbjct: 341 VQEIL 345
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + VR FG+ + +A+ +D K P + +I G G + ++++
Sbjct: 149 VTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQE 208
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ V N +++M + + K L ++ +M++ + D+ YN ++K C AG
Sbjct: 209 MKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAG- 266
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L E ++ + G D +TY ++ ++A A ++ ++ AG P+ +
Sbjct: 267 --LVPEAEQYLREMVEYGHQPND-WTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVM 323
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++SL+ NA E+ + EM+ A C P+ + ++L ++AC D F + RS
Sbjct: 324 SYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILN-LLDACDTDVEFEILRS 381
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP A + + + +GK A+ Y++ KK P+ T++ + G G +
Sbjct: 110 VPDA-VTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAV 168
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+I+++++ + V+N +++ A + L+V++ M++ GV + + + +++
Sbjct: 169 SIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIY 228
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G + E G H+ L D+ Y+ ++K+ +A A + +M+ G
Sbjct: 229 SRSGKVM---EGLGIFHHMRQD--LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGH 283
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
PN T+ ++I+ A G+ +A +F ++++AG +P+ LLQ A +++
Sbjct: 284 QPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
QI + M G+ PD + Y+T I R A + F+ M Q P+ VTY T++
Sbjct: 64 QIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDV- 122
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
YG + + + +A+Y+ + K+G
Sbjct: 123 --YGKVGKYDEAVALYESVKKSG 143
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 202/487 (41%), Gaps = 55/487 (11%)
Query: 197 IVQLCVNKPDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
++ CV + ++ A+R +C V ++ V+ + K+ LVSAL +D ++
Sbjct: 320 VIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
SPN +I+ C G+ K+ +Y ++++N+ +++ NSL+ +E
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRG-----FLKVES 434
Query: 312 YKNMQKL---GVMADMA---SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ KL V D+A +YN LL C G A ++ + + KG+ V +
Sbjct: 435 REEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLW---QKMLDKGLAPTKV-S 490
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ MA V DML G+ PN IT+S L++ G E A ++F+ M+
Sbjct: 491 YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV 550
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ NI + + + A + + + + K V + Y+ D E
Sbjct: 551 DENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF-VEKGFVPVCLTYNSIMDGFIK-EGS 608
Query: 486 DKQSITN---------TPNFVPNSHYSSFDKRFSFKPTT-------------------TT 517
++T +PN + Y++ F T
Sbjct: 609 VSSALTAYREMCESGVSPNVIT---YTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAA 665
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ C D L +E+ GLSPN + + LI N+E AL + K M
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+G+S D+ YTT I ++ RL A L+ EM I P+++ Y L+ G L
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785
Query: 636 EVQQCLA 642
Q+ LA
Sbjct: 786 NAQKILA 792
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 28/378 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ + +++ D+ + N+ ++ LM+ D ++ V+ M +
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YNI + C G T AQ++ +K KG + + TY++I+ F
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDM---LKKFVEKGFVPV-CLTYNSIMDGFIKEGSVS 610
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL +M +GV+PN IT+++LIN + A+ + EM G E + L+
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + A SW S E DG S + + N N
Sbjct: 671 DGFCKKQDIETA-----SWLFS-------ELLDGGLSPNSVIYNSLISGYRNLNNM---E 715
Query: 501 HYSSFDKRFSFKPTT---TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
+ KR + + TY L+ + V AL +EM G+ P+ I +T+LI
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G G +E A +IL M D ++P+V Y I ++ L++AF L EM +
Sbjct: 776 NGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835
Query: 616 PNLVTYITLLRARSRYGS 633
PN TY L+ + + G+
Sbjct: 836 PNDTTYDILINGKIKGGN 853
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 28/359 (7%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EVY+ M GV D + +I+++A N A++ + E K ++GV KLD YS +
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAK---SRGV-KLDAAAYSIV 285
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ F ++A + +DM G P+ T++S+I AC G + +A+ L +EM+ G
Sbjct: 286 IQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGV 345
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW-----TLSKTQVALGEDY---DGNTDRISN 481
+ N L++ + + A F + ++ A+ ++ +GN + +
Sbjct: 346 QMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYD 405
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT--------------TYNILMKACCT 527
+ + K F+ NS F K S + + TYN L+ C
Sbjct: 406 LYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCK 465
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ +A L +M GL+P +S+ +I GN++ A + M + G+ P+V+
Sbjct: 466 EGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVIT 525
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y+ + ++ + AF +F+ M I P+ TY + + G E Q L +
Sbjct: 526 YSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF 584
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 162/380 (42%), Gaps = 29/380 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
KSR + D + ++ + + N D++ + K+M+ G + ++ ++ A
Sbjct: 271 KSRGVKLDAAAYSIVIQAFCKN-------LDVELACGLLKDMRDKGWVPSEGTFTSVIGA 323
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C GN V A + E + + GV +++V +T+VK + AL+ + M G
Sbjct: 324 CVKQGNMVEALRLKDE---MVSCGV-QMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+PN +T++ LI C G + +A L+ +M P N L++ ++ + A
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS 439
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+LF + + N+ +S + + K S T DK + P
Sbjct: 440 KLFD----EAVACDIANIFTYNS-LLSWLCKEGKMSEATT------LWQKMLDKGLA--P 486
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T +YN ++ C + ++ ++M GL PN I+++IL+D +G+ E A +
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M ++ + P Y I + R +A + ++ P +TY +++ +
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
GS V L Y++M ++G
Sbjct: 607 GS---VSSALTAYREMCESG 623
>gi|168038568|ref|XP_001771772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676903|gb|EDQ63380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 614
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 177/412 (42%), Gaps = 36/412 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL Y+A K P++ T+I C + I ++ + V ++ + +LM
Sbjct: 203 ALSIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMA 262
Query: 300 V------------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ A L+ L++Y+ MQ + D +YN L+ A A EIY
Sbjct: 263 LVVKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIY 322
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + A GV D FT+S I++ A ++AL+V E+M +AGV P T T++ LI A
Sbjct: 323 ---RTMVAAGVPP-DQFTFSFILESAAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEA 378
Query: 408 CANAGL--VEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
CA+A E+A LFEEM G PN+Q N L+ A + RA + + S
Sbjct: 379 CASAPYPDAEKAWALFEEMKTIEGVVPNAQTYNHLITASCKGGDNARALKAYELMWNSGY 438
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILM 522
Q A+ + +K QS + T S + K +KP TY+ L+
Sbjct: 439 QRAV----------TTATFNKLIQSASQTEGL--ESALKMYRKMLDAGYKPDAITYSTLV 486
Query: 523 KAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
AC D + ++ EM +G+ PN + LI A G +G E A+ ++++E
Sbjct: 487 VACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWEDAVATFRVLQEGEEQ 546
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
V+Y+ C K +A + +I P + I L S +G
Sbjct: 547 LTSVSYSIIFDACF-GKGGAEAVLKRTKPGKLEIHPGVEAAIGLYNEASEFG 597
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 161/366 (43%), Gaps = 55/366 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L +Y+ M+ GV+ + +YN L+ C A A I E +EA GV K DV TY+
Sbjct: 204 LSIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAE---MEASGV-KPDVVTYTA 259
Query: 369 IVKVF----------ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ + + A+ + AL++ ++M + P++IT+++L+ A A A + E+ +
Sbjct: 260 LMALVVKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVL 319
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++ M+ AG P+ + +L++ + A +F R
Sbjct: 320 EIYRTMVAAGVPPDQFTFSFILESAAAGGRLKVALEVFEEM------------------R 361
Query: 479 ISNMEHKDKQSITNTPNFV----PNSHYSSFDKRFSF----------KPTTTTYNILMKA 524
+ + K TNT NF+ ++ Y +K ++ P TYN L+ A
Sbjct: 362 AAGVAPK-----TNTFNFLIEACASAPYPDAEKAWALFEEMKTIEGVVPNAQTYNHLITA 416
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTI--LIDACGGSGNVEGALQILKIMREDGMS 580
C +AL M G + T LI + + +E AL++ + M + G
Sbjct: 417 SCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLESALKMYRKMLDAGYK 476
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD + Y+T + C R+ L+QA S+ +EM+ ++PN V +L+ A + G +
Sbjct: 477 PDAITYSTLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWEDAVAT 536
Query: 641 LAVYQD 646
V Q+
Sbjct: 537 FRVLQE 542
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 526 CTDYYRVKALMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
C+ ++NEM+ G+ + N ++ LI C + AL I + M++ G+ P V+
Sbjct: 161 CSSLSEALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDAGVIPSVL 220
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA-------RSRYGSLHEV 637
Y T I C ++KRL+ A+ + EM+ ++P++VTY L+ R R +
Sbjct: 221 TYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMALVVKTGPYRGRSSPAQRL 280
Query: 638 QQCLAVYQDM 647
++ L +YQ+M
Sbjct: 281 EKALQLYQEM 290
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 26/381 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y ++Y+ + S + N Y N L+N H L F V ++ KLG A++
Sbjct: 70 YSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTT 129
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L++ C+ G A +++ + + +G + DV TY T++ A++ M
Sbjct: 130 LIRGLCVEGKIGEALQLFDK---MTGEG-FQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
P + +S++I++ + +A+ LF +ML G PN+ + L+ +
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD---KQSITNTPNFVPNSHYSSFD 506
A RLF + K D+++ D K+ + ++V + S
Sbjct: 246 KEAIRLFYAMIHRKIM----------PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS-- 293
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP TYN LM C ++ + + + M G P+ IS+T LI+ +
Sbjct: 294 ---DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIM 350
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A+ + + M + G+ PD V Y T I RL+ A +LF EM Y P+LVTY L
Sbjct: 351 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 410
Query: 625 LRARSRYGSLHEVQQCLAVYQ 645
+ L E L V +
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIE 431
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 172/420 (40%), Gaps = 64/420 (15%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNS 296
+A+R + ++ P + + TIID +C D + A+ + D+ ++ ++ N + ++S
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIID--SLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 234
Query: 297 LMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L++ + H K + ++ M +M D ++N L+ A C G V A V +
Sbjct: 235 LIHGLCILGH-WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHY----VVDV 289
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
+ LK DV TY++++ + V + M+ G P+ I++++LIN +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+++AM LFEEM Q G P++ N L+ + A LF V G+
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM------VVYGQ--- 400
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
P TY IL C ++ +
Sbjct: 401 --------------------------------------IPDLVTYRILFDYLCKNHRLAE 422
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+ + L P+ ++I++D +G +E A + + G+ PDV YT I
Sbjct: 423 AMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 482
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L +A LF EM PN TY + R R +E + + ++Q+M G
Sbjct: 483 GLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN---NETLRAIQLFQEMLSRG 539
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ R + D +C ++ + A + + + N+ +I++++ +M+ A +L+
Sbjct: 402 PDLVTYRILFDY--LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ +Y I++ C G A +++GE ++ G + TY+ I
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE---MDENGC-SPNACTYNLI 515
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ F A+++ ++MLS G + + T + L+ ++ GL + + E +Q
Sbjct: 516 TRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 52/398 (13%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG--------- 338
+++ FN L+N H L F V + KLG D + L+K CL G
Sbjct: 98 DLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFH 157
Query: 339 NTVLAQEIY-----------GEVKHLEAKGVLKL-----------DVFTYSTIVKVFADA 376
+ V+A+ + G K E + L++ +V Y+TI+
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K A + +M+ + P+ +T+++LI C G +++A+ LF +ML +P+
Sbjct: 218 KLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTF 277
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSITNTPN 495
NIL+ + + +A + V + + D N ++ M+ N
Sbjct: 278 NILVDGLCKEGEMKKARNVL--------AVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
FV N+ R P +Y+I++ C +A L EM + ++PN +++
Sbjct: 330 FVFNTM-----ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNS 384
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID G + A ++ M G DV+ Y++ + ++ ++ +A +L ++K
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
IQPN+ TY L+ + G L + Q AVYQD+ G
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQ---AVYQDLLIKG 479
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 167/405 (41%), Gaps = 68/405 (16%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK-------SRAIYEDLRS 284
G+ R + LR D L PN+ + TIID +C D + S I + +
Sbjct: 183 GETRAALQVLRKIDGL---LVQPNVVMYNTIID--SLCKDKLVIHASDLCSEMIVKRIFP 237
Query: 285 QNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
VT ++ L+ LK + ++ M + D+ ++NIL+ C G A+
Sbjct: 238 DVVTYTTLIYGCLI---VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + K + ++ TY++++ + K A V M GVTP+ ++S +
Sbjct: 295 NVLA----VMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
IN +V++A++LF+EM PN+ N L+ + + R+ +W
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL------KYGRISDAW----- 399
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D ++ M ++ + + TY+ L+ A
Sbjct: 400 ------------DLVNEMHNRGQPA------------------------DVITYSSLLDA 423
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C ++ KA L+ +++ G+ PN ++TIL+D +G ++ A + + + G D
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V Y + + +A SL +M+ P+ VTY TL+RA
Sbjct: 484 VKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRA 528
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 62/329 (18%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E K + + D+FT++ ++ F A V + G P+T+T ++LI
Sbjct: 88 KQMELKQI-QPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCL 146
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQVAL 468
G V +A+H ++++ G + L+ + + A ++ R L + V +
Sbjct: 147 NGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVM 206
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---PTTTTYNILMKAC 525
Y+ D + KDK I H S K P TY L+ C
Sbjct: 207 ---YNTIIDSLC----KDKLVI----------HASDLCSEMIVKRIFPDVVTYTTLIYGC 249
Query: 526 CTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED----- 577
R+K L N+M + P+ ++ IL+D G ++ A +L +M +
Sbjct: 250 LI-VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN 308
Query: 578 ------------------------------GMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
G++PDV +Y+ I ++K + +A +LF+
Sbjct: 309 IVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFK 368
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM + PN VTY +L+ +YG + +
Sbjct: 369 EMHSKSMAPNTVTYNSLIDGLLKYGRISD 397
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 263 IDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I + G+C M A+ ++++ S+++ N +NSL++ + + ++ M
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G AD+ +Y+ LL A C A + ++K +G+ + +++TY+ +V
Sbjct: 409 GQPADVITYSSLLDALCKNHQVDKAITLITKIKD---QGI-QPNIYTYTILVDGLCKNGR 464
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A V +D+L G + ++ ++N GL ++A+ L +M GC P++
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYET 524
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
L++A E + D+A +L R + + A+G + N+
Sbjct: 525 LVRALFENDKNDKAVKLLREMIVQGS--AVGSNISSNS 560
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 504 SFDKRFSFK---PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
SF K+ K P T+NIL+ C + A ++ ++ +G P+ ++ T LI
Sbjct: 85 SFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGL 144
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G V AL + G D V+Y T I ++ + A + ++ +QPN+
Sbjct: 145 CLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNV 204
Query: 619 VTYITLL 625
V Y T++
Sbjct: 205 VMYNTII 211
>gi|357473771|ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 57/348 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A + +V
Sbjct: 618 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDV 677
Query: 312 YKNMQK--LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M+ ++ D ++ L+KAC AG A+E+Y ++ KG ++ Y+
Sbjct: 678 IAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEV----YTIA 733
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V +DM GV P+ + S+LI+ +A +E A + ++ + G
Sbjct: 734 INSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARKEGV 793
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC +A + RA L+
Sbjct: 794 QIGIMTYSSLMGACSKAKNWQRALELYE-------------------------------- 821
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL ++EM+ +GL PN
Sbjct: 822 ---------------YLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLGLCPN 866
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I+++ILI A ++E A +L ++DG +P ++ I +C+R
Sbjct: 867 SITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRCIIGMCLR 914
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 54/324 (16%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L D Y+T++ +
Sbjct: 550 LSTFNMLMSVCASSQDS----EGAFQVIQLLKDARLDPDCKLYTTLISTCGKCGKVDLMF 605
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI+ CA AG V +A + M + + N L+ AC
Sbjct: 606 EVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAAC 665
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ RAF D I+ ME + Q I
Sbjct: 666 AQSGAMARAF-----------------------DVIAEME-AEIQPIV------------ 689
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
P T+ LMKAC R + + ++ + + +TI I++C +
Sbjct: 690 ---------PDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQT 740
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+ E A + M + G+ PD + + I V +K+L+ AF + ++ + +Q ++TY
Sbjct: 741 GDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARKEGVQIGIMTY 800
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQ 645
+L+ A S+ + Q+ L +Y+
Sbjct: 801 SSLMGACSKAKNW---QRALELYE 821
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R PT +T+N+LM C + ++V L+ + R L P+ +T LI CG G
Sbjct: 543 RLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDAR---LDPDCKLYTTLISTCGKCG 599
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++ + V +
Sbjct: 600 KVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFN 659
Query: 623 TLLRARSRYGSL 634
L+ A ++ G++
Sbjct: 660 ALIAACAQSGAM 671
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 531 RVKALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ KA+ V L PN ++ +L+ C S + EGA Q+++++++ + PD YTT
Sbjct: 531 KQKAVNEAFDYVRLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTT 590
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I C + ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 591 LISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIM 646
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 116/306 (37%), Gaps = 58/306 (18%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +E KG+L + ++ + K A D + P T++ L++ CA
Sbjct: 506 LKDMEMKGLLDMTKVYHAKFFNICKKQKAVNEAF----DYVRLIPNPTLSTFNMLMSVCA 561
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
++ E A + + + A +P+ + L+ C + + D F +F S +
Sbjct: 562 SSQDSEGAFQVIQLLKDARLDPDCKLYTTLISTCGKCGKVDLMFEVFHKMVNSGVE---- 617
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
PN H TY L+ C
Sbjct: 618 ----------------------------PNVH---------------TYGALIDGCARAG 634
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVA 585
KA MR+ + + + + LI AC SG + A ++ M + + PD V
Sbjct: 635 QVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDVIAEMEAEIQPIVPDHVT 694
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ T +K C ++ ++++A +++ ++ Y I+ + Y + + S+ G + +VY
Sbjct: 695 FGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFAR---SVYD 751
Query: 646 DMWKAG 651
DM + G
Sbjct: 752 DMTQKG 757
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 86/373 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY NM+K GV ++ +YN+L++A C A+++ E+ KG DV TY+TIV
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMAR---KGCPPDDV-TYATIV 201
Query: 371 KVF----------------------------ADAKWWQM--ALKVKEDMLSAGVTPNTIT 400
V A + ++M V DM+ G+ PN IT
Sbjct: 202 SVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 261
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++++A AG + A + M+ GC PN L++ + + A ++R W
Sbjct: 262 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR-WM 320
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+++ + P+T +YNI
Sbjct: 321 VAE----------------------------------------------GWAPSTVSYNI 334
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L++ C+ D +++N M G PN +++ LID +G++ GA+ I M G
Sbjct: 335 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
P+VV YT + V + QA SL ++M PN VT+ TL+R+ V
Sbjct: 395 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC---DCRRVG 451
Query: 639 QCLAVYQDMWKAG 651
+ L V+ +M + G
Sbjct: 452 RALGVFHEMRRHG 464
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 172/423 (40%), Gaps = 59/423 (13%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADM 324
CG+ M + Y+++R V N++ +N L+ + + ++ M + G D
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 325 ASYNILLKACC-----------LAGNTVLA----------------QEIYGEVKHLEAKG 357
+Y ++ C LA +A QE++ V + +G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ +V TY+TIV F A +MA + M+ G TPN +T+++L+ + G V A
Sbjct: 255 -LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA------------FRLFRSWTLSKTQ 465
+ ++ M+ G P++ NIL++ A F R+++
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Query: 466 VALGEDYDGNTDRISNMEHKD-KQSITNTPNFVP--------NSHYSSFDKRF--SFKPT 514
+ D G ++M K ++ N V N S DK + P
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T T+N L+++ C D RV + +EMR G PN ++ LI GN AL ++
Sbjct: 434 TVTFNTLIRSLC-DCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ G+ +V Y T + +++ ++A +M IQPN T+ ++ A +
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552
Query: 632 GSL 634
G +
Sbjct: 553 GEV 555
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 26/384 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFT 308
PN+ TI+D G+ + AI + T N+ F +L+ + HD
Sbjct: 257 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD---A 313
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ M G SYNIL++ C G+ A I + +E G +V TYST
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI---LNSMEQHGCFP-NVRTYST 369
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F+ A A+ + DM +G PN + ++++++ + QA L ++ML
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ N L+++ + + RA +F V G Y+ +
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC-VPNGRTYN-----------ELIH 477
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ N H + + + + TYN ++ C +A+ + +M G+ P
Sbjct: 478 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +I A G V A +L M +++ YT + +L A +
Sbjct: 538 NAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYL 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSR 630
+M + I PN VT+ L+R R
Sbjct: 598 LKMLYEGIYPNTVTWNVLVRGVFR 621
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++DV C M +++++ +
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV--FCKKLMFNQAKSLIDK 424
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ + + L V+ M++ G + + +YN L+ GN
Sbjct: 425 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 484
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + V +++ G+ +L + TY+T+V + + A+ M+ G+ PN
Sbjct: 485 CGDALHM---VTEMQSHGI-ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 540
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S++I+A G V A + M C N IL+ E C D+
Sbjct: 541 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM---AELCNQDK 589
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L + MQ G+ + +YN ++ C
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC---Q 516
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T +++E V + +G+ + + FT+S I+ + +MA + M N +
Sbjct: 517 TRMSREAMVFVGKMIVQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ------ACVEACQF 449
++ L+ N + AM +ML G PN+ N+L++ C+E F
Sbjct: 576 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDF 631
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C G V + + MR+DG+ P+V Y ++ ++ R+ A + +EM P+
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
VTY T++ + L E + LA
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLA 218
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 174/390 (44%), Gaps = 36/390 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ T+ID G+C + M A ++E+++ +N+ +I + SL++ H L+
Sbjct: 340 TPNVRTYTTMID--GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + K M++ G+ D+ SY ILL A C G A+E + + L KG L+V TY+
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF---QRLLVKGY-HLNVQTYNV 453
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + A+ +K M G P+ IT+ ++I CA LFE+
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII--CA----------LFEK----- 496
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ N + IL + Q R RL + K +A+ D ++ D
Sbjct: 497 -DENDKAEKILREMIARGLQEARKVRLKEA----KIVLAVMTKACIKPDVVTYGTLMDGY 551
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
+ N YS + P Y I++ C +L EM+ + P
Sbjct: 552 FLVNELKHAKYVFYSM--AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFP 609
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T LIDA + ++E A+ +LK M+E G+ PDV +YT + +S RL+ A +F
Sbjct: 610 NIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIF 669
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + N+ Y ++ + G E
Sbjct: 670 QRLLVKGYHLNVQVYTAMINELCKAGLFDE 699
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 183/420 (43%), Gaps = 34/420 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ T+ID G G ++ + + + ++ +NSL++ + +K
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKY 329
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ +M + GV ++ +Y ++ C A ++ E+K+ K ++ D+ TY++++
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY---KNMIP-DIVTYTSLI 385
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A+ + + M G+ P+ +++ L++A G +E A F+ +L G
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGE-DYDGNTDRI 479
N Q N+++ +A F A L + T AL E D + ++I
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKI 505
Query: 480 ------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYR 531
++ K + + + + KP TY LM +
Sbjct: 506 LREMIARGLQEARKVRLKEAKIVL------AVMTKACIKPDVVTYGTLMDGYFLVNELKH 559
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K + M +G++PN +TI+ID V+ A+ + + M+ M P++V YT+ I
Sbjct: 560 AKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLID 619
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ L++A +L +EMK + IQP++ +Y LL + G L ++ ++Q + G
Sbjct: 620 ALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE---IFQRLLVKG 676
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 150/377 (39%), Gaps = 54/377 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++++ S T ++ N LMN H + F V N+ K G + + N L+K
Sbjct: 84 SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGL 143
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A + +V A+G +L+ +Y T++ + ++ + V
Sbjct: 144 CFRGEIKKALYFHDQV---VAQG-FQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSV 199
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + ++++I++ L+ A L+ EM+ G PN N L+ AF
Sbjct: 200 KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L L N D + N+ + K K
Sbjct: 260 LLNEMKLKNI----------NPDVCTF-----------------NTLIDALGKEGKMKAA 292
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++MKAC + P+ +++ LID V+ A + M
Sbjct: 293 KIVLAVMMKAC------------------IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G++P+V YTT I + K + +A SLFEEMK+ + P++VTY +L+ +
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN--- 391
Query: 635 HEVQQCLAVYQDMWKAG 651
H +++ +A+ + M + G
Sbjct: 392 HHLERAIALCKKMKEQG 408
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 195/473 (41%), Gaps = 66/473 (13%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ + + LR + H P++ + TII +C + + A +Y ++ + ++
Sbjct: 182 GETKAVARLLRKLEG---HSVKPDVVMYNTIIH--SLCKNKLLGDACDLYSEMIVKGISP 236
Query: 290 NIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ +N+L+ + H LK + M+ + D+ ++N L+ A G A+ +
Sbjct: 237 NVVTYNALVYGFCIMGH-LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIV 295
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ K +K DV TY++++ + + A V M +GVTPN T++++I+
Sbjct: 296 LA----VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMID 351
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--------- 457
+V++AM LFEEM P+ L+ + +RA L +
Sbjct: 352 GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 411
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDKRFSFK 512
S+T+ + G + + + K T N + N + F + K
Sbjct: 412 DVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLK 471
Query: 513 ---------PTTTTYNILMKACCTDYYRVKA--LMNEM--------RTVGLSPNHISWTI 553
P T+ ++ A KA ++ EM R V L I +
Sbjct: 472 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAV 531
Query: 554 LIDACGGS---------------GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ AC ++ A + M + G++P+V YT I + K
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKT 591
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A SLFEEMKH + PN+VTY +L+ A + H +++ +A+ ++M + G
Sbjct: 592 VDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKN---HHLERAIALLKEMKEHG 641
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 59/374 (15%)
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNM 315
RT+I+ G+C G+ + L +V ++ ++N++++ + L ++Y M
Sbjct: 172 RTLIN--GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+ ++ +YN L+ C+ G+ +E + + ++ K + DV T++T++
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHL---KEAFSLLNEMKLKNI-NPDVCTFNTLIDALGK 285
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A V M+ A + P+ +T++SLI+ V+ A ++F M Q+G PN +
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
++ + D A LF M++K N
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEE-----------------------MKYK---------N 373
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
+P+ TY L+ C +++ R AL +M+ G+ P+ S+TI
Sbjct: 374 MIPD---------------IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+DA G +E A + + + G +V Y I ++ +A L +M+
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 614 IQPNLVTYITLLRA 627
P+ +T+ T++ A
Sbjct: 479 CMPDAITFKTIICA 492
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T++D + + ++ ++ + VT N+ + +++ + + +
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + ++ +Y L+ A C N L + I +K ++ G+ + DV++Y+ ++
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALC--KNHHLERAI-ALLKEMKEHGI-QPDVYSYTILLD 654
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A ++ + +L G N ++++IN AGL ++A+ L +M GC P
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
++ +I++ A E + D+A ++
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKIL 739
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 495 NFVPNSHYS---SFDKRF---SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ V N HY S K+F P T NILM C T +++ + G P
Sbjct: 72 SLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHP 131
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N I+ LI G ++ AL + G + V+Y T I ++ K L
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
+++ + ++P++V Y T++ +
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHS 212
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 503 SSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+SFD+ +P T+ N ++ + + Y V +L + + G +P+ + IL++
Sbjct: 49 ASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCF 108
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A +L + + G P+ + T IK +C R + +K+A +++ Q N
Sbjct: 109 CHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGE-IKKALYFHDQVVAQGFQLN 167
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
V+Y TL+ + G V + L
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLL 191
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 86/373 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY NM+K GV ++ +YN+L++A C A+++ E+ KG DV TY+TIV
Sbjct: 150 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMAR---KGCPPDDV-TYATIV 205
Query: 371 KVF----------------------------ADAKWWQM--ALKVKEDMLSAGVTPNTIT 400
V A + ++M V DM+ G+ PN IT
Sbjct: 206 SVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 265
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++++A AG + A + M+ GC PN L++ + + A ++R W
Sbjct: 266 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR-WM 324
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+++ + P+T +YNI
Sbjct: 325 VAE----------------------------------------------GWAPSTVSYNI 338
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L++ C+ D +++N M G PN +++ LID +G++ GA+ I M G
Sbjct: 339 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 398
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
P+VV YT + V + QA SL ++M PN VT+ TL+R+ V
Sbjct: 399 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC---DCRRVG 455
Query: 639 QCLAVYQDMWKAG 651
+ L V+ +M + G
Sbjct: 456 RALGVFHEMRRHG 468
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 26/384 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFT 308
PN+ TI+D G+ + AI + T N+ F +L+ + HD
Sbjct: 261 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD---A 317
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++++ M G SYNIL++ C G+ A I + +E G +V TYST
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI---LNSMEQHGCFP-NVRTYST 373
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F+ A A+ + DM +G PN + ++++++ + QA L ++ML
Sbjct: 374 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 433
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ N L+++ + + RA +F V G Y+ +
Sbjct: 434 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC-VPNGRTYN-----------ELIH 481
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ N H + + + + TYN ++ C +A++ +M G+ P
Sbjct: 482 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 541
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +I A G V A +L M +++ YT + +L A +
Sbjct: 542 NAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYL 601
Query: 607 EEMKHYQIQPNLVTYITLLRARSR 630
+M + I PN VT+ L+R R
Sbjct: 602 LKMLYEGIYPNTVTWNVLVRGVFR 625
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/528 (21%), Positives = 204/528 (38%), Gaps = 87/528 (16%)
Query: 163 QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCV----NKPDVNLAIRY----- 213
+RL +G+V+ G+ L+E RL E + + PD L Y
Sbjct: 63 RRLAAAGDVD---GVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 119
Query: 214 -ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
C P L+ + + ++ + + + YD +K PN++ ++
Sbjct: 120 LGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 179
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+R + +++ + + + ++++V L EV M + ASYN +
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA-----ASYNAI 234
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C QE++ V + +G L+ +V TY+TIV F A +MA + M+
Sbjct: 235 VLALC---REFRMQEVFSVVSDMVGRG-LQPNVITYTTIVDAFCKAGELRMACAILARMV 290
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEML------------------------- 425
G TPN +T+++L+ + G V A+ ++ M+
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 350
Query: 426 ----------QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDY 472
Q GC PN + + L+ +A A ++ + S + V
Sbjct: 351 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 410
Query: 473 DGNTDRISNMEHK---DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D ++ + K DK + N P P T T+N L+++ C D
Sbjct: 411 DVFCKKLMFNQAKSLIDKMLLENCP------------------PNTVTFNTLIRSLC-DC 451
Query: 530 YRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
RV + +EMR G PN ++ LI GN AL ++ M+ G+ +V Y
Sbjct: 452 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 511
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
T + +++ ++A +M IQPN T+ ++ A + G +
Sbjct: 512 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 559
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++DV C M +++++ +
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV--FCKKLMFNQAKSLIDK 428
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ + + L V+ M++ G + + +YN L+ GN
Sbjct: 429 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 488
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + V +++ G+ +L + TY+T+V + + A+ M+ G+ PN
Sbjct: 489 CGDALHM---VTEMQSHGI-ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 544
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S++I+A G V A + M C N IL+ E C D+
Sbjct: 545 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM---AELCNQDK 593
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L + MQ G+ + +YN ++ C
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC---Q 520
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T +++E V + +G+ + + FT+S I+ + +MA + M N +
Sbjct: 521 TRMSREAMVFVGKMIVQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 579
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ------ACVEACQF 449
++ L+ N + AM +ML G PN+ N+L++ C+E F
Sbjct: 580 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDF 635
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA V + + MR+DG+ P+V Y ++ ++ R+ A + +EM
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P+ VTY T++ + L E + LA
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLA 222
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 192/434 (44%), Gaps = 65/434 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICR-----TIIDVCGICGDYMKSRAIYED 281
FV+ G++ AL ++ +KH + + R +I+ V G + ++E
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKH----DCFKLRGVATASILSVLGNHEQLPAALELFES 202
Query: 282 LRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
L+ ++ +L++Y + SL+++ + +F + +++ MQ+ G + +YN++L G
Sbjct: 203 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 262
Query: 339 NTV-LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ Q ++ E+K LE + D +TY+T++ Q AL++ ++M AG PN
Sbjct: 263 DSWDRIQSLFQEMKDLE----ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 318
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L++ G+ ++A L EM AG PN N L+ A A D A L +
Sbjct: 319 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 378
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S LSK L D F + S+F++ ++ T
Sbjct: 379 SL-LSK---GLCPD-----------------------EFTYCTLISAFNRAERYEKALET 411
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ EMR +PN +++ ILID G ++ +++ K M+E
Sbjct: 412 FT------------------EMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 453
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+PD+V + + +K L + ++F EMK P + T+ L+ YG V
Sbjct: 454 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC---YGRCGYV 510
Query: 638 QQCLAVYQDMWKAG 651
+ +Y+ + + G
Sbjct: 511 DYSVDIYKGLLRTG 524
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 184/421 (43%), Gaps = 27/421 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ +C + F + AL + +K +PN+ +ID+ G +++
Sbjct: 389 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +N T ++ +NSL+ N L V++ M++ G M + ++NIL++ G
Sbjct: 449 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 508
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +IY K L G L+ V T++ ++ A WQ KV ++M AG+ +
Sbjct: 509 YVDYSVDIY---KGLLRTG-LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 564
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ--CCNILLQACVEACQFDRAFRLF 456
+ LI++ AN+G Q +E+ ++ +P S C +L C C D
Sbjct: 565 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYC--KCGMD------ 616
Query: 457 RSWTLSKTQVALGEDYD-GNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRFSFKPT 514
++ Q+AL + YD G++ I S+ ++ + ++ KP
Sbjct: 617 -----NEAQLALNQLYDNGHSPDIKVFNA--MISMCAKRGWIERAVKLLEEIRKAQLKPD 669
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN LM + YY+ + +M+EMR G +PN I++ L+ + G ++ A ++
Sbjct: 670 GVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFG 729
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + PD + T + K+A S+ E M + QP +T+ LL +R
Sbjct: 730 DMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNA 789
Query: 633 S 633
S
Sbjct: 790 S 790
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 202/486 (41%), Gaps = 75/486 (15%)
Query: 231 FGKKRDLVSALRAYDASKKHLS-SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+GK+ D +++ K L SP+ Y T+I C ++ ++++++
Sbjct: 258 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCP 317
Query: 290 NIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N +N+L++V K E+ M+ G+ ++ +YN L+ A AG L E
Sbjct: 318 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAG---LCDEAA 374
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT------- 400
K L +KG+ D FTY T++ F A+ ++ AL+ +M TPN +T
Sbjct: 375 ALKKSLLSKGLCP-DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDI 433
Query: 401 ----------------------------WSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
W+SL+ + N G++ + ++F EM +AG P
Sbjct: 434 YGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 493
Query: 433 SQCCNILLQACVEACQF-DRAFRLFRSWTLSKTQVALG-----------EDYDGNTDRIS 480
NIL++ C C + D + +++ + Q + E +++S
Sbjct: 494 VDTFNILIE-CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVS 552
Query: 481 ------NMEHKDK------QSITNTPNFVPNSHYSSFDKRFSFKPTT----TTYNILMKA 524
++ D S N+ F Y ++ + +P + T+ +
Sbjct: 553 QEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCK 612
Query: 525 CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
C D + +N++ G SP+ + +I C G +E A+++L+ +R+ + PD V
Sbjct: 613 CGMDN-EAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGV 671
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y + + R +A + EM+ PNL+TY TLL + +++G + + + V+
Sbjct: 672 TYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAAR---VF 728
Query: 645 QDMWKA 650
DM A
Sbjct: 729 GDMVAA 734
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 294 FNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F+SL+N + KF +E + M G ++ +YN ++K C G T +A G +K
Sbjct: 157 FSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA---VGLLK 213
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
++ G + D+ Y+TI+ + AL + ++ GV P+ T+S L++ N+
Sbjct: 214 KMDKAGG-RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNS 272
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
E+A LF EM+ P+ NIL+ +L + LS+ Q
Sbjct: 273 DQKEEASALFNEMMSLNIMPDVVTFNILVD------------KLCKEGMLSEAQ------ 314
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSH---YSSFDKRFSFK--------PTTTTYNI 520
I M K + T N + N + F+ R F P +YNI
Sbjct: 315 -----GIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C + L +EM GL PN ++ LI +G A ++ K M+ G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
SPD+V T + + L A LF M+ ++PNLVTY L+RA + G ++
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 68/335 (20%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVF ++ ++ F+ + A V ++ G P+ +T+SSLIN +AM F
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM+ +G +PN N +++ + + KT VA+G ++
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCK---------------IGKTTVAVGL-----LKKMDK 217
Query: 482 MEHKDKQSITNT--PNFVPNSHYSSFDKRFS------FKPTTTTYNILMKACCTDYYR-- 531
+ I NT + S FS +P TY+ILM C +
Sbjct: 218 AGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE 277
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS----------- 580
AL NEM ++ + P+ +++ IL+D G + A I+KIM E G+
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN 337
Query: 581 ------------------------PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
P+VV+Y I +++R+ +A LF+EM + P
Sbjct: 338 GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIP 397
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
N Y TL+ + G E ++ +++DM G
Sbjct: 398 NTFNYNTLISGLCQAGRHCEARE---LFKDMQAQG 429
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 50/274 (18%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYED 281
FC + GK V L+ D K P++ I TIID G+C D + S A I+ +
Sbjct: 199 FC----KIGKTTVAVGLLKKMD---KAGGRPDIVIYNTIID--GLCKDRLVSEALDIFSE 249
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + V +++ ++ LM+ N+ + ++ M L +M D+ ++NIL+ C G
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEG- 308
Query: 340 TVLAQEIYGEVKHLEAKGV---------------LKLDVF-------------------T 365
+ E G +K + KGV L+ VF +
Sbjct: 309 --MLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVS 366
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ + A+ A ++ ++M G+ PNT +++LI+ AG +A LF++M
Sbjct: 367 YNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQ 426
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
GC P+ C ILL + + D A RLFR+
Sbjct: 427 AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 268 ICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMAD 323
+C + M S A I + + + V N +NSLMN K V+ M G M +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYNIL+ C A A+E++ E + +G++ + F Y+T++ A A
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDE---MSFRGLIP-NTFNYNTLISGLCQAGRHCEAR 419
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ +DM + G +P+ +T + L+++ G ++ A+ LF M + +PN +IL++A
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 506 DKRFSFK--------PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILI 555
D FSF P ++ L+ A Y V +L + + + + + ILI
Sbjct: 67 DALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILI 126
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ V+ A +L + + G PD V +++ I + +A F+EM Q
Sbjct: 127 NCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PNL TY T+++ + G + + + + M KAG
Sbjct: 187 PNLHTYNTIIKGFCKIG---KTTVAVGLLKKMDKAG 219
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 168/408 (41%), Gaps = 66/408 (16%)
Query: 245 DASKKHLSS----PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
DA+++ ++S P+ Y II G+C G + A+ +D+ + ++ + L+
Sbjct: 126 DAARRLIASMPVPPDAYTYTPIIR--GLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLL 183
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
F + V M+ G ++ +YN+++ C G A+EI + L +
Sbjct: 184 EAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI---LNRLSSY 240
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D+ +Y+T++K A+ W + +M+ PN +T+ L+ G+VE+
Sbjct: 241 G-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + ++M Q GC PN+ CNI++ A + + D A+
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY----------------------- 336
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKA 534
D ++NM + P T +Y +++ C + K
Sbjct: 337 DFLNNM------------------------GMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ EM PN +++ I G +E A++++++M E G S +V Y +
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R+ A LF + +PN +TY TLL L + LA
Sbjct: 433 VQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLA 477
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 142/331 (42%), Gaps = 41/331 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G + NI++ A C G + Y + ++ G D +Y+T
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRV---DDAYDFLNNMGMYGC-NPDTISYTT 356
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ A W+ A ++ +M+ PN +T+++ I GL+EQA+ L E M + G
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFR---------SWTLSKTQVALGEDYDGNTDR 478
C N L+ CV+ + D A LF ++T T + E D +
Sbjct: 417 CSVGIVTYNALVHGFCVQG-RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ M KD T+N+L+ C + +A L+
Sbjct: 476 LAGMIQKD------------------------CPLNAVTFNVLVSFFCQKGFVEEAMELV 511
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G +PN I++ L+D N E AL++L + G+S D + Y++ + V R
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 571
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R ++A + ++ ++P + Y +L A
Sbjct: 572 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 180/461 (39%), Gaps = 40/461 (8%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP + +R + + AL D + P++ +++ + ++
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++R++ T NI +N ++N + + E+ + G D+ SY +LK
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDV---FTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A + +VK L A+ V K V T+ +V+ F + A++V + M
Sbjct: 257 C-------AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TPNT + +INA G V+ A M GC P++ +L+ A +++
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369
Query: 452 AFRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---- 492
A L F ++ Q L E + + E+ I
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP--EYGCSVGIVTYNAL 427
Query: 493 TPNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSP 546
F S + F+ +P T TY L+ C R+ A L+ M
Sbjct: 428 VHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLC-HAERLDAAAELLAGMIQKDCPL 486
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ +L+ G VE A++++ M E G +P+++ + T + + ++A L
Sbjct: 487 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 546
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + + +TY +++ SR E Q L QDM
Sbjct: 547 HGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 232
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL + G PD+V+YTT +K ++R LF EM + PN VT+ L+R
Sbjct: 233 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
R G V++ + V Q M + G
Sbjct: 293 RGGM---VERAIQVLQQMSQHG 311
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 156/399 (39%), Gaps = 60/399 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC------------- 266
++ F VR F + + A++ +H +PN +C +I+ +C
Sbjct: 281 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 340
Query: 267 -------------------GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
G+C G + ++ + ++ +N N FN+ + +
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 400
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ +++ + M + G + +YN L+ C+ G A E++ + + +
Sbjct: 401 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-------CEPNT 453
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ A+ A ++ M+ N +T++ L++ G VE+AM L +
Sbjct: 454 ITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 513
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNM 482
M++ GC PN N LL + C + A L L V+L Y D +S
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG--LVSKGVSLDTITYSSVVDVLSR- 570
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
E + +++I + +P YN ++ A C +A+ M
Sbjct: 571 EDRTEEAI----------QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 620
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ G PN ++ ILI+ G ++ A +L + G+
Sbjct: 621 SNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
YN L+ C Y R+ A + ++ + P+ ++T +I G V AL +L M +
Sbjct: 112 YNTLVAGYCR-YGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P VV YT ++ +S +A ++ +EM+ PN+VTY ++ R G + +
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 638 QQCL 641
++ L
Sbjct: 231 KEIL 234
>gi|299116347|emb|CBN76149.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 171/442 (38%), Gaps = 110/442 (24%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL---------------- 305
++ C G + + ++ ++ VT FN+++ H
Sbjct: 499 VLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREA 558
Query: 306 ---KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
LE+ +M++ GV D+ +YN L+ G A EI + G ++ D
Sbjct: 559 PRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPD 618
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL-- 420
V TY++ + A + A ++ +M G+ P+ +++S I+AC+ AG E+A+ L
Sbjct: 619 VITYNSAIAACASGGESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLR 678
Query: 421 ---------------------------------FEEMLQAGCEPNSQCCNILLQACVEAC 447
+EM G PN + +QAC
Sbjct: 679 AMEASNVVPDVIAMTACMDALAAGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGG 738
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q+ RA L +S +E++ +
Sbjct: 739 QWQRALEL-----------------------LSRLENRASGA------------------ 757
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT----VGLSPNHISWTILIDACGGS 561
T YN M AC T + R AL+ +M+ V P+ +++T I AC +
Sbjct: 758 ------TVQEYNCAMMACVTGGESGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSST 811
Query: 562 GNVEGALQILKIMREDG--MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL +L MRE G P++ +YT AI C R+++ ++A +L ++ + P+
Sbjct: 812 GKWDRALSLLDEMREAGPRTQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPA 871
Query: 620 TYITLLRARSRYGSLHEVQQCL 641
++ ++RA +R G H++ L
Sbjct: 872 SFNAVIRA-ARRGGQHKLSMKL 892
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 161/402 (40%), Gaps = 57/402 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN----VTLNIYVFNSLMNV--NAHDLKF 307
P++ ++I+V G ++ I + + ++ V ++ +NS + + + K
Sbjct: 578 PDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPDVITYNSAIAACASGGESKK 637
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ M++ G+ D SY + AC AGN +E ++ +EA V+ DV +
Sbjct: 638 ASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNP---EEALRLLRAMEASNVVP-DVIAMT 693
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ A W A+ + ++M S GVTPN T+ + I AC G ++A+ L +
Sbjct: 694 ACMDALAAGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENR 753
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
Q N + ACV + RA L +K V G
Sbjct: 754 ASGATVQEYNCAMMACVTGGESGRALALLEQMKANKGGVNAG------------------ 795
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG-- 543
P TY + AC + + R +L++EMR G
Sbjct: 796 -------------------------PDMVTYTSAIMACSSTGKWDRALSLLDEMREAGPR 830
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN S+T I ACG + E A+ + + E+GMSPD ++ I+ R + K +
Sbjct: 831 TQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSM 890
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
L M + P+ VT L+ + S G + Q+ + + +
Sbjct: 891 KLLASMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVEIAE 932
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 83/371 (22%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH--------------LE 354
L V + M + GV + ++N +L A ++ + G K +E
Sbjct: 513 LSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREAPRWPMALELLADME 572
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM----LSAGVTPNTITWSSLINACAN 410
+GV + DV TY++++ V AL++ + M + GV P+ IT++S I ACA+
Sbjct: 573 RRGV-EPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPDVITYNSAIAACAS 631
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G ++A L EM + G +P+ + AC +A + A RL R+ S
Sbjct: 632 GGESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLRAMEAS-------- 683
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC----- 525
N VP+ I M AC
Sbjct: 684 ------------------------NVVPDV-------------------IAMTACMDALA 700
Query: 526 -CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +++EMR+ G++PN ++ I ACG G + AL++L + V
Sbjct: 701 AGGKWSEAITILDEMRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQ 760
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQ----IQPNLVTYITLLRARSRYGSLHEVQQC 640
Y A+ CV +A +L E+MK + P++VTY + + A S G +
Sbjct: 761 EYNCAMMACVTGGESGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKW---DRA 817
Query: 641 LAVYQDMWKAG 651
L++ +M +AG
Sbjct: 818 LSLLDEMREAG 828
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN + I CG G + ++ + L R+ T+ Y + V + L
Sbjct: 721 TPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGESGRALA 780
Query: 311 VYKNMQ--KLGVMA--DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + M+ K GV A DM +Y + AC G A + E++ EA + ++ +Y
Sbjct: 781 LLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMR--EAGPRTQPNIRSY 838
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ + A+ W+ A+ + +L G++P+ +++++I A G + +M L M++
Sbjct: 839 TAAIAACGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSMKLLASMVE 898
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLF 456
AG P+ L+ + + ++D A R+
Sbjct: 899 AGLTPDGVTVGELISSLSDRGRWDDAQRVV 928
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 112/291 (38%), Gaps = 25/291 (8%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS---AGVTPNTITWSSLINACANAGLVE 415
L+ D+ Y T++K ++ + AL + M + AG+ + S+ ++AC+ A E
Sbjct: 298 LQADLDDYKTVLKGYSANRKQGKALFTVQTMSAVQQAGLVADIEMLSAAMDACSKARDTE 357
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA----LGED 471
A+H ++ ++ G +P+ + A A ++ A L W A G D
Sbjct: 358 GAVHFMDQAIRLGLKPDDTMFREAILAYSLAGKWVEARDLALQWRGQAPSPASSSTPGGD 417
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
G + ++ NT D+ ++ T +
Sbjct: 418 GGGAVSVGLGISRPPPPTVCNTAILKAMGKAGKVDEAIAWLGDTYDAATATATAASGAGT 477
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ +R + +H S+ ++ AC +G AL +L+ M G++P+ VA+ T +
Sbjct: 478 TEDEQGSVRGF-VCLDHSSFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLA 536
Query: 592 VCV-----------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ R A L +M+ ++P++VTY +L+
Sbjct: 537 AFEHRAHSGGSSSGGGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLI 587
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A + M PN++ Y ++ + G E + +++ ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 138/375 (36%), Gaps = 81/375 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
C + + EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLL-- 531
Query: 637 VQQCLAVYQDMWKAG 651
QQ + +M + G
Sbjct: 532 -QQARKWFDEMVRDG 545
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 173/430 (40%), Gaps = 38/430 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R + SA ++ PN+ +ID G K+ IY
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 282 LRSQ----NVTL------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+R +V + NI+ + +L++ AH +K ++ M G +
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQ ++ + + +G +V+TYS+++ K +AL
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML PN I ++ +I+ G ++A L M + GC PN ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+A + D+ L R A G + T R+ + H + ++H
Sbjct: 787 GKAGKVDKCLELMRQMG------AKGCAPNFVTYRVL-INH------CCAAGLLDDAHQL 833
Query: 504 SFDKRFSFKPT-TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + ++ P Y +++ ++ L++E+ P ++ ILID+ +G
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Query: 563 NVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL++ K M + D Y++ I+ + ++ +AF L+ +M P L
Sbjct: 894 RLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSI 953
Query: 621 YITLLRARSR 630
+ L++ R
Sbjct: 954 FFYLVKGLIR 963
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 191/418 (45%), Gaps = 39/418 (9%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY--MKSRAIYEDLRSQ 285
VR F + L A +D ++ P++Y+ ++I G C + +++ A+++++ S+
Sbjct: 307 VRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIH--GYCKSHNLLRALALHDEMISR 364
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V N V + +++ ++ TLEV +K +++ G+ D +YNI+ A C+ G
Sbjct: 365 GVKTNCVVVSCILHCLG-EMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVED 423
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ E+K L LDV Y+T++ + A + ++M G+ P+ +T++
Sbjct: 424 AVEMVEEMK----SKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYN 479
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
L + G + + L + M G +PNS ++++ + A F S
Sbjct: 480 VLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLE-- 537
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS---FKPTTTTYN 519
D N + S M + ++ + V S Y F K + + +
Sbjct: 538 ----------DKNIEIYSAMVNGYCET-----DLVKKS-YEVFLKLLNQGDMAKKASCFK 581
Query: 520 ILMKACCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+L K C T D + L++ M + P+ I ++ ++ A +G+++ A + + G
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+PDVV YT I R L++A LF++MK I+P+++T+ LL GSL E
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLD-----GSLKE 694
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 201/505 (39%), Gaps = 68/505 (13%)
Query: 206 DVNLAIRYACIVPRADILFCNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID 264
D R I+P D+L CNF+ + ++ AL Y+ K+ PN Y +I
Sbjct: 181 DFLFQTRRRGILP--DVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIK 238
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
GD + ++E++ V + Y F + + N H EV + +K
Sbjct: 239 ALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPL 298
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y +++ C N + E G +E +GV+ DV+ YS+++ + + A
Sbjct: 299 EVYAYTAVVRGFC---NEMKLDEAQGVFDDMERQGVVP-DVYVYSSLIHGYCKSHNLLRA 354
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L + ++M+S GV N + S +++ G+ + + F+E+ ++G + NI+ A
Sbjct: 355 LALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDA 414
Query: 443 ---------CVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
VE + ++ RL + +T L D + M+ K +
Sbjct: 415 LCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPD 474
Query: 491 TNTPNFVP-----NSHYSSFDKRFSF------KPTTTTYNILMKACCTD--------YYR 531
T N + N H K F KP +TT+ ++++ C+ Y+
Sbjct: 475 IVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFN 534
Query: 532 ---------VKALMN----------------EMRTVGLSPNHISWTILIDACGGSGNVEG 566
A++N ++ G S L+ +G++E
Sbjct: 535 SLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEK 594
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M + P + Y+ + ++ +K A +LF+ H P++VTY ++
Sbjct: 595 AVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMIN 654
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R L E ++QDM + G
Sbjct: 655 SYCRMNCLQEAHD---LFQDMKRRG 676
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 212/513 (41%), Gaps = 82/513 (15%)
Query: 114 EMVASGIVKSIREGRIDCVV--GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV 171
EM++ G+ + +CVV +L L E+G+ LE+ D FK LK E LD
Sbjct: 360 EMISRGV-------KTNCVVVSCILHCLGEMGMT-LEVVDQ--FKELK-ESGMFLDGVAY 408
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF--VR 229
+ + +L + V E+ EE + +L ++ I C+ F F ++
Sbjct: 409 NIVFDALCMLGKVEDAV-EMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMK 467
Query: 230 EFGKKRDLVS----------------ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GD 271
E G K D+V+ ++ D + PN + II+ G+C G
Sbjct: 468 EKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIE--GLCSGGK 525
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+++ + L +N+ + + N + +K + EV+ + G MA AS LL
Sbjct: 526 VLEAEVYFNSLEDKNIEIYSAMVNGYCETDL--VKKSYEVFLKLLNQGDMAKKASCFKLL 583
Query: 332 KACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
C+ G+ A ++ + ++E ++ YS I+ A + A + +
Sbjct: 584 SKLCMTGDIEKAVKLLDRMLLSNVEPSKIM------YSKILAALCQAGDMKNARTLFDVF 637
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G TP+ +T++ +IN+ +++A LF++M + G +P+ +LL ++
Sbjct: 638 VHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLG 697
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
R F S KT T + +D + + P+ V
Sbjct: 698 KR----FSSHGKRKT-----------TSLYVSTILRDMEQMKINPDVV------------ 730
Query: 510 SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
Y +LM ++ + +L ++M GL P+ I++T L+ G+VE A
Sbjct: 731 -------CYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKA 783
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ +L M GM+PDV + + +++++++
Sbjct: 784 VTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ + C + A+ L R G+ PDV+ V + +A +++E++
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K + PN TY +++A + G L +Q L V+++M + G
Sbjct: 222 KRFGFIPNCYTYAIVIKALCKKGDL---KQPLCVFEEMERVG 260
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N +K C + KA+ + + R G+ P+ ++ L + G V+ AL + + ++
Sbjct: 163 FNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLK 222
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN---LVTYITLLRARSRYG 632
G P+ Y IK + LKQ +FEEM+ + P+ YI L R
Sbjct: 223 RFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSD 282
Query: 633 SLHEVQQ 639
+EV Q
Sbjct: 283 LGYEVLQ 289
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL-------- 342
+FNSL++ + D + ++ K M G YNIL+ C GN L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLEL 428
Query: 343 AQEIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIV 370
A++ YGE ++ + +KG + D TYS ++
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP-DTSTYSKVI 487
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +A A + E+M S V P+ T++ LI++ GL++QA F+EM++ GC
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNM 482
PN L+ A ++A + A LF ++ T + G G ++ +
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ + + + P+ Y D P TY L+ C + + L++ M
Sbjct: 608 YARMRGN-ADIPDV---DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PNHI + LID G ++ A + M E G P+V Y++ I + KRL
Sbjct: 664 VEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLD 723
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
A + M PN++ Y ++ + G E + +++ ++
Sbjct: 724 LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M G D + + C AG + E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR-------WREAL 287
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K KLD Y+ ++ +A ++ A+ M S+ PN +T+ L+ C
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ + + M+ GC P+ + N L+ A + + A++L + Q
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Query: 469 --------GEDYDGNTDRISNMEHK-----DKQSITNTPNFVPN-----SHYSSFDKRFS 510
G + + D + E D + N N V N F+K +S
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN-VSNLARCLCGAGKFEKAYS 466
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM++ + P+ ++TILID+
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ A + M DG +P+VV YT I ++++++ A LFE M PN+V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G + + Q A
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYA 609
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 61/431 (14%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ +I ++ S+ + ++ ++ + NA + +++ M+ V+
Sbjct: 455 LCG-AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ + C G A++ + E+ + +V TY+ ++ + A+ A
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEM----VRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--------------LQAG 428
++ E MLS G PN +T+++LI+ +G +E+A ++ M + G
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 429 C--EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+PN L+ +A + A L ++ + YD D + D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN-HIVYDALIDGFCKVGKLD 688
Query: 487 KQSITNTP----NFVPNSH-YSSF------DKRF-------------SFKPTTTTYNILM 522
+ + T + PN + YSS DKR S P Y ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 523 KACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
C + YR+ ++M E G PN +++T +ID G +G V+ L++++ M
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YG 632
G +P+ V Y I C + L A L +EMK ++ Y ++ +R G
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG 865
Query: 633 SLHEVQQCLAV 643
L E+ + +AV
Sbjct: 866 LLDEIAENVAV 876
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 134/363 (36%), Gaps = 78/363 (21%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CC G +A E G +K L K TY+ +V+VF +A A V
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKP----SRLTYNALVRVFLEADRLDTAYLVHR 256
Query: 388 DMLSAGVTP--------------------------------NTITWSSLINACANAGLVE 415
+M +G +T+ ++ +I+ A L E
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFE 316
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+AM M + C PN ILL C+ Q R R+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRI-------------------- 356
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKA 524
+S M + N + +++ S D +++K P YNIL+
Sbjct: 357 ---LSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 525 CCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
C + + EM + N ++ + L G+G E A I++ M
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G PD Y+ I + + ++ AF LFEEMK + P++ TY L+ + + G L +
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ 533
Query: 637 VQQ 639
++
Sbjct: 534 ARK 536
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 175/439 (39%), Gaps = 38/439 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + K R + SA ++ PN+ +ID G K+ IY
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 282 LRSQ----NVTL------------NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+R +V + NI+ + +L++ AH +K ++ M G +
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y+ L+ C G AQ ++ + + +G +V+TYS+++ K +AL
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTK---MSERGY-GPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
KV ML PN I ++ +I+ G ++A L M + GC PN ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+A + D+ L R A G + T R+ + H + ++H
Sbjct: 787 GKAGKVDKCLELMRQMG------AKGCAPNFVTYRVL-INH------CCAAGLLDDAHQL 833
Query: 504 SFDKRFSFKPT-TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + ++ P Y +++ ++ L++E+ P ++ ILID+ +G
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Query: 563 NVEGALQILKIMRE--DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL++ K M + D Y++ I+ + ++ +AF L+ +M P L
Sbjct: 894 RLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSI 953
Query: 621 YITLLRARSRYGSLHEVQQ 639
+ L++ R E Q
Sbjct: 954 FFYLVKGLIRINRWEEALQ 972
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 172/402 (42%), Gaps = 43/402 (10%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A RA+ A+ + SP+++ +I G+C G K+ + +D+R+ + ++ +N++
Sbjct: 169 AERAFKAALRRRVSPDLFTFNIVIS--GLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTI 226
Query: 298 MNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
++ A + + K M + G+ + ++N+L+ C NT A ++ E+K
Sbjct: 227 IDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQ 286
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+G+ V TYS +V + +K+ ++M G+ PN T +S++N G
Sbjct: 287 ---QGIAA-SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKG 342
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A + M Q +PN IL+ +R K +A+ E
Sbjct: 343 MMTDAEGWIDSMEQKNVKPNVVTYTILVDG-------------YRRLDKMKDALAVKEAM 389
Query: 473 DGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFD------KRFSFKPTTTTYNILMKA 524
G R I N F N + S + + TYN+L+ A
Sbjct: 390 SGKGVR-------PNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGA 442
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C KA L++EM VGL P H+++ +I+ GN++ A +I M + +
Sbjct: 443 LCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRAN 502
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
VV Y IK R ++++ L EM + PN VTY T+
Sbjct: 503 VVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 150/373 (40%), Gaps = 67/373 (17%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+ RA LR + V+ +++ FN +++ L+ +V K+++ G+ + +YN +
Sbjct: 168 LAERAFKAALR-RRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTI 226
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G + +K + G+ +V T++ +V + A++V E+M
Sbjct: 227 IDGYCKRGRAGRMYHVDALLKEMVEAGISPNEV-TFNVLVNGYCKDSNTAAAVRVFEEMK 285
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQF 449
G+ + +T+S+L+ + G VE+ + L +EM G PN N +L C +
Sbjct: 286 QQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMT 345
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D W I +ME K+
Sbjct: 346 D-----AEGW-------------------IDSMEQKN----------------------- 358
Query: 510 SFKPTTTTYNILMKACCTDYYR-------VKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP TY IL+ D YR A+ M G+ PN + LI +G
Sbjct: 359 -VKPNVVTYTILV-----DGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNG 412
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAI-KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ +L MR G+ D+V Y I +CV+ + +++A L +EM ++P +TY
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGE-VRKAVKLLDEMLMVGLEPVHLTY 471
Query: 622 ITLLRARSRYGSL 634
T++ G++
Sbjct: 472 NTIINGYCEKGNI 484
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 182/433 (42%), Gaps = 40/433 (9%)
Query: 26 RNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMASKLAKDG 85
R++P+ V +L S+L + V ++ A + +RR +S + + S L K G
Sbjct: 145 RHRPSAFSVNRLL-----SALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTG 199
Query: 86 RLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVA 145
+L + + + + S+++ + G K R GR+ V +LK++ E G++
Sbjct: 200 QLRKAGDVAKDIRAW----GLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGIS 255
Query: 146 PLELFDGSGFKLLKNE-CQRLLDSGEVEMF-----VGLMEVLEEFRLPVKELDEEFRI-- 197
P E+ F +L N C+ + V +F G+ + + V L E ++
Sbjct: 256 PNEVT----FNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEE 311
Query: 198 -VQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNM 256
V+L D+ L A + + + F KK + A D+ ++ PN+
Sbjct: 312 GVKLVDEMKDLGLVPNLATL--------NSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNV 363
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
++D + A+ E + + V N ++N L+ D + +
Sbjct: 364 VTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDE 423
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV--FTYSTIVKV 372
M+ GV AD+ +YN+L+ A C+ G E+ VK L+ ++ L+ TY+TI+
Sbjct: 424 MRMKGVRADIVTYNVLIGALCVKG------EVRKAVKLLDEMLMVGLEPVHLTYNTIING 477
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + + A +++ M N +T++ I G +E+ L EML+ G PN
Sbjct: 478 YCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPN 537
Query: 433 SQCCNILLQACVE 445
+ + + +E
Sbjct: 538 GVTYDTIKEGMME 550
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 36/303 (11%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-- 419
D+FT++ ++ + A V +D+ + G+ P+ +T++++I+ G + H
Sbjct: 184 DLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVD 243
Query: 420 -LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--------SWTLSKTQVALGE 470
L +EM++AG PN N+L+ + A R+F + ++ + + G
Sbjct: 244 ALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGL 303
Query: 471 DYDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
+G + + E KD + N NS + F K K TD
Sbjct: 304 CSEGKVEEGVKLVDEMKDLGLVPNLATL--NSVLNGFCK---------------KGMMTD 346
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ ++ M + PN +++TIL+D ++ AL + + M G+ P+ Y
Sbjct: 347 ---AEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNC 403
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I R+ + L +EM+ ++ ++VTY L+ A G EV++ + + +M
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG---EVRKAVKLLDEML 460
Query: 649 KAG 651
G
Sbjct: 461 MVG 463
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 138/376 (36%), Gaps = 110/376 (29%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLM--NVNAHDLKFT 308
SPN +++ G C D + A+ +E+++ Q + ++ +++L+ + ++
Sbjct: 255 SPNEVTFNVLVN--GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEG 312
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ LG++ ++A+ N +L C G A+ G + +E K V K +V TY+
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAE---GWIDSMEQKNV-KPNVVTYTI 368
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNT------------------------------ 398
+V + + AL VKE M GV PN
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428
Query: 399 -----ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+T++ LI A G V +A+ L +EML G EP N ++ E A+
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + ME K++
Sbjct: 489 EIR-----------------------TRMEKGKKRA------------------------ 501
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN+ +K C L+NEM GL PN +++ + +
Sbjct: 502 NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG-------------- 547
Query: 572 KIMREDGMSPDVVAYT 587
M E G +PDV +T
Sbjct: 548 --MMEKGYTPDVRGFT 561
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 172/428 (40%), Gaps = 58/428 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI---CGYCSLRRL 652
Query: 638 QQCLAVYQ 645
+ +++
Sbjct: 653 DEAERIFE 660
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 202/459 (44%), Gaps = 38/459 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F + + + K DL +A Y SPN+ + TI+ + G+C G ++ +Y
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYTIL-IKGLCQDGRIYEAFGMY 414
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + +I ++SL++ +L+ +Y++M K+G D+ Y +L+ L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LS 472
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ + VK L ++L+V +++++ + + ALKV M G+ P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++++ G +E+A+ LF M + G EP++ L+ A + + +LF
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 458 SWTLSKTQVALG------------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-- 503
+K + + + +N+ + T N + + S
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 504 ---------SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
K F P T T IL+ C D + + M G PN +++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D S ++EG+ ++ + M+E G+SP +V+Y+ I + R+ +A ++F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ P++V Y L+R + G L E +Y+ M + G
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNG 806
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 145/346 (41%), Gaps = 55/346 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F +L+N ++ +++K M++ G+ D+ +Y+ L+ AG + +++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ H KGV KLDV +S+ + V+ + A V + ML G++PN +T++ LI
Sbjct: 345 SQALH---KGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A ++ ++L+ G EP+ + L+ + F L+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI------- 453
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ + P Y +L+
Sbjct: 454 ----------------------------------------KMGYPPDVVIYGVLVDGLSK 473
Query: 528 DYYRVKALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ A+ ++ +G S N + + LID + AL++ ++M G+ PDV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+TT ++V + RL++A LF M ++P+ + Y TL+ A ++
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 174/420 (41%), Gaps = 36/420 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + F K +L S Y+ K P++ I ++D G + +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q++ LN+ VFNSL++ +F L+V++ M G+ D+A++ +++ + G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + + L+ D Y T++ F + L++ + M ++ +
Sbjct: 547 LEEALFLFFRMFKMG----LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +I+ +E A F +++ EP+ N ++ + D A R+F
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF------KP 513
++ + NT ++ + H N+ + FS KP
Sbjct: 663 KVTP--------FGPNTVTLTILIHV----------LCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY LM + D L EM+ G+SP+ +S++I+ID G V+ A I
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVVAY I+ + RL +A L+E M ++P+ + L RA S Y
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL----LQRALSEY 820
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ + + ++ ID SG++ A + K M G+SP+VV YT IK + R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F ++ ++ ++P++VTY +L+ + G+L + A+Y+DM K G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL---RSGFALYEDMIKMG 456
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ L+ C + R L M G+ P+ I+++ LID +G + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ DVV +++ I V V+S L A +++ M I PN+VTY L++ +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G ++E +Y + K G
Sbjct: 404 DGRIYEA---FGMYGQILKRG 421
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G L VY+ M G
Sbjct: 367 VKSGDLATAS---VVYKRMLCQG 386
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 214/516 (41%), Gaps = 94/516 (18%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R GRID G+LK + + G P D + +L + L +G+++
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGP----DVVTYTVLIDA---LCAAGKLD------------ 314
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAY 244
KEL + R +KPD+ + + + +FG DL + R +
Sbjct: 315 --KAKELYTKMRASS---HKPDL--------------VTYITLMSKFGNYGDLETVKRFW 355
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
+ +P++ +++ G ++ + + +R + + N++ +N+L++ +N
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
L LE++ NM+ LGV SY + + G+ A + + ++K +G++
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK---RGIMP-S 471
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ + + A+ + A + D+ + G++P+++T++ ++ + AG +++A L
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
EML GCEP+ N L+ +A + D A+++F
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL----------------------- 568
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
K PT TYNIL+ + +KA L M+
Sbjct: 569 ------------------------KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMK 604
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN +++ L+D + V+ AL++ M SPDV+ Y T I ++ R
Sbjct: 605 ESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAG 664
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
AF + +MK + + P+ VT TLL + G + +
Sbjct: 665 YAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVED 699
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 30/354 (8%)
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ F ++ MQK + + +Y + KA + G A G+++ + L+
Sbjct: 139 EDMAFVFDL---MQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMR----QAGFVLN 191
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++Y+ ++ + + ALKV + M+S G+ P+ T+S+L+ A M L E
Sbjct: 192 AYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLE 251
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDRI 479
EM G PN I ++ A + D A+ + ++ G D Y D +
Sbjct: 252 EMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME----DEGCGPDVVTYTVLIDAL 307
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
DK T +SH KP TY LM D VK +
Sbjct: 308 CAAGKLDKAKELYT-KMRASSH----------KPDLVTYITLMSKFGNYGDLETVKRFWS 356
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G +P+ +++TIL++A SG V+ A +L +MR G+ P++ Y T I + +
Sbjct: 357 EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR 416
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL +A LF M+ + P +Y+ + YG L + ++ L ++ M K G
Sbjct: 417 RLDEALELFNNMESLGVAPTAYSYVLFI---DYYGKLGDPEKALDTFEKMKKRG 467
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 58/346 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++ M+ G ++ +YN+LL A G + E++ + +G K ++ T++
Sbjct: 808 LKLFVEMKNAGCCPNIFTYNLLLDA---HGKSKRIDELFELYNEMLCRGC-KPNIITHNI 863
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + AL + +++S +P T+ LI AG E+AM +FEEM
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ 923
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C+PN NIL+ +A + A LF+ K+
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMI--------------------------KE 957
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLS 545
I +P +Y IL++ C RV ++ E++ GL
Sbjct: 958 GI---------------------RPDLKSYTILVE-CLFMTGRVDDAVHYFEELKLTGLD 995
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +S+ ++I+ G S +E AL + M+ G+SP++ Y I + + QA +
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FEE++ ++PN+ TY L+R S+ G+ + +V++ M G
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGN---KDRAFSVFKKMMIVG 1098
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 23/292 (7%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ + ALK+ +M +AG PN T++ L++A + +++ L+ EM
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISN 481
L GC+PN NI++ A V++ ++A L+ S S T G G +
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK--AG 907
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+ + P++ KP YNIL+ + L M
Sbjct: 908 RSEEAMKIFEEMPDY-------------QCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ S+TIL++ +G V+ A+ + ++ G+ PD V+Y I +S+RL
Sbjct: 955 IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A SLF EMK+ I P L TY L+ +G+ V Q +++++ G
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALIL---HFGNAGMVDQAGKMFEELQFMG 1063
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 184/484 (38%), Gaps = 70/484 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D AL ++ KK P++ C + G +++ I+ D+ +
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ + +N +M A + ++ M G D+ N L+ AG A
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++G +K L+ L V TY+ ++ AL + M +G PNT+T+++L
Sbjct: 563 QMFGRLKDLK----LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--LS 462
++ V+ A+ +F M C P+ N ++ ++ + AF + LS
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLS 678
Query: 463 KTQVAL-----GEDYDGNTD---------------RISN-----------MEHKDKQSIT 491
V L G DG + + SN +E + +++I+
Sbjct: 679 PDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAIS 738
Query: 492 NTPNFVPNS--------------------------HYSSFDKRFSFKPTTTTYNILMKAC 525
V NS + F K PT +YN LM
Sbjct: 739 FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL 798
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C L EM+ G PN ++ +L+DA G S ++ ++ M G P++
Sbjct: 799 LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I V+S + +A L+ E+ P TY L+ + G ++ + +
Sbjct: 859 ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAG---RSEEAMKI 915
Query: 644 YQDM 647
+++M
Sbjct: 916 FEEM 919
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 184/473 (38%), Gaps = 76/473 (16%)
Query: 225 CNFVREFGKKRDLVSALR-AYDASKKHL--SSPNMYICRTIIDVCGICGDYMKSRAIYED 281
CN++ EF + V + +D +K + +PN Y+ TI I G ++
Sbjct: 125 CNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYL--TIFKALSIKGGIRQAPFALGK 182
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R LN Y +N L+ + K L+VYK M G+ M +Y+ L+ A +
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T ++ E++ L L+ +++TY+ ++V A A + + M G P+ +
Sbjct: 243 TGTIMDLLEEMETLG----LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVV 298
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI+A AG +++A L+ +M + +P+ L+ + R +
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 460 --------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
++ T + G D+ +M + VPN H
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDM-----LDVMRVRGIVPNLH---------- 403
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TYN L+ +AL N M ++G++P S+ + ID G G+ E AL
Sbjct: 404 -----TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALD 458
Query: 570 ILKIMREDG-----------------------------------MSPDVVAYTTAIKVCV 594
+ M++ G +SPD V Y +K
Sbjct: 459 TFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYS 518
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ ++ +A L EM +P+++ +L+ + G + E Q +D+
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I+E++ N ++N L+N A ++ +++K M K G+ D+ SY IL++
Sbjct: 915 IFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ G A + E+K L D +Y+ ++ ++ + AL + +M + G++
Sbjct: 975 MTGRVDDAVHYFEELKLTG----LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS 1030
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P T+++LI NAG+V+QA +FEE+ G EPN N L++ ++ DRAF +
Sbjct: 1031 PELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSV 1090
Query: 456 FR 457
F+
Sbjct: 1091 FK 1092
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDY-----MKSRAIYEDLRSQNVTLNIYVF 294
A++ ++ + PN I +I+ G G+ + R I E +R + I V
Sbjct: 912 AMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
M D + ++ ++ G+ D SYN+++ + A ++ E+K+
Sbjct: 972 CLFMTGRVDD---AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKN-- 1026
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+G+ +++TY+ ++ F +A A K+ E++ G+ PN T+++LI + +G
Sbjct: 1027 -RGI-SPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084
Query: 415 EQAMHLFEEMLQAGCEPNS 433
++A +F++M+ GC PN+
Sbjct: 1085 DRAFSVFKKMMIVGCSPNA 1103
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 159/407 (39%), Gaps = 42/407 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFT 308
+P + +I G G +K+ ++ ++ N FN+L++ +A DL
Sbjct: 574 APTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL--A 631
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+++ M + D+ +YN ++ G A Y ++K + + L Y+
Sbjct: 632 LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTL----YTL 687
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ V D + V E + +G+ + W L+ +E+A+ E ++
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLV--- 744
Query: 429 CEPNSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISN---- 481
C Q N++L C+ +A +LF +T S E Y+ D +
Sbjct: 745 CNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNIT 804
Query: 482 -------MEHKDKQSITN--TPNFVPNSHYSS--FDKRFSF---------KPTTTTYNIL 521
+E K+ N T N + ++H S D+ F KP T+NI+
Sbjct: 805 EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A KAL E+ + SP ++ LI +G E A++I + M +
Sbjct: 865 ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
P+ Y I ++ + A LF+ M I+P+L +Y L+
Sbjct: 925 KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK ++ A + K P++ +++ + G + +E+L+
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N ++N + L+ L ++ M+ G+ ++ +YN L+ AG A
Sbjct: 994 LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E++ + L+ +VFTY+ +++ + + A V + M+ G +PN T++ L
Sbjct: 1054 KMFEELQFMG----LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Query: 405 INAC 408
N C
Sbjct: 1110 PNKC 1113
>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 689
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 55/342 (16%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F +L+N ++ E++K M++ G+ D+ +Y+ L+ AG + +++
Sbjct: 177 NVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLF 236
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ H KGV KLDV +S+ + V+ + A V + ML G++PN +T++ LI
Sbjct: 237 SQALH---KGV-KLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKG 292
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A ++ ++L+ G EP+ + L+ F + ++ A
Sbjct: 293 LCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDG-------------FCKYGNLRSGFA 339
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
L ED + + P Y +L+ C
Sbjct: 340 LYEDM----------------------------------IKMGYPPDVVIYGVLVDGLCK 365
Query: 528 DYYRVKALMNEMRTVGLS--PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ AL ++T+G S PN + + LID + AL++ ++M G+ PDV
Sbjct: 366 QGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVAT 425
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
TT ++V V RLK+ LF M ++P+ V + TL+ A
Sbjct: 426 ITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDA 467
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 223/554 (40%), Gaps = 60/554 (10%)
Query: 112 SLEMVASGIVKSIREGR---IDCVVGVLKKLNELGVAPLEL----------FDGSGFKLL 158
S + +A+G+ K+I+EG +D V G + NE + L L FDG
Sbjct: 37 SAKTLAAGVSKAIKEGNFNLLDSVYGSNLQRNETNLVLLSLESEPNSALDTFDGQRSDSF 96
Query: 159 KNECQ----------------RLLDSGEVEMFVGLMEVLEE--FRLPVKELDEEFRIVQL 200
C+ L GEV + ++ E FR+ + ++ + L
Sbjct: 97 DKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILK--GL 154
Query: 201 CVNKPDVN---LAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY 257
V++ +V L++ C + FC + F K+ ++ A + ++ +P++
Sbjct: 155 SVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLI 214
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNM 315
T+ID G ++ + V L++ VF+S ++V L +VYK M
Sbjct: 215 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRM 274
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+ ++ +Y IL+K C G A IY ++ K L+ V TYS+++ F
Sbjct: 275 LCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQI----LKRGLEPSVVTYSSLIDGFCK 330
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ + EDM+ G P+ + + L++ GL+ A+ + L PN
Sbjct: 331 YGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVV 390
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD--RISNMEHKDKQSITNT 493
N L+ + D A ++FR + + D T R++ ME + K+ +
Sbjct: 391 FNSLIDGWCRLNRCDEALKVFRLMGI----YGIKPDVATITTLMRVTVMEGRLKEGL--- 443
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
F+ + F + +P + LM A C + L + M+ + +
Sbjct: 444 --FL---FFRMF--KMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVC 496
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
++I+ +VE A + + E M PD+V Y T I +RL +A +FE +K
Sbjct: 497 NVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKF 556
Query: 612 YQIQPNLVTYITLL 625
PN VT L+
Sbjct: 557 TPFGPNAVTLTILI 570
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 136/350 (38%), Gaps = 62/350 (17%)
Query: 309 LEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+EV M L G ++ ++ L+ C G A E++ K +E +G+ D+
Sbjct: 159 IEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELF---KVMEQRGIAP-DLI 214
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
YST++ + A M K+ L GV + + +SS I+ G + A +++ M
Sbjct: 215 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRM 274
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN IL++ CQ R + F
Sbjct: 275 LCQGISPNVVTYTILIKG---LCQDGRIYEAF---------------------------- 303
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRT 541
Y KR +P+ TY+ L+ C Y ++ AL +M
Sbjct: 304 ---------------GIYCQILKR-GLEPSVVTYSSLIDGFCK-YGNLRSGFALYEDMIK 346
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G P+ + + +L+D G + AL+ + P+VV + + I R R +
Sbjct: 347 MGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDE 406
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A +F M Y I+P++ T TL+R G L E L ++ M+K G
Sbjct: 407 ALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKE---GLFLFFRMFKMG 453
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 32/302 (10%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++D+ + + I+K + ++A ++ +L G PN +T+ +LIN G +++A
Sbjct: 140 FRVDIVSCNKILKGLS-VDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 198
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
LF+ M Q G P+ + L+ +A +LF S L K V L
Sbjct: 199 ELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLF-SQALHKG-VKL---------- 246
Query: 479 ISNMEHKDKQSITNTPNFVPNSHY--SSFD--KRF---SFKPTTTTYNILMKACCTD--Y 529
D ++T + Y ++FD KR P TY IL+K C D
Sbjct: 247 -------DVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRI 299
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
Y + ++ GL P+ ++++ LID GN+ + + M + G PDVV Y
Sbjct: 300 YEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVL 359
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + + A + I+PN+V + +L+ R L+ + L V++ M
Sbjct: 360 VDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCR---LNRCDEALKVFRLMGI 416
Query: 650 AG 651
G
Sbjct: 417 YG 418
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 166/388 (42%), Gaps = 60/388 (15%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNM 315
I V G+C G ++ + ED++ V+ N+ +N+L++ + + K M
Sbjct: 160 IVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEM 219
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+ + +YNIL+ C N A ++GE ++ +G L+ +V TY+ ++
Sbjct: 220 VAKGICPNEVTYNILIDGFCKDENVSGAMRVFGE---MQRQG-LRPNVVTYNILINGLCS 275
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ +++ M+S+ + PN +T + LIN V +A++LF +M + G +PN+
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ A + + + AF L Y+ DR
Sbjct: 336 YTTLIDAYCKDGRMEDAFAL----------------YNMMIDR----------------- 362
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTI 553
P +TYN L+ C D ++LMNEM + LS + +++ I
Sbjct: 363 --------------GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID+ G A+++L M E G++P V Y T + R L+ A + M+
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
Q N+VT+ L++ G L + L
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLL 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 54/363 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y ++ + + LN+ FN ++N L +V ++M+ GV ++ +YN L+ C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + +K + AKG+ +V TY+ ++ F + A++V +M G+
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEV-TYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++ LIN + G V++A+ L ++M+ + EPN N+L+ + + A L
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F ++ME KQ + P
Sbjct: 321 F-----------------------NDME---KQGVD---------------------PNA 333
Query: 516 TTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+ A C D R++ AL N M G+ P ++ LI G+V+ A ++
Sbjct: 334 MTYTTLIDAYCKDG-RMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMN 392
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +S DVV Y I + ++A L +EM + P+ VTY TL+ R G
Sbjct: 393 EMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREG 452
Query: 633 SLH 635
+L
Sbjct: 453 NLR 455
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 156/354 (44%), Gaps = 64/354 (18%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D++F VY+ M K + ++ S+NI++ C G A ++ ++ ++ GV +V
Sbjct: 138 DMEF---VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV---IEDMKVWGV-SPNV 190
Query: 364 FTYSTIVKVFAD----AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
TY+T++ + K ++ +KE M++ G+ PN +T++ LI+ V AM
Sbjct: 191 ITYNTLIDGYCKMGRIGKMYKADAILKE-MVAKGICPNEVTYNILIDGFCKDENVSGAMR 249
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F EM + G PN NIL+ + D A L R +S
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL-RDQMVS----------------- 291
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
S++E P T+N+L+ C + +A L N
Sbjct: 292 SDLE-----------------------------PNVVTHNVLINGFCKNKTVNEAINLFN 322
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G+ PN +++T LIDA G +E A + +M + G+ P+V Y I R
Sbjct: 323 DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG 382
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+K A SL EM ++ ++VTY L+ + + G E ++ + + +M++ G
Sbjct: 383 DVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKG---ESRKAVKLLDEMFEKG 433
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 6/221 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F K + + A+ ++ +K PN T+ID G + A+Y + +
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N L+ D+K + M + AD+ +YNIL+ + C G + A
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E + KG L TY+T++ + + AL V+ M G N +T + L
Sbjct: 424 KLLDE---MFEKG-LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
I G +E A L EML+ G PN I+ + +E
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 41/398 (10%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLM----NVNAHDLKF----------TLEVYKNMQKL 318
M+S+ + DL + ++ +N Y M +V A LK L + ++ L
Sbjct: 93 MESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLAL 152
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + +Y IL+ C G T A ++ ++ +E K ++ +V YSTI+ K
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQV---LRQIEGK-LVNTNVVMYSTIIDGLCKDKL 208
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +M+ + P +T+SSLI G + A LF EM+ P++ NI
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268
Query: 439 LLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
L+ A + + A + + T V DG + N K K
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC--LVNEVGKAK-------- 318
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
H S R P + +YNI++ C +A L +EM G++P+ +++
Sbjct: 319 -----HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID +G + A +++ M + + D+V Y + I V +++ + +A +L +++K +
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
IQPN+ TY L+ + G L Q V+QD+ G
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQD---VFQDLLIKG 468
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 164/393 (41%), Gaps = 27/393 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYE 280
+ N + + G+ R + LR + L + N+ + TIID G+C D + + A +Y
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIEGK---LVNTNVVMYSTIID--GLCKDKLVTDAYGLYS 217
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + + F+SL+ KF ++ M + D ++NIL+ A C G
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+ + + + +GV + V TY+T++ + A V + V PN+
Sbjct: 278 KIKEAKNV---IAVMMKEGV-EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNS 333
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+++ +IN +V++A+ LF EM G P+ N L+ +A + A+ L
Sbjct: 334 RSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDE 393
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + Y+ D +H DK +I K +P TY
Sbjct: 394 MHNNCIPADI-VTYNSLIDVFCKNQHVDK-AIALVKKI----------KEHGIQPNMCTY 441
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ C + + ++ G + N ++ I+I+ G + A +L M +
Sbjct: 442 NILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMED 501
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+G+ PD V Y T I+ ++A L EM
Sbjct: 502 NGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 109/276 (39%), Gaps = 47/276 (17%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P + F + + F GK +D A R ++ +P+ Y ++D G
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKD---AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN----VN-----AHDLKF----------------- 307
+++ + + + V + +N+LM+ VN H L
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340
Query: 308 -----------TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
L ++ M G+ +YN L+ C AG A E+ E+ +
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN---- 396
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ D+ TY++++ VF + A+ + + + G+ PN T++ LI+ G ++
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
A +F+++L G N+ NI++ + FD A
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YED 281
+C V E GK + ++S + + +PN +I+ G C M A+ + +
Sbjct: 308 YC-LVNEVGKAKHVLSII------SRMRVAPNSRSYNIMIN--GFCKIKMVDEALCLFHE 358
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + + +NSL++ A + + E+ M + AD+ +YN L+ C +
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + VK ++ G+ + ++ TY+ ++ + A V +D+L G N
Sbjct: 419 VDKAIAL---VKKIKEHGI-QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW 474
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ +IN GL ++A L +M G P++ ++QA + ++A +L R
Sbjct: 475 TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Query: 460 TL 461
+
Sbjct: 535 VI 536
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 161/375 (42%), Gaps = 42/375 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++Y +++ + + A D +V++ M++ + +YN+++ C +G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E +G + + G L D FTY ++ + A + ++M +G+ PN +
Sbjct: 294 V---EEAFGFKEEMVDYG-LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +L++ G +A + +EM+ AG +PN + L++ + Q RA +L +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------- 512
+V L D T T N + H+ DK +F+
Sbjct: 410 I----KVGLRPD-------------------TFTYNPLMQGHFQQHDKDGAFELLNEMRN 446
Query: 513 ----PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P +Y I++ C + +A L+ EM + GL PN + LI GN+
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISL 506
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A + L+ M + + PD+ Y + IK R+++A + +++ + P+ TY L+
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566
Query: 627 ARSRYGSLHEVQQCL 641
+ G+L + Q L
Sbjct: 567 GYCKTGNLEKADQLL 581
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 31/369 (8%)
Query: 276 RAIYE-DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
RAI + D RS++ + + V + L++ ++ +V M LG+ N LLK
Sbjct: 157 RAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLK 216
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A L ++ G +E G+L DV+TYST ++ A+ + A KV E+M
Sbjct: 217 DLLRADAMELLWKLKG---FMEGAGILP-DVYTYSTFIEAHCKARDFDAAKKVFEEMRRR 272
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
N +T++ +I+ +G VE+A EEM+ G P++ L+ + + A
Sbjct: 273 DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEA 332
Query: 453 FRLFRSWTLSKTQ---VALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDK 507
L + S + V G DG E D K+ I+
Sbjct: 333 KALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA--------------- 377
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P Y+ L++ C R L+ EM VGL P+ ++ L+ + +
Sbjct: 378 --GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
GA ++L MR G+ P+V +Y I ++ K+A +L EEM ++PN Y L+
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495
Query: 626 RARSRYGSL 634
S+ G++
Sbjct: 496 IGHSKEGNI 504
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-- 309
PN+Y +I+ G+C G+ ++ + E++ S+ + N +++ L+ ++ + +L
Sbjct: 451 PNVYSYGIMIN--GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E + M K V D+ YN L+K G A+E Y +V+ K L D FTYS +
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ----KRGLVPDEFTYSGL 564
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A ++ ML++G+ PN T++ L+ + E+ + + ML +G
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P++ I+++ + + AF + T+V +K
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVL-------TEV-------------------EKNG 658
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ VP+ H Y+ L+ C D + L++EM GL P
Sbjct: 659 L------VPDLH---------------IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + LID SG++ A + + G+ P+ V YT I ++ + AF L++
Sbjct: 698 IVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYK 757
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM I P+ Y L S L +Q L + ++M+ G
Sbjct: 758 EMLDRGIAPDAFVYNVLATGCSDAADL---EQALFLTEEMFNRG 798
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 99/266 (37%), Gaps = 52/266 (19%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
D S +P+T L++ G V A + M G P +CCN LL+ + A
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA- 221
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A L W L F +
Sbjct: 222 ---DAMELL--WKLK-----------------------------------------GFME 235
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TY+ ++A C D+ K + EMR + N +++ ++I SG VE
Sbjct: 236 GAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 295
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + M + G+SPD Y + + RLK+A +L +EM ++PN+V Y TL+
Sbjct: 296 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G E + ++M AG
Sbjct: 356 DGFMKEGKTAEA---FDILKEMISAG 378
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+R + ++ A +K+ P+++I ++I G+C D K+ + +++ +
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS--GLCKIADMEKAVGLLDEMAKE 692
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ I +N+L++ + D+ V+ ++ G++ + +Y L+ C G+ A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++Y K + +G+ D F Y+ + +DA + AL + E+M + G N +++
Sbjct: 753 FDLY---KEMLDRGIAP-DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNT 807
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
L++ G +++ L M+ PN+Q ++ +A + A R+F
Sbjct: 808 LVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF 860
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP I + + + K D+ A+ D K P + +ID G C GD
Sbjct: 659 LVPDLHI-YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID--GFCRSGDIS 715
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILL 331
++R +++ + ++ + N + +L++ N D+ ++YK M G+ D YN+L
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A + L Q ++ + + +G + +F +T+V F Q K+ M+
Sbjct: 776 TGCSDAAD--LEQALF-LTEEMFNRGYANVSLF--NTLVHGFCKRGKLQETEKLLHVMMD 830
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ PN T +++ AG + +A +F E+ Q
Sbjct: 831 REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 37/368 (10%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ Y+ ++ + C + A ++ E
Sbjct: 211 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--- 265
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ KG+ + DVFTYS+++ + W A ++ DML + PN +T++SLI+A A G
Sbjct: 266 MDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A LF+EM+Q +PN N L+ C DR + +TL ++ L +
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 473 DGNT---------------DRISNMEHKDKQSITNTPNFVPNSHYSSFD---KRFSFK-- 512
NT + +M + T T + + + + D + FK
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 513 ------PTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C + KA++ ++ + P+ ++ I+ + +G V
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E + + G+ PDV+AY T I + ++A++LF +MK P+ TY TL
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 625 LRARSRYG 632
+RA R G
Sbjct: 562 IRAHLRDG 569
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 179/414 (43%), Gaps = 36/414 (8%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD ++ LS N + + + + G+ +KSR +I F+ L++ A
Sbjct: 28 SYDGYREKLSR-NALLHLKLDEAVDLFGEMVKSRPFP----------SIVEFSKLLSAIA 76
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + M+ LGV ++ +YNI++ C A I G++ L
Sbjct: 77 KMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--- 133
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ T ++++ F A+ + + M+ G P+T+T+++L++ +A+ L
Sbjct: 134 -SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M+ GC+P+ ++ + + D A L K + + Y D +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VIYSTVIDSLC 251
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMN 537
H D + N ++ D + +P TY+ L+ +C +Y R L++
Sbjct: 252 KYRHVD-----DALNL-----FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLS 299
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M ++PN +++ LIDA G + A ++ M + + P++V Y + I
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL +A +F M P++VTY TL+ + +V + +++DM + G
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLING---FCKAKKVVDGMELFRDMSRRG 410
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 159/404 (39%), Gaps = 55/404 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K R + AL + P+++ ++I G + + + D
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FNSL++ A + K +++ M + + ++ +YN L+ C+
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQ+I+ + +K L DV TY+T++ F AK +++ DM G+ NT+
Sbjct: 361 LDEAQQIF---TLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI+ A + A +F++M+ G PN N LL + + ++A +F
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK + P TYN
Sbjct: 477 QKSKME-----------------------------------------------PDIYTYN 489
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+ + C L + G+ P+ I++ +I G E A + M+ED
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G PD Y T I+ +R + L +EM+ + + TY
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 151/323 (46%), Gaps = 20/323 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+ C A V E++ + + +G++ + TY+T++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF---RDMSRRGLVG-NTVTYTTLI 422
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A A V + M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NI+ + +A + + + LF S +L + D IS K +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMISGFCKKGLKEE 538
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
T F+ P + TYN L++A D + + L+ EMR+ + +
Sbjct: 539 AYTL-FIKMKEDGPL-------PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 549 ISWTILIDACGGSGNVEGALQIL 571
++ ++ D +G L++L
Sbjct: 591 STYGLVTDMLHDGRLDKGFLEVL 613
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 163/392 (41%), Gaps = 74/392 (18%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSS----PNMYICRTIIDVCGIC--GDYMKS 275
+ F + + RDL A D K +S P++Y +I G C G +
Sbjct: 221 VTFNTLISGMCRARDL----DAVDGLYKEMSDVGVKPDVYTYGALIK--GFCRTGRMENA 274
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++R V N VF +L ++AH ++ +++Y++M+ GVM D+ +YN L+
Sbjct: 275 VKMFNEMRDTGVNPNAVVFTTL--IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C A N A+ I E+K+ LK D TY+T++ MA+ +K+ M
Sbjct: 333 NGLCRARNLKAAESIVEEMKN----AGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAE 388
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V+ + +T+++LI+ + AG A + EM++A EP++ +++ A
Sbjct: 389 KEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKT 448
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
F+L + M++K K
Sbjct: 449 GFKLLKE-----------------------MQNKGK------------------------ 461
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP TYN++M C L++ M +G+SP+ I++ IL+D G V + +
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ GM PD YT+ I + K K
Sbjct: 522 ---LESSKGMVPDFAVYTSLISELAKKKPAKN 550
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 154/355 (43%), Gaps = 29/355 (8%)
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FN LM V +L +V+ M++ V + ++N L+ C A + +Y E+
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYKEM 246
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ GV K DV+TY ++K F + A+K+ +M GV PN + +++LI+A
Sbjct: 247 SDV---GV-KPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVA 467
G V M L+++M G P+ N L+ A A + ++ L +V
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362
Query: 468 LGEDYDG-NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
DG D +M KQ + +K S TY L+
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMA--------------EKEVSLD--EVTYTALISGLS 406
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
V A ++ EM L P++ ++T++IDA G+V+ ++LK M+ G P VV
Sbjct: 407 KAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVV 466
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y + + ++K A L M + + P+ +TY LL + ++G + ++
Sbjct: 467 TYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 24/235 (10%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--TLSKTQVALGEDYD 473
+A + ++L AG P ++ N+L++ V + A ++F ++ T V
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTF----- 223
Query: 474 GNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
NT IS M +D ++ + Y KP TY L+K C
Sbjct: 224 -NT-LISGMCRARDLDAV--------DGLYKEMSD-VGVKPDVYTYGALIKGFCRTGRME 272
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
A + NEMR G++PN + +T LIDA GNV + + + MR G+ PD+VAY +
Sbjct: 273 NAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH---EVQQCLA 642
R++ LK A S+ EEMK+ ++P+ VTY TL+ + G L +++Q +A
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 505 FDK-RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
FD+ R S +PT T+N L+ C D V L EM VG+ P+ ++ LI +
Sbjct: 209 FDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRT 268
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E A+++ MR+ G++P+ V +TT I + + L+++M+ + P+LV Y
Sbjct: 269 GRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAY 328
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ R +L + ++ ++M AG
Sbjct: 329 NALVNGLCRARNLKAAE---SIVEEMKNAG 355
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 21/304 (6%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R +D V G+ K+++++GV P G+ L+K C+ +G +E V + + +
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGA---LIKGFCR----TGRMENAVKMFNEMRDT 284
Query: 185 RLPVKELDEEFRIVQLC----VNKP-DVNLAIRYACIVPRADILFCN-FVREFGKKRDLV 238
+ + I C VN D+ +R ++P D++ N V + R+L
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP--DLVAYNALVNGLCRARNLK 342
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+A + K P+ T+ID C G + I + + + V+L+ + +L+
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A V + M + + D +Y +++ A C G+ ++ +K ++ K
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKL---LKEMQNK 459
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K V TY+ I+ + A + ML+ GV+P+ IT++ L++ G V
Sbjct: 460 GK-KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVAN 518
Query: 417 AMHL 420
+ L
Sbjct: 519 SEEL 522
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 216 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 336 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 441
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 442 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 464
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 568
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 179/404 (44%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P+++ T+++ G+C GD + ++ + + + ++ ++ ++++ N ++ L
Sbjct: 202 PDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ ++ +YN L++ C G A + ++ +E K + +V T+S +
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSAL 315
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 316 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 375
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L++ +A + + LFR E +
Sbjct: 376 FPNVVTYNTLIKGFCKAKRVEEGMELFR-------------------------EMSQRGL 410
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
+ NT TYN L++ D + + +M + G+ P+
Sbjct: 411 VGNT----------------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 448
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++IL+D G +E AL + + +++ M PD+ Y I+ ++ +++ + LF
Sbjct: 449 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 508
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++PN++ Y T++ R G E A++++M + G
Sbjct: 509 SLSLKGVKPNVIIYTTMISGFCRKGLKEEAD---ALFREMKEDG 549
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 173/388 (44%), Gaps = 57/388 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 282
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 374
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 375 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 414
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 474
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ +++P++ TY ++ + G + +
Sbjct: 475 LQKSKMEPDIYTYNIMIEGMCKAGKVED 502
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 185/438 (42%), Gaps = 50/438 (11%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD +K S N+ + + D + G+ ++SR + +I FN L++ A
Sbjct: 28 SYDYREKL--SRNVLLDLKLDDAVDLFGEMVQSRPLP----------SIVEFNKLLSAIA 75
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + MQ L + D+ SYNIL+ C LA + G++ L +
Sbjct: 76 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--- 132
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ T S+++ + K A+ + + M PNT+T+++LI+ +A+ L
Sbjct: 133 -DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 191
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE---------D 471
+ M+ GC+P+ ++ + D A L + K + + +
Sbjct: 192 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 251
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVP-NS---------HYSSFDKRFS------FKPTT 515
Y D ++ D + I PN V NS +S + S P
Sbjct: 252 YKNVNDALNLFTEMDNKGIR--PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T++ L+ A + V+A L +EM + P+ +++ LI+ ++ A + ++
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M P+VV Y T IK ++KR+++ LF EM + N VTY TL++ + G
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 634 LHEVQQCLAVYQDMWKAG 651
Q+ +++ M G
Sbjct: 430 CDMAQK---IFKKMVSDG 444
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 362
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 418
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 513
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 514 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 551
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 552 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 608
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 149/365 (40%), Gaps = 63/365 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 481
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLS 545
P TYNI+++ C +V+ L + G+
Sbjct: 482 ------------------------PDIYTYNIMIEGMCK-AGKVEDGWDLFCSLSLKGVK 516
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576
Query: 606 FEEMK 610
+EM+
Sbjct: 577 IKEMR 581
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 173/406 (42%), Gaps = 26/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 373
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 492
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 493 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + +Q N + ++ + ++V+ +++ M + G
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKG 643
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 188/467 (40%), Gaps = 67/467 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 394 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 508 RFSFKPTTTTYNILMKACC--------TDYY---------------------------RV 532
+ T T+ +L+ C DY+ +V
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 533 KA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A L +M GL P+ ++T L+D GNV AL + M E GM D++AYT+
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +L++A S EEM I P+ V I++L+ G + E
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 52/259 (20%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F K + G +PT
Sbjct: 249 FF------KDMIGAGA-----------------------------------------RPT 261
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ QQ + Y DM + G
Sbjct: 382 MM---QQAIKFYVDMRRVG 397
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 261 TIIDVC----GICGDYMKSRAI-YEDLRSQNVTL--NIYVFNSLMNVNAHD--LKFTLEV 311
T++ C G+C + + S+A+ Y + S + L N +F ++++ D ++ +
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M + G++ D +Y L+ GN + A + ++ + +KLD+ Y+++V
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG----MKLDLLAYTSLVW 691
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Q A E+M+ G+ P+ + S++ G +++A+ L
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 34/334 (10%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++K M+ G+ ++ +Y+ L+ C G A + ++ +E K + DVFT+S
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM--IERK--INPDVFTFSA 331
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F A K+ ++M+ + P+ +T+SSLIN +++A +FE M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C P+ + L++ +A + D LFR T++ T + G G+ D
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NE 538
+ K+ +++ VP P TYN L+ C + KA++
Sbjct: 452 EIF---KEMVSDG---VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
++ + P ++ I+I+ +G VE + + G+ PDVVAY T I R
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A +LF+EMK PN Y TL+RAR R G
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 35/363 (9%)
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ VT N + ++ A + + + M G D+ +Y +++ C G+T L
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASE---AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + +++ +G L+ V Y+TI+ K AL + ++M + G+ PN +T+S
Sbjct: 240 AFILLNKME----QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ N G A L +M++ P+ + L+ A V+ + A +L
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL------- 348
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK------PTTT 516
YD R + S+ N F + + F F P
Sbjct: 349 ---------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 517 TYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+Y+ L+K C RV L EM GL N +++T LI +G+ + A +I K
Sbjct: 398 SYSTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE 456
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + TY ++ + G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 634 LHE 636
+ +
Sbjct: 517 VED 519
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 181/416 (43%), Gaps = 46/416 (11%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPFP----------SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +A+ L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSK--------TQVALGEDYDGNTDRISNMEHKDKQSITNT 493
+ D AF L K T + G + + D N+ K+ ++
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL-FKEMETKGIR 288
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVKA--L 535
PN V S +S + S P T++ L+ A + V+A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM + P+ ++++ LI+ ++ A Q+ + M PDVV+Y+T IK +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+KR+ + LF EM + N VTY TL++ + G Q+ ++++M G
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE---IFKEMVSDG 461
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 160/393 (40%), Gaps = 55/393 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + + AL + + PN+ ++I G + + + D
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + +++ F++L++ + K ++Y M K + + +Y+ L+ C+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++++ + + +K DV +YST++K F AK +++ +M G+ NT+
Sbjct: 377 LDEAKQMF---EFMVSKHCFP-DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI AG + A +F+EM+ G PN N LL + + ++A +F
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK + PT TYN
Sbjct: 493 QRSKME-----------------------------------------------PTIYTYN 505
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+++ C L + G+ P+ +++ +I G+ E A + K M+ED
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G P+ Y T I+ +R + + L +EM+
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 144/334 (43%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ SY+ L+K C A E++ E+ G + TY+T++
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYTTLI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 23/243 (9%)
Query: 191 LDEEFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
LDE ++ + V+K PDV + + ++ F K + + + +
Sbjct: 377 LDEAKQMFEFMVSKHCFPDV--------------VSYSTLIKGFCKAKRVDEGMELFREM 422
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+ N T+I GD ++ I++++ S V NI +N+L++ L
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ + V++ +Q+ + + +YNI+++ C AG +++ +L KGV K DV
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC---NLSLKGV-KPDVVA 538
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ F + A + ++M G PN+ +++LI A G E + L +EM
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 426 QAG 428
G
Sbjct: 599 SCG 601
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 170/372 (45%), Gaps = 43/372 (11%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V+ ++ +N++++ A ++ +V++ M + GV + +YN ++ C A +A+
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ + + KGV +V TY+TI+ A+ A V + M+ GV P+ +T++++
Sbjct: 281 GVF---QKMVDKGVKPSNV-TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---- 460
I+ A +++A +F++M+ G +P++ I++ +A DRA +F+
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 461 ---------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNT---------PNFVPNSHY 502
L ++ G+ ++ RI M D + T N N
Sbjct: 397 KPNNGTYNCLIHGYLSTGQ-WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTI 553
S FD R KP+ T Y I++ Y K ++EM + G+SPNH +
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHG-----YGKKGALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+I A ++ + I M++ G+SP+VV Y T I + R+ A F +M +
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 614 IQPNLVTYITLL 625
+ PN V + +L+
Sbjct: 571 VTPNNVVFNSLV 582
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 169/377 (44%), Gaps = 39/377 (10%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
V+ NI V N N D ++L ++GV D+ +YN ++ C A A+++
Sbjct: 194 VSYNI-VINGFFNEGQVDKAYSL-----FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + + KGV K + TY+TI+ A+ MA V + M+ GV P+ +T++++I+
Sbjct: 248 F---QQMVEKGV-KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIID 303
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--------- 457
A V++A +F++M+ G +P+ N ++ +A D+A +F+
Sbjct: 304 GLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKP 363
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-----FVPNSHYSSFDKRF 509
++T+ + + D M K + T N ++ + +R
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Query: 510 ------SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGS 561
+P TY +L+ C + ++L + M G+ P+ + I++ G
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR--LKQAFSLFEEMKHYQIQPNLV 619
G + +L +M +G+SP+ + T I C +KR + + +F +MK + PN+V
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVI--CAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541
Query: 620 TYITLLRARSRYGSLHE 636
TY TL+ A + G + +
Sbjct: 542 TYGTLIDALCKLGRVDD 558
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 29/385 (7%)
Query: 267 GICGDYMKSRAIYEDLRSQ---NVTLNIYVFNSLMN-----VNAHDLKFTLEVYKNMQKL 318
G+C A++ LR L + +N+L+ A + + L + + Q
Sbjct: 128 GLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDS 187
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D+ SYNI++ G A ++ E+ + DV TY+TI+ A+
Sbjct: 188 SCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG-------VSPDVVTYNTIIDGLCKAQE 240
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V + M+ GV PN +T++++I+ A V+ A +F++M+ G +P++ N
Sbjct: 241 VDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNT 300
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A DRA +F+ D D ++ D +
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMI----------DRGVKPDHVTYNTIIDGLCKAQAIDKAE 350
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
DK KP TY I++ C R + + +M G+ PN+ ++ LI
Sbjct: 351 GVFQQMIDK--GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E +Q +K M + PDV Y + ++ + +A SLF+ M I+P
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468
Query: 617 NLVTYITLLRARSRYGSLHEVQQCL 641
++ Y +L + G+L E+ L
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLL 493
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 180/426 (42%), Gaps = 38/426 (8%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ TIID G+C K+ +++ + + V + + +++ A +
Sbjct: 328 PDHVTYNTIID--GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V++ M GV + +YN L+ G +E+ +K + A L+ DVFTY +
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW---EEVVQRIKEMSAHD-LEPDVFTYGLL 441
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + + M+ G+ P+ + +++ G + + L M+ G
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEH 484
PN + N ++ A + D +F + LS V G D R+ +
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561
Query: 485 KDKQSITN--TPN-FVPNS---------HYSSFDKRF------SFKPTTTTYNILMKACC 526
+ Q I TPN V NS + ++ F +P +N ++ C
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ ++A L++ M +GL P+ IS+ LID + ++ A+++L M G+ P++V
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T + ++ R+ A+ LF EM + P + TY T+L R G E ++ +Y
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE---LY 738
Query: 645 QDMWKA 650
+M K+
Sbjct: 739 VNMIKS 744
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 65/413 (15%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K+ + + + K+ SPN+ T+ID G + + +
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT N VFNSL+ + E++ M G+ D+ +N +L C G
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ A+ + + + G LK DV +Y+T++ A A+K+ + M+SAG+ PN ++
Sbjct: 627 MEARRL---IDSMVCMG-LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
+++L++ AG ++ A LF EML+ G P + N +L + +F A L+
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 457 ---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ W++ + L DG F N + FD+ F
Sbjct: 743 KSRKLWSICTYSIIL----DG---------------------FCKN---NCFDEAFK--- 771
Query: 514 TTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
I C D L + I++ I+ID G E A+ +
Sbjct: 772 ------IFQSLCSMD---------------LQLDIITFNIMIDGLFKGGRKEDAMDLFAA 810
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ +G+ P VV Y + + L++ LF M+ PN L+R
Sbjct: 811 IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIR 863
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S V P+ T+S +I G +E F +L+ G + N LL+ + +
Sbjct: 77 SNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136
Query: 451 RAFR-LFRSWTLSKTQ---VALGEDYDGNTDRISNMEHK-------DKQSITNTP----- 494
A L R + V+ G DR E + D Q + +P
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 495 NFVPNSHYS--SFDKRFSF------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
N V N ++ DK +S P TYN ++ C + R + + +M G+
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN++++ +ID + V+ A + + M + G+ P V Y T I +++ + +A
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+F++M ++P+ VTY T++ + ++ + + V+Q M G
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE---GVFQQMIDKG 360
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 179/418 (42%), Gaps = 44/418 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-- 307
+P++ T+I+ G C RA + E + + ++ + S+++ D K
Sbjct: 74 APDLVTYSTVIN--GFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E+ + M+ GV D +++ L+ C A A ++Y K + K DV TY+
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY---KEILTSSSWKPDVVTYT 188
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ F + + A+K+ M PN +T+SSL++ AG ++QA+ LF M
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 248
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDG--NTDRISNM 482
GC PN L+ A + D A L T + V+ DG RI
Sbjct: 249 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEA 308
Query: 483 EHKDKQSITNT--PNFVPNS-------HYSSFDK-RF---------SFKPTTTTYNILMK 523
+ K+ T + P+ + + + S ++ RF P TY+I++
Sbjct: 309 KQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 368
Query: 524 ACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y R K + EM ++PN ++++ LID +G V+ A+++LK M
Sbjct: 369 G----YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ P V + + I R + +A+ L M + ++P +VTY TLL SR G +
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 167/368 (45%), Gaps = 34/368 (9%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A+ LK L ++ M++ V + +YN+++ C A T A E+ E++ + K V
Sbjct: 19 KANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMR--DGKSVAP 75
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMH 419
D+ TYST++ F A ++ +M++ G+ P+ +T++S+++ G +++A
Sbjct: 76 -DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE 134
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------SW---TLSKTQVALGE 470
+ EM G EP+ + L+ A + D A +L++ SW ++ T + G
Sbjct: 135 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGF 194
Query: 471 DYDGNTDRISNM--EHKDKQSITNTPNFVPNSHY--------SSFD--KRFSFK---PTT 515
GN ++ M + ++ + N + H + D +R + K P
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254
Query: 516 TTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+ C ++V A LM+EM P+ +S+ L+D G +E A Q+ K
Sbjct: 255 VTYTTLIHGLCA-AHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRY 631
M PD + YT ++ + RL++A L E MK I P++VTY ++ SR
Sbjct: 314 EMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 373
Query: 632 GSLHEVQQ 639
E +
Sbjct: 374 KRFVEAAE 381
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 29/305 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T++ I+ F A + AL E M V PN T++ ++N A L +A + +
Sbjct: 7 VVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLK 65
Query: 423 EMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSW---------TLSKTQVALGEDY 472
EM P+ + ++ + + DRA + R ++ T V G
Sbjct: 66 EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTT 516
DG DR M + K F ++ Y S+KP
Sbjct: 126 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV 185
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ C KA ++ M PN ++++ L+ +G+++ AL + + M
Sbjct: 186 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 245
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G P+VV YTT I + ++ A L +EM P+ V+Y LL R G +
Sbjct: 246 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305
Query: 635 HEVQQ 639
E +Q
Sbjct: 306 EEAKQ 310
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 110/239 (46%), Gaps = 9/239 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
+ + + + K DL AL + PN+ T+I G+C + +R +
Sbjct: 220 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH--GLCAAHKVDAARLLM 277
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + + +N+L++ ++ +++K M + D +Y L++ C
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFC-- 335
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N +E +++++ + DV TYS +V ++ AK + A + ++M++ V PN
Sbjct: 336 -NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+SSLI+ AG V+ AM + + M+ EP+ N ++ A D A++L
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 111/254 (43%), Gaps = 51/254 (20%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +TW+ +I+ A ++QA+ FE+M + PN + N+++ +A +A+ +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+ E +D +S+ P
Sbjct: 64 LK-------------------------EMRDGKSVA---------------------PDL 77
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILK 572
TY+ ++ C + R ++ EM T G++P+ +++T ++D G ++ A ++++
Sbjct: 78 VTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVR 137
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRY 631
M+ G+ PD ++ I ++++ +A L++E + +P++VTY L+ +
Sbjct: 138 EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKS 197
Query: 632 GSLHEVQQCLAVYQ 645
G+L + + L V +
Sbjct: 198 GNLEKAMKMLGVME 211
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAVKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 125/336 (37%), Gaps = 74/336 (22%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ + ++ + N+ N+++ H L + + +M+K GV ++ +Y L+
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 333 ACCLAGNTVLAQEIYGEVKHLEA---------------------------------KGVL 359
ACC N + + +Y K LEA +G
Sbjct: 485 ACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
LD+ Y+ ++ +F D + ++ DM G P++IT+++LI+ E
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVER 602
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E+M + G +P ++ A + D A +LF+ L
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL------------------ 644
Query: 480 SNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK---------PTTTTYNILMKACCTD 528
H T N + N S +F + S K P TYN L K C +
Sbjct: 645 ----HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK-CLNE 699
Query: 529 YYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
+ + LM+EM PN I+ IL++ GS
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID + +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ + I + LID G ++ A ++L M+ E+ P+ V Y I R+ +L+ A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLETA 425
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ MK +I+PN+VT T++ R+ H + + + DM K G
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRH---HGLNMAVVFFMDMEKEG 471
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 175/418 (41%), Gaps = 65/418 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P + T+I+ G+C G++ ++ +++D+ ++ ++Y +N+++N +
Sbjct: 161 PTIVTFTTLIN--GLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAA 218
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ K M++ G +M +Y+ L+ + C L E +++AKG+ D+FTY+++
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLC---RDRLVNEALDIFSYMKAKGI-SPDIFTYTSL 274
Query: 370 VKVFADAKWWQ-----------------------------------MALKVKEDMLSAGV 394
++ W+ AL V + M GV
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T+SSL+ + V +A LF M+ GC+PN NIL+ +A + D A +
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 455 LFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
LF L+ V+ G E +D N N +
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR-----NMCTNGNL--------- 440
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY+IL+ C Y KA L M++ L PN + +TIL+ A SGN + A +
Sbjct: 441 -PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK 499
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + G+ P V YTT I + L +A F M+ P+ ++Y ++R
Sbjct: 500 LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 177/436 (40%), Gaps = 62/436 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ F + K + A+ +D P++Y TII+ G+C G+ + +
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN--GLCKIGETAAAAGLL 221
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + N+ +++L++ D + L+++ M+ G+ D+ +Y L++ C
Sbjct: 222 KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKF 281
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A + E+ L + D+ T++ +V F AL V + M GV PN
Sbjct: 282 SRWKEASALLNEMTSLN----IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+SSL+ + V +A LF M+ GC+PN NIL+ +A + D A +LF
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF- 396
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ M H Q +T P +
Sbjct: 397 ----------------------NEMIH---QGLT---------------------PNNVS 410
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ C + L M T G P+ +++IL+D G + A ++ + M+
Sbjct: 411 YNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ P++V YT + +S K A LF E+ +QP++ Y T++ + G L
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLD 530
Query: 636 EVQQCLAVYQDMWKAG 651
E L +++M G
Sbjct: 531 EA---LEAFRNMEADG 543
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 173/395 (43%), Gaps = 59/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + + + R + AL + K SP+++ ++I G+C + ++ A+
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ--GLCKFSRWKEASALL 291
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S N+ +I FN L++ + K + L V K M ++GV ++ +Y+ L+ L
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ V A++++ H+ K ++F+Y+ ++ + AK A+++ +M+ G+TPN
Sbjct: 352 TDVVEARKLF----HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++++LI+ G + +A LF M G P+ +ILL + +AFRLFR
Sbjct: 408 NVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFR 467
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ S Y KP
Sbjct: 468 AM---------------------------------------QSTY--------LKPNLVM 480
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ A C ++ + L +E+ GL P+ +T +I+ G ++ AL+ + M
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
DG PD ++Y I+ ++ K +A L EM+
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR 575
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 155/376 (41%), Gaps = 41/376 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NIY + MN DL F+ V + KLG+ + ++ L+ C G A E
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFS--VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + + AKG + DV+TY+TI+ A + + M AG PN +T+S+LI
Sbjct: 185 LFDD---MVAKGC-QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LS 462
++ LV +A+ +F M G P+ L+Q + ++ A L T +
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300
Query: 463 KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
V D E K + PN V YSS +S
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT---YSSLMYGYSLWTDVVEA 357
Query: 512 ------------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+ C +A L NEM GL+PN++S+ LI
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A + + M +G PD+ Y+ + + L +AF LF M+ ++PN
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477
Query: 618 LVTYITLLRARSRYGS 633
LV Y L+ A + G+
Sbjct: 478 LVMYTILVHAMCKSGN 493
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 53/338 (15%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G L +++T S + F + + V ++ G+ P +T+++LIN
Sbjct: 117 KQMELVG-LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCK 175
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G QA+ LF++M+ GC+P+ N ++ + + A L + + Q +
Sbjct: 176 VGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNM-V 234
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
Y D + +D+ F S+ K P TY L++ C +
Sbjct: 235 TYSTLIDSLC----RDRLVNEALDIF-------SYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ AL+NEM ++ + P+ +++ +L+D G V AL +LK M E G+ P+VV Y++
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 589 AI---------------------KVC--------------VRSKRLKQAFSLFEEMKHYQ 613
+ K C ++KR+ +A LF EM H
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN V+Y TL+ + G L E Q ++++M G
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQD---LFRNMCTNG 438
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 111/287 (38%), Gaps = 55/287 (19%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S IVK+ +++ + + + + M G++PN T S +N V+ + ++++
Sbjct: 100 SAIVKM---GQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIK 156
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G +P L+ + +F +A LF Q
Sbjct: 157 LGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQ--------------------- 195
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
P TYN ++ C + L+ +M G
Sbjct: 196 --------------------------PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++++ LID+ V AL I M+ G+SPD+ YT+ I+ + R K+A +
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L EM I P++VT+ L+ + G +V + L V + M + G
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEG---KVSEALGVLKTMTEMG 333
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 195/436 (44%), Gaps = 49/436 (11%)
Query: 215 CIVPRADILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GD 271
C VP ++F N + + + KK DL A RA + K P + +I+ G C G+
Sbjct: 235 CCVPH--VVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALIN--GFCKAGE 290
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMAS 326
+ + ++ ++ + +N+ VFN++++ + K+ L E+ + M ++G D+ +
Sbjct: 291 FEAVDQLLTEMAARGLNMNVKVFNNVIDA---EYKYGLVTEAAEMLRRMAEMGCGPDITT 347
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI++ C G A E+ + K +G+L + F+Y+ ++ + + A +
Sbjct: 348 YNIMINFSCKGGRIEEADELLEKAKE---RGLLP-NKFSYTPLMHAYCKKGDYVKASGML 403
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ G + +++ + I+ AG ++ A+ + E+M++ G P++Q NIL+
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGL--- 460
Query: 447 CQFDR--AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ R A +L S L + N++ T F+ N
Sbjct: 461 CKKGRIPAMKLLLSEMLDR-----------------NVQPDVYVFATLIDGFIRNGELDE 503
Query: 505 FDKRF------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILID 556
K F P YN ++K C AL +NEM +V +P+ +++ +ID
Sbjct: 504 AIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVID 563
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
++ AL++ M + P+V+ YT+ I + + +A +F MK + + P
Sbjct: 564 GYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVP 623
Query: 617 NLVTYITLLRARSRYG 632
N+VTY TL+ + G
Sbjct: 624 NVVTYTTLVGGFFKAG 639
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 53/319 (16%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN+++ C G+ A E+K KGVL V TY ++ F A ++ ++
Sbjct: 243 YNMIIDGYCKKGDLQCATRALNELK---MKGVLP-TVETYGALINGFCKAGEFEAVDQLL 298
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+M + G+ N ++++I+A GLV +A + M + GC P+ NI++ +
Sbjct: 299 TEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKG 358
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ + A L K K+ +PN
Sbjct: 359 GRIEEADELLE---------------------------KAKER-----GLLPN------- 379
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+FS+ P LM A C DY + ++ + +G + +S+ I +G +
Sbjct: 380 -KFSYTP-------LMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEI 431
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL + + M E G+ PD Y + + R+ L EM +QP++ + TL
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATL 491
Query: 625 LRARSRYGSLHEVQQCLAV 643
+ R G L E + V
Sbjct: 492 IDGFIRNGELDEAIKIFKV 510
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 34/304 (11%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LD +S+++K+ A + + V E+M + + P +S+LI A A +G +++A+ L
Sbjct: 93 LDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQL 152
Query: 421 FEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
F + + C P N+LL V++ + D A +L+ + +T G D T I
Sbjct: 153 FHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDK--MLQTDDGTGAVVDNYTTSI 210
Query: 480 --------SNMEH-----KDKQSITNTP-----NFVPNSHYSSFD-----------KRFS 510
+E K + P N + + + D K
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
PT TY L+ C ++ V L+ EM GL+ N + +IDA G V A
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L+ M E G PD+ Y I + R+++A L E+ K + PN +Y L+ A
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390
Query: 629 SRYG 632
+ G
Sbjct: 391 CKKG 394
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G + + ++ +NV ++YVF +L++ + +L ++++K + + GV
Sbjct: 459 GLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDP 518
Query: 323 DMASYNILLKACCLAG------------NTV--------LAQEIYGEVKHLEAKGVLKL- 361
+ YN ++K C G N+V + I G VK + LK+
Sbjct: 519 GIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMF 578
Query: 362 ----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+V TY++++ F A KV M S + PN +T+++L+ A
Sbjct: 579 GQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKA 638
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
G E+A +FE ML GC PN + L+
Sbjct: 639 GKPERATSIFELMLMNGCLPNDATFHYLING 669
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 64/296 (21%)
Query: 127 GRIDCVVGVLKKLNELGVAPLE-----LFDG-------SGFKLLKNECQRLLDSGEVEMF 174
G ID + V +K+ E GV P L G KLL +E +LD V+
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSE---MLDR-NVQPD 484
Query: 175 VGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKK 234
V + L + + ELDE +I ++ + K + Y ++ FC +FGK
Sbjct: 485 VYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG----FC----KFGKM 536
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
D +S L + S H +P+ Y T+ID Y+K
Sbjct: 537 TDALSCLNEMN-SVHH--APDEYTYSTVID------GYVKQ------------------- 568
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
HD+ L+++ M K ++ +Y L+ C + + A++++ +K +
Sbjct: 569 --------HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD 620
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L +V TY+T+V F A + A + E ML G PN T+ LIN N
Sbjct: 621 ----LVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTN 672
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 139/343 (40%), Gaps = 53/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K + YK + + G A + +NI++ C G AQ ++ + K L+ V
Sbjct: 117 FKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAI----TKWGLRPSVV 172
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++T++ + ++K M ++GV P+ T+S LIN V++A LF EM
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEM 232
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + D A ++
Sbjct: 233 LDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIY---------------------------- 264
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ F P TYN L+ C D +V+AL++EM
Sbjct: 265 --KQMLSQ-----------------GFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G++E A + K M ++ + D VAYT + + R A
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDA 365
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+F EM ++P+ TY ++ + G + + L Q
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 162/378 (42%), Gaps = 33/378 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DI +F + + + + A++ + +KKH CR +++ +
Sbjct: 63 RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
Y+++ ++Y FN +M+ +++ V+ + K G+ + S+N L+
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ +ML G+
Sbjct: 183 RLGD---LDEGFRLKSAMHASGV-QPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G+V+ AM ++++ML G P+ N L+ + + L
Sbjct: 239 PNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRAL 298
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKD---KQSITNTPNFVPNSHYSSFDKRF--- 509
+++ + D+I+ D K+ T F KR
Sbjct: 299 IDEMSMNGLK----------PDKITYTTLIDGCCKEGDLETA--------FEFRKRMIKE 340
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
S + Y L+ C + A + EM +VGL P++ ++T++I+ G+V A
Sbjct: 341 SIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTA 400
Query: 568 LQILKIMREDGMSPDVVA 585
++LK M+ DG P VV
Sbjct: 401 SRLLKEMQRDGHVPCVVT 418
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 87/412 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS-EVLR 316
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+++G++ D SYNIL++ C G N
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 377 KIEAAEIL--IREIREKGIV-LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S P TYN
Sbjct: 494 DM-----------------------------------------------MSINPDDVTYN 506
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 180/442 (40%), Gaps = 40/442 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + R + A+ + K+ P C I+ + +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV LK M+ G+ + +YN L++ L
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 273 RGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVP 325
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 457 RSWTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSF---- 505
R S T L Y + D D+ T P Y+S
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM---TDGIQPTQFTYTSLIYVL 442
Query: 506 ---------DKRF------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
D+ F KP N LM C + R +L+ EM + ++P+
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ L+ G G E A +++ M+ G+ PD ++Y T I + K AF + +E
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 609 MKHYQIQPNLVTYITLLRARSR 630
M P L+TY LL+ S+
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSK 584
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 58/326 (17%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M ++ + +++ ++NI++ C G A+ G +E G+ K + TY+T+V+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG---IMEVFGI-KPTIVTYNTLVQ 268
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ + A + +M S G P+ T++ +++ N G +A + EM + G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVP 325
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S NIL++ C + AF +R + + V
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFA-YRDEMVKQGMV------------------------- 359
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
PT TYN L+ + +++A L+ E+R G+ +
Sbjct: 360 ---------------------PTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDS 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ILI+ G+ + A + M DG+ P YT+ I V R + ++A LFE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSL 634
+ ++P+LV TL+ G++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNM 483
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T +TI + L+ C +V++A+ F M + G P ++ CN +L R R
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL------LSRLNR 205
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQS-----ITNTPNFVPN-SHY 502
+ +W + + N + M E K K++ I P Y
Sbjct: 206 IENAWVFYADMYRM--EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 503 SSFDKRFS-------------------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
++ + FS F+P TYN ++ C + R ++ EM+ +G
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG-RASEVLREMKEIG 322
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ +S+ ILI C +G++E A M + GM P Y T I +++ A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L E++ I + VTY L+ ++G + ++ A++ +M G
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFALHDEMMTDG 427
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 104/283 (36%), Gaps = 52/283 (18%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+K +V+T++ ++ V + A M G+ P +T+++L+ + G +E A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ EM G +P+ Q N +L C RA + R
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSW---MCNEGRASEVLREM------------------- 318
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
K P + +YNIL++ C D A
Sbjct: 319 ----------------------------KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+EM G+ P ++ LI +E A +++ +RE G+ D V Y I +
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
K+AF+L +EM IQP TY +L+ R E +
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 141/320 (44%), Gaps = 34/320 (10%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEM-FVGLMEVLEEFRLPVKELDE 193
VL+++ E+G+ P D + +L C ++G++EM F E++++ +P
Sbjct: 314 VLREMKEIGLVP----DSVSYNILIRGCS---NNGDLEMAFAYRDEMVKQGMVPT----- 361
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRA---------DILFCNFVREFGKKRDLVSALRAY 244
F ++ + I A I+ R + + + + + D A +
Sbjct: 362 -FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----V 300
D P + ++I V ++ ++E + + + ++ + N+LM+ +
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
D F+L K M + + D +YN L++ C G A+E+ GE+K +G+ K
Sbjct: 481 GNMDRAFSL--LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR---RGI-K 534
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D +Y+T++ ++ + A V+++MLS G P +T+++L+ + E A L
Sbjct: 535 PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Query: 421 FEEMLQAGCEPN-SQCCNIL 439
EM G PN S C+++
Sbjct: 595 LREMKSEGIVPNDSSFCSVI 614
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ ++ + +N LM + KF E+
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL----LTYNALLK 580
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++A ++ +M S G+ PN ++ S+I A +N
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 173/440 (39%), Gaps = 86/440 (19%)
Query: 227 FVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIID----------VCGICGDYMKS 275
F R R L + RA +D ++P +Y +ID V +CG+
Sbjct: 106 FARAGAPDRALKTFYRAVHDLGCARPTAPRLY--NHLIDALLRENMVGAVALVCGN---- 159
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+R V N++ +N L+ H + ++ M G D +Y ++ A
Sbjct: 160 ------MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSA 213
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E+ + A +Y+ ++ Q V DM+ G
Sbjct: 214 LCTLGRVDEATEVLSAAPPVAA---------SYNAVILALCREFRMQEVFAVVGDMVGRG 264
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PN IT+++++NA AG + A + M+ GC PN L+ F+
Sbjct: 265 LQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGG-----LFNDG- 318
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+ + + K VA G + P
Sbjct: 319 RVHDALDMWKCMVAEG-----------------------------------------WAP 337
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+T +YN+L++ C+ D +++N+M G PN +++ LID +G+++GA+ I
Sbjct: 338 STVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIW 397
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M G P+VV YT + V + QA SL ++M PN VT+ TL+R+
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLC-- 455
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
+ V + L V+ +M + G
Sbjct: 456 -NCRRVGRALGVFHEMRRHG 474
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 128/329 (38%), Gaps = 53/329 (16%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
DLK V +M++ G + +Y+ L+ AG+ A I+ ++ + K +V
Sbjct: 354 DLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMT----RSGCKPNV 409
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+ +V VF + A + + ML PNT+T+++LI + N V +A+ +F E
Sbjct: 410 VVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHE 469
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC PN + N LL LFR G D I
Sbjct: 470 MRRHGCPPNGRTYNELLHG------------LFRE----------GNCGDALQMVIEMQN 507
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
H + S+ TYN ++ C +A+ + M
Sbjct: 508 HGIELSL-------------------------VTYNTVVSGLCQMRMGREAMFFVGRMIV 542
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T +I A G V A IL M +++ YT + +L+
Sbjct: 543 RGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLED 602
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSR 630
A +M + I PN VT+ L+R R
Sbjct: 603 AMVYLLKMLYEGIYPNTVTWNVLVRGVFR 631
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYED 281
+ + F K DL A+ ++ + PN+ + ++ V C M ++ ++ +
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGV--FCKKLMFNQAESLIDK 434
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N N FN+L+ N + L V+ M++ G + +YN LL GN
Sbjct: 435 MLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGN 494
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ V ++ G+ +L + TY+T+V + + A+ M+ G+ P+
Sbjct: 495 CGDALQM---VIEMQNHGI-ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T++++I+A G V A + M C N IL+ E C D+
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILM---AELCNQDK 599
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 6/223 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ N V F KK A D PN T+I C ++ ++ +
Sbjct: 410 VVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHE 469
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R N +N L++ + L++ MQ G+ + +YN ++ C
Sbjct: 470 MRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLC---Q 526
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +E V + +G+ + D FT++ I+ + +MA + M N +
Sbjct: 527 MRMGREAMFFVGRMIVRGI-QPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNIL 585
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ L+ N +E AM +ML G PN+ N+L++
Sbjct: 586 VYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 195/453 (43%), Gaps = 37/453 (8%)
Query: 203 NKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTI 262
N PDV + Y+ IV +C V + GK L+ L+ +K L PN Y +I
Sbjct: 283 NVPDV---VSYSVIVDG----YCQ-VEQLGKVLKLMEELQ-----RKGLK-PNQYTYNSI 328
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGV 320
I G +++ + +++Q + + V+ +L++ ++E ++ M++ +
Sbjct: 329 ISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI 388
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ D +Y ++ C AG V A++++ E + +KG LK D TY+ ++ + A +
Sbjct: 389 VPDFVTYTSMIHGLCQAGKVVEARKLFSE---MLSKG-LKPDEVTYTALIDGYCKAGEMK 444
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + M+ G+TPN +T+++L++ G V+ A L EM + G +PN N L+
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++A +L L+ D I+ D
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGF----------FPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
DK +PT T+N+LM C + L+ M G+ PN ++ L+
Sbjct: 555 LRIMLDK--GLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
N+ ++I K M G+ PD Y IK +++ +K+A+ L +EM
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+Y +L++ + E ++ ++++M G
Sbjct: 673 ASYNSLIKGFYKRKKFEEARK---LFEEMRTHG 702
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 19/349 (5%)
Query: 301 NAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
N+ D ++ V++ ++GV + SYNI+L C G +E + + +E +G +
Sbjct: 228 NSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGK---VKEAHSLLIQMEFRGNV 284
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV +YS IV + + LK+ E++ G+ PN T++S+I+ G V +A
Sbjct: 285 P-DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ M P++ L+ ++ ++LF K + D+ T I
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK----IVPDFVTYTSMI 399
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
+ K V S KP TY L+ C + +L N
Sbjct: 400 HGLCQAGK--------VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M GL+PN +++T L+D G V+ A ++L M E G+ P+V Y I +
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++QA L EEM P+ +TY T++ A + G + + + L + D
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 20/368 (5%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ AI+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A ++ E+K + K+ Y+ +V +F AL + E+M
Sbjct: 237 ISAFCKLGRRDSAIQLLNEMKDNGMQPTTKI----YTMLVALFFKLNDVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H F EM + GC P++ N ++ +A + D
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A +LF+ T + NT + E K + S P++ K
Sbjct: 353 DAMKLFQEMG---TLRCIPSVVTYNTIIKALFESKSRAS--EVPSWFERM------KESG 401
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P++ TY+IL+ C KA+M EM G P ++ LIDA G + + A
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + ++E+ S Y IK ++ RL A ++F+EM P++ Y L+
Sbjct: 462 ELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 629 SRYGSLHE 636
+R G L E
Sbjct: 522 ARTGMLDE 529
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 56/291 (19%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D TY ++ + + K+ ++M+ VTP + S ++ NA +V +A+
Sbjct: 122 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTEL--SEVVRMLGNAKMVSKAI 179
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+++ L+ +
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELY--------------------NE 219
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+S H F P T TY+ L+ A C R A L+
Sbjct: 220 MSTEGH-------------------------CF-PDTMTYSALISAFCKLGRRDSAIQLL 253
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
NEM+ G+ P +T+L+ +V GAL + + MR PDV YT I+ ++
Sbjct: 254 NEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 313
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
R+ +A+ F EM+ +P+ + ++ + G L + + ++Q+M
Sbjct: 314 GRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDA---MKLFQEM 361
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---- 277
I+ N + GK L A++ + P++ TII KSRA
Sbjct: 336 IVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFES----KSRASEVP 391
Query: 278 -IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+E ++ ++ + + ++ L++ + ++ + + + M + G A+Y L+ A
Sbjct: 392 SWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 451
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A LA E++ E+K E G V Y+ ++K A A+ + ++M G
Sbjct: 452 GKAKRYDLACELFQELK--ENCGSSSSRV--YAVMIKHLGKAGRLDDAINMFDEMNKLGC 507
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +++L++ A G++++A+ M + GC P+ NI+L
Sbjct: 508 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAIN 497
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKA 333
+++++ ++Y +N+LM+ A L L + MQ+ G + D+ SYNI+L
Sbjct: 498 MFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 23/344 (6%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ YN ++ C + A +++ +
Sbjct: 221 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK--- 275
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ K DVFTY+ ++ + W A ++ DML + P+ + +++LI+A G
Sbjct: 276 METKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 413 LVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ +A L++EM+++ C P+ N L++ + + + +FR +S+ +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE--MSQRGLV---- 388
Query: 472 YDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
GNT + + H Q+ + V S P TYNIL+ C +
Sbjct: 389 --GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-----GVHPDIMTYNILLDGLCNNGN 441
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL+ M+ + + +++T +I+A +G VE + + G+ P+VV YTT
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 58 DAIGLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+I + C LA I G++ L + T ++++ F
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP----SIVTLNSLLNGFCHGNRISE 163
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++L++ +A+ L E M+ GC+P+ ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L K + + Y+ D + +H D
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADV-VIYNTIIDGLCKYKHMDDA------------- 269
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID 556
+ F+K + KP TYN L+ +C +Y R L+++M ++P+ + + LID
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 557 ACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A ++ ++++ PDVVAY T IK + KR+++ +F EM +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 616 PNLVTYITLLRA 627
N VTY TL+
Sbjct: 389 GNTVTYTTLIHG 400
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ C G LA + +++ KG ++ DV Y+TI+ K
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME----KGKIEADVVIYNTIIDGLCKYKH 265
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M + G+ P+ T++ LI+ N G A L +ML+ P+ N
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L+ SK
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCF-------------------------------- 353
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
P YN L+K C Y RV+ M EM GL N +++T LI
Sbjct: 354 --------------PDVVAYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ + + A + K M DG+ PD++ Y + + ++ A +FE M+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 616 PNLVTYITLLRARSRYGSLHE 636
++VTY T++ A + G + +
Sbjct: 459 LDIVTYTTMIEALCKAGKVED 479
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK--- 274
D++F N + F K+ LV A + YD KH P++ T+I G C Y +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-CFPDVVAYNTLIK--GFC-KYKRVEE 374
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ ++ + + N + +L++ A D V+K M GV D+ +YNILL
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++ ++ K +KLD+ TY+T+++ A + + +
Sbjct: 435 GLCNNGNVETALVVFEYMQ----KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
GV PN +T++++++ GL E+A LF EM + G PNS N L++A
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL + +K ++ I TIID G+C A ++ + ++ + +++ +N L
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIID--GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ N + +M + + D+ +N L+ A G V A+++Y E+ +++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM--VKS 349
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K DV Y+T++K F K + ++V +M G+ NT+T+++LI+ A +
Sbjct: 350 KHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A +F++M+ G P+ NILL + A +F + K + L D
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE--YMQKRDMKL--DIVTY 464
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VK 533
T I + K + + + + S + KP TY +M C +
Sbjct: 465 TTMIEALCKAGK--VEDGWDL-----FCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL EM+ G PN ++ LI A G+ + +++K MR G + D + +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM- 575
Query: 594 VRSKRLKQAF 603
+ RL ++F
Sbjct: 576 LHDGRLDKSF 585
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 106/291 (36%), Gaps = 52/291 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS + F +AL + M+ G P+ +T +SL+N + + +A+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M++ G +P++ L+ + + A L + Q
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------------- 212
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
P TY ++ C AL +N+M
Sbjct: 213 -------------------------------PDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + + +ID +++ A + M G+ PDV Y I R
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
A L +M I P+LV + L+ A + G L E ++ +Y +M K+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK---LYDEMVKS 349
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ L+ A + V +L +M+ +G+S N +++I I+ + AL I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + R+ +A +L ++M QP+ VT+ TL+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 631 YGSLHE 636
+ E
Sbjct: 193 HNKASE 198
>gi|356544435|ref|XP_003540656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1071
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 144/348 (41%), Gaps = 57/348 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTL 309
PN++ +I C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 507 PNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDV 566
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + LLKAC AG AQE+Y V+ KG ++ Y+
Sbjct: 567 LAEMAAETQPIDPDHVTIGALLKACTKAGQVERAQEVYKMVQKYNIKGCPEV----YTIA 622
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V DM G+ P+ I S+LI+ +A ++ A + +E + G
Sbjct: 623 INSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEAHKGGI 682
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + L+ AC A + +A L+
Sbjct: 683 QIGIMSYSSLMGACSNARNWQKALELYE-------------------------------- 710
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL + EM+ +GLSPN
Sbjct: 711 ---------------YLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLSPN 755
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I+++ILI A ++E A IL + ++DG++P+++ I +C R
Sbjct: 756 SITFSILIVASEKKDDMEAAQMILSLAKKDGVAPNLIMCRCIIGMCQR 803
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 139/306 (45%), Gaps = 16/306 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L+ D Y+T++ A + +
Sbjct: 439 LSTFNMLMSVCASSQDS----EGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMF 494
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI CA AG V +A + M +P+ N L+ AC
Sbjct: 495 EVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAAC 554
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + ++TQ D + I + ++ T
Sbjct: 555 AQSGAVDRAFDVLAEMA-AETQ-----PIDPDHVTIGAL----LKACTKAGQVERAQEVY 604
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++++ K Y I + +C D+ + + N+M G+ P+ I + LID G +
Sbjct: 605 KMVQKYNIKGCPEVYTIAINSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHA 664
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A +L+ + G+ +++Y++ + C ++ ++A L+E +K ++ + T
Sbjct: 665 KKLDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTV 724
Query: 622 ITLLRA 627
LL A
Sbjct: 725 NALLTA 730
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ + L PN + ++ +L+ C S + EGA Q+L+++++ + PD YTT I
Sbjct: 422 KAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLYTTLI 481
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
C +S ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 482 LTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAG---QVAKAFGAYGIM 535
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R P +T+N+LM C + ++V L+ + R L P+ +T LI C SG
Sbjct: 432 RLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDAR---LEPDCKLYTTLILTCAKSG 488
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V +
Sbjct: 489 KVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAFGAYGIMRSKNVKPDRVVFN 548
Query: 623 TLLRARSRYGSLHEVQQCLA 642
L+ A ++ G++ LA
Sbjct: 549 ALIAACAQSGAVDRAFDVLA 568
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 118/306 (38%), Gaps = 58/306 (18%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +E KG+L + ++ + K A+K D + P T++ L++ CA
Sbjct: 395 LKDMETKGLLDMSKVYHAKFFNICKKRK----AVKEAFDFIRLIPNPMLSTFNMLMSVCA 450
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
++ E A + + + A EP+ + L+ C ++ + D F +F S +
Sbjct: 451 SSQDSEGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVE---- 506
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
PN H TY L+ C
Sbjct: 507 ----------------------------PNVH---------------TYGALIGGCARAG 523
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVA 585
KA MR+ + P+ + + LI AC SG V+ A +L M + + PD V
Sbjct: 524 QVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDHVT 583
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+K C ++ ++++A +++ ++ Y I+ Y + + S+ G + + VY
Sbjct: 584 IGALLKACTKAGQVERAQEVYKMVQKYNIKGCPEVYTIAINSCSQTG---DWEYARTVYN 640
Query: 646 DMWKAG 651
DM + G
Sbjct: 641 DMTQKG 646
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 169/393 (43%), Gaps = 56/393 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A RA+D ++ +I G ++ + E ++ + +N++++
Sbjct: 228 ARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVID 287
Query: 300 V---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
DL+FTL ++ M + G+ D ++N LL AC AG+ A+ ++ E+ HL +
Sbjct: 288 ACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSG 347
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D++TY+T V +AL+V DM + PN +T+S+L++ + ++
Sbjct: 348 ----RDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDE 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L E+M + + C N LL V+ ++D T+ + LG + D
Sbjct: 404 ALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIA------TVCEEMEKLGIEKD--- 454
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKA 534
T TYN L+ V
Sbjct: 455 --------------------------------------TVTYNSLINGYGKQGRLDMVAF 476
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L+ +MR G++P+ ++++ LID +G A + +E G+ DVV +++ I
Sbjct: 477 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 536
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ ++ A SL +EM I+PN+VTY T++ A
Sbjct: 537 KNGLVECALSLLDEMMKMGIKPNVVTYNTIIDA 569
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 141/319 (44%), Gaps = 37/319 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLF 421
VF +S ++ +A + A+ V E M AG+ P T++++++I+AC G+ + + F
Sbjct: 244 VFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYF 303
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTDR 478
+MLQ G P+ + N LL AC A + A +F + G D Y+ D
Sbjct: 304 RQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMI----HLGSGRDIYTYNTFVDA 359
Query: 479 I---SNMEHK-----DKQSITNTPNFVPNS-------HYSSFDKRFSFKPTTTTYNILMK 523
I NM D ++ PN V S +D+ + + I +
Sbjct: 360 ICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLD 419
Query: 524 ACCTD-----------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
C + Y + + EM +G+ + +++ LI+ G G ++ +++
Sbjct: 420 RVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQ 479
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
MR G++P V+ Y+T I + ++ AF+++ + K ++ ++V + + + ++ G
Sbjct: 480 DMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNG 539
Query: 633 SLHEVQQCLAVYQDMWKAG 651
V+ L++ +M K G
Sbjct: 540 L---VECALSLLDEMMKMG 555
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 171/405 (42%), Gaps = 50/405 (12%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
+ PN+ T++D Y ++ + E ++S + L+ +N+L+ + K+
Sbjct: 381 AKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIA 440
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
V + M+KLG+ D +YN L+ G + + V+ + A+GV V TYST+
Sbjct: 441 TVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFL---VQDMRAQGVAP-SVLTYSTL 496
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +++ A A V D +G+ + + +SS I+ A GLVE A+ L +EM++ G
Sbjct: 497 IDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGI 556
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N ++ A F ++ ++F + + Y G R++N + +S
Sbjct: 557 KPNVVTYNTIIDA------FGKS-KIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRS 609
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
T ++ M+ + + + L +M G+ PN +
Sbjct: 610 AT---------------------------DVRMRR-SQELFFILELFQKMVQQGVRPNVV 641
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ +++AC + E A +L+ +R S VAY + + QA SLF ++
Sbjct: 642 TFSAILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLMG---HREAWSQARSLFNQL 698
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AVYQDMW 648
+ Y L +G QQ + V+++ W
Sbjct: 699 GRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVWENTW 743
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 53/319 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M+ G D+ +YN+L+ C G E + ++ + G + +V T++
Sbjct: 102 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRL---DEAIKFLNNMPSYGC-QPNVITHNI 157
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + E K +
Sbjct: 218 CTPNSLSYNPLLHGFCK-------------------------------------EKKMDR 240
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+I V Y P TYN L+ A C D A ++N++ + G SP
Sbjct: 241 AIEYLDIMVSRGCY----------PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 290
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
I++ +ID G E A+++L MR G+ PD++ Y++ + R ++ +A F
Sbjct: 291 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 350
Query: 607 EEMKHYQIQPNLVTYITLL 625
+++ I+PN +TY +++
Sbjct: 351 HDLEGLGIRPNAITYNSIM 369
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 138/340 (40%), Gaps = 56/340 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
N Q L ++ ++ ++ C A ++ E+++ KG K DV TY+ ++
Sbjct: 72 NQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRN---KGS-KPDVVTYNVLINGI 127
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A+K +M S G PN IT + ++ + + G A L +ML+ GC P+
Sbjct: 128 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 187
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
NIL+ RA + + T
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGC----------------------------T 219
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISW 551
PN + +YN L+ C + +A+ ++ M + G P+ +++
Sbjct: 220 PN-------------------SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+ A G V+ A++IL + G SP ++ Y T I + + ++A L +EM+
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+++TY +L+ SR G +V + + + D+ G
Sbjct: 321 KGLKPDIITYSSLVSGLSREG---KVDEAIKFFHDLEGLG 357
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 203 NKPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDAS 247
+KPDV N+ I C R D I F N + +G + R + S R DA
Sbjct: 113 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 172
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
K + SP++ +I+ +C + RAI E + T N +N L++
Sbjct: 173 KLLSDMLRKGCSPSVVTFNILINF--LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 230
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ K +E M G D+ +YN LL A C G +A EI + L +KG
Sbjct: 231 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI---LNQLSSKG 287
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + TY+T++ + + A+K+ ++M G+ P+ IT+SSL++ + G V++A
Sbjct: 288 CSPV-LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 346
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ F ++ G PN+ N ++ ++ Q DRA F ++ +SK
Sbjct: 347 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISK 391
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI-YEDLR-SQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI Y D+ S+ +I +N+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLH--GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L+ D K +E+ + G + +YN ++ G T A ++ E++
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR-- 320
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK D+ TYS++V + A+K D+ G+ PN IT++S++ +
Sbjct: 321 -KG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ C+P IL++
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEG 406
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/592 (20%), Positives = 244/592 (41%), Gaps = 58/592 (9%)
Query: 59 LLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVAS 118
L S R+ LS Y + KDGR+EE +V+ + K + ++ VA
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--------KETGDIVVDEVAY 327
Query: 119 GIVKS--IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVG 176
G++ + + GR+D V ++ + G+ + LF + L G +E
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIH-VNLF------VYNTMINGLCKLGRMEEVQK 380
Query: 177 LMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPR-----ADILFCNFVREF 231
+++ +E+ + + I C + + A ++ R + + ++ F
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYC-REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
+ ALR + K +PN C T++D G ++ ++++ ++ + N+
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
FN+++N + E+ M++L D +Y L C G A + +
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 350 VKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++HL A V + F + AK W + +M + G++PN +T+ +LI
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFI-----AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G + +A +L+ EM+ G PN C+ L+ + + D A + +
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV-------- 666
Query: 469 GEDYDGNTDRIS--NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
N D I ++ + I++ + + + + S +N+++ C
Sbjct: 667 ------NIDMIPGCSISTIEIDKISHVVDTIADGNPHS---------ANVMWNVIIFGLC 711
Query: 527 TD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
K+L +R P++ +++ LI C SG+++ A + +M G++P+++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
Y + I +S +L +A +LF +++ I PN +TY TL+ + G E
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 68/378 (17%)
Query: 269 CGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVN-----AHDLKFTLEVYKNMQKLGVM 321
C D ++A+ E++ + +N+ ++++M+ D + LE ++Q+ G+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE---SLQRKGLS 285
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y +L+K C G A+ + VK ++ G + +D Y ++ +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERV---VKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A +V+ +M AG+ N ++++IN G +E+ + +EM G P+ N L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+AF + R
Sbjct: 403 GYCREGSMRKAFEMCRMMV----------------------------------------- 421
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILID 556
R TT TYN L+K C+ D R+ LM + G++PN IS + L+D
Sbjct: 422 ------RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR---GVAPNEISCSTLLD 472
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+G E AL + K G++ +V+ + T I + R+ +A L + MK + P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 617 NLVTYITLLRARSRYGSL 634
+ +TY TL + G L
Sbjct: 533 DSLTYRTLFDGYCKLGQL 550
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 31/380 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y D V+ ++ + + +A L L V+ M K+G + S N LL +
Sbjct: 140 VYRDFTFSAVSFDLLL---RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ +A +YG+++ GVL D FT + + K + A++ E+M G+ N
Sbjct: 197 GDPGMAAMVYGQMR---IAGVLP-DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + ++++ G E A + E + + G PN +L++ + + + A R+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 458 ----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + +VA G +G R M+ D + N H + F
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQR-GRMD--DATRVRNEMRDA-GIHVNLF-------- 360
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN ++ C V+ ++ EM VG+ P+ S+ LID G++ A ++
Sbjct: 361 ---VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++M +G++ + Y T +K + A L+ M + PN ++ TLL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + +Q L ++++ G
Sbjct: 478 G---KTEQALNLWKETLARG 494
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N+++ C +G A+ ++ + L K L D FTYS+++ A + A ++
Sbjct: 703 WNVIIFGLCKSGRIADAKSLF---ESLRNKRFLP-DNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ MLSAG+TPN IT++SLI +G + +A++LF ++ G PN N L+ +
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Query: 447 CQFDRAFRL 455
+ AF+L
Sbjct: 819 GKTTEAFKL 827
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 33/188 (17%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T+SSLI+ CA +G +++A L + ML AG PN N L+ ++ + RA L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F QS +PN + Y++ + + T
Sbjct: 793 FNKL----------------------------QSKGISPNGIT---YNTLIDEYCKEGKT 821
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T L + + Y +A L+++M + PN+I++ LI SGN+E ++
Sbjct: 822 TEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE 881
Query: 574 MREDGMSP 581
M G+ P
Sbjct: 882 MHIRGLLP 889
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKL 318
+ G+C G +++++E LR++ + + ++SL++ A D F+L M
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR--DVMLSA 764
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L+ C +G A ++ + L++KG+ + TY+T++ +
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNK---LQSKGI-SPNGITYNTLIDEYCKEGK 820
Query: 379 WQMALKVKEDMLSAG----------------VTPNTITWSSLINACANAGLVEQAMHLFE 422
A K+K+ M+ G V PN IT+ +LI+ +G +E+ L++
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880
Query: 423 EMLQAGCEPNSQCCN 437
EM G P + N
Sbjct: 881 EMHIRGLLPTNWIGN 895
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 81/435 (18%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ +N + + L+ + + D +VY +++ G D+ +YN+LL A LA +
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA--LAKD 251
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Q ++ ++K K + D +TY+ +++ A+ + +M++ G+T N +
Sbjct: 252 EKACQ-VFEDMK----KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR-------- 451
+++L+ A +V++A+ +F M++ GC PN ++LL V Q R
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 452 ------------------------AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISN 481
A RLF W+ + +++ E G I
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 482 MEH----KDKQSITNTPNFVPNSHYSSFD---------------KRFSFKPTTTTYNILM 522
+E +K +T+T + N+ +S+ K+ P TYNIL+
Sbjct: 427 IEMLSKIHEKGVVTDTMMY--NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 523 KACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + RV + E+ P+ IS+ LI+ G +G+V+ A K M+E
Sbjct: 485 AS----FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++PDVV Y+T ++ +++R++ A+SLFEEM QPN+VTY LL + G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y M + G
Sbjct: 601 A---VDLYSKMKQQG 612
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 160/424 (37%), Gaps = 83/424 (19%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ KK + Y +I G G ++ ++ ++ ++ +TLN+ +N+LM
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V A + ++V+ M + G + +Y++LL G V + K +G
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG 373
Query: 358 VLKLDVFTYSTIVKV------FADAKWWQMALKVKED--------------------MLS 391
+ V T S + V F D W +K + D MLS
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCD--MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 392 ----AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
GV +T+ ++++ +A + LFE+M + G P+ NIL+ +
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A +F +
Sbjct: 492 EVDEAINIFEEL-----------------------------------------------E 504
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP +YN L+ D EM+ GL+P+ ++++ L++ G + VE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + + M G P++V Y + ++ R +A L+ +MK + P+ +TY L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 626 RARS 629
R +S
Sbjct: 625 RLQS 628
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 57/429 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ ++ + +D+ + ++N+ V SLM +L+ L + + +
Sbjct: 233 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 292
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ + +Y++L+ CC GN A E Y E+K KG+ + V++ ++I++ + +
Sbjct: 293 GLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK---TKGI-RSSVYSLNSILEGYLKCQS 348
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCN 437
WQ A + D L +G+ N T+++L++ G + +A +L++E++ G PN N
Sbjct: 349 WQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 407
Query: 438 ILLQACVE-----ACQFDRAF--RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
I+L C + AC+ + F ++ T + G G+ + ++ H+ K +
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA- 466
Query: 491 TNTPNFVPNSHY------------SSFDKR--------FSFKPTTTTYNILMKA------ 524
N +P SF+ R F PT YN ++
Sbjct: 467 ----NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 525 --CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++ YR EM VG++P+ +++T LID N++ AL++L M+ G+ D
Sbjct: 523 INLASNVYR------EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 576
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AY T I + + +K A L E++ + PN Y +++ + +++ V++ +
Sbjct: 577 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG---FKNMNNVEEAID 633
Query: 643 VYQDMWKAG 651
+Y+ M G
Sbjct: 634 LYKKMVNEG 642
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 202/485 (41%), Gaps = 53/485 (10%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFC----------NFVREFGKKRDLVSALRAYDA 246
++ CV + +V A+R + D++ C + ++ + + +L SAL +
Sbjct: 234 VITACVKEGNVAEALRL-----KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+ PN +ID C G+ K+ Y +++++ + ++Y NS++ +
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++ + + G +A++ ++N LL C G A ++ EV AKG+ +V
Sbjct: 349 WQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGI-SPNVV 403
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ I+ A KV ++ML G TPN +T++ L++ G +E A +F M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
A P I+++ +A + LF + + + G +GN
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFD------------------KRFSFKPTTTTY 518
+ SN+ +++ + TP+ V ++ S D KR K Y
Sbjct: 524 NLASNV-YREMCEVGITPSTV--TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 580
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C D L+NE+R GLSPN + +I NVE A+ + K M
Sbjct: 581 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 640
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G+ D+ YT+ I ++S RL A + EM I P+ + L+ G
Sbjct: 641 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 700
Query: 637 VQQCL 641
++ L
Sbjct: 701 ARKIL 705
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 22/356 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ T N F LM+ D++ ++ M+ ++ + I++K C
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + ++++ + ++G + Y+TI+ F +A V +M G+T
Sbjct: 484 KAGRSFEGRDLFNK---FVSQGFVPT-CMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 539
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++SLI+ ++ A+ L +M + G + + + L+ + A L
Sbjct: 540 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 599
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R LS + G + ++N+E +P K
Sbjct: 600 LNELRGAGLSPNRFIYNSMITGFKN-MNNVEEAIDLYKKMVNEGIP----------CDLK 648
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ + L+K+ Y + EM + G+ P+ + T+LI+ G E A +IL+
Sbjct: 649 TYTSLIDGLLKSGRLLY--ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
M M P V+ Y T I + L++AF L +EM + P+ +TY L+ +
Sbjct: 707 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGK 762
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 197 IVQLCVNKPDVNLA---IRYAC---IVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
I+ + + ++NLA R C I P + + + + + F K ++ AL+ + K+
Sbjct: 513 IIDGFIKEGNINLASNVYREMCEVGITP-STVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571
Query: 251 LSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
++ T+ID G C D + + +LR ++ N +++NS++ N ++++
Sbjct: 572 GLKMDIKAYGTLID--GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+++YK M G+ D+ +Y L+ +G + A +I+ E + +KG+L D +
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE---MLSKGILP-DDRAH 685
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ + ++ A K+ EDM + P+ + +++LI G +++A L +EML
Sbjct: 686 TVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 745
Query: 427 AGCEPNSQCCNILLQA 442
G P++ +IL+
Sbjct: 746 RGLVPDNITYDILVNG 761
>gi|449458656|ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 191/467 (40%), Gaps = 79/467 (16%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADI-----LFCNFVREFGKKRDLVSALRAYDASKKHL 251
++ +C + D A + +V A + L+ + GK + + +
Sbjct: 491 LMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAG 550
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKF 307
PN++ +ID C K+ +Y +RS+NV + VFN+L+ A D F
Sbjct: 551 VEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAF 610
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ + + D + L+KAC AG A+E+Y + + KG ++ Y+
Sbjct: 611 DVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMIHDYKIKGTPEV----YT 666
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
V + + W A + +DM GV P+ I S+LI+ +AG ++ A + E
Sbjct: 667 IAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKTL 726
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G + L+ AC A + +A L+ ED
Sbjct: 727 GIRVGIVSYSSLMGACSNAKNWQKALALY-------------EDL--------------- 758
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGL 544
K + T +T N L+ A +D +++ M+ EM+ +GL
Sbjct: 759 -------------------KSMKLRLTVSTVNALITAL-SDGEQLQMAMDILTEMKELGL 798
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN+I+++IL A + ++E AL +L +EDG+ P + Y I +C+R R+ S
Sbjct: 799 SPNNITYSILTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCIIGMCLR--RIADPSS 856
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +P + TL + S++ Q L VY+++ +AG
Sbjct: 857 L--------DRPLMSLDSTLPQVDSKW-----TAQALKVYREIIEAG 890
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 152/344 (44%), Gaps = 47/344 (13%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ A ++ V+ ++ G +K D Y+T++ +
Sbjct: 485 LSTFNMLMSVCASSQDSERAFQV---VRLVQEAG-MKADCKLYTTLISTCGKSGKVDAMF 540
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M++AGV PN T+ +LI+ CA A V +A ++ M +P+ N L+ AC
Sbjct: 541 EVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFNALITAC 600
Query: 444 VEACQFDRAFRLFRSW-----TLSKTQVALGE-----DYDGNTDR---ISNMEHKDKQSI 490
++ DRAF + + + +G G DR + M H
Sbjct: 601 GQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMIHD----- 655
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKALMNEMRTVGLSPN 547
+ K T Y I + CC+ D+ + +M G+ P+
Sbjct: 656 ------------------YKIKGTPEVYTIAVN-CCSQSCDWDFASNIYQDMTRKGVQPD 696
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I + LID G +G ++ A ++L + G+ +V+Y++ + C +K ++A +L+E
Sbjct: 697 EIFLSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYE 756
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++K +++ + T L+ A S ++Q + + +M + G
Sbjct: 757 DLKSMKLRLTVSTVNALITALS---DGEQLQMAMDILTEMKELG 797
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT +T+N+LM C + D R ++ ++ G+ + +T LI CG SG V+ ++
Sbjct: 483 PTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEV 542
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ P+V Y I C R+ ++ +AF ++ M+ ++P+ V + L+ A +
Sbjct: 543 FHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQ 602
Query: 631 YGSLHEVQQCLA 642
G++ LA
Sbjct: 603 SGAVDRAFDVLA 614
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + E A Q++++++E GM D YTT I C +S ++ F
Sbjct: 482 NPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFE 541
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F M + ++PN+ TY L+ +R +V + VY M
Sbjct: 542 VFHRMVNAGVEPNVHTYGALIDGCARAA---QVAKAFGVYGIM 581
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 156/353 (44%), Gaps = 30/353 (8%)
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N ++N L+ + M + G + D+ ++N L+ A C +GN + +E
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC-SGNRL--EEAL 380
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + KG L DV+T++ ++ Q+AL++ E+M S+G TP+ +T+++LI+
Sbjct: 381 DLARQVTLKG-LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKT 464
+ G + +A+ L +EM AGC ++ N ++ + + + A +F L S+
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ DG RI + Q I+ +P TYN ++
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISE-----------------GLQPNNITYNSIL 542
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + ++ M G + +++ LI+ +G + AL++L+ MR GM
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR 602
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
AY I+ R + A +LF EM P+ TY + R R G
Sbjct: 603 ATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG 655
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 164/383 (42%), Gaps = 43/383 (11%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M + G+ D+ ++N L+KA C A A + +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 208
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + + GV D T++T+++ F + + AL+VK ML G +P +T + LIN
Sbjct: 209 EEMSSSGVAP-DETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCK 267
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + + A ++ V G
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM------DVMVQEGH 321
Query: 471 DYDGNTDRI------SNMEHKDKQSITNT-------PNFVP-----------NSHYSSFD 506
D D T I N + ++ + I N P+ N + D
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381
Query: 507 --KRFSFK---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
++ + K P T+NIL+ A C D L EM++ G +P+ +++ LID
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL +LK M G V Y T I + R+++A +F++M I N +
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
T+ TL+ + + + Q ++
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLIS 524
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 168/395 (42%), Gaps = 43/395 (10%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMAS 326
D MK + ++R + + + V +S + A F V + +L G+ AD
Sbjct: 95 DLMK--VLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVV 152
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN LL L + +Y E+ +G+ K DV T++T++K A + A+ +
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGE---RGI-KPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M S+GV P+ T+++L+ G ++ A+ + ML+ GC P N+L+
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING---Y 265
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPN-FVPNSHYSS 504
C+ R ED G + I+N D+ + N N H
Sbjct: 266 CKLGRV-----------------EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 505 FDK------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
K + P TYNI++ C + K ++N+M G P+ ++ LI
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A +E AL + + + G+SPDV + I + + A LFEEMK P
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ VTY TL+ SL ++ + L + ++M AG
Sbjct: 429 DEVTYNTLI---DNLCSLGKLGKALDLLKEMESAG 460
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 158/389 (40%), Gaps = 45/389 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S V + F +LM V +K L V M ++G + N+L+ C
Sbjct: 207 MLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYC 266
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 267 KLGRV---EDALGYIQQEIANG-FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD 322
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M++ GC P+ N L+ A + + A L
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK--- 512
R TL L D T N + N+ D + + +
Sbjct: 383 ARQVTLK----GLSPD-------------------VYTFNILINALCKVGDPQLALRLFE 419
Query: 513 --------PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
P TYN L+ C+ KAL + EM + G + +++ +ID
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A ++ M G+S + + + T I + KR+ A L +M +QPN +TY
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++L + Y ++++ + Q M G
Sbjct: 540 SIL---THYCKQGDIKKAADILQTMTANG 565
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 131/337 (38%), Gaps = 52/337 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E+++S T + +N+L++ + L L+
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 507
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + + M G E
Sbjct: 508 DGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE 567
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R RI M
Sbjct: 568 VDVVTYGTLINGLCKAGRTQVALKLLRGM------------------RIKGMRA------ 603
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
P ++ F T N L EM VG P+ +
Sbjct: 604 ------TPKAYNPVIQSLFRRNNTRDAMN---------------LFREMTEVGEPPDAFT 642
Query: 551 WTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ I+ C G G++ A L M + G P+ ++
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSF 679
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +++ S + +N++++
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A ++ + + ++G
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL---ISQMISEG 530
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + + M + G + +T+ +LIN AG + A
Sbjct: 531 -LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVA 589
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ L M G + N ++Q+ A LFR T +GE D T
Sbjct: 590 LKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT------EVGEPPDAFTY 643
Query: 478 RI 479
+I
Sbjct: 644 KI 645
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 87/413 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRAS-EVLR 317
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+ +G++ D SYNIL++ C G N
Sbjct: 318 EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 377
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 378 KIEAAEIL--IREIREKGIV-LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQF 434
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 435 TYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
R + P TYN
Sbjct: 495 -----------------------------------------------DRMNIDPDDVTYN 507
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 508 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSL 567
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S+
Sbjct: 568 GFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 186/450 (41%), Gaps = 52/450 (11%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + + R + A+ + K+ P C I+ + +
Sbjct: 154 KSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVF 213
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV LK M+ G+ + +YN L++ L
Sbjct: 214 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSL 273
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 274 RGRIEGARMIISEMK---SKG-FQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVP 326
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 327 DSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 386
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSF--- 511
R E ++K + + T N V N + D + +F
Sbjct: 387 R-------------------------EIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421
Query: 512 --------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
KPT TY L+ C +A L ++ G+ P+ + L+D +
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT 481
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN++ A +LK M + PD V Y ++ + ++A L EMK I+P+ ++Y
Sbjct: 482 GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 541
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TL+ S+ G + + V +M G
Sbjct: 542 NTLISGYSKKG---DTKHAFIVRDEMLSLG 568
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ N+ + +N LM + KF E+
Sbjct: 466 PDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAREL 525
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 526 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL----LTYNALLK 581
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ + ++A ++ +M S G+ PN ++ S+I A + +
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 173/373 (46%), Gaps = 28/373 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD ++R ++ + + N Y F L+N K +
Sbjct: 194 SPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD 253
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G+ ++ +YN L+ C G A +++ E++ +GV + +V TY+T++
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRE---RGV-EANVVTYNTLI 309
Query: 371 KVFA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A K+ + M A V+PN IT+++LI + G +++A L +++ G
Sbjct: 310 GGMCREERVWE-AEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGL 368
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKD 486
P+ NIL++ +A + L R +S ++V D R+ ME
Sbjct: 369 SPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV-RLQEMEKAF 427
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ YSS +K F P Y +L+ C + L M + +
Sbjct: 428 QI-------------YSSMEK-FGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHV 473
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ + + +I N AL++L+ M G+ P+V +Y++ I V + + ++A
Sbjct: 474 EPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEV 533
Query: 605 LFEEMKHYQIQPN 617
L ++M Q++P+
Sbjct: 534 LLDKMIELQLKPS 546
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 156/380 (41%), Gaps = 30/380 (7%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-VYKNMQKLGVMADMASYNILLK 332
K+ + ++ + + +FNSL+ F ++ N K V D+ S+ I++K
Sbjct: 111 KALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIK 170
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CC GN + ++ G ++ + L +V Y+T++ + A + M
Sbjct: 171 GCCENGNLDKSFQLLGLLQDMG----LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEM 226
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ N T++ LIN GL + LFE+M G PN N L+ + RA
Sbjct: 227 GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286
Query: 453 FRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQ--SITNTPNFVP-NSHYSS 504
F LF R + V G +R+ E Q +PN + N+
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG 346
Query: 505 F------DKRFSF---------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
F DK S P+ TYNIL++ ++ V L EM G+SP+
Sbjct: 347 FCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPS 406
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ T+LIDA +E A QI M + G+ PDV Y I +K++ LF
Sbjct: 407 KVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFR 466
Query: 608 EMKHYQIQPNLVTYITLLRA 627
M ++P+ V Y T++
Sbjct: 467 SMGEMHVEPSDVIYNTMIHG 486
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 49/282 (17%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E K +K DV+++ ++K + + ++ + G++PN + +++LI+ C G
Sbjct: 153 ELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGD 212
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A F++M + G N +L+ + F LF ++
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN----------- 261
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
P TYN LM C + +
Sbjct: 262 ------------------------------------GLFPNLYTYNCLMNEYCGEGKICR 285
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L +EMR G+ N +++ LI V A +++ M++ +SP+++ Y T I
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
L +A SL +++K + P+LVTY L+ S+ G+
Sbjct: 346 GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A + D KK SPN+ T+I G C G+ K+ ++ + L+S ++ ++ +N L
Sbjct: 321 AEKLVDQMKKAAVSPNLITYNTLIG--GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNIL 378
Query: 298 MN-------------------------------------VNAHDLKFTLEVYKNMQKLGV 320
+ V +++ ++Y +M+K G+
Sbjct: 379 IEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438
Query: 321 MADMASYNILLKACCLAGNTVLAQEIY---GEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ D+ Y +L+ C+ GN + +++ GE+ H+E V+ Y+T++ +
Sbjct: 439 VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM-HVEPSDVI------YNTMIHGYCKED 491
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL++ +M + G+ PN ++SS+I G E+A L ++M++ +P++ N
Sbjct: 492 NSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551
Query: 438 ILLQA 442
++ +A
Sbjct: 552 MISKA 556
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
QA+ LF +Q G + + LLQ ++ + A +S L + +
Sbjct: 20 QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHA----QSLILQILSNKISSPFFTV 75
Query: 476 TDRISNMEHKDKQSITNTPNF--VPNSHYSS-------------FDKRFSFKPT--TTTY 518
+ ++ S+T + + N+H S DK F+P +
Sbjct: 76 PSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLL 135
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+++ C + + NE++ + + S+ I+I C +GN++ + Q+L ++++ G
Sbjct: 136 GSLVRSNC--FEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+SP+VV YTT I C ++ +++A F++M + N T+ L+ + G
Sbjct: 193 LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKG 246
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 22/290 (7%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GVL DV TY+T++ + +A V M AG+ P+ +++++LI+ L +
Sbjct: 43 GVLP-DVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSK 101
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
++ LF+EML+ G P++ NIL+ + + D A R+F+ ++ L ++ T
Sbjct: 102 SLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFK-------EIVLRDEVHPAT 154
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYR 531
I + N + N +R F P TYN L+ C D R
Sbjct: 155 YNIMINGLCKNGYVGNALSLFRNL------QRHGFVPQVLTYNALINGLCKARRLKDARR 208
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V + E G PN +++T ++ C E L+IL MR G + D AY T I
Sbjct: 209 V---LKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIA 265
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++ R+++A + E M ++P+LV+Y TL+ R G L + + L
Sbjct: 266 AMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLL 315
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 154/374 (41%), Gaps = 47/374 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T+ID + ++ + + ++ FN+L++ F+ L++
Sbjct: 46 PDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDL 105
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF--TYSTI 369
+ M K G+ D S+NIL+ G A ++ E+ VL+ +V TY+ +
Sbjct: 106 FDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEI-------VLRDEVHPATYNIM 158
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL + ++ G P +T+++LIN A ++ A + +E + G
Sbjct: 159 INGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGN 218
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG-----------NTDR 478
EPN+ ++ C F+ + LS+ + +LG +DG T R
Sbjct: 219 EPNAVTYTTVMTCCFRCRLFEEGLEI-----LSEMR-SLGFTFDGFAYCTVIAAMIKTGR 272
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--M 536
+ E + +++ +P +YN L+ C AL +
Sbjct: 273 MQEAEEIVEMMVSS-----------------GVRPDLVSYNTLINLYCRQGRLDDALRLL 315
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+E+ GL + + TI++D +GN +GA + L M G ++VA+ + ++
Sbjct: 316 DEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKA 375
Query: 597 KRLKQAFSLFEEMK 610
+ A LFE M+
Sbjct: 376 GHIDHALRLFEVME 389
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A R + + PN T++ C C + + I ++RS T + +
Sbjct: 199 KARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGF 258
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+ +++ + ++ E+ + M GV D+ SYN L+ C G A + E+
Sbjct: 259 AYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEI 318
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
E +G L+ D +T++ IV A + A + M S G N + ++ ++
Sbjct: 319 ---EGEG-LECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGK 374
Query: 411 AGLVEQAMHLFEEM 424
AG ++ A+ LFE M
Sbjct: 375 AGHIDHALRLFEVM 388
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
A+++ +R +G+ P+ +++ LIDA ++ A +L M + G+ PDVV++ T I
Sbjct: 35 AIVDGIR-LGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGA 93
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
VR ++ LF+EM I P+ ++ L+ + G E +
Sbjct: 94 VRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANR 139
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 153/387 (39%), Gaps = 56/387 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V + +N +++V + + M+
Sbjct: 179 TVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 238
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ ACC G L E + L+A+G V TY+ +++VF A
Sbjct: 239 AGVEPDGFTASTVIAACCRDG---LVDEAVAFFEDLKARGHAPC-VVTYNALLQVFGKAG 294
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V +M G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 295 NYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYN 354
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF D++
Sbjct: 355 TVMTAYGNVGKVDEALALF--------------------DQM------------------ 376
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 377 ---------KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 427
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L+ MR G+ Y T I R AF ++ EM
Sbjct: 428 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 487
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
P + TY LL SR G Q ++
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQSIVS 514
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 196/452 (43%), Gaps = 72/452 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + ++ +P + ++DV G G + + A+ +++R+ V + + ++++
Sbjct: 193 ALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVI 252
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + +YN LL+ AGN A + GE +E
Sbjct: 253 AACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGE---MEQN 309
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A + + M S G+ PN T+++++ A N G V++
Sbjct: 310 GC-QPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDE 368
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF++M + G PN N++L + +F + + S T +A
Sbjct: 369 ALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA 428
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T + M + +T N + ++ + +FK
Sbjct: 429 VCGKRGMEDY--VTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGF 486
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++MRT G PN S+++L+ GNV G
Sbjct: 487 TPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAA 546
Query: 570 I------------------------LKIMREDGM------------SPDVVAYTTAIKVC 593
I K R DGM +PD+V + + + +
Sbjct: 547 IENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIY 606
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ +A +F+ +K + P+L+TY +L+
Sbjct: 607 AKNGMYSKATEVFDSIKRSGLSPDLITYNSLM 638
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 43/430 (10%)
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDL 305
ASK L PN + T++ G G ++ A+++ ++ N+ +N ++ +
Sbjct: 342 ASKGLL--PNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKS 399
Query: 306 KFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+FT LE+ M + G + ++N +L C G + + ++ + + GV +L
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMRSCGV-ELSR 455
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + A K+ +M SAG TP T+++L+N + G A + +
Sbjct: 456 DTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSK 515
Query: 424 MLQAGCEPNSQCCNILLQ--------ACVEACQFD--RAFRLFRSWTLSKTQVALGEDYD 473
M G +PN Q ++LLQ A + A + + + +F SW + +T V +
Sbjct: 516 MRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIA----N 571
Query: 474 GNTDRISNME--HKDKQSITNTPNFV----------PNSHYSS----FD--KRFSFKPTT 515
R+ ME ++ ++ P+ V N YS FD KR P
Sbjct: 572 FKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDL 631
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMR-TVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN LM A C++ + + ++N+++ + + P+ +S+ +I+ G V+ A ++L
Sbjct: 632 ITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLS 691
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M DGM+P V Y T + + +A + M + ++P +TY ++ + R
Sbjct: 692 EMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAK 751
Query: 633 SLHEVQQCLA 642
E + L+
Sbjct: 752 RFEEARGFLS 761
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 51/269 (18%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E L G + ++++++A + AG E+A+ LF E+ + G P N++L
Sbjct: 161 LDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVL---- 216
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
D R+ RSW VAL ++ R + +E
Sbjct: 217 -----DVYGRMGRSW---PRIVALLDEM-----RAAGVE--------------------- 242
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T + ++ ACC D A +++ G +P +++ L+ G +G
Sbjct: 243 --------PDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAG 294
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N AL++L M ++G PD V Y R+ ++A + M + PN TY
Sbjct: 295 NYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYN 354
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ A YG++ +V + LA++ M K G
Sbjct: 355 TVMTA---YGNVGKVDEALALFDQMKKTG 380
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L A+ K +P++ I +++ + G Y K+ +++ ++ ++ ++
Sbjct: 573 KCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLI 632
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYG 348
+NSLM++ A + E K + +L + D+ SYN ++ C G AQ +
Sbjct: 633 TYNSLMDMYAK-CSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLS 691
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E + A G+ V TY T+V ++ + + A +V M+ G+ P +T+ ++ +
Sbjct: 692 E---MVADGMAPCAV-TYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESY 747
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
A E+A E+ + + + + L+A +E QF R
Sbjct: 748 CRAKRFEEARGFLSEVSETDLDFDKKA----LEAYIEDAQFGR 786
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 64/393 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K GV D+ +YN L K L G A+++ V+ + +G L D+ TY+T++
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV---VQKMLLQG-LNPDLVTYTTLICGH 386
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ ALK++++ LS G N I ++ L++ G +E+A+ LF+EM EP+
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNT-------DR 478
+IL+ + RA++L+ L ++ V LG +GN D
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506
Query: 479 ISNMEHKDKQSITN---------------------------TPNFVP-NSHYSSFDKRFS 510
+ M+ + + N TP+ V N+ + F +R
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566
Query: 511 FK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
P+ TY LM A C + + ++EM + P H+++T+
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTV 626
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + +LQ+L+ M G+ PD V Y T I+ + K + +A L+ M +
Sbjct: 627 LIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
P VTY L+ A +G L +V + + +D
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 37/356 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D SYNILL C+AG+ E G +E GV + DV TY+T+ K F
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSM---DEALGFTDDMEKHGV-EPDVVTYNTLAKGFL 352
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T+++LI G +E+A+ L +E L G + N
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM---- 482
N+LL + + + A LF + + + G +G R +
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472
Query: 483 -------EHKDKQSIT----NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
H ++++ N +Y R YNI++ Y R
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG----YVR 528
Query: 532 VKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + M+ G++P+ +++ LI+ G++ A ++L+++R G+ P VV
Sbjct: 529 LDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YTT + +++ F EM+ + P VTY L++ R +HE Q L
Sbjct: 589 YTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLL 644
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 28/331 (8%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + S N ++ C G +A+ + L K L D F+Y+ ++ A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFC----LMVKNGLLHDSFSYNILLHGLCVAGSM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL +DM GV P+ +T+++L GL+ A + ++ML G P+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382
Query: 440 LQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + + A +L R TLS K V ++ +E
Sbjct: 383 ICGHCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA----------- 430
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWT 552
+ FD + +P Y+IL+ C + + R L +MR P+H +
Sbjct: 431 -----LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ +GN+ A + DVV Y I VR + +A L+ +M
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
I P++VT+ TL+ R G L E ++ L V
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEV 576
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+I+ +VR G + A++ Y + +P++ T+I+ G C GD M++R +
Sbjct: 520 NIMIDGYVRLDG----IAEAMQLYYKMIERGITPSVVTFNTLIN--GFCRRGDLMEARKM 573
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E +R + + ++ + +LMN +++ M+ V+ +Y +L+K C
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
E ++++ AKG+L D TY+TI++ F K AL++ ML P
Sbjct: 634 QNKM---HESLQLLEYMYAKGLLP-DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689
Query: 397 NTITWSSLINA 407
+T+ LINA
Sbjct: 690 TQVTYKVLINA 700
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YM ++ + D + N + + ++ L++Y M +Y +L
Sbjct: 645 EYMYAKGLLPDSVTYNTIIQCFC-------KGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C+ G+ +++ V +E + + L TY TI+K AL ML
Sbjct: 698 INALCIFGDL---KDVDRMVVSIEDRNI-TLKKVTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ G + +S++IN GL+ +A + F ML G P+ + C +L A
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNA 805
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 55/354 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 243 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 355
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 356 VGDAF--------------------------------------------TYNTLIHGYCQ 371
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 37/373 (9%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 142 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 198 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 257 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 624 LLRARSRYGSLHE 636
+++ R L E
Sbjct: 435 IIQGLCRTDKLKE 447
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 139 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 192 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 248
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 249 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 308 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 360
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P+ T L+ C + +L++ M G PN + + +I+ + ++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M + G+ D V Y T I S R A L +M +I PN++ + L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 626 RARSRYGSLHEVQQCLAVYQDMWK 649
+ G+L E + +Y++M +
Sbjct: 262 DTFVKEGNLLEARN---LYKEMIR 282
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F K+ +L+ A Y + PN++ ++I+ I G ++ +++
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ ++ +N+L+ + ++ ++++ M G++ D +YN L+ C AG
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+AQ+++ + + D+ TY+ ++ + + AL + ED+ + + + I
Sbjct: 375 LNVAQKVFNRM----VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
T++ +I +++A LF + + G +P++
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F F P YN ++ C D + M G+ + +++ LI SG
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + + P+V+ +T I V+ L +A +L++EM + PN+ TY +L+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 627 ARSRYGSLHEVQ 638
+G L + +
Sbjct: 298 GFCIHGCLGDAK 309
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 43/360 (11%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK- 360
A+ L LE++K + G + A+Y T + Q +Y + EAK
Sbjct: 312 ANRLDDALELFKLLSSYGCKPNAATY------------TTIIQGLYDAQRMEEAKAFFDE 359
Query: 361 -LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
LDV +Y+T++K AD+K A ++ E + +AG +PN + ++++I+ AG +E +
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
FE+M + C P +++ +A A ++F + K V Y D
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM-VQKGCVPDTITYTTLIDGF 478
Query: 480 SNMEHKDKQS------ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYY-R 531
S D+ +T P +PT TY ++ C D
Sbjct: 479 SKASKMDEARKLLDVMLTKGP-----------------EPTAVTYGSIVHGFCKLDMINE 521
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K ++ +MR G P +T L+ G E A Q+L M G +PDV+ YT+ I
Sbjct: 522 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 581
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + R+ +A +F+ M P+ +TY T+++ S+ G++ + L + M K+G
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL---MAKSG 638
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 174/427 (40%), Gaps = 61/427 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
I + + F K + A + D P +I+ G C M +++ +
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH--GFCKLDMINEAKEVI 526
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R + +++F SL++ ++ + +V M G D+ Y L+
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + KG D TY TI++ F+ + A ++ E M +GV P+
Sbjct: 587 GRVPEARHVF---DSMIEKGCAP-DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++SL++ V+QA +++ M+ +G +PN+ N+L+ + + DRAF LF+
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
M KD+ VP PT +
Sbjct: 703 -----------------------EMLEKDE---------VP--------------PTLVS 716
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ +A EM G+ P ++T LI + +G + A ++++ M
Sbjct: 717 YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL---LRARSRYG 632
+ G++PDV AY+ I + S + A+ +F+EM PN VTY L RA R
Sbjct: 777 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 836
Query: 633 SLHEVQQ 639
L V+Q
Sbjct: 837 DLEAVKQ 843
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 177/408 (43%), Gaps = 47/408 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E L++ + N+ + ++++ + A ++ L+ +++M + +Y +++ C
Sbjct: 385 LFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLC 444
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A +++ + + KG + D TY+T++ F+ A A K+ + ML+ G
Sbjct: 445 KAQMLPDACKVF---EQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+ S+++ ++ +A + +M + GCEP LL + + + A+++
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 456 FRSWTLS--KTQVALGE---DYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF 509
T V L D +T R+ H I P++ Y + + F
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNF 618
Query: 510 S-------------------FKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGL 544
S P YN LM Y +++ + + M G+
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG----YVKLERVDQAFGVYDRMVASGI 674
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ +L+ G + A + K M E D + P +V+YT I ++ R+ +AF
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S F+EM I P TY +L+ + ++ G + E ++ + +DM K G
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK---LVEDMVKLG 779
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 189/488 (38%), Gaps = 110/488 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
P++ C +++ G+C +AI + ++ S I +N++++ A K E
Sbjct: 18 PDVVNCNIVLN--GLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMD-EA 74
Query: 312 YK---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL---EAKGVLKLDVFT 365
YK +M G D+ ++ L+ C AG +V H+ +A + DVF
Sbjct: 75 YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQP--------QVGHMLLNQALKRFRPDVFL 126
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT--------------------------- 398
Y++++ + A K+ E+ML+AG P+
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 399 --------ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+T+ +LI A +N G +++A L+ EM++ G EP + + L+ A +A + D
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 451 RAFRLFRSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQ--SITNTPNFVPNSHYSSF 505
A ++++ K ++VA DG ++ ++ K + NF Y+
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYC-KLGRVDDGLKLLLQMVECDNFPDIQTYNIL 305
Query: 506 DKRFS-------------------FKPTTTTYNILMKAC--------------------- 525
FS KP TY +++
Sbjct: 306 VAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS 365
Query: 526 -------CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
D R+ L +++T G SPN +++T +ID +G +E L+ + M
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
P YT I +++ L A +FE+M P+ +TY TL+ S+ +
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485
Query: 636 EVQQCLAV 643
E ++ L V
Sbjct: 486 EARKLLDV 493
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 60/359 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+ K M G+M D+ + NI+L C A A E++ E+ + + + +Y+T
Sbjct: 5 LDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPT----IVSYNT 60
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-------LVEQAMHLF 421
++ A A K M+ G P+ I +++LI+ AG L+ QA+ F
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 422 ---------------------------EEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
EEML AGC P++ +L+ + + D A+
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 455 LFRSWTLSKTQVALGEDYDGNT--DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
LF S LG+ T + +SN D+ Y +R ++
Sbjct: 181 LFERMRKSG---CLGDYVTFMTLIEALSNHGKLDEAC----------ELYREMIER-GYE 226
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEM-RTV---GLSPNHISWTILIDACGGSGNVEGAL 568
P + L+ A C +A NE+ +TV ++ + +++ L+D G V+ L
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEA--NEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L M E PD+ Y + R+ RL A LF+ + Y +PN TY T+++
Sbjct: 285 KLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 18/266 (6%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL ++M + G+ P+ + + ++N A +++A+ LF EM GCEP N ++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A++ F S D D I+ P V +
Sbjct: 64 GLASIDKMDEAYKFFNSMI----------DNGCEPDVIAFTTLIHGFCKAGQPQ-VGHML 112
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KRF +P Y ++ C D ++ EM G P+ ++ +LID
Sbjct: 113 LNQALKRF--RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLC 170
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G V+ A ++ + MR+ G D V + T I+ +L +A L+ EM +P L
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLE 230
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQ 645
+L+ A + G + E + +YQ
Sbjct: 231 VQDSLIFALCKAGKVDEANE---IYQ 253
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E AL LK M G+ PDVV + +++++ +A LF EM +P +V+Y T
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ S S+ ++ + + M G
Sbjct: 61 VI---SGLASIDKMDEAYKFFNSMIDNG 85
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 352 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 457
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 458 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 480
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 179/404 (44%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P+++ T+++ G+C GD + ++ + + + ++ ++ ++++ N ++ L
Sbjct: 218 PDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ ++ +YN L++ C G A + ++ +E K + +V T+S +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSAL 331
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L++ +A + + LFR E +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFR-------------------------EMSQRGL 426
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
+ NT TYN L++ D + + +M + G+ P+
Sbjct: 427 VGNT----------------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++IL+D G +E AL + + +++ M PD+ Y I+ ++ +++ + LF
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++PN++ Y T++ R G E A++++M + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEAD---ALFREMKEDG 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 173/388 (44%), Gaps = 57/388 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 298
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 390
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 391 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 430
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ +++P++ TY ++ + G + +
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 185/438 (42%), Gaps = 50/438 (11%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD +K S N+ + + D + G+ ++SR + +I FN L++ A
Sbjct: 44 SYDYREKL--SRNVLLDLKLDDAVDLFGEMVQSRPLP----------SIVEFNKLLSAIA 91
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + MQ L + D+ SYNIL+ C LA + G++ L +
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--- 148
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ T S+++ + K A+ + + M PNT+T+++LI+ +A+ L
Sbjct: 149 -DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE---------D 471
+ M+ GC+P+ ++ + D A L + K + + +
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVP-NS---------HYSSFDKRFS------FKPTT 515
Y D ++ D + I PN V NS +S + S P
Sbjct: 268 YKNVNDALNLFTEMDNKGIR--PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T++ L+ A + V+A L +EM + P+ +++ LI+ ++ A + ++
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M P+VV Y T IK ++KR+++ LF EM + N VTY TL++ + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 634 LHEVQQCLAVYQDMWKAG 651
Q+ +++ M G
Sbjct: 446 CDMAQK---IFKKMVSDG 460
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 149/365 (40%), Gaps = 63/365 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLS 545
P TYNI+++ C +V+ L + G+
Sbjct: 498 ------------------------PDIYTYNIMIEGMCK-AGKVEDGWDLFCSLSLKGVK 532
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 606 FEEMK 610
+EM+
Sbjct: 593 IKEMR 597
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 175/396 (44%), Gaps = 49/396 (12%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G+ + + +L N LN + FN ++ ++ L+V + M+ G++
Sbjct: 365 GLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILP 424
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-----------GVLK-------LDVF 364
D+ SY+IL+ A C G+ + ++ E++H + K G+ K +D+F
Sbjct: 425 DVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIF 484
Query: 365 -------------TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
Y T++ F A+K+ E+M+ + P + SLI
Sbjct: 485 HSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKL 544
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
GL +QA+ +F ML+ G P++ CN +L A F A L + +
Sbjct: 545 GLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLN-PHS 603
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDY 529
Y+ ++ E ++++ P + KR + P+ Y+ L+ +++
Sbjct: 604 YNAIIYKLCK-EGYPERALELLPRML---------KR-NVLPSVVNYSTLISGFAKQSNF 652
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
R L M VG++ N ++TIL+ S + A I K M+E G+ D ++YTT
Sbjct: 653 KRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I ++ +K+A++LFEEM PN++TY ++
Sbjct: 713 IVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 184/466 (39%), Gaps = 38/466 (8%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
V R+ ++F + F L +AL + +K P++ C ++ R
Sbjct: 243 VERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVR 302
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD------LKFTLEVYKNMQKLGVMADMASYNIL 330
++E+L+ + + NIY + +MN D ++ + + + G + +Y+
Sbjct: 303 RVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTY 362
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C GN A + + + L+ +++ ++ F AL+V E+M
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQP----LNSHSFNDVIYGFCKRGEVFEALQVLEEMK 418
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S+G+ P+ ++S LINA G V + + L EEM + +P+ L+ +
Sbjct: 419 SSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQ 478
Query: 451 RAFRLFRSWTLSKTQ------------VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
A +F S S + + D D + M + + +
Sbjct: 479 NAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLI 538
Query: 499 NSHY--SSFDK---------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
+Y FD+ R P T N ++ C Y +AL + + + G +
Sbjct: 539 RGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFN 598
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N S+ +I G E AL++L M + + P VV Y+T I + K+A +L
Sbjct: 599 LNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNL 658
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F M I N+ TY L+ S + H++ + ++++M + G
Sbjct: 659 FTRMVKVGITFNIATYTILM---SIFSHSHKMHEAYGIFKEMKERG 701
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 180/430 (41%), Gaps = 35/430 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDL 282
F + + F K+ ++ AL+ + K P++Y +I+ CG GD MK + E++
Sbjct: 394 FNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGK-GDVMKCLDLMEEM 452
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ +I + SL++ + L+ ++++ ++ D Y L+ C+ G+
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A ++ E+ E L F+ ++++ + + AL+V ML G+ P+TI
Sbjct: 513 DSAIKLLEEMICNE----LVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIA 568
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN-ILLQACVEACQFDRAFRLFRSW 459
+ +++ AG ++A+ L E+ + G N N I+ + C E +RA L
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYP-ERALELLPRM 627
Query: 460 --------TLSKTQVALGEDYDGNTDRISNMEHK--------DKQSITNTPNFVPNSH-- 501
++ + + G N R N+ + + + T + +SH
Sbjct: 628 LKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKM 687
Query: 502 ---YSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
Y F K +Y L+ C + KA L EM G SPN I++T +
Sbjct: 688 HEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCI 747
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID S ++ A + M D + PDVV YT I + QA L++ MK +
Sbjct: 748 IDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGV 807
Query: 615 QPNLVTYITL 624
P+ +T+ L
Sbjct: 808 LPDDITHNVL 817
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 34/295 (11%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+H+E GV+ + ++ VFA + AL V + G+ P+ T + L+
Sbjct: 241 QHVERSGVV------FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVE 294
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR--------LFRSWTLS 462
A VE +FEE+ G PN I++ D R ++RS
Sbjct: 295 ANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSG--E 352
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT-TYNIL 521
K V Y ++ N+E + N HY++ +P + ++N +
Sbjct: 353 KPTVVTYSTYIHGLCKVGNVE--------AALMLIRNLHYTN-------QPLNSHSFNDV 397
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + ++ EM++ G+ P+ S++ILI+A G G+V L +++ M +
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
P +V+YT+ I + L+ A +F + + + Y TL+ G +
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 163/408 (39%), Gaps = 48/408 (11%)
Query: 264 DVCGICG----DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQK 317
D+ G C D + + + D Q+V + VF+ L++V A + L+ L+V+ N +
Sbjct: 217 DIVGFCNEAKYDTFELFSAFLD-SPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKH 275
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF---- 373
+G+ D+ + N LLK A + ++ E+K +++TY+ ++ +
Sbjct: 276 VGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSP----NIYTYTIMMNFYCSDV 331
Query: 374 -ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
DA Q A+ + + + +G P +T+S+ I+ G VE A+ L + N
Sbjct: 332 GCDAGMRQAAVILGK-IYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLN 390
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD-----------GNT----D 477
S N ++ C+ F + K+ L + Y G+ D
Sbjct: 391 SHSFNDVIYG---FCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLD 447
Query: 478 RISNMEHKD-KQSITNTPNFV-----PNSHYSSFDKRFSF-----KPTTTTYNILMKACC 526
+ MEH K SI + + + N ++ D S K +T Y L+ C
Sbjct: 448 LMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFC 507
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
D L+ EM L P S LI G + AL++ M DG+ PD +
Sbjct: 508 MQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTI 567
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A + R+ K+A +L E+ + + N +Y ++ + G
Sbjct: 568 ACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEG 615
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 152/355 (42%), Gaps = 34/355 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ M K G++ D +Y IL+ C A T LA ++ H + KG K DVFTY
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL-----HEKMKGNCKGDVFTYGM 1090
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ AL + +M+ AG+ P+ + +SSL++ G +++A+ F+EM G
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150
Query: 429 CEPNSQCCNILLQACVEACQF-----------DRAFRLFRSWTLSKTQVAL-GEDYDGNT 476
+ N L+ A + DR F ++T + L E G
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP-DAFTFTILIDGLCKEGKVGEA 1209
Query: 477 DRISN-MEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+I M HK K+ T N + N + S R K +YNIL+
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILIN 1268
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D +A EMR GL P+ +++ LI A SG V A ++ M+ G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ Y + ++ L++A LF+ +K + +PN+ + LL R G L E
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 174/386 (45%), Gaps = 25/386 (6%)
Query: 263 IDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKL 318
I + G+C AI +E ++ N +++ + +++ D T L+++ M
Sbjct: 1056 ILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGA 1114
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ D+ Y+ L+ C G A E + K +E +G+ DV+TY++++ + A
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFF---KEMEGRGI-SADVYTYNSLIHGLSRAGL 1170
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W+ M+ G +P+ T++ LI+ G V +A + E M G EP+ N
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ Q + A +LF S L+ + L + N + N KD Q I F
Sbjct: 1231 LMNGLCLVGQLEDATKLFES--LADRGIKLNV-FSYNI--LINGYCKD-QKIDEAFRFFE 1284
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILI 555
KP+T TYN L+ A C RV+ L EM+T G ++ +L+
Sbjct: 1285 EMRPKGL------KPSTVTYNTLIGALCQSG-RVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D +G++E A+ + + +++ P++ ++ + R+ +L++A+ F+E+ ++
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P+ + Y L+ G L E + L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLL 1423
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 174/418 (41%), Gaps = 49/418 (11%)
Query: 262 IIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
IID +C D M + A+ + ++ + ++ V++SLM+ LK LE +K M+
Sbjct: 1091 IID--ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ AD+ +YN L+ AG L +E+ + + +G D FT++ ++
Sbjct: 1149 RGISADVYTYNSLIHGLSRAG---LWKEVTWFLNLMVDRG-FSPDAFTFTILIDGLCKEG 1204
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A ++ E M G P+ +T+++L+N G +E A LFE + G + N N
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264
Query: 438 ILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LGEDYDGNTDRISNMEHKDKQSI 490
IL+ + + D AFR F R L + V +G R + + Q+
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 491 TN----------TPNFVPNSHYS-SFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA 534
N H + D K+ KP ++IL+ C +A
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+E+ GL P+ I++ ILI+ G + A+++L M E G PD + + I+
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + +A L EEM++ P+ LL CLA + W A
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL--------------CLASFDPQWHA 1488
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 148/350 (42%), Gaps = 61/350 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + +ID G+C G +++ I E +R + +I +N+LMN L+
Sbjct: 1187 SPDAFTFTILID--GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++++ G+ ++ SYNIL+ C A + E++ KG LK TY+T
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR---PKG-LKPSTVTYNT 1300
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K+ +M + G T+ L++ G +E+AM LF+ + +
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN + +ILL A + + A++ F D IS
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQF--------------------DEIS-------- 1392
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +P T YNIL+ C +A L+ +M G P
Sbjct: 1393 -------------------KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ I++ ++I + A+Q+L+ MR SPD T++ +C+ S
Sbjct: 1434 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD--EAVTSMLLCLAS 1481
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 17/268 (6%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+K+ + L + P T T++ L+ + A G ++ ++ G +P+ NIL+
Sbjct: 930 AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C C RA + D T + + + N +P++
Sbjct: 990 CC---CSL-RAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWME---------NGIPDA- 1035
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISWTILIDAC 558
FD+ + TY IL+ C A+ ++E + ++ ++IDA
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDAL 1095
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G AL + M G+ PDVV Y++ + R RLK+A F+EM+ I ++
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQD 646
TY +L+ SR G EV L + D
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 50/256 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G P+ +T ++L+ + A+ LF+EM + G +++ IL+ +A +
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L E GN
Sbjct: 1068 GLAIKLH-------------EKMKGNC--------------------------------- 1081
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
K TY +++ A C D +AL +EM G+ P+ + ++ L+D G ++ A
Sbjct: 1082 --KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L+ K M G+S DV Y + I R+ K+ M P+ T+ L+
Sbjct: 1140 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199
Query: 628 RSRYGSLHEVQQCLAV 643
+ G + E QQ L +
Sbjct: 1200 LCKEGKVGEAQQILEL 1215
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 55/353 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + K++Q +GV D+ + N+L+ C + LA G++
Sbjct: 74 FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+FT+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 134 KLG----FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKN 189
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V+ A+ LF +M G P+ L+ + ++ A L R K
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK-------- 241
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A +
Sbjct: 242 ---------------------------------------IKPDVITFNALIDAFVKEGKL 262
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
K L NEM + ++PN ++T LI+ G ++ A Q+ +M G PDVVAYT+
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
I + K+++ A +F EM + N +TY TL++ G + Q+
Sbjct: 323 INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFG 375
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 170/395 (43%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + +AL ++ + + P++ + ++++ G+C G + + +
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADLLL 234
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + K E+Y M ++ + ++ +Y L+ C+
Sbjct: 235 RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME 294
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K + A+K+ +M G+T N
Sbjct: 295 GRLDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + ++A +F
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF- 409
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
E K+ I P P T
Sbjct: 410 -------------------------EDMQKREIDGVP------------------PNIRT 426
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +M+ + I++TI+I +G V+ AL + +
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R + +A LF +MK
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 147/335 (43%), Gaps = 21/335 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ M+ G+ D+ Y L+ C +G A + + K +K DV T++
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM----MKRKIKPDVITFNA 251
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F A ++ +M+ + PN T++SLIN G +++A +F M G
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L+ + + + A ++F + +S+ + GNT I+
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIF--YEMSQKGLT------GNT--ITYTTLIQGF 361
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-----NEMRTVG 543
+ PN V + R P TYN+L+ C + KALM + G
Sbjct: 362 GLVGKPN-VAQEVFGHMVSR-GVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDG 419
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ PN ++ +L+ +G +E AL + M++ M ++ YT I+ ++ ++K A
Sbjct: 420 VPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDAL 479
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+LF + ++PN+VTY T++ R G + E
Sbjct: 480 NLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAH 514
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 30/379 (7%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L + KLG D+ ++ L+ CL
Sbjct: 95 KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCL- 153
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + M + G+ P+
Sbjct: 154 GNRI--EEAMSMVNQMVEMGI-KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD 210
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M++ +P+ N L+ A V+ + A L+
Sbjct: 211 VVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYN 270
Query: 458 SWTLSKTQVALGEDYDGNTDRISN--MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
Q+++ + T I+ ME + ++ + + + F P
Sbjct: 271 EM----IQMSIAPNIFTYTSLINGLCMEGRLDEA---------RQMFYLMETKGCF-PDV 316
Query: 516 TTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ C C + EM GL+ N I++T LI G G A ++
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ---PNLVTYITLLRARSR 630
M G+ P++ Y + + ++ +A +FE+M+ +I PN+ TY LL
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436
Query: 631 YGSLHEVQQCLAVYQDMWK 649
G L ++ L V+ DM K
Sbjct: 437 NGKL---EKALMVFGDMQK 452
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G+ G ++ ++
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG-NTITYTTLIQGFGLVGKPNVAQEVFG 375
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ K L ++++MQK GV ++ +YN+LL C
Sbjct: 376 HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLC 435
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++G+++ + + + K A + AL + + S GV
Sbjct: 436 YNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK----AGKVKDALNLFCSLPSKGVK 491
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL+ +A LF +M + G
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++ +G+S + + +L++ S A L + + G PD+ +T+ I
Sbjct: 93 LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+++A S+ +M I+P++V Y T++ + + G V L+++ M G
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG---HVDNALSLFNQMENYG 206
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 64/393 (16%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M+K GV D+ +YN L K L G A+++ V+ + +G L D+ TY+T++
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV---VQKMLLQG-LNPDLVTYTTLICGH 386
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ ALK++++ LS G N I ++ L++ G +E+A+ LF+EM EP+
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTL--------SKTQVALGEDYDGNT-------DR 478
+IL+ + RA++L+ L ++ V LG +GN D
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506
Query: 479 ISNMEHKDKQSITN---------------------------TPNFVP-NSHYSSFDKRFS 510
+ M+ + + N TP+ V N+ + F +R
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566
Query: 511 FK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
P+ TY LM A C + + ++EM + P H+++T+
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTV 626
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI + +LQ+L+ M G+ PD V Y T I+ + K + +A L+ M +
Sbjct: 627 LIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
P VTY L+ A +G L +V + + +D
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 37/356 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K G++ D SYNILL C+AG+ E G +E GV + DV TY+T+ K F
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSM---DEALGFTDDMEKHGV-EPDVVTYNTLAKGFL 352
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A KV + ML G+ P+ +T+++LI G +E+A+ L +E L G + N
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNM---- 482
N+LL + + + A LF + + + G +G R +
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472
Query: 483 -------EHKDKQSIT----NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
H ++++ N +Y R YNI++ Y R
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG----YVR 528
Query: 532 VKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + M+ G++P+ +++ LI+ G++ A ++L+++R G+ P VV
Sbjct: 529 LDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVT 588
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
YTT + +++ F EM+ + P VTY L++ R +HE Q L
Sbjct: 589 YTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLL 644
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 28/331 (8%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V + S N ++ C G +A+ + L K L D F+Y+ ++ A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSXFC----LMVKNGLLHDSFSYNILLHGLCVAGSM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL +DM GV P+ +T+++L GL+ A + ++ML G P+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382
Query: 440 LQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + + A +L R TLS K V ++ +E
Sbjct: 383 ICGHCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEA----------- 430
Query: 497 VPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWT 552
+ FD + +P Y+IL+ C + + R L +MR P+H +
Sbjct: 431 -----LTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ +GN+ A + DVV Y I VR + +A L+ +M
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
I P++VT+ TL+ R G L E ++ L V
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEV 576
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+I+ +VR G + A++ Y + +P++ T+I+ G C GD M++R +
Sbjct: 520 NIMIDGYVRLDG----IAEAMQLYYKMIERGITPSVVTFNTLIN--GFCRRGDLMEARKM 573
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
E +R + + ++ + +LMN +++ M+ V+ +Y +L+K C
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
E ++++ AKG+L D TY+TI++ F K AL++ ML P
Sbjct: 634 QNKM---HESLQLLEYMYAKGLLP-DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689
Query: 397 NTITWSSLINA 407
+T+ LINA
Sbjct: 690 TQVTYKVLINA 700
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+YM ++ + D + N + + ++ L++Y M +Y +L
Sbjct: 645 EYMYAKGLLPDSVTYNTIIQCFC-------KGKEITKALQLYNMMLLHNCDPTQVTYKVL 697
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C+ G+ +++ V +E + + L TY TI+K AL ML
Sbjct: 698 INALCIFGDL---KDVDRMVVSIEDRNI-TLKKXTYMTIIKAHCAKGQVSKALGYFNQML 753
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ G + +S++IN GL+ +A + F ML G P+ + C +L A
Sbjct: 754 AKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNA 805
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 177/406 (43%), Gaps = 36/406 (8%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAH 303
+ H PN+ ++ID G+C + RA ++E ++S + ++ +N+L++
Sbjct: 2 RDHGCEPNVVTYNSLID--GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 59
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
L+ + +++ M D+ S+NIL+ C AG A E + ++ + +V
Sbjct: 60 KLERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDRCSP-----NV 113
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS ++ A A+++ E M + G +P+ IT++ L++ V A + E
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDR 478
ML AGC PN N LL A + A L R T + V G DG R
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALM 536
+ KD ++ DK P YN+L+ C AL+
Sbjct: 234 V-----KDACAMLA----------DMIDK--GGTPDLMIYNMLINGLCKADQVDESIALL 276
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ G+ P+ ++++ +I S ++ A ++L ++ G PDV+ Y+T I ++
Sbjct: 277 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++ +AF L+E M ++VTY TL+ + G + E LA
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G PN +T++SLI+ ++A LFE M C P+ N LL +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+RA LF+ ++ + + ++ + K I F + D R
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNI-----LVTGLCRAGK--IETALEF-----FRKMDDR 108
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
S P TY++L+ C +A L+ M+ G SP+ I++TIL+D V
Sbjct: 109 CS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 166
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + G P++V Y + + R++R+ A +L +M PN+VTY TL+
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 226
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G V+ A+ DM G
Sbjct: 227 GLCKVG---RVKDACAMLADMIDKG 248
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 139/368 (37%), Gaps = 73/368 (19%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-----------GVLKL-- 361
M+ G ++ +YN L+ C AQE++ +K +E G+ +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 362 -----------------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
DV +++ +V A + AL+ M +PN IT+S L
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A V QA+ L E M GC P+ IL+ + + A+ + R
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR------- 172
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS-------------F 511
E D + N + H +R S
Sbjct: 173 ------------------EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 214
Query: 512 KPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TY L+ C RVK A++ +M G +P+ + + +LI+ + V+ ++
Sbjct: 215 TPNVVTYGTLIDGLCK-VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+L+ G+ PDVV Y++ I RS RL +A L +K P+++ Y TL+
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Query: 629 SRYGSLHE 636
+ G + E
Sbjct: 334 CKAGKVDE 341
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + T N+ + +L++ +K + +M G D+ YN+L+
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 263
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A E ++ + G+ K DV TYS+++ + A ++ + S G
Sbjct: 264 CKADQV---DESIALLRRAVSGGI-KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGC 319
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF- 453
P+ I +S+LI+ AG V++A L+E M GC+ + + L+ +A + D A
Sbjct: 320 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHL 379
Query: 454 ---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
R+ R T T Y+ + ++ H D ++I +R +
Sbjct: 380 LLARMVRMGTPPSTMT-----YNSLIKGLCDLNHLD-EAIELVEEM----------ERSN 423
Query: 511 FKPTTTTYNILMKACCT---------DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P+ TYNIL+ C DY++ EM G+ P+HI+++IL++
Sbjct: 424 CAPSAVTYNILIHGMCRMERVDSAALDYFQ------EMIDNGVIPDHITYSILLEG 473
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 162/408 (39%), Gaps = 62/408 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ---NVTLNIYVFNS 296
A+ ++ K SP++ ++D G+C + K A +E LR N+ +NS
Sbjct: 132 AVELLESMKARGCSPDVITYTILVD--GLCKES-KVAAAWEVLREMLDAGCVPNLVTYNS 188
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ A + L + ++M G ++ +Y L+ C G A + ++ ++
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--ID 246
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D+ Y+ ++ A ++ + +S G+ P+ +T+SS+I + +
Sbjct: 247 KGGTP--DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A L + GC P+ + L+ +A + D AF L+ +V G+ D
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY--------EVMTGDGCDA 356
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+ TY+ L+ C +A
Sbjct: 357 D---------------------------------------VVTYSTLIDGLCKAGRVDEA 377
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ M +G P+ +++ LI +++ A+++++ M +P V Y I
Sbjct: 378 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 437
Query: 593 CVRSKRLKQ-AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
R +R+ A F+EM + P+ +TY LL + LHE++
Sbjct: 438 MCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH 485
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 25/340 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ ++ G + SY ++++ + N A+ ++ ++ G +KL +++
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEK-KSGGAVKLGDRFFNS 170
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA- 427
+++ + A +Q ++KV + M GV+P+ +T++SL++ G A LF+EML
Sbjct: 171 LIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 230
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNM 482
G P++ NIL++ D F F+ + K V DG ++
Sbjct: 231 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ K + +PN PN TY L++ C D +L+ EM
Sbjct: 291 HNVVKGMVKKSPNLSPN---------------VVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I++ LI + ++ +IL+ M DG PD T IK +L
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++AFS+FE+M ++QP+ TY L+R+ + G ++
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 174/464 (37%), Gaps = 90/464 (19%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
V D F + +R +G +++ + K+ SP++ +++ + G ++
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAK 220
Query: 277 AIYED-LRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKNMQKLGVMADMASYNILL 331
++++ L + VT + Y FN L+ +N+ D F +K M + D+ +YN L+
Sbjct: 221 QLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF--FKEMSRFKCDPDVVTYNTLV 278
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C AG +A + VK + K L +V TY+T+++ + + AL + +M+
Sbjct: 279 DGLCRAGKVKIAHNV---VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 391 SAGVTPNTITWSSLINACANA------------------------------------GLV 414
S G+ PN IT+++LI A G +
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+A +FE+M + +P+S ++L+++ + F RA F L++ ++ L +
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE--LAEKEILLHD---- 449
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
KP YN + + C++ KA
Sbjct: 450 ----------------------------------VGCKPLVAAYNPMFEYLCSNGKTKKA 475
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ G T+++ C G E +L +M PD Y I
Sbjct: 476 ERVFRQLMKRGTQDPPSYKTLILGHC-REGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ A E+M P + ++L A G HE
Sbjct: 535 LLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHE 578
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 50/245 (20%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SLI + AGL ++++ +F+ M + G P+ N LL ++ + A +LF
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD--- 224
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
E D +T P T T+NI
Sbjct: 225 ----------------------EMLDTYGVT---------------------PDTYTFNI 241
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM--RE 576
L++ C + + EM P+ +++ L+D +G V+ A ++K M +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+SP+VV YTT I+ + + +A SL EM ++PN +TY TL++ L +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 637 VQQCL 641
+++ L
Sbjct: 362 IKEIL 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 507 KRFSFKPTTTTYN----ILMKACCTDYYRVKALMNEM-RTVGLSPNHISWTILIDACGGS 561
K P+ T+N I++K T K L +EM T G++P+ ++ ILI +
Sbjct: 192 KEIGVSPSVVTFNSLLSIVLKRGRTSM--AKQLFDEMLDTYGVTPDTYTFNILIRGFCMN 249
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLV 619
V+ K M PDVV Y T + R+ ++K A ++ + M K + PN+V
Sbjct: 250 SMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVV 309
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+R Y ++ + L++ +M G
Sbjct: 310 TYTTLIRG---YCMKQDMAEALSLLAEMVSRG 338
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 188/432 (43%), Gaps = 31/432 (7%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
++ F ++ + A+ +DA KK P+ + ++D G+C GD + + ++
Sbjct: 288 IQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVD--GLCKQGDVLTGYDLLVEMARN 345
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ + ++SL++ A ++ E+++ +++ G D Y+I+L CC N +
Sbjct: 346 GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVV 405
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ ++ H D + Y++++ F + AL V E ML +GV+PN +T +
Sbjct: 406 CDLWNDMVHHN----FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ ++++A ++ Q G PN +++ + + D + +F
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFAD----- 516
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNIL 521
+ Y +T S + +++ +P + + F K KP TY L
Sbjct: 517 ---MIKRGYVPDTVVYSIIIDSFVKALK-----LPEA-FRLFHKMLDEGTKPNVFTYTSL 567
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D V L M GL+P+ I +T LI N++ AL+I + M + G+
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
S D YT I + + A L EEM + + P++VTY L+ + G +
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANM 687
Query: 640 CLAVYQDMWKAG 651
Y M +AG
Sbjct: 688 ---TYNSMLQAG 696
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 160/392 (40%), Gaps = 33/392 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL----EVYKNMQKLGVMADMASYNIL 330
+R++++D++S + N+Y ++ LM+ H + L E+ M+ GV + A+Y
Sbjct: 193 ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L T + ++ L +G + + ++ +++ F Q A++V + M
Sbjct: 253 LYG---LSRTRQVASAWNFLQMLCQRGN-PCNTYCFNAVIQGFCREGQVQEAIEVFDAMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T ++S L++ G V L EM + G P + LL A + +
Sbjct: 309 KGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVE 368
Query: 451 RAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD 506
AF LFR + +G ++ D + NFVP+++ Y+S
Sbjct: 369 LAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLI 428
Query: 507 KRF-------------------SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
F P T IL+ + +A + +++R G+
Sbjct: 429 YAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIV 488
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN + ++I+ + I M + G PD V Y+ I V++ +L +AF L
Sbjct: 489 PNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRL 548
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
F +M +PN+ TY +L+ L EV
Sbjct: 549 FHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV 580
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 175/454 (38%), Gaps = 64/454 (14%)
Query: 205 PDVNLAIRYACIVPRADILFCNFVREFGKKRDL-VSALRAYDASKKHLSSPNMYICRTII 263
P + LA+R + I F VR +G + + + AL + + +I R+I+
Sbjct: 55 PLITLAVRTSSWDKARKISFGECVRLYGLSQTIGLFALLMRSFLPQRIREIRCFI-RSIV 113
Query: 264 DVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVM 321
D CG G + A + L L +Y + V + L Y +K+GV
Sbjct: 114 DYCGSSGRELFELAPMLVSSLGGSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVE 173
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--ADAKWW 379
+ N LLK + A+ ++ ++K +V++YS ++ + D +
Sbjct: 174 LQLC--NFLLKCLVERNQIIYARSLFDDMKSSGPSP----NVYSYSVLMSAYTHGDRLYL 227
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A ++ +M GV PN T+ + + + V A + + + Q G N+ C N +
Sbjct: 228 AEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAV 287
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+Q Q A +F +
Sbjct: 288 IQGFCREGQVQEAIEVFDAM---------------------------------------- 307
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
K+ P T +Y+IL+ C D L+ EM G++P +S++ L+
Sbjct: 308 -------KKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHG 360
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G VE A ++ + + E G D + Y+ + C + ++ L+ +M H+ P+
Sbjct: 361 LCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPD 420
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y +L+ A R+ +L + L V++ M +G
Sbjct: 421 AYNYTSLIYAFCRHRNLTDA---LGVFELMLDSG 451
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + + N++ + SL+N HD L + ++K+M G+ D Y L+ C
Sbjct: 548 LFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYC 607
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N A EI+ + L L D F Y+ ++ F+ A + E+M + G+T
Sbjct: 608 KRSNMKAALEIFRGMGKLG----LSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLT 663
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
P+ +T+++LI G +A + MLQAG P+++ IL
Sbjct: 664 PSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 45/324 (13%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G + +L ++ G+AP + S LL C+ +G+VE+ L LEE
Sbjct: 328 KQGDVLTGYDLLVEMARNGIAPTLV---SYSSLLHGLCR----AGKVELAFELFRRLEE- 379
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE----------FGKK 234
+ + + + +N +L I C + D++ NFV + F +
Sbjct: 380 ----QGFKHDHIVYSIILNGCCQHLNIEVVCDLWN-DMVHHNFVPDAYNYTSLIYAFCRH 434
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE------DLRSQNVT 288
R+L AL ++ SPN+ C ++D G K R I E +R +
Sbjct: 435 RNLTDALGVFELMLDSGVSPNVVTCTILVDGFG------KERMIDEAFLFLHKVRQFGIV 488
Query: 289 LNI----YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ + N L VN D ++ +M K G + D Y+I++ + A A
Sbjct: 489 PNLCMYRVIINGLCKVNKSD--HVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAF 546
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ H K +VFTY++++ + + + M+ G+TP+ I ++SL
Sbjct: 547 RLF----HKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602
Query: 405 INACANAGLVEQAMHLFEEMLQAG 428
I ++ A+ +F M + G
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLG 626
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 105 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 164
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G A E+ V+ + KG L DVFTY+ +
Sbjct: 165 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL---VEEMGGKG-LAPDVFTYNIL 220
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T++SLI A + G V++ LF+E ++ G
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 313
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 314 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 353
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 354 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 413
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 414 EMVENGITPDDSTYISLIEG 433
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 42/370 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ +M +L + ++NI+L+ C AG A E+ ++ A TY+T++
Sbjct: 28 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA--------VTYNTVI 79
Query: 371 KVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG- 428
F Q AL + +M G+ PN T+ ++I+ G V++A+ +F+EML G
Sbjct: 80 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY---------DGNT--- 476
+P + N L+ + + D A L+R + + Y DG
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 477 -DRISNMEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+ + M K T N + N H + + +R + T TY L+
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIY 257
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A L +E G+ P+ + + LI++ SGN++ A +I+ M + ++P
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V Y T ++ R+ +A L +EM IQP+LVTY TL+ S G +V+ L
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG---DVKDAL 374
Query: 642 AVYQDMWKAG 651
+ +M G
Sbjct: 375 RIRNEMMNKG 384
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 25/340 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L ++ ++ G + SY ++++ + N A+ ++ ++ G +KL +++
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEK-KSGGAVKLGDRFFNS 170
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA- 427
+++ + A +Q ++KV + M GV+P+ +T++SL++ G A LF+EML
Sbjct: 171 LIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 230
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNM 482
G P++ NIL++ D F F+ + K V DG ++
Sbjct: 231 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
+ K + +PN PN TY L++ C D +L+ EM
Sbjct: 291 HNVVKGMVKKSPNLSPN---------------VVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRL 599
+ GL PN I++ LI + ++ +IL+ M DG PD T IK +L
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++AFS+FE+M ++QP+ TY L+R+ + G ++
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 174/464 (37%), Gaps = 90/464 (19%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
V D F + +R +G +++ + K+ SP++ +++ + G ++
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAK 220
Query: 277 AIYED-LRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKNMQKLGVMADMASYNILL 331
++++ L + VT + Y FN L+ +N+ D F +K M + D+ +YN L+
Sbjct: 221 QLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF--FKEMSRFKCDPDVVTYNTLV 278
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C AG +A + VK + K L +V TY+T+++ + + AL + +M+
Sbjct: 279 DGLCRAGKVKIAHNV---VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 335
Query: 391 SAGVTPNTITWSSLINACANA------------------------------------GLV 414
S G+ PN IT+++LI A G +
Sbjct: 336 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E+A +FE+M + +P+S ++L+++ + F RA F L++ ++ L +
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE--LAEKEILLHD---- 449
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
KP YN + + C++ KA
Sbjct: 450 ----------------------------------VGCKPLVAAYNPMFEYLCSNGKTKKA 475
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ G T+++ C G E +L +M PD Y I
Sbjct: 476 ERVFRQLMKRGTQDPPSYKTLILGHC-REGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ A E+M P + ++L A G HE
Sbjct: 535 LLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHE 578
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 50/245 (20%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SLI + AGL ++++ +F+ M + G P+ N LL ++ + A +LF
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD--- 224
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
E D +T P T T+NI
Sbjct: 225 ----------------------EMLDTYGVT---------------------PDTYTFNI 241
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM--RE 576
L++ C + + EM P+ +++ L+D +G V+ A ++K M +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+SP+VV YTT I+ + + +A SL EM ++PN +TY TL++ L +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 637 VQQCL 641
+++ L
Sbjct: 362 IKEIL 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 507 KRFSFKPTTTTYN----ILMKACCTDYYRVKALMNEM-RTVGLSPNHISWTILIDACGGS 561
K P+ T+N I++K T K L +EM T G++P+ ++ ILI +
Sbjct: 192 KEIGVSPSVVTFNSLLSIVLKRGRTSM--AKQLFDEMLDTYGVTPDTYTFNILIRGFCMN 249
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLV 619
V+ K M PDVV Y T + R+ ++K A ++ + M K + PN+V
Sbjct: 250 SMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVV 309
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+R Y ++ + L++ +M G
Sbjct: 310 TYTTLIRG---YCMKQDMAEALSLLAEMVSRG 338
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 186/404 (46%), Gaps = 47/404 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ I+D G+C G +++ ++E++++Q + +I +NSL++ A + +
Sbjct: 213 PNVITYNIIVD--GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ DM ++N+L+ C G + A+++ G + +E+ G++ D+ TY+++
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM--IES-GIVP-DLVTYNSL 326
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ F A ++ M S G P+ I+++ LIN + VE+AM L+ EML G
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
PN + LL+ A + D A +LF ++ +++ G DG
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG------------ 434
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC------TDYYRVKALMNEMR 540
N F ++ K +FK N L+ C T + + L NE
Sbjct: 435 --LCKNDCLFEAMKLFTEL-KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE-- 489
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN +++TI+I G V+ A +++ M +G +PD++ Y T ++ S +L+
Sbjct: 490 --GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLE 547
Query: 601 QAFSLFEEMKHYQIQPNLVT---YITLLRARSRYGSLHEVQQCL 641
+ L M + P+ +T + +L +Y Q+CL
Sbjct: 548 EVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKY------QECL 585
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 176/431 (40%), Gaps = 68/431 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A + + + + NI +N+L+ H + ++ MQKLG D+ +Y L+K
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGL 184
Query: 335 CLAGNTVLA----QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C GN +A QE+ ++ E K +V TY+ IV A ++ E+M
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEIN--CKPNVITYNIIVDGLCKVGREDEAKQLFEEMK 242
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G+ P+ I+++SLI+ AG E++ L +EML G +P+ N+L+ + +
Sbjct: 243 TQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVI 302
Query: 451 RAFRLFRSWTLSK------TQVALGEDY----DGNTDR--ISNMEHKDKQSITNTPNFVP 498
A +L S T +L E + D N+ R +M K + + N +
Sbjct: 303 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362
Query: 499 NSHYSSFDKRFSFK-----------PTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
N + + + K P TY+ L+K K L + M+ G++
Sbjct: 363 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422
Query: 546 PNHISWTI-----------------------------------LIDACGGSGNVEGALQI 570
N ++ I LID +G +E A ++
Sbjct: 423 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 482
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ + +G P+VV YT I R ++ +A L ++M+ P+++TY TL+R
Sbjct: 483 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 542
Query: 631 YGSLHEVQQCL 641
L EV Q L
Sbjct: 543 SNKLEEVVQLL 553
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 155/372 (41%), Gaps = 62/372 (16%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L S TLNI + N L NVN L+ + + + G ++ +YN L+K C+
Sbjct: 100 LSSDRCTLNI-LLNCLCNVNR--LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS------AGVT 395
A ++ ++ L DV TY T++K +ALK+ ++ML+
Sbjct: 157 EATRLFLRMQKLGCTP----DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN IT++ +++ G ++A LFEEM G P+ N L+ A +++ + RL
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
D D+ +P
Sbjct: 273 L----------------DEMLDQ-------------------------------GLQPDM 285
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N+L+ C + K L+ M G+ P+ +++ LI+ G++ A ++
Sbjct: 286 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G PDV++Y I ++ ++++A L+ EM +PN++TY +LL+ G
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405
Query: 634 LHEVQQCLAVYQ 645
+ + ++ +V +
Sbjct: 406 VDDAKKLFSVMK 417
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 64/368 (17%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
++ + L + + F+L Y M+ G+ +D + NILL C N +E +
Sbjct: 74 HLLSGLAKIKHYSQVFSL--YNQMRLSGLSSDRCTLNILLNCLC---NVNRLREGFAAFA 128
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G ++ TY+T++K A ++ M G TP+ +T+ +LI
Sbjct: 129 GILRRGY-SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 412 GLVEQAMHLFEEML------QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G + A+ L +EML + C+PN NI++ + + D A +LF KTQ
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM---KTQ 244
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA- 524
+ P+ +YN L+
Sbjct: 245 GMI--------------------------------------------PSIISYNSLIHGF 260
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + K L++EM GL P+ +++ +LID G V A ++L +M E G+ PD+
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y + I+ L A LF M +P++++Y L+ Y +V++ + +
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING---YSKTLKVEEAMKL 377
Query: 644 YQDMWKAG 651
Y +M G
Sbjct: 378 YNEMLLVG 385
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%)
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C GN ++ HL + + +++ ++ A K + + M +G+
Sbjct: 43 CKTGNVTATHALH--FFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T + L+N N + + F +L+ G PN N L++ + A R
Sbjct: 101 SSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160
Query: 455 LF-RSWTLSKTQ--VALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
LF R L T V G G T I N+ K Q + N S Y
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNI-NIALKLHQEMLNDI-----SRY-----EI 209
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ KP TYNI++ C K L EM+T G+ P+ IS+ LI +G E +
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L M + G+ PD+V + I + ++ +A L M I P+LVTY +L+
Sbjct: 270 KRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Query: 628 RSRYGSLHEVQQ 639
G L+ ++
Sbjct: 330 FCMVGDLNSARE 341
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/239 (16%), Positives = 105/239 (43%), Gaps = 6/239 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ + K + A++ Y+ PN+ +++ + G ++ ++ +++
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420
Query: 287 VTLNIYVFNSLMN-VNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ N Y + ++ + +D F ++++ ++ ++ + N L+ C AG A
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 480
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E++ + L +G + +V TY+ ++ F A + + M + G TP+ IT+++L
Sbjct: 481 ELF---EKLSNEG-HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+ + +E+ + L M Q P++ C+I++ + ++ L + + K
Sbjct: 537 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 159/354 (44%), Gaps = 23/354 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + + NV + FN+L+N A +K + M++ G +SYN L+K
Sbjct: 47 LLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYG 106
Query: 336 LAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L G A ++ E+ AK V K + T++ ++K +A K + A V M +AGV
Sbjct: 107 LDGQPEEAMKLLQEM----AKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGV 162
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +++++L A G A ++ EM PN + I++ + A Q D + R
Sbjct: 163 GPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLR 222
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ-SITNTPNFVPNSHYSSFDKRFSFKP 513
L + DG + I+ H K S + P+ V + F KP
Sbjct: 223 LIERMKM-----------DGISPTIAVFNHLVKGYSESMKPHKV--DKVFKLMENFGVKP 269
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+ ++M A C+ KA++ M+ L P+ ++++IL+ G E L
Sbjct: 270 DVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFL 329
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
IM ++ + P+V+ YTT I ++ A +F+EM+ + PN+ T+ TL+
Sbjct: 330 NIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLI 383
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M V P+ I +++L+N AG +++A L EM + GC + N L++
Sbjct: 49 QQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLD 108
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGN-TDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q + A +L + + +D + DR NM K + + N + S
Sbjct: 109 GQPEEAMKLLQE---------MAKDVNSKPNDRTFNMLIK---AWAHDKNPEKARNVISM 156
Query: 506 DKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ P +YN L + A + + ++ EM+ V L PN ++ I+I+ +G
Sbjct: 157 MRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQ 216
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ +L++++ M+ DG+SP + + +K S + + +F+ M+++ ++P++ T+
Sbjct: 217 IDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGL 276
Query: 624 LLRARSRYGSLHEVQQCL 641
++ A G + E + L
Sbjct: 277 IMNAWCSTGLIDEAKAVL 294
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN +I+ G +S + E ++ ++ I VFN L+ + +K +V
Sbjct: 199 PNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKV 258
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M+ GV D+ ++ +++ A C G A+ + +K + L+ DV YS +VK
Sbjct: 259 FKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYD----LQPDVMAYSILVK 314
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + M+ + PN IT++++I+ + ++ AM +F+EM P
Sbjct: 315 GYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFP 374
Query: 432 NSQCCNILLQACVEACQFDRA 452
N Q L+ EA RA
Sbjct: 375 NMQTFRTLIWGFKEARWPRRA 395
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV-EGALQILKIMREDGMSPDVVAY 586
D+ +V++ + +R G P ++T+L+ + G + EG L +L+ M ED + PD + +
Sbjct: 5 DHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPL-LLQQMEEDNVIPDAIFF 63
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + + ++K+A +L EMK +Y TL++ YG + ++ + + Q+
Sbjct: 64 NTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKG---YGLDGQPEEAMKLLQE 120
Query: 647 MWK 649
M K
Sbjct: 121 MAK 123
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 172/428 (40%), Gaps = 58/428 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG---YCSLRRL 652
Query: 638 QQCLAVYQ 645
+ +++
Sbjct: 653 DEAERIFE 660
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 145/346 (41%), Gaps = 55/346 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F +L+N ++ +++K M++ G+ D+ +Y+ L+ AG + +++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ H KGV KLDV +S+ + V+ + A V + ML G++PN +T++ LI
Sbjct: 345 SQALH---KGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A ++ ++L+ G EP+ + L+ + F L+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI------- 453
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ + P Y +L+
Sbjct: 454 ----------------------------------------KMGYPPDVVIYGVLVDGLSK 473
Query: 528 DYYRVKALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ A+ ++ +G S N + + LID + AL++ ++M G+ PDV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+TT ++V + RL++A LF M ++P+ + Y TL+ A ++
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 52/309 (16%)
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++ +L G PN +T+ +LIN G +++A LF+ M Q G EP+ + L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ +A +LF S L K G D S ++ K T + V
Sbjct: 328 IDGYFKAGMLGMGHKLF-SQALHK-----GVKLDVVVFS-STIDVYVKSGDLATASVVYK 380
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
P TY IL+K C D Y + ++ G+ P+ ++++ LID
Sbjct: 381 RMLCQ-----GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTT-------------AIKVCV---------- 594
GN+ + + M + G PDVV Y A++ V
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 595 ------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R R +A +F M Y I+P++ T+ T++R G L E L
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA---LF 552
Query: 643 VYQDMWKAG 651
++ M+K G
Sbjct: 553 LFFRMFKMG 561
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G L VY+ M G
Sbjct: 367 VKSGDLATAS---VVYKRMLCQG 386
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 168/360 (46%), Gaps = 32/360 (8%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T ++V G G ++ + D++ Q + + F ++N+ A+ +++++M+K
Sbjct: 167 TYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKA 226
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
++ +Y L+ A GN V A+EI+ E L++ G + DV+TY+ +++ ++ +
Sbjct: 227 LCPPNLYTYTALMNAHAREGNCVRAEEIFAE---LQSVGFIP-DVYTYNALLEAYSRGEH 282
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A +V + M+ AGV P+ ++++ LI+A AGL A +++ M +AG +P + +
Sbjct: 283 PTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHML 342
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDYDGNTDRISNMEHKDKQSITN 492
LL + +A + A RL R S + +L Y GN+ RI ME + +++
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAY-GNSGRIDEMESLLESMVSS 401
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
KP +T N L+ A Y KA + N + + GL+P+ +S
Sbjct: 402 VA-----------------KPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMS 444
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
WT L+ A + I + M + G PD + C +++K+ + E +
Sbjct: 445 WTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSCRSPEQVKEVTDMIERHR 504
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 115/228 (50%), Gaps = 12/228 (5%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K DL ++R K L PN+Y +++ G+ +++ I+ +L+S ++Y
Sbjct: 215 KADDLFRSMR------KALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVY 268
Query: 293 VFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+ + T EV++ M + GV D SYNIL+ A AG T AQ +Y +
Sbjct: 269 TYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSM 328
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K +K ++ ++ +A A A ++ ++ ++GV P+T ++SL++A N
Sbjct: 329 KEAGFKPTMK----SHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGN 384
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+G +++ L E M+ + +P+ N L+ A + ++A +F S
Sbjct: 385 SGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNS 432
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 54/334 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVF----TYSTI 369
M+ + S+N+LL A A++++ E+K + G ++ +F TY+T
Sbjct: 109 MKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTY 168
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++V + A DM G+ P T++ +IN A ++A LF M +A C
Sbjct: 169 LEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALC 228
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ A RA +F + QS
Sbjct: 229 PPNLYTYTALMNAHAREGNCVRAEEIF----------------------------AELQS 260
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV--KALMNEMRTVGLSPN 547
+ F P TYN L++A + K + M G+ P+
Sbjct: 261 V-------------------GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPD 301
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+ ILIDA G +G A + M+E G P + ++ + ++ ++ +A L
Sbjct: 302 QVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVR 361
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E+++ ++P+ + +LL A G + E++ L
Sbjct: 362 EIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLL 395
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 131/335 (39%), Gaps = 50/335 (14%)
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW---WQMALKVKEDMLSAGV-TP 396
V+AQ+ + +V + L + T+ I++ A+ + W+ + + E +L + P
Sbjct: 24 VIAQKSHQDV--WDVLDALPRGIGTWEAIMENVAELRRLRNWRSVILILEWILQGTMFKP 81
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++ LI+A + +A F M C P N+LL A Q ++A +LF
Sbjct: 82 DVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLF 141
Query: 457 RSWTLSKTQVALGE--------DYD------GNTDRISNMEHK----DKQSITNTPNFVP 498
S E Y+ G + R+S E KQ I
Sbjct: 142 HEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGIL------- 194
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P T+ I++ YY KA L MR PN ++T L++
Sbjct: 195 --------------PAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMN 240
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
A GN A +I ++ G PDV Y ++ R + A +F+ M ++P
Sbjct: 241 AHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRP 300
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ V+Y L+ A R G + Q AVY M +AG
Sbjct: 301 DQVSYNILIDAFGRAGLTADAQ---AVYDSMKEAG 332
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 163/378 (43%), Gaps = 60/378 (15%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMA---DMASYNILLKACC 335
++++ N+ +N++++ LK T E + ++ +G+ ++ ++N+++ C
Sbjct: 6 FKEMERNGCLPNVVTYNTMID-GYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G E+ E+ KG + D TY+T+V + + AL + +M+ G++
Sbjct: 65 RDGRLKETSEVLVEMSR---KGYVP-DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T++SLIN+ AG + +AM F++M G PN + ++ + D A+R+
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T R F P+
Sbjct: 181 LNEMT-----------------------------------------------RSGFIPSI 193
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C L+ +M G+ P+ +S++ +I + ++ A Q+
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVE 253
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M + PD V Y++ I+ +RL +A +F+EM ++ P+ TY TL+ A + G
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313
Query: 634 LHEVQQCLAVYQDMWKAG 651
L+ + L ++ +M + G
Sbjct: 314 LN---KALHLHDEMIQKG 328
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 46/403 (11%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS---QNVTLNIYVFNS 296
LR + +++ PN+ T+ID G C ++ + LRS + + N+ FN
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMID--GYC-KLKRTDEAFGFLRSMGLKGLEPNLITFNM 58
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++N D LK T EV M + G + D +YN L+ C GN A ++ E+
Sbjct: 59 IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM---- 114
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ L +V TY++++ A A++ + M G+ PN T++++IN A GL+
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A + EM ++G P+ N L+ + + A L +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQ----------------- 217
Query: 475 NTDRISNMEHKDKQSI-TNTPNFVPNSHYSSFDKRFSFK---------PTTTTYNILMKA 524
D + D S T F N D+ F K P TY+ L++
Sbjct: 218 --DMVGKGVLPDVVSYSTIISGFARN---QELDRAFQMKVEMIGKSVLPDAVTYSSLIQG 272
Query: 525 CCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + EM T+ L P+ ++T LI+A G++ AL + M + G PD
Sbjct: 273 LCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
V Y I + R K+A L ++ + P+ VTY TL+
Sbjct: 333 AVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI 375
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 173/457 (37%), Gaps = 109/457 (23%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ + V + K+ + AL + ++ SPN+ ++I+ G+ ++ ++
Sbjct: 88 EVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFD 147
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + N + +++N A L V M + G + + +YN L+ C+ G
Sbjct: 148 QMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLG 207
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+E G ++ + KGVL DV +YSTI+ FA + A ++K +M+ V P+
Sbjct: 208 RM---EEAIGLLQDMVGKGVLP-DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDA 263
Query: 399 ITWSSLI-----------------------------------NACANAGLVEQAMHLFEE 423
+T+SSLI NA G + +A+HL +E
Sbjct: 264 VTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDE 323
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+Q G P++ N+L+ + + A RL YD D I
Sbjct: 324 MIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF-----------YD---DSI---- 365
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
P+ TYN L++ CC ++
Sbjct: 366 -----------------------------PSAVTYNTLIENCCNIEFK------------ 384
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
S L+ G ++ A Q+ + M P+ Y I R + +A+
Sbjct: 385 ------SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA---RSRYGSLHEV 637
L++EM H P+ VT + L++A G L+EV
Sbjct: 439 KLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEV 475
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+ F+EM + GC PN N ++ + + D AF RS L + L
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLI-----TF 56
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ I N +D + + V S R + P TYN L+ C + +++
Sbjct: 57 NMIINGLCRDGRLKETSEVLVEMS-------RKGYVPDEVTYNTLVNGYCKEGNFHQALV 109
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM GLSPN +++T LI++ +GN+ A++ M G+ P+ YTT I
Sbjct: 110 LHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFA 169
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L +A+ + EM P++VTY L+ G + E + + QDM G
Sbjct: 170 QQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEA---IGLLQDMVGKG 223
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 174/395 (44%), Gaps = 65/395 (16%)
Query: 274 KSRAIYEDLRSQNVTL-----NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++R ++ L + V L N+Y+ + ++ L L+V+ +LGV + SYN
Sbjct: 57 EARKFFDKLLNYGVALSAGSCNLYL--TCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
IL+ + G +E + + +E KG + DV +Y+TI+ + Q +++ ++
Sbjct: 115 ILMNSLFRLGKI---REAHHLLMRMEFKGCIP-DVVSYTTIIDGYCHVGELQKVVQLVKE 170
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ PN T+SS+I +G V + + EM++ G P+ L+ +
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSF-- 505
A++LF S ME ++ VP+S +S+
Sbjct: 231 TQAAYKLF-----------------------SEMEARE---------IVPDSIAFSALIC 258
Query: 506 -----------DKRFS------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
DK F+ F+P TY L+ C KA L N+M +GL+P
Sbjct: 259 GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP 318
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T L D SG ++ A ++L M G+ ++ Y T + ++ + QA L
Sbjct: 319 NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EEMK + P+ +TY TL+ A + G + + ++ L
Sbjct: 379 EEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELL 413
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 176/394 (44%), Gaps = 34/394 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
P++ TIID G C G+ K + ++++ + + N+Y ++S++ + K
Sbjct: 143 PDVVSYTTIID--GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGE 200
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V + M K GV D Y L+ C GNT A +++ E +EA+ ++ D +S +
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE---MEAREIVP-DSIAFSAL 256
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A K+ +M+ G P+ +T+++LI+ G +++A L +M+Q G
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L ++ + D A L Q+ + + I N
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI-----STYNTIVN-------G 364
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR----VKA--LMNEMRTVG 543
+ N + K P T TY LM A YY+ VKA L+ EM G
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA----YYKTGEMVKARELLREMLDRG 420
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQA 602
L P +++ +L++ SG +E ++LK M E G+ P+ Y + +K C+R+ ++ +
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN-NMRIS 479
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ M + P+ TY L++ + ++ E
Sbjct: 480 TEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 69/358 (19%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+CG+ G +++ ++ ++ + + + +L++ ++K ++ M ++G+
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++ +Y L C +G A E+ E+ + L+L++ TY+TIV A
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEM----CRKGLQLNISTYNTIVNGLCKAGNIL 372
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+K+ E+M AG+ P+TIT+++L++A G + +A L EML G +P N+L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + + RL + W L K
Sbjct: 433 NGLCMSGKLEDGERLLK-WMLEK------------------------------------- 454
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACC--------TDYYRVKALMNEMRTVGLSPNHISWT 552
P TYN +MK C T+ YR M G+ P+ ++
Sbjct: 455 ---------GIMPNAATYNSIMKQYCIRNNMRISTEIYR------GMCAQGVVPDSNTYN 499
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
ILI + N++ A + K M E + +Y IK + K+L +A LFEEM+
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 65/327 (19%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN+ + D G+C G+ + + ++ + + LNI +N+++N
Sbjct: 317 TPNVVTYTALAD--GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVN----------- 363
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
C AGN + A ++ E+K + L D TY+T++
Sbjct: 364 ----------------------GLCKAGNILQAVKLMEEMK----EAGLHPDTITYTTLM 397
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ +ML G+ P +T++ L+N +G +E L + ML+ G
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 431 PNSQCCN-ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN+ N I+ Q C+ R+ S + + A G D NT I H ++
Sbjct: 458 PNAATYNSIMKQYCIR-----NNMRI--STEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM------NEMRTVG 543
+ H +KRF+ T ++YN L+K +++ K L+ EMR G
Sbjct: 511 MKEAWFL----HKEMVEKRFNL--TASSYNALIKG----FFKRKKLLEARQLFEEMRREG 560
Query: 544 LSPNHISWTILIDACGGSGNVEGALQI 570
L + + + +D GN+E L++
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLEL 587
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +++ A++ + K+ P+ T++D G+ +K+R + ++ + + +
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426
Query: 293 VFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
FN LMN + L+ + K M + G+M + A+YN ++K C+ N ++ EIY
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY--- 483
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + A+GV+ D TY+ ++K A+ + A + ++M+ ++++LI
Sbjct: 484 RGMCAQGVVP-DSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFK 542
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNIL-------------LQAC---VEACQFDRA 452
+ +A LFEEM + G +++ N+ L+ C +E C D+A
Sbjct: 543 RKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDKA 600
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V + +E +G+ N S+ IL+++ G + A +L M G PDVV+YTT I
Sbjct: 94 VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++ L +EM+ ++PNL TY +++ + G + E ++ L ++M K G
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL---REMMKRG 210
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 182/428 (42%), Gaps = 42/428 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N +I ++++ G ++ A+++D ++L+ + +L++ A D+ +
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + ++ D YN+ + C+ G A+ E++++ LK D TY+T++
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG----LKPDQSTYNTMIVS 598
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
ALK+ +M + + PN IT+++L+ G VE+A +L EM+ AG P+
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED------------YDGNTDRIS 480
S +LQAC ++ + D + W ++ L D Y G T + +
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDI-HEWMMN---AGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 481 NMEHK------DKQSITNTPNFVPNSHYSSFDKRFS---------FKPTTTTYNILMKA- 524
+ + +IT + + S D F+ P T+N L+
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++ EM GL PN++++ IL G N A+++ M G P V
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y I ++ + QA LF++M+ + P TY L+ SR + EV++CL
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL-- 892
Query: 644 YQDMWKAG 651
+DM + G
Sbjct: 893 -KDMKEKG 899
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 24/304 (7%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ A+G L +DV Y+T+V F A A V + M AGV PN T++ I
Sbjct: 195 MTAQG-LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-D 471
VE+A L+E M++ G + + L+ +F A+ LFR + K A
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE--MDKVGAAPNHVT 311
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCT 527
Y D ++ + K+ ++ V TY LM K T
Sbjct: 312 YCTLIDSLAK-AGRGKELLSLLGEMVSRGVVMDL----------VTYTALMDWLGKQGKT 360
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D VK + + LSPN +++T+LIDA + NV+ A Q+L M E +SP+VV ++
Sbjct: 361 D--EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V+ L +A MK I PN+VTY TL+ ++ L VY DM
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF---QGQDAALEVYHDM 475
Query: 648 WKAG 651
G
Sbjct: 476 LCEG 479
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 190/502 (37%), Gaps = 114/502 (22%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-----VNAHDLK 306
++PN T+ID G + ++ ++ S+ V +++ + +LM+ ++K
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364
Query: 307 FTLE--VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-------------- 350
TL + N+ GV +Y +L+ A C A N A+++ E+
Sbjct: 365 DTLRFALSDNLSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 351 ------------KHLEAKGVLK-----LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
K E K ++K +V TY T++ F + AL+V DML G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N SL+N G +E+AM LF++ +G + L+ +A AF
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539
Query: 454 RLFRSWTLSKTQVA--------------LGEDYDGNT--DRISNMEHKDKQSITNTPNFV 497
+ F + + + LG+ + + + NM K QS NT +
Sbjct: 540 K-FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT---M 595
Query: 498 PNSHYSSFD-----------KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
SH + K S KP TYN L+ + K L+NEM + G
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 545 SPNHISWTILIDACGGS-----------------------------------GNVEGALQ 569
SP+ ++ ++ AC S G A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L+ M G++PD + + I +S L AF+ + +M H I PN+ T+ TLL
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G + E L +M K+G
Sbjct: 776 SVGRIGEAGTVLI---EMEKSG 794
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 157/359 (43%), Gaps = 22/359 (6%)
Query: 296 SLMNVNAH-DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
SL+++ D L V M G+ D+ YN L+ C AG A+ G + ++
Sbjct: 175 SLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR---GVLDMMK 231
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
GV +V TY+ + + K + A + E M+ GV + +T S+L+ G
Sbjct: 232 EAGV-DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+A LF EM + G PN L+ + +A + L +S+ V Y
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM-VSRGVVMDLVTYTA 349
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
D + D+ + +T F + + S P TY +L+ A C +
Sbjct: 350 LMDWLGKQGKTDE--VKDTLRFALSDNLS---------PNGVTYTVLIDALCKAHNVDEA 398
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ EM +SPN ++++ +I+ G ++ A + ++M+E G++P+VV Y T I
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + A ++ +M ++ N +L+ + G ++++ +A+++D +G
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG---KIEEAMALFKDASGSG 514
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 133/357 (37%), Gaps = 63/357 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+K + AL+ K PN+ T++ G K++ + ++ S + +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ + L L++++ M G+ AD+ YN LL+ C G T A + +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV---L 717
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G+ D T++ ++ + A ML ++PN T+++L+ +
Sbjct: 718 EEMLGSGIAP-DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A + EM ++G EPN+ +IL + A RL+
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------------- 822
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
M K F P +TYN L+ +D+
Sbjct: 823 ---------CEMVGK------------------------GFVPKVSTYNALI----SDFT 845
Query: 531 R------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ K L +M+ G+ P ++ IL+ N + LK M+E G SP
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 38/176 (21%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW-TILIDAC---------- 558
S +PTT YNIL+ A +D+ A++ EM G+ + ++ T+L C
Sbjct: 98 SSRPTTVAYNILL-AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156
Query: 559 -----------------------GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
G G+ AL + M G+ DVV Y T + R
Sbjct: 157 LADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ A + + MK + PN+ TY + Y V++ +Y+ M + G
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFI---VYYCRTKGVEEAFDLYEGMVRNG 269
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y + QN++ NI FN+L+ + + V M+K G+ + +Y+IL
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N V A +Y E + KG + V TY+ ++ F A A ++ +DM GV
Sbjct: 810 GKQSNKVEAMRLYCE---MVGKGFVP-KVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + T+ L++ + + ++M + G P+ + + +A + +A R
Sbjct: 866 HPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQR 925
Query: 455 LFRS 458
L ++
Sbjct: 926 LLKN 929
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G +PN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN D+ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + ++Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETNYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +K +PN+VTY T+++ Y ++V++ + VY+ M +G
Sbjct: 408 KRIKVDGFEPNIVTYGTMIKG---YAKANDVEKMMEVYEKMRLSG 449
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 173/409 (42%), Gaps = 40/409 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY +++ F + +GK + A R K SSPN+ +++ G G
Sbjct: 129 LRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
Y++++ AGN A++++ + KGV + V TY++++ + ++ K+
Sbjct: 249 MYHMMIYMYKKAGNYDKARKVFS---SMVGKGVPQSTV-TYNSLMSFETN---YKEVSKI 301
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M +G+ P+ ++++ LI A A E+A+ +FEEML AG P + NILL A
Sbjct: 302 YDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSS 504
+ ++A +F+S DRI D S T + +V S
Sbjct: 362 SGMVEQAKTVFKSM---------------RRDRI----FPDLWSYTTMLSAYVNASDMEG 402
Query: 505 FDKRF------SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+K F F+P TY ++K A D ++ + +MR G+ N T ++D
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
A G + AL K M G+ PD A + + L +A L
Sbjct: 463 ASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAKEL 511
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 162/397 (40%), Gaps = 64/397 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLG 319
+I G G++ + + L + N+ + +LM K +++ MQ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ E E K LK D Y ++ ++ A +
Sbjct: 205 PEPSAVTYQIILKTFVEGDKFKEAEEVF-ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A KV M+ GV +T+T++SL++ N ++ ++++M ++G +P+ +L
Sbjct: 264 DKARKVFSSMVGKGVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGIQPDVVSYALL 320
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++A A + + A +F E D
Sbjct: 321 IKAYGRARREEEALSVFE------------EMLDAGV----------------------- 345
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + MR + P+ S+T ++ A
Sbjct: 346 ------------RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + K ++ DG P++V Y T IK ++ +++ ++E+M+ I+ N
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 618 LVTYITLLRARSR---YGSLHEVQQCLAVYQDMWKAG 651
T++ A R +GS L Y++M G
Sbjct: 454 QTILTTIMDASGRCKDFGS------ALGWYKEMESCG 484
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LI A G GN GA ++L ++ + G SP+V++YT ++ R + A ++F
Sbjct: 138 SEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ +P+ VTY +L+ E ++ D
Sbjct: 198 RRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLD 237
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 259 CRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN---VNAH-DLKFTLEVYKN 314
C ++ VC GD ++R +++ + V N + +L+N V H ++ F L +
Sbjct: 41 CTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFAL--FAE 98
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ GV ++ +YN L+ C G A+ ++ E + KGV+ +V +Y+ ++
Sbjct: 99 MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDE---MPVKGVVH-NVVSYNILIAGLC 154
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A+++ E M G+ P+ +T++ LI+ AG + A+H F +M AG P+
Sbjct: 155 RHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVV 214
Query: 435 CCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ RA R F + L+ T+V Y + D+ +
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVT----YTILIAAFAKENEMDRAFMM 270
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
S +K + +Y +L+ A C + + L M G+ PN +
Sbjct: 271 ----------LSEMEKA-GLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSV 319
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ++I G G+ AL+++ MR++G+ P+V +Y I++ + ++A +L ++M
Sbjct: 320 LYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDM 379
Query: 610 KHYQIQPNLVTYITLLRARSR-YGS 633
+H +Q + LL A++R +GS
Sbjct: 380 EHAGLQTSETICRILLDAKARLHGS 404
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 147/358 (41%), Gaps = 32/358 (8%)
Query: 302 AHDLKFTLEVYKNMQKLGVMA-DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A +++ L V K G A D+A+ L+ CC +G+ A+ ++ + L GV
Sbjct: 15 AAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRL---GVAP 71
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+V TY+ ++ + +M + +M GV PN T++ LI G + A L
Sbjct: 72 NEV-TYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLL 130
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGN 475
F+EM G N NIL+ + A +LF + + ++ D G
Sbjct: 131 FDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGK 190
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVK 533
+++N H Q K P+ TYN L+ C D R
Sbjct: 191 AGKMANALHFFNQM-----------------KAAGLPPSVVTYNELICGFCRVRDIARAV 233
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+M+ GL+P +++TILI A ++ A +L M + G+ DV +Y +
Sbjct: 234 RAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHAL 293
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A LF+ M ++PN V Y ++ R GS + + L + +M K G
Sbjct: 294 CMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSY---KALRLIMEMRKNG 348
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 164/398 (41%), Gaps = 72/398 (18%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADI----------LFCNFVREFGKKRDLVSALRAYDA 246
+V +C DV A R ++PR + + FVR R++ AL +
Sbjct: 44 LVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVR---GHREMGFAL--FAE 98
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHD- 304
++ PN+Y +I G++ +R +++++ + V N+ +N L+ + H
Sbjct: 99 MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK +++++ M++ G+ + ++N+L+ AG A + ++K A G L V
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMK---AAG-LPPSVV 214
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F + A++ DM G+ P +T++ LI A A +++A + EM
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEM 274
Query: 425 LQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+AG E + Q +LL A C+E + A +LF+S L
Sbjct: 275 EKAGLEVDVQSYGVLLHALCMEG-KMMHARKLFQSMDLK--------------------- 312
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRT 541
KP + Y++++ + Y+ L+ EMR
Sbjct: 313 --------------------------GVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRK 346
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
GL PN S+ + I G + A ++ M G+
Sbjct: 347 NGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGL 384
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
A+R I P + + F + +GK + +AL ++ K P++ +I CG C
Sbjct: 168 AMRREGIRP-SIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELI--CGFC 224
Query: 270 GDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMA 325
+RA+ + D++ + + + L+ A +++ + M+K G+ D+
Sbjct: 225 RVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQ 284
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SY +LL A C+ G + A++++ + ++ KGV K + Y ++ + AL++
Sbjct: 285 SYGVLLHALCMEGKMMHARKLF---QSMDLKGV-KPNSVLYDMMIYGYGREGSSYKALRL 340
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+M G+ PN ++ I N G ++A L ++M AG + + C ILL A
Sbjct: 341 IMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 172/385 (44%), Gaps = 24/385 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMA 325
G + + A++ + V I +N +++V A K +E+ +M++ GV D
Sbjct: 167 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRY 226
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A +++ E+K A G + D T+++++ V+ A+ A++V
Sbjct: 227 TYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSLLDVYGKARRHDEAIEV 282
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M G P+ +T++SLI++ GL+EQA+ L +EM G +P+ L+
Sbjct: 283 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR 342
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + D A + + + L Y+ ++ + K + + F
Sbjct: 343 AGKIDAAIVEYDEMVRNGCKPNLC-TYNALI-KMHGVRGKFPEMMAVFDEF--------- 391
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F P T+N L+ + V + EM+ G P ++ LI + G
Sbjct: 392 -RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 450
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A+QI K M E G+ PDV Y + R R +QA LF EM+ +P+ +Y +
Sbjct: 451 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 510
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMW 648
LL A Y + + + A+ D++
Sbjct: 511 LLHA---YANAKRLDKMKALSDDIY 532
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 188/422 (44%), Gaps = 22/422 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + +A+ YD ++ PN+ +I + G+ G + + A++++
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
RS +I +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCG 449
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +IY K + G+ DV TY+ ++ A W+ A K+ +M P+
Sbjct: 450 LFDLAMQIY---KRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 505
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++SSL++A ANA +++ L +++ EP++ L+ + A + F
Sbjct: 506 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF-- 563
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L + + +L D N + + + + S K + + TY
Sbjct: 564 LELRQKRCSL----DINVLNAMVSIYGKNRMVRKVEKIL------SLMKESAINLSAATY 613
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+
Sbjct: 614 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 673
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y +K V + ++A L M +PN TY +++ R G L +
Sbjct: 674 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 733
Query: 637 VQ 638
+
Sbjct: 734 AK 735
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 140/332 (42%), Gaps = 57/332 (17%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D +Y L+ A AG A ++ + + GV + + TY+ ++ V++ A W+
Sbjct: 153 DAGAYTALVSAFSRAGRFRDAVAVF---RRMVDSGV-QPAIVTYNVVLHVYSKMAVPWKE 208
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+++ M GV P+ T+++LI+ C L ++A +F+EM +G EP+ N LL
Sbjct: 209 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 268
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + D A + I ME
Sbjct: 269 VYGKARRHDEAIEV-----------------------IQEME------------------ 287
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
R P+ TYN L+ + D + AL EM G+ P+ +++T LI
Sbjct: 288 ------RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLD 341
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A+ M +G P++ Y IK+ + + ++F+E + P++V
Sbjct: 342 RAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIV 401
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T+ TLL + G EV V+++M KAG
Sbjct: 402 TWNTLLAVFGQNGLDSEVS---GVFKEMKKAG 430
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 55/398 (13%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDL 305
K+H +P+ Y T+I C Y ++ +++++++ + FNSL++V A
Sbjct: 217 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 276
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+EV + M+++G + +YN L+ + G L ++ + +E KG +K DV T
Sbjct: 277 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDG---LLEQAVALKQEMEVKG-MKPDVVT 332
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A A+ ++M+ G PN T+++LI G + M +F+E
Sbjct: 333 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 392
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--E 483
AG P+ N LL G++ G +S + E
Sbjct: 393 SAGFVPDIVTWNTLL-------------------------AVFGQN--GLDSEVSGVFKE 425
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K I +V S SS+ + F Y +M+A G
Sbjct: 426 MKKAGYIPERDTYV--SLISSYSRCGLFDLAMQIYKRMMEA------------------G 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ ++ A G E A ++ M E PD +Y++ + +KRL +
Sbjct: 466 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+L +++ +I+P+ TL+ S+ +L E ++
Sbjct: 526 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 563
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 65/315 (20%)
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
V A+E++GE GVL +T ++V A A L +L A P+
Sbjct: 108 AVAARELHGE-------GVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAG 155
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+++L++A + AG A+ +F M+ +G +P N++L
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------ 197
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK V E + +++M K P TYN
Sbjct: 198 VYSKMAVPWKE----VVELVASM------------------------KEHGVAPDRYTYN 229
Query: 520 ILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ +CC Y + +EM+ G P+ +++ L+D G + + A+++++ M
Sbjct: 230 TLI-SCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G P VV Y + I V+ L+QA +L +EM+ ++P++VTY TL+ R G +
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAG---K 345
Query: 637 VQQCLAVYQDMWKAG 651
+ + Y +M + G
Sbjct: 346 IDAAIVEYDEMVRNG 360
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 172/385 (44%), Gaps = 24/385 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMA 325
G + + A++ + V I +N +++V A K +E+ +M++ GV D
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRY 244
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A +++ E+K A G + D T+++++ V+ A+ A++V
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSLLDVYGKARRHDEAIEV 300
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M G P+ +T++SLI++ GL+EQA+ L +EM G +P+ L+
Sbjct: 301 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR 360
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + D A + + + L Y+ ++ + K + + F
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKPNLC-TYNALI-KMHGVRGKFPEMMAVFDEF--------- 409
Query: 506 DKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ F P T+N L+ + V + EM+ G P ++ LI + G
Sbjct: 410 -RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A+QI K M E G+ PDV Y + R R +QA LF EM+ +P+ +Y +
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMW 648
LL A Y + + + A+ D++
Sbjct: 529 LLHA---YANAKRLDKMKALSDDIY 550
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 188/422 (44%), Gaps = 22/422 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + +A+ YD ++ PN+ +I + G+ G + + A++++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
RS +I +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +IY K + G+ DV TY+ ++ A W+ A K+ +M P+
Sbjct: 468 LFDLAMQIY---KRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++SSL++A ANA +++ L +++ EP++ L+ + A + F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF-- 581
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L + + +L D N + + + + S K + + TY
Sbjct: 582 LELRQKRCSL----DINVLNAMVSIYGKNRMVRKVEKIL------SLMKESAINLSAATY 631
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y +K V + ++A L M +PN TY +++ R G L +
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751
Query: 637 VQ 638
+
Sbjct: 752 AK 753
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 140/332 (42%), Gaps = 57/332 (17%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D +Y L+ A AG A ++ + + GV + + TY+ ++ V++ A W+
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVF---RRMVDSGV-QPAIVTYNVVLHVYSKMAVPWKE 226
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+++ M GV P+ T+++LI+ C L ++A +F+EM +G EP+ N LL
Sbjct: 227 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 286
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + D A + I ME
Sbjct: 287 VYGKARRHDEAIEV-----------------------IQEME------------------ 305
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
R P+ TYN L+ + D + AL EM G+ P+ +++T LI
Sbjct: 306 ------RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLD 359
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A+ M +G P++ Y IK+ + + ++F+E + P++V
Sbjct: 360 RAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIV 419
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T+ TLL + G EV V+++M KAG
Sbjct: 420 TWNTLLAVFGQNGLDSEVS---GVFKEMKKAG 448
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 55/398 (13%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDL 305
K+H +P+ Y T+I C Y ++ +++++++ + FNSL++V A
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+EV + M+++G + +YN L+ + G L ++ + +E KG +K DV T
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDG---LLEQAVALKQEMEVKG-MKPDVVT 350
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A A+ ++M+ G PN T+++LI G + M +F+E
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 410
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--E 483
AG P+ N LL G++ G +S + E
Sbjct: 411 SAGFVPDIVTWNTLL-------------------------AVFGQN--GLDSEVSGVFKE 443
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K I +V S SS+ + F Y +M+A G
Sbjct: 444 MKKAGYIPERDTYV--SLISSYSRCGLFDLAMQIYKRMMEA------------------G 483
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ ++ A G E A ++ M E PD +Y++ + +KRL +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 543
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+L +++ +I+P+ TL+ S+ +L E ++
Sbjct: 544 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +GVL +T ++V A A L +L A P+ +++L++A +
Sbjct: 130 RELHGEGVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAGAYTALVSAFSR 184
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG A+ +F M+ +G +P N++L SK V E
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------VYSKMAVPWKE 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
+ +++M K P TYN L+ +CC
Sbjct: 227 ----VVELVASM------------------------KEHGVAPDRYTYNTLI-SCCRRRA 257
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y + +EM+ G P+ +++ L+D G + + A+++++ M G P VV Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V+ L+QA +L +EM+ ++P++VTY TL+ R G ++ + Y +M
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAG---KIDAAIVEYDEM 374
Query: 648 WKAG 651
+ G
Sbjct: 375 VRNG 378
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 159/362 (43%), Gaps = 56/362 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LE++ M+K G++AD +YN L+ C +G A +
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN +T++SLIN
Sbjct: 779 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A H+F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT---HQGL 891
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 892 VGDAF--------------------------------------------TYNTLIHGYCQ 907
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+ P+ +++ IL+D +G +E AL +++ ++++ M D++
Sbjct: 908 AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ-CLAVY 644
Y I+ R+ ++K+A+ LF + ++ + + YIT++ R G E + C +
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Query: 645 QD 646
+D
Sbjct: 1028 ED 1029
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 17/328 (5%)
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M K G ++ YN L+ C G+ +A E+ E +E KG L D+ TY+T++
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNE---MEKKGRLAADLVTYNTLLTGL 216
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ W+ A ++ DM + P+ T+++LI+A G +++A L+++MLQ+ PN+
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N L+ C R + +++ L ++ NT + N K ++
Sbjct: 277 VTYNSLING---LCMHGRLYHAKKTFDLMASKGCFPNVVTYNT--LINGFCKSRRVEDGM 331
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRV-KALMNEMRTVGLSPNHISW 551
F Y R T TYN L+ C RV K + + M + G++P+ I+
Sbjct: 332 KLF--QRMY-----REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
IL+ +G + A+ MR +VAY I ++ ++++A+ LF +
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++P+ TY ++ + G E +
Sbjct: 445 EGVKPDARTYTIMILGLCKNGPRREADE 472
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 161/372 (43%), Gaps = 37/372 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V ++ +N D+ + ++ M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 621 VLTAIAKMNKFDI--VIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMK 678
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANA 411
L + + T +++ F +Q A+ + + M G+ PN + ++++IN C N
Sbjct: 679 LG----FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------ 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 735 DL-NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793
Query: 466 VALGEDY--DGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSF-------DKRFSFK--- 512
AL + + +GN N+ +K+ + PN + NS + F D + F
Sbjct: 794 TALIDTFVKEGNLLEAKNL-YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852
Query: 513 -----PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C RV+ L EM GL + ++ LI +G +
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++ M + G+ PD+V Y + + ++++A + E+++ Q+ +++TY +
Sbjct: 912 NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Query: 625 LRARSRYGSLHE 636
++ R + E
Sbjct: 972 IQGMCRNDKVKE 983
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 37/352 (10%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
R R + +L K+ +LG P + GS LL CQ + V L++ + E
Sbjct: 662 RCSRFSLALALLGKMMKLGFQPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMAEL 714
Query: 185 RLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADIL------------FCNFVREFG 232
L + I LC N+ D+N A+ + + I+ CN G
Sbjct: 715 GLEPNVVIYNTVINGLCKNR-DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS----G 769
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ D LR D K+ + PN+ +ID G+ ++++ +Y+++ ++V NI
Sbjct: 770 RWTDAARLLR--DMVKRKID-PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYG 348
+NSL +N ++ L K+M L G D+ +YN L+ C + +++
Sbjct: 827 TYNSL--INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ H G D FTY+T++ + A +A KV M+ GV P+ +T++ L++
Sbjct: 885 EMTHQGLVG----DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
N G +E+A+ + E++ + + + NI++Q + A+ LFRS T
Sbjct: 941 CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 118/294 (40%), Gaps = 55/294 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D+++++ ++ F +AL + M+ G P+ +T+ SL++ + A L
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M+++G EPN N L+ + + A L ++
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL-----------------------LNE 195
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
ME K + TYN L+ C ++ + ++ +M
Sbjct: 196 MEKKGR-----------------------LAADLVTYNTLLTGLCYSGEWRQAARILRDM 232
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
++P+ ++T LIDA GN++ A ++ K M + + P+ V Y + I RL
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA--RSRYGSLHEVQQCLAVYQDMWKAG 651
A F+ M PN+VTY TL+ +SR V+ + ++Q M++ G
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSR-----RVEDGMKLFQRMYREG 341
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 174/444 (39%), Gaps = 76/444 (17%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G+ + + D+RS L I +N +++ A ++ E++ + GV
Sbjct: 390 GLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKP 449
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKGVLKLDVFTYSTIVK 371
D +Y I++ C G A E++ +K HL G + + TI+
Sbjct: 450 DARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTN--NQVSLGTII- 506
Query: 372 VFADAKWWQMALKVKEDMLSAG----VTPNTITWSSLIN--ACANAGLVEQAMHLFEEML 425
+ K + ++ +G +T WSSL+ A++ V+ + +L
Sbjct: 507 ---------ICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLL 557
Query: 426 QAGCEPNSQCCNIL---------------LQACVEACQFDRAFRLFRSWTLSK------- 463
+ G P S+ + L++ + +FD AF LF S+
Sbjct: 558 ERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVD 617
Query: 464 -----TQVALGEDYDGNTDRISNMEH----KDKQSITNTPN-FVPNSHYS------SFDK 507
T +A +D ME+ D S T + F S +S
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P+ T L+ C + +L++ M +GL PN + + +I+ + ++
Sbjct: 678 KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL+I M + G+ D V Y T I S R A L +M +I PN++ + L+
Sbjct: 738 NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797
Query: 626 RARSRYGSLHEVQQCLAVYQDMWK 649
+ G+L E + +Y++M +
Sbjct: 798 DTFVKEGNLLEAKN---LYKEMIR 818
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 176/457 (38%), Gaps = 59/457 (12%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + F K+ +L A Y + PN ++I+ G+C G ++ ++
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN--GLCMHGRLYHAKKTFDL 301
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ N+ +N+L+N + ++ +++++ M + G++ D +YN L+ C G
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A++I+ + + GV D+ T+ ++ A+ DM S +
Sbjct: 362 LRVAKDIF---SWMVSCGVTP-DIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIV 417
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ +I+ A VE+A LF + G +P+++ I++ + A LFR
Sbjct: 418 AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM 477
Query: 460 TL----------------SKTQVALGEDYDGNTDRISNME-------HKDKQSITNTPNF 496
+ QV+LG R S ME + D ++
Sbjct: 478 KEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGL 537
Query: 497 VPNSHYSS---FDKRFSF------KPTTTTYN-----------------ILMKACCTDYY 530
+P + SS F +R P + +++ + + C +
Sbjct: 538 IPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFD 597
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L EM P+ + +T ++ A + + + M G+S D+ ++T I
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R R A +L +M QP++VT +LL
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNG 694
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ R LR D +K+ ++ P+++ +ID G+ +++ +Y+ + ++ N
Sbjct: 220 GEWRQAARILR--DMTKRRIN-PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 292 YVFNSLMN-VNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+NSL+N + H L + + M G ++ +YN L+ C + +++
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF-- 334
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ + +G++ D FTY+T++ + ++A + M+S GVTP+ IT L++
Sbjct: 335 -QRMYREGLVG-DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G + AM F +M NI++ +A + + A+ LF
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF 439
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 101/257 (39%), Gaps = 20/257 (7%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML + P+ + ++ ++ A A + ++LF +M G + IL+
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664
Query: 448 QFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+F A L + V LG +G ++ S+ ++
Sbjct: 665 RFSLALALLGKMMKLGFQPSIVTLGSLLNGFC---QGNRFQEAVSLVDSM---------- 711
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+P YN ++ C D + M G+ + +++ LI SG
Sbjct: 712 --AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
A ++L+ M + + P+V+ +T I V+ L +A +L++EM + PN++TY
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829
Query: 623 TLLRARSRYGSLHEVQQ 639
+L+ G L + +
Sbjct: 830 SLINGFCIQGRLGDAKH 846
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 97/209 (46%), Gaps = 6/209 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F K+ +L+ A Y + PN+ ++I+ I G ++ +++
Sbjct: 791 IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ ++ +N+L+ + ++ ++++ M G++ D +YN L+ C AG
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+AQ+++ + GV D+ TY+ ++ + + AL + ED+ + + I
Sbjct: 911 LNVAQKVFNRMVDC---GVPP-DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDII 966
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T++ +I V++A LF + + G
Sbjct: 967 TYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ + L+ A Y V +M G+S + S+TILI + AL I
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 571 LKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
L M + G P +V + + + C+R+ R+ AFSL M +PN+V Y TL+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRN-RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G +V L + +M K G
Sbjct: 182 KNG---DVNIALELLNEMEKKG 200
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M +G+S + S+TILI AL +L M + G P +V + +
Sbjct: 637 LFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFC 696
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R ++A SL + M ++PN+V Y T++ + ++ L ++ M K G
Sbjct: 697 QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN---RDLNNALEIFYGMEKKG 750
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSP 546
+I N + ++S + F ++ IL+ C C+ +++ +M +G P
Sbjct: 74 AIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDP 133
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ L+ + A ++ M + G P+VV Y T I ++ + A L
Sbjct: 134 SIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELL 193
Query: 607 EEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
EM K ++ +LVTY TLL G E +Q + +DM K
Sbjct: 194 NEMEKKGRLAADLVTYNTLLTGLCYSG---EWRQAARILRDMTK 234
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 143/612 (23%), Positives = 248/612 (40%), Gaps = 78/612 (12%)
Query: 77 MASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSL--EMVASGIVKSIREGRIDCVVG 134
+ S LA+D L + E ++ G F M L EM G + G + +G
Sbjct: 76 LNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREG--HEVGLGLVQSFIG 133
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEE 194
A L+LFD F L+ N+ E++ L+ VL E +K L+
Sbjct: 134 --------SYARLQLFD-DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS-KIKLLESA 183
Query: 195 FRIVQLCVNKPDV---NLAIRYACIVPRA------------------DILFCNFVREFGK 233
+ + +PDV N I C +A + F + F +
Sbjct: 184 YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVE 243
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIID-VC--GICGDYMK--SRAIYEDLRSQNVT 288
+ + +ALR + SP +I+ C G GD + + I + VT
Sbjct: 244 EGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVT 303
Query: 289 LNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +V N L N H + L+V M + G D+ +Y+ ++ CL N L +E G
Sbjct: 304 FSTFV-NGLCQ-NGH-VDHALKVLGLMLQEGCEPDVYTYSTVIN--CLCNNGEL-EEAKG 357
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
V + G L D T++T++ + AL + ++ G++PN T++ LINA
Sbjct: 358 IVNQMVDSGCLP-DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQ 465
G A+ LFEEM +GC P+ NIL+ + + +A L + +S ++
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 466 VALGEDYDG--NTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI E D+ +T T+N L+
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVT------------------GIGRNAITFNTLI 518
Query: 523 KACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
C + R+ L+++M + GL PN++++ ++ GN+ A IL+ M +G
Sbjct: 519 DGLC-NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y T I +++R + A L M+ ++P Y ++++ R + +
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRG---NNGRD 634
Query: 640 CLAVYQDMWKAG 651
L+++++M + G
Sbjct: 635 ALSLFREMTEVG 646
>gi|168014765|ref|XP_001759922.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689052|gb|EDQ75426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 193/444 (43%), Gaps = 45/444 (10%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F NF+ + ++ ++ K+ + N +I+ G G + + +++ ++R
Sbjct: 241 FGNFLETGSSEAQPLTGFHHWEVRKELQDAFN-----ALINAAGQAGQHKLAESLFSEMR 295
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + L+IY FN+L+ V + L V ++M+ +GV D ++ LL +G
Sbjct: 296 NLGLRLSIYTFNALLRAVVEGRGVSHALRVVRSMEAVGVRPDTHTFTTLLDGYSRSGKLD 355
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + +++ ++K + ++TY+ ++K A + AL+V M +G P++ T+
Sbjct: 356 KAEALLAKME--DSKPNQRPSIYTYNILIKACASKNDPERALRVFAKMKESGTAPDSHTY 413
Query: 402 SSLINACANAG-------------LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+L++AC + ++ + + ++M Q+G + + L+
Sbjct: 414 CALLSACGAVSGRPDLSDAWSRKEVAQRVIAIEKDMAQSGVHHTAASVSALMSVLGSEGI 473
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHY-SSFD 506
D + R+ TD + + D + N FV + + ++D
Sbjct: 474 VDAMLQNLRACQ--------------ETDLTTRKKLLDTTAYNTAMNAFVQSKKFDEAWD 519
Query: 507 -----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
+ +P TYNIL+ AC A LM+ MR ++P+ I++ LI
Sbjct: 520 IFTEMRSLDVRPDIYTYNILINACSHKQSVSTALELMDIMRKAKIAPDLITYNSLIKVMC 579
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G ++ L++L M++ G+ PDV + T + KR A L EEM+ + P+
Sbjct: 580 HCGELDSGLRVLGEMQDAGVQPDVTTFNTLLASASYHKRKGLAEYLVEEMRLCNVAPDTH 639
Query: 620 TYITLLRARSRYGSLHEVQQCLAV 643
T ++ R G+L E + L+V
Sbjct: 640 TCSQVISLYMRSGNLAEASEALSV 663
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 162/396 (40%), Gaps = 120/396 (30%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV K +Q ++N L+ A AG LA+ ++ E+++L L+L ++T++ +
Sbjct: 262 EVRKELQD--------AFNALINAAGQAGQHKLAESLFSEMRNLG----LRLSIYTFNAL 309
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + + AL+V M + GV P+T T+++L++ + +G +++A L +M +
Sbjct: 310 LRAVVEGRGVSHALRVVRSMEAVGVRPDTHTFTTLLDGYSRSGKLDKAEALLAKMEDS-- 367
Query: 430 EPNSQCC----NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+PN + NIL++AC +RA R+F K
Sbjct: 368 KPNQRPSIYTYNILIKACASKNDPERALRVFA---------------------------K 400
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--------CTDYY------- 530
K+S T P+SH TY L+ AC +D +
Sbjct: 401 MKESGT-----APDSH---------------TYCALLSACGAVSGRPDLSDAWSRKEVAQ 440
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP-----DVVA 585
RV A+ +M G+ S + L+ G G V+ LQ L+ +E ++ D A
Sbjct: 441 RVIAIEKDMAQSGVHHTAASVSALMSVLGSEGIVDAMLQNLRACQETDLTTRKKLLDTTA 500
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMK-------------------HYQ------------- 613
Y TA+ V+SK+ +A+ +F EM+ H Q
Sbjct: 501 YNTAMNAFVQSKKFDEAWDIFTEMRSLDVRPDIYTYNILINACSHKQSVSTALELMDIMR 560
Query: 614 ---IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I P+L+TY +L++ G L + L QD
Sbjct: 561 KAKIAPDLITYNSLIKVMCHCGELDSGLRVLGEMQD 596
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 60/386 (15%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAH 303
KK+ ++Y T+I G+CG + + +Y+++ V+ ++ V+N+++N + A
Sbjct: 282 KKNERGQDLYTYSTLIH--GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 340 RIEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADS 394
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY +V + AL + E+ + +T +SS+IN G +++ + ++
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC+PN CN ++ V A + + A R F NM
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFF-----------------------GNMV 491
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT 541
K F PT TYN L+ + AL+ EM
Sbjct: 492 SK-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLH 527
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++++L++ ++ AL + E G PDV + I S +++
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
A L+ EMK + PNLVT+ TL+
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEG 613
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 181/400 (45%), Gaps = 33/400 (8%)
Query: 242 RAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+ +D +K+ L+ SP+++ T+I+ G + +++++ + VT ++ +
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 222
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N L++ D+ E+++ + K V ++ SYN+++ C G + EI+ +K
Sbjct: 223 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 282
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E D++TYST++ + A +V ++M GV+P+ + +++++N A
Sbjct: 283 KNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E+ + L++ M + GC NIL++ E + D A + W L + D
Sbjct: 339 GRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----D 389
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTD- 528
++ + H N N S ++ + + T Y+ ++ C +
Sbjct: 390 CCADSMTYGVLVH------GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V ++++M G PN +I+ + +E AL+ M G P VV Y
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
T I +++R +A++L +EM H +PN++TY L+
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 213 RGVTPDVACYNILI---------DGFFK-------------------------------- 231
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 232 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRG 368
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 153/358 (42%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 120 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 174
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 175 MWEQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ A ++E +L+ PN N+++ + +FD +F ++ ++ L
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 469 -----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 354 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV L
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 198/509 (38%), Gaps = 98/509 (19%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y M + L K G+ +E I + +E + + + + G+ S G +D
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNE----RGQDLYTYSTLIHGLCGS---GNLDGAT 310
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE--------FR 185
V K++ E GV+P D + + N L +G +E + L +V+E+ +
Sbjct: 311 RVYKEMAENGVSP----DVVVYNTMLNG---YLRAGRIEECLELWKVMEKEGCRTVVSYN 363
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD-----ILFCNFVREFGKKRDLVSA 240
+ ++ L E + V+ AI ++P D + + V K L A
Sbjct: 364 ILIRGLFENAK----------VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
L + ++ + + ++I+ G+C G + + + + N +V N+++
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMIN--GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N V A L+ L + NM G + +YN L+ A E Y VK + K
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF---SEAYALVKEMLHK 528
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K ++ TYS ++ K MAL + L G P+ + +I+ ++G VE
Sbjct: 529 G-WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L+ EM Q C PN N L++ + F+RA +++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW-------------------- 627
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--- 533
D I ++ +P +YNI +K C+ +R+
Sbjct: 628 DHIL---------------------------QYGPQPDIISYNITLKGLCS-CHRISDAV 659
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSG 562
+N+ G+ P I+W IL+ A +G
Sbjct: 660 GFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 39/298 (13%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
T++K +A AL + + M G P +++SL+NA + ++A F
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN Q NIL++ QFD+A L +W + D I+++
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELL-NWMWEQ---GFSPDVFSYGTLINSL---- 194
Query: 487 KQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTDYYRVKALMNE-- 538
N + S K F P YNIL+ +++ ++N
Sbjct: 195 ----------AKNGYMSDALKLFDEMPERGVTPDVACYNILIDG----FFKKGDILNASE 240
Query: 539 -----MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ + PN S+ ++I+ G + + +I M+++ D+ Y+T I
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S L A +++EM + P++V Y T+L R G +++CL +++ M K G
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG---RIEECLELWKVMEKEG 355
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 149/356 (41%), Gaps = 55/356 (15%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
IY +N L++ H + L V+ + + G+ D+ SYN L+ G A E++
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF- 180
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
K +E + DV TY++++ K + +V E M+ AG+ PN T++SLI
Sbjct: 181 -YKMIEQS--VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ AG+ ++++ +F+EM +G P CN + A + A +F S L
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP---- 293
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
KP +Y+ L+ +
Sbjct: 294 -------------------------------------------KPNIISYSTLLHGYAAE 310
Query: 529 --YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + +L+N M + G+ PNH + ILI+A G ++ A+ I + M+ GM PD V +
Sbjct: 311 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 370
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
T I R RL A F M + P+ Y L++ +G L + ++ ++
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELIS 426
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 183/449 (40%), Gaps = 52/449 (11%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVT 288
F K+ ++ A + + SP++ ++ID G+C + +KS + E + +
Sbjct: 167 FSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLID--GLCKTKEMVKSERVLEQMVDAGIR 224
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N +NSL+ A K ++ V+K M G++ + + N + A C A++I
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284
Query: 347 YGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKVFA 374
+ V + +KG++ F ++ ++ +A
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF-FNILINAYA 343
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A+ + EDM + G+ P+T+T++++I++ G ++ A+H F M+ G P+
Sbjct: 344 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEA 403
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+Q C + +A L S ++K G Y + I+N+ + + +
Sbjct: 404 VYRCLIQGCCNHGELVKAKELI-SEMMNKDIPPPGVKYFSSI--INNLFKEGRVA----- 455
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
+ +P T+N LM+ C + AL++ M ++G+ PN +
Sbjct: 456 ---EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D +G ++ AL + + M G+ P V Y + +++R A +F EM
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ TY +L R E L
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLL 601
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 166/409 (40%), Gaps = 34/409 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
P++ T+ID G+ K+ ++ + Q+V+ ++ +NSL++ ++ +
Sbjct: 154 GPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSER 213
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G+ + +YN L+ AG + +E K + + G++ V ++ +
Sbjct: 214 VLEQMVDAGIRPNNKTYNSLIYGYSTAG---MWKESVRVFKEMSSSGLIPC-VVNCNSFI 269
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A + + M+ G PN I++S+L++ A G L M+ G
Sbjct: 270 HALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIV 329
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHK 485
PN + NIL+ A D+A +F + A R+ + HK
Sbjct: 330 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+ P+ Y L++ CC VKA L++EM
Sbjct: 390 FNHMVD-----------------IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432
Query: 544 LSPNHISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P + + + +I+ G V I+ +M + G P+VV + + ++ +++A
Sbjct: 433 IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 492
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+L + M I+PN Y TL+ + G + L V++DM G
Sbjct: 493 FALLDAMASIGIEPNCYIYGTLVDGYCKNG---RIDDALTVFRDMLHKG 538
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 513 PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
PT TYNIL+ C +R + A+ + GL P+ S+ LID G V+ A +
Sbjct: 120 PTIYTYNILID-CYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E +SPDVV Y + I ++K + ++ + E+M I+PN TY +L+ S
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G E + V+++M +G
Sbjct: 239 TAGMWKE---SVRVFKEMSSSG 257
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ ILID E AL + + G+ PDV +Y T I + + +A+
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 605 LFEEMKHYQIQPNLVTYITLL 625
LF +M + P++VTY +L+
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLI 199
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/232 (17%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++++ + G+ ++ A+ + + S + N Y++ +L++ + + L V
Sbjct: 471 PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 530
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY------GEVKHLEAKGVL------ 359
+++M GV YNI+L A T A++++ G ++ GV+
Sbjct: 531 FRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR 590
Query: 360 -------------------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
K D+ T++ ++ Q A ++ + + G+ P T
Sbjct: 591 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT 650
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
++ +I+ E+A +LF + ++G P+S+ N +++ ++ + +A
Sbjct: 651 YNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 702
>gi|145353124|ref|NP_195209.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g34830, chloroplastic; Flags: Precursor
gi|332661026|gb|AEE86426.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +L + T++ ++ V A ++ + A V + +G+T + +++LI++CA +G V+
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+F +M +G E N L+ C A Q +AF +
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY------------------- 560
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
I + N KP +N L+ AC R
Sbjct: 561 -------------GILRSKNV---------------KPDRVVFNALISACGQSGAVDRAF 592
Query: 534 ALMNEMR--TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ EM+ T + P+HIS L+ AC +G VE A ++ +++ + G+ YT A+
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C +S A S++++MK + P+ V + L+ G + + + QD G
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFGILQDAKSQG 709
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 182/428 (42%), Gaps = 42/428 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
N +I ++++ G ++ A+++D ++L+ + +L++ A D+ +
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ + ++ D YN+ + C+ G A+ E++++ LK D TY+T++
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG----LKPDQSTYNTMIVS 598
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
ALK+ +M + + PN IT+++L+ G VE+A +L EM+ AG P+
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED------------YDGNTDRIS 480
S +LQAC ++ + D + W ++ L D Y G T + +
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDI-HEWMMN---AGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 481 NMEHK------DKQSITNTPNFVPNSHYSSFDKRFS---------FKPTTTTYNILMKA- 524
+ + +IT + + S D F+ P T+N L+
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774
Query: 525 -CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
++ EM GL PN++++ IL G N A+++ M G P V
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y I ++ + QA LF++M+ + P TY L+ SR + EV++CL
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL-- 892
Query: 644 YQDMWKAG 651
+DM + G
Sbjct: 893 -KDMKEKG 899
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 144/334 (43%), Gaps = 27/334 (8%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +N L+ C G+T A + + A+G L +DV Y+T+V F A A
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSV---ADRMTAQG-LPMDVVGYNTLVAGFCRAGQVDAA 223
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
V + M AGV PN T++ I VE+A L+E M++ G + + L+
Sbjct: 224 RGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+F A+ LFR + K A Y D ++ + K+ ++ V
Sbjct: 284 LCRDGRFSEAYALFRE--MDKVGAAPNHVTYCTLIDSLAK-AGRGKELLSLLGEMVSRGV 340
Query: 502 YSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
TY LM K TD VK + + LSPN +++T+LIDA
Sbjct: 341 VMDL----------VTYTALMDWLGKQGKTD--EVKDTLRFALSDNLSPNGVTYTVLIDA 388
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ NV+ A Q+L M E +SP+VV +++ I V+ L +A MK I PN
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+VTY TL+ ++ L VY DM G
Sbjct: 449 VVTYGTLIDGFFKF---QGQDAALEVYHDMLCEG 479
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 190/502 (37%), Gaps = 114/502 (22%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-----VNAHDLK 306
++PN T+ID G + ++ ++ S+ V +++ + +LM+ ++K
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364
Query: 307 FTLE--VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-------------- 350
TL + N+ GV +Y +L+ A C A N A+++ E+
Sbjct: 365 DTLRFALSDNLSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 351 ------------KHLEAKGVLK-----LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
K E K ++K +V TY T++ F + AL+V DML G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V N SL+N G +E+AM LF++ +G + L+ +A AF
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539
Query: 454 RLFRSWTLSKTQVA--------------LGEDYDGNT--DRISNMEHKDKQSITNTPNFV 497
+ F + + + LG+ + + + NM K QS NT +
Sbjct: 540 K-FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT---M 595
Query: 498 PNSHYSSFD-----------KRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL 544
SH + K S KP TYN L+ + K L+NEM + G
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 545 SPNHISWTILIDACGGS-----------------------------------GNVEGALQ 569
SP+ ++ ++ AC S G A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L+ M G++PD + + I +S L AF+ + +M H I PN+ T+ TLL
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G + E L +M K+G
Sbjct: 776 SVGRIGEAGTVLI---EMEKSG 794
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 21/350 (6%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L V M G+ D+ YN L+ C AG A+ G + ++ GV +V
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAAR---GVLDMMKEAGV-DPNV 239
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ + + K + A + E M+ GV + +T S+L+ G +A LF E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G PN L+ + +A + L +S+ V Y D +
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM-VSRGVVMDLVTYTALMDWLGKQG 358
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRT 541
D+ + +T F + + S P TY +L+ A C + + ++ EM
Sbjct: 359 KTDE--VKDTLRFALSDNLS---------PNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+SPN ++++ +I+ G ++ A + ++M+E G++P+VV Y T I + +
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ +M ++ N +L+ + G ++++ +A+++D +G
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG---KIEEAMALFKDASGSG 514
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 133/357 (37%), Gaps = 63/357 (17%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+K + AL+ K PN+ T++ G K++ + ++ S + +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++ + L L++++ M G+ AD+ YN LL+ C G T A + +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV---L 717
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + G+ D T++ ++ + A ML ++PN T+++L+ +
Sbjct: 718 EEMLGSGIAP-DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A + EM ++G EPN+ +IL + A RL+
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------------- 822
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
M K F P +TYN L+ +D+
Sbjct: 823 ---------CEMVGK------------------------GFVPKVSTYNALI----SDFT 845
Query: 531 R------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ K L +M+ G+ P ++ IL+ N + LK M+E G SP
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y + QN++ NI FN+L+ + + V M+K G+ + +Y+IL
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N V A +Y E + KG + V TY+ ++ F A A ++ +DM GV
Sbjct: 810 GKQSNKVEAMRLYCE---MVGKGFVP-KVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + T+ L++ + + ++M + G P+ + + +A + +A R
Sbjct: 866 HPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQR 925
Query: 455 LFRS 458
L ++
Sbjct: 926 LLKN 929
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 56/397 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN Y +I G + ++ +D+ + ++ +N L+ + +E+
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+ G + +YN+L+ C G+ A E+ +++L + G K Y+T++K
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL---LRNLPSHGC-KPSTVNYNTVLK 120
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A+ W A ++ +ML PN T++ +I + GL++QA+ L E+M + GC
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N ++ E D A L LSK
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGL-----LSKM--------------------------- 208
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
K + KP TYN L+K C+ V A LM+ M G P+++
Sbjct: 209 ---------------KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNV 253
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI G + A+++ K M + G +P+ + Y+T I ++ +L QA LF EM
Sbjct: 254 TFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 313
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
H P+ + Y L + ++ E Q + QD
Sbjct: 314 GHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 349
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 175/428 (40%), Gaps = 48/428 (11%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E G+ RD +S L D +P++ +++ Y ++ + + +R++ T
Sbjct: 19 ERGQVRDALSVL---DDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTP 75
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N +N LM+ D+ LE+ +N+ G +YN +LK C A A E+
Sbjct: 76 NNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELV 135
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E+ + T++ ++ Q A+++ E M G T N +T++++IN
Sbjct: 136 TEMLRENCPP----NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
V+ AM L +M GC+P+ N LL+ A ++ A L + T +
Sbjct: 192 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG---C 248
Query: 468 LGEDYDGNT------------DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
L ++ NT D I + + T P +
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT---------------------PNS 287
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+ ++ A T + L NEM G +P+ I + +L + +E A+Q ++
Sbjct: 288 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 346
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+++ G+SP V Y + R+ + + A + M P+ +TY+ L+ + G
Sbjct: 347 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 406
Query: 634 LHEVQQCL 641
L+E ++ L
Sbjct: 407 LNEARELL 414
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL++A C Y + L++ MR G +PN++++ +L+D G G+V+ AL++
Sbjct: 40 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 99
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L+ + G P V Y T +K ++R A L EM PN T+ ++ + R
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G L QQ + + + M K G
Sbjct: 160 KGLL---QQAIQLLEKMSKHG 177
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDA-CGGSGNVE 565
+P TYN L+ C AL +++M G +P+ +++ IL++A C G G +
Sbjct: 1 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A++++ +MR +G +P+ V Y + + A L + + +P+ V Y T+L
Sbjct: 61 -AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119
Query: 626 R---ARSRYGSLHEV 637
+ + R+G E+
Sbjct: 120 KGLCSAERWGDADEL 134
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ PN ++ LI G V AL +L M G +PDVV Y ++ + + +QA
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
L + M+ PN VTY L+ G + + + L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELL 100
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKS 275
P + F + +K L A++ + KH + N+ II+ G+C + +
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN--GLCEQRNVDGA 201
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ ++S +I +N+L+ +A E+ NM + G + D ++N L+
Sbjct: 202 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGF 261
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM---- 389
C G V A E++ K + KG + TYSTI+ A A AL++ +M
Sbjct: 262 LCQKGLMVDAIEVF---KQMPDKGCTP-NSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 390 ------------------------------LSAGVTPNTITWSSLINACANAGLVEQAMH 419
+G++P+T+ +++++ G E A+
Sbjct: 318 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 420 LFEEMLQAGCEPNSQCCNILLQA 442
+ M+ +GC P+ IL++
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEG 400
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 192/434 (44%), Gaps = 65/434 (14%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICR-----TIIDVCGICGDYMKSRAIYED 281
FV+ G++ AL ++ +KH + + R +I+ V G + ++E
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKH----DCFKLRGVATASILSVLGNHEQLPAALELFES 63
Query: 282 LRS-QNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
L+ ++ +L++Y + SL+++ + +F + +++ MQ+ G + +YN++L G
Sbjct: 64 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 123
Query: 339 NTV-LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ Q ++ E+K LE + D +TY+T++ Q AL++ ++M AG PN
Sbjct: 124 DSWDRIQSLFQEMKDLE----ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 179
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L++ G+ ++A L EM AG PN N L+ A A D A L +
Sbjct: 180 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 239
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S LSK L D F + S+F++ ++ T
Sbjct: 240 S-LLSK---GLCPD-----------------------EFTYCTLISAFNRAERYEKALET 272
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ EMR +PN +++ ILID G ++ +++ K M+E
Sbjct: 273 FT------------------EMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 314
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+PD+V + + +K L + ++F EMK P + T+ L+ YG V
Sbjct: 315 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC---YGRCGYV 371
Query: 638 QQCLAVYQDMWKAG 651
+ +Y+ + + G
Sbjct: 372 DYSVDIYKGLLRTG 385
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 183/436 (41%), Gaps = 59/436 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ +C + F + AL + +K +PN+ +ID+ G +++
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 281 DLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +N T ++ +NSL+ N L V++ M++ G M + ++NIL++ G
Sbjct: 310 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCG 369
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ +IY K L G L+ V T++ ++ A WQ KV ++M AG+ +
Sbjct: 370 YVDYSVDIY---KGLLRTG-LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 425
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC-CNILLQACVEACQFDRAFRLFR 457
+ LI++ AN+G Q +E+ ++ +P S C + A + C + A
Sbjct: 426 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEA----- 480
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
Q+AL + YD N H P
Sbjct: 481 -------QLALNQLYD-------------------------NGH----------SPDIKV 498
Query: 518 YNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N ++ C + R L+ E+R L P+ +++ L+ G G A +++ MR
Sbjct: 499 FNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMR 558
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G +P+++ Y T + + R+ A +F +M +++P+ T+ TL+ Y SL
Sbjct: 559 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV---GSYSSLG 615
Query: 636 EVQQCLAVYQDMWKAG 651
++ L+V + M + G
Sbjct: 616 LYKEALSVIEYMTEHG 631
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 241 LRAY-DASKKHLSSP-NMYICRT-IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
LR Y D +K P + +C+T ++ C C D A+ L + +I VFN++
Sbjct: 444 LRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLAL-NQLYDNGHSPDIKVFNAM 502
Query: 298 MNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+++ A ++ +++ + ++K + D +YN L+ G A+E+ E++
Sbjct: 503 ISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMR---- 558
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ ++ TY+T++ + A +V DM++A V P+ T+++L+ + ++ GL +
Sbjct: 559 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 618
Query: 416 QAMHLFEEMLQAGCEP 431
+A+ + E M + GC+P
Sbjct: 619 EALSVIEYMTEHGCQP 634
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
SP++ + +I +C G ++ + E++R + + +N LM++ + + E
Sbjct: 493 SPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEE 552
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V M++ G ++ +YN LL + G A ++G++ ++ D FT++T+V
Sbjct: 553 VMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM----VAARVRPDNFTFNTLV 608
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ ++ AL V E M G P IT+ +L++
Sbjct: 609 GSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
>gi|110741791|dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +L + T++ ++ V A ++ + A V + +G+T + +++LI++CA +G V+
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+F +M +G E N L+ C A Q +AF +
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY------------------- 560
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
I + N KP +N L+ AC R
Sbjct: 561 -------------GILRSKNV---------------KPDRVVFNALISACGQSGAVDRAF 592
Query: 534 ALMNEMR--TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ EM+ T + P+HIS L+ AC +G VE A ++ +++ + G+ YT A+
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C +S A S++++MK + P+ V + L+ G + + + QD G
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFGILQDAKSQG 709
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|110740372|dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +L + T++ ++ V A ++ + A V + +G+T + +++LI++CA +G V+
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+F +M +G E N L+ C A Q +AF +
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY------------------- 560
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
I + N KP +N L+ AC R
Sbjct: 561 -------------GILRSKNV---------------KPDRVVFNALISACGQSGAVDRAF 592
Query: 534 ALMNEMR--TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ EM+ T + P+HIS L+ AC +G VE A ++ +++ + G+ YT A+
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C +S A S++++MK + P+ V + L+ G + + + QD G
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFGILQDAKSQG 709
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ + Q ++ ++ +NS+++ A + V M K G M + ++N LL C
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G + G K + GV + DVFTY+T++ A K+ + M+ G
Sbjct: 285 SSGK---PNDAIGVFKRMCRDGV-EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN+ T+ +L++ A G + + HL + M++ G +P+ NIL+ + + D A L
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 456 F---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPNFVPNSHY------ 502
F R L+ V G D ++ + + + I+ TP+ V +
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 503 -SSFDKRFSFK---------PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+DK P +N L+ C + R K + + M V + + I+
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LID G V+ A ++L+ M DG+ P+ V Y T I ++ R++ AFSLF +M
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA 580
Query: 611 HYQIQPNLVTYITLLRA 627
+ P +VTY T+L+
Sbjct: 581 SKGVNPGIVTYSTILQG 597
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 162/395 (41%), Gaps = 24/395 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV-- 311
PN+ +ID C G + A + T F+ L+ D K T E
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC-DKKRTSEAMD 147
Query: 312 --YKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYST 368
+ M LG ++ SY ILLK C + A ++ + + +G DV +Y+T
Sbjct: 148 IALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207
Query: 369 IVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + + A + + ML G++P+ +T++S+I+A + A +++A + M++
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G PN N LL + + + A +F+ DG +
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMC-----------RDGVEPDVFTYNTLMG 316
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
N + + S KR KP + TY L+ T+ VK L++ M G+
Sbjct: 317 YLCKNGRSMEARKIFDSMVKR-GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+H + ILI G V+ A+ + MR G++PD V Y + ++ A +
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435
Query: 606 FEEMKHYQIQPNLVTYITLLR---ARSRYGSLHEV 637
F + + P+ V + L+ AR ++ E+
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 15/286 (5%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL- 420
++ TYS ++ + +A ++ +G T IT+S L+ A + +AM +
Sbjct: 90 NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK-TQVALGEDYDGNTDRI 479
M GC PN ILL+ + + +A L + ++ T+ D I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKALMN 537
+ + + +Q ++ Y FD+ P TYN ++ A KA +
Sbjct: 210 NGLLREGRQL---------DTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260
Query: 538 EMRTV--GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+R V G PN I+ L+ SG A+ + K M DG+ PDV Y T + +
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ R +A +F+ M +PN TY TLL + GSL ++ L
Sbjct: 321 NGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLL 366
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 21/311 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ SYN ++ G + Y + +G L DV TY++I+ + A+
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQL--DTAYHLFDQMLDQG-LSPDVVTYNSIISALSKARA 253
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A V M+ G PN IT +SL++ ++G A+ +F+ M + G EP+ N
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ + + A ++F S + + N+ + H + V
Sbjct: 314 LMGYLCKNGRSMEARKIFDSM--------VKRGHKPNSATYGTLLH----GYATEGSLVK 361
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILI 555
H R +P +NIL+ T + +V L ++MR GL+P+ +++ I++
Sbjct: 362 MHHLLDMMVRNGIQPDHYIFNILI-GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQI 614
DA G V+ A+ + +G++PD V + I +C R K +A L EM I
Sbjct: 421 DALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK-WDKAEELAVEMIGRGI 479
Query: 615 QPNLVTYITLL 625
PN + + TLL
Sbjct: 480 CPNNIFFNTLL 490
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 6/236 (2%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K + A+ + ++ +P+ ++D + G + A + L
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +T + VF +L++ K+ E+ M G+ + +N LL C G
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ I+ + ++ ++ DV TY+T++ + A K+ E M+ GV PN +T
Sbjct: 500 ARAKNIFDLMVRVD----VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++IN G +E A LF +M G P + +LQ +A + A L+
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELY 611
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 53/434 (12%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK DL S R + +H PN+ ++ G+C G ++ A+ +++ S+ + +
Sbjct: 235 KKGDLESGFRLWSQMLRHGLKPNVITYNVLLS--GLCRAGRMGETAAVLDEMASRKMVPD 292
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + ++ D + L +++ K GV + +ILL C G A+E+
Sbjct: 293 GFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV-- 350
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G+L+ V Y+T++ + + A + + M S + P+ IT+++LIN
Sbjct: 351 -LQTLVNSGLLQTTVI-YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ +A L EM + G P+ + N L+ A A Q ++ F +
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII------------- 455
Query: 469 GEDYDGNTDRISNMEHKDKQ-------SITNTPNFVPNSHY----SSFDKRF--SFKPTT 515
+S+M+ K + SI N F N + D F P
Sbjct: 456 ----------LSDMQEKGLKPNVVSYGSIVNA--FCKNGKILEAVAILDDMFIKDVLPGA 503
Query: 516 TTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN ++ A C + L +M++ G+ P+ +++ +LI + A ++L
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS 563
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+R G++PDV++Y T I C +A L +EM I+P+ TY L + G
Sbjct: 564 LRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGR 623
Query: 634 LHEVQQCLAVYQDM 647
+HE++ +YQ M
Sbjct: 624 VHEMEN---LYQQM 634
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 170/409 (41%), Gaps = 59/409 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYV 293
D + L ++ S K Y C +++ G+C D S+A + + L + + +
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLN--GLCKDGKISKAEEVLQTLVNSGLLQTTVI 365
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+N DL+ +++ M+ + D +YN L+ G E + V
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL---GKVERITEAHDLVI 422
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+E GV V T++T++ + A + + DM G+ PN +++ S++NA
Sbjct: 423 EMEKNGV-NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G + +A+ + ++M P +Q N ++ A +E D+AF L
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML---------------- 525
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDY 529
+K + P P+ TYN+L+K C +
Sbjct: 526 -------------AEKMKSSGVP------------------PSIVTYNLLIKGLCKQSQI 554
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L++ +R GL+P+ IS+ LI AC N + AL++ K M + G+ P Y
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ R+ + +L+++M + P Y ++ A ++ G +V+
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVE 663
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 168/400 (42%), Gaps = 34/400 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN + +I G + +++++ + V N +N++++ + DL+
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + G+ ++ +YN+LL C AG + E+ A + D FTYS +
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM----ASRKMVPDGFTYSILF 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q L + E+ + GV T S L+N G + +A + + ++ +G
Sbjct: 301 DGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLL 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ N L+ + + AF +F +S + + Y+ + + +E
Sbjct: 361 QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHIT----YNALINGLGKVER--- 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRT 541
IT + V ++ P+ T+N L+ A Y R L +++M+
Sbjct: 414 --ITEAHDLVIEM------EKNGVNPSVETFNTLIDA----YGRAGQLEKCFIILSDMQE 461
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL PN +S+ +++A +G + A+ IL M + P Y I + Q
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQ 521
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
AF L E+MK + P++VTY L++ + + E ++ L
Sbjct: 522 AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELL 561
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 133/334 (39%), Gaps = 32/334 (9%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + + + DL A + K L P+ +I+ G ++ + +
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V ++ FN+L++ A L+ + +MQ+ G+ ++ SY ++ A C G
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A I + + K VL Y+ I+ + + A + E M S+GV P+ +
Sbjct: 484 ILEAVAI---LDDMFIKDVLP-GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIV 539
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS- 458
T++ LI + +A L + + G P+ N L+ AC DRA L +
Sbjct: 540 TYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEM 599
Query: 459 WTLS-----KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
W +T L G R+ ME N + DK P
Sbjct: 600 WKCGIKPSPRTYRMLFSSL-GGAGRVHEME---------------NLYQQMLDK--DVVP 641
Query: 514 TTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ YNI++ A C + +V+AL EM G++
Sbjct: 642 CSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +W + AC +G+++ A+ +L+ M DG +P+ +Y I ++ A
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
LF+EM + PN +TY T++ + G L
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLE 240
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 56/387 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 185 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 244
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 245 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 300
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 361 TVMTAYANVGRVDEALALF--------------------DRM------------------ 382
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 383 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
P L TY LL SR G Q ++
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVS 520
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 315
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 316 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 374
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 375 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 434
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T ++ M+ + +T N + +++ + ++FK
Sbjct: 435 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 630 RYG 632
+ G
Sbjct: 613 KNG 615
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 31/420 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 469
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALG------EDYDGNT 476
N Q ++LLQ A +E+ + + +F SW + +T V E +
Sbjct: 530 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAF 589
Query: 477 DRISNMEHKDKQSITNT--PNFVPNSHYSS----FD--KRFSFKPTTTTYNILMK--ACC 526
+ +K I N+ + N YS FD K+ P TYN LM A
Sbjct: 590 QEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKS 649
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV Y
Sbjct: 650 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 709
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + + +A + M H+ ++P +TY ++ + + E ++ L+ D
Sbjct: 710 HTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEG 566
R + TT + L +A Y R L E+R G+ P +++ +++D G G +
Sbjct: 177 RLDVRAYTTVLHALSRA--GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ +L+ MR G+ PD +T I C R L QA + FE++K P +VTY LL+
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294
Query: 627 ARSRYGSLHEVQQCLAVYQD 646
+ G+ E + L +D
Sbjct: 295 VFGKAGNYTEALRVLKEMED 314
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 560 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 679 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 734
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 735 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 792
Query: 451 R 451
R
Sbjct: 793 R 793
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 149 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 208
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P +VTY +L R G + +A+ ++M AG
Sbjct: 209 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAG 246
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 41/441 (9%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTL 289
G RDL+ ++ S+ L + N Y I V G C ++K A +L +QN L
Sbjct: 259 LGDARDLLMDMK----SRGLLPNRNTYN----ILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 290 -NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+N N ++ ++ M+ L ++ D+ SYN L+ C L + + E
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC-LEWSKI--SEA 367
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + KGV K + T++ +VK + A M +G +P+ +T+++LIN
Sbjct: 368 FKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
AG + +A +EM + + +S N +L+ + + A++L S
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 460 -TLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNF-----------VPNSHYSSF 505
+S + +G DGN DR + E K+K+ I +T + S
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 506 DKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++ P TTYN ++ C D + N+M P+ + IL+
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E AL++ G + D V Y T I + RL AF+L EM+ ++ P+ TY
Sbjct: 607 GMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
++ A + G + E ++ ++
Sbjct: 667 NAIITALTDSGRIREAEEFMS 687
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 107/528 (20%), Positives = 203/528 (38%), Gaps = 110/528 (20%)
Query: 229 REFGKKRDLVSALRAYDASKKH--------LSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
R+F + L+ A D ++H L+SP+ + T I G + I++
Sbjct: 102 RKFSDAKSLLLGFIATD--RRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFK 159
Query: 281 DLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N+ N+L+N ++H + F+ E + + KLG++ ++ ++NI++ C
Sbjct: 160 KMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYC 219
Query: 336 LAG------------------------NTVL----AQEIYGEVKHL----EAKGVLKLDV 363
L NT+L + G+ + L +++G+L +
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLP-NR 278
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ +V + W + A V E M + P+ T++ LIN N G +E+A L +E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGE 470
M P+ N L+ C+E + AF+L + + K G+
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFDK--RFSFKPTTTTYN 519
D ++ I+ ME T N + N + + + D+ R + K + T N
Sbjct: 399 -MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 520 ILMKACCTD-------------------------------YY------RVKALMNEMRTV 542
+++ C + Y+ R L +EM+
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ +++ +I G E A+ L + E G+ PD Y T + R +++A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
F +M +P++ T LLR G L + + + KA
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKA 625
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 156/401 (38%), Gaps = 80/401 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SP+ T+I+ G+ ++ +++ +N+ ++ N+++ + K E Y
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE-EAY 473
Query: 313 K---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K + +K G D SY L+ GN A +++ E+K E + TY+ I
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE----IIPSTVTYNCI 529
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A+ ++L +G+ P+ T++++++ G VE+A +M++
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ CNILL+ ++A +LF +W V+ G+ D
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTW------VSKGKAID---------------- 627
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
T TYN L+ + C + A L++EM L P+
Sbjct: 628 -------------------------TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSP-----------------------DVV 584
H ++ +I A SG + A + + M E G P V
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSV 722
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AY+ IK + K A +F E K I + TYI L+
Sbjct: 723 AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
SP TAI V+S + AF +F++MK +++PNL+T TLL + RY S H V
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 640 CLAVYQDMWKAG 651
+ D K G
Sbjct: 192 SREAFNDAIKLG 203
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 56/387 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 185 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 244
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 245 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 300
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 361 TVMTAYANVGRVDEALALF--------------------DRM------------------ 382
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 383 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
P L TY LL SR G Q ++
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVS 520
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 195/423 (46%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 315
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 316 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 374
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 375 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 434
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFDKRFS--F 511
+ EDY T ++ M+ + +T N + +++ + +D+ S F
Sbjct: 435 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 630 RYG 632
+ G
Sbjct: 613 KNG 615
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 31/420 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 469
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALG------EDYDGNT 476
N Q ++LLQ A +E+ + + +F SW + +T V E +
Sbjct: 530 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAF 589
Query: 477 DRISNMEHKDKQSITNT--PNFVPNSHYSS----FD--KRFSFKPTTTTYNILMK--ACC 526
+ +K I N+ + N YS FD K+ P TYN LM A
Sbjct: 590 QEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKS 649
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV Y
Sbjct: 650 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 709
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + + +A + M H+ ++P +TY ++ + + E ++ L+ D
Sbjct: 710 HTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEG 566
R + TT + L +A Y R L E+R G+ P +++ +++D G G +
Sbjct: 177 RLDVRAYTTVLHALSRA--GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ +L+ MR G+ PD +T I C R L QA + FE++K P +VTY LL+
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294
Query: 627 ARSRYGSLHEVQQCLAVYQD 646
+ G+ E + L +D
Sbjct: 295 VFGKAGNYTEALRVLKEMED 314
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 560 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 679 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 734
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 735 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 792
Query: 451 R 451
R
Sbjct: 793 R 793
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 149 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 208
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P +VTY +L R G + +A+ ++M AG
Sbjct: 209 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAG 246
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 449
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 171/409 (41%), Gaps = 40/409 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 129 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
Y++++ AGN A++++ + KGV + V TY++++ ++ K+
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFS---SMVGKGVPQSTV-TYNSLMSFETS---YKEVSKI 301
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M + + P+ ++++ LI A A E+A+ +FEEML AG P + NILL A
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT-PNFVPNSHYSS 504
+ ++A +F+S DRI D S T +V S
Sbjct: 362 SGMVEQAKTVFKSM---------------RRDRI----FPDLWSYTTMLSAYVNASDMEG 402
Query: 505 FDKRF------SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+K F F+P TY L+K A D ++ + +MR G+ N T ++D
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
A G N AL K M G+ PD A + + L++A L
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 162/397 (40%), Gaps = 64/397 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLG 319
+I G G++ + + L T N+ + +LM K +++ MQ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ E E K LK D Y ++ ++ A +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVF-ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV M+ GV +T+T++SL++ + ++ ++++M ++ +P+ +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++A A + + A +F E D
Sbjct: 321 IKAYGRARREEEALSVFE------------EMLDAGV----------------------- 345
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + MR + P+ S+T ++ A
Sbjct: 346 ------------RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + K ++ DG P++V Y T IK ++ +++ ++E+M+ I+ N
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 618 LVTYITLLRARSR---YGSLHEVQQCLAVYQDMWKAG 651
T++ A R +GS L Y++M G
Sbjct: 454 QTILTTIMDASGRCKNFGS------ALGWYKEMESCG 484
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ +P+ +TY +L+ E ++ D
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 178/436 (40%), Gaps = 62/436 (14%)
Query: 261 TIIDVCGICGDYMKSR--------AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLE 310
+II+ I G +KS ++ L +T +I+ FN L+N H ++ F
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + K+G D ++N L+K CL G A + H+ A G LD F+Y T++
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFH---DHVLALG-FHLDQFSYGTLI 180
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ + V N + ++++I++ LV A L+ +M+
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY------------DGNTDR 478
P+ + L+ Q + AF LFR L + DY +GN
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN----INPDYYTFNILVDALCKEGNLKG 296
Query: 479 ISNM-----------------EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
NM D + N N H + + P +Y +
Sbjct: 297 AKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN--KAKHVLNTISQMGAAPNAHSYCTM 354
Query: 522 MKACCTDYYRVK------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ C ++K +L N+M+ G++P+ +++ LID SG + A +++ M
Sbjct: 355 INGFC----KIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMH 410
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
++G ++ Y I ++ + QA +L +++K IQP++ T+ L+ + G L
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470
Query: 636 EVQQCLAVYQDMWKAG 651
Q V+QD+ G
Sbjct: 471 NAQD---VFQDLLSKG 483
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 154/396 (38%), Gaps = 63/396 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K + ++ A Y SP++ +I I G ++ ++ +
Sbjct: 209 VMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ + Y FN L++ +LK + M K GVM ++ +Y+ L+ CL
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ + + + A + +Y T++ F K AL + DM G+ P+ +
Sbjct: 329 VNKAKHVLNTISQMGAAP----NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI+ +G + A L +EM G N N L+ A + D+A L +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KD+ +P T+N
Sbjct: 445 -------------------------KDQ----------------------GIQPDMYTFN 457
Query: 520 ILMKACCTDYYRVKALMN------EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
IL+ C +V L N ++ + G S N ++ I+++ G + A +L
Sbjct: 458 ILIYGLC----KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M ++G+ PD V Y T I+ ++A L EM
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 205/475 (43%), Gaps = 113/475 (23%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ R+I + + NV NI N L+ + DL+ L + K K G+ + +Y LL
Sbjct: 154 RVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRLVK---KWGLKMNSFTYKCLL 210
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV----------KVFADAKW--- 378
+A + ++ A ++Y E++ +G KLD+F Y+ ++ +VF D K
Sbjct: 211 QAYLRSRDSSKAFDVYCEIR----RGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC 266
Query: 379 -------------------WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ A+ + +M++ G+T N + +++L+ A +V++A+
Sbjct: 267 RRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDR---------------------------- 451
+F M++ GC PN +++L V Q R
Sbjct: 327 VFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 452 ----AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISNMEH----KDKQSITNTPNFV 497
A RLF W+ + +++ E G I +E +K +T+T +
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY- 445
Query: 498 PNSHYSS-------------FDKRFSFKPTTT--TYNILMKACCTDYYRVKA------LM 536
N+ +S+ F+K P+ TYNIL+ + + RV +
Sbjct: 446 -NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISS----FGRVGEVDEAINIF 500
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
E+ P+ IS+ LI+ G +G+V+ A K M+E G++PDVV Y+T ++ ++
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+R++ A+SLFEEM QPN+VTY LL + G E + +Y M + G
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAE---AVDLYTKMKQQG 612
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 180/457 (39%), Gaps = 67/457 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
FG DL LR KK N + + ++ D K+ +Y ++R L+
Sbjct: 181 FGDTEDLQMCLRLV---KKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLD 237
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
I+ +N L++ A D K +V+++M+K D SY I+++ G E G
Sbjct: 238 IFAYNMLLDALAKDEK-ACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGK---YDEAVGLF 293
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS-------- 402
+ +G L L+V Y+T+++V A K A++V M+ G PN T+S
Sbjct: 294 NEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVA 352
Query: 403 ------------------------SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
L+ + G V +A LF +M +
Sbjct: 353 EGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNMEHKDKQSITN 492
+L++ A + A + S K V Y+ G +IS++ ++ +
Sbjct: 413 MLESLCGAGKTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 493 TPN---FVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACCT--DYYRV 532
P+ F N SSF + R KP +YN L+ D
Sbjct: 472 GPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
EM+ GL+P+ ++++ L++ G + VE A + + M G P++V Y +
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+S R +A L+ +MK + P+ +TY L R +S
Sbjct: 592 LEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLERLQS 628
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 140/324 (43%), Gaps = 47/324 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF-----NSLMNVN-AHDLKF 307
PN Y ++++ G ++ I E + + +T IY + + L +V+ AH L
Sbjct: 338 PNEYTYSLVLNLLVAEGQLVRLDGIVE-ISKRYMTQGIYSYLVRTLSKLGHVSEAHRL-- 394
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ +M V + SY +L++ C AG T+ A E+ ++ KGV+ D Y+
Sbjct: 395 ----FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE---KGVVT-DTMMYN 446
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+ K + E M G +P+ T++ LI++ G V++A+++FEE+ ++
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERS 506
Query: 428 GCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYD--GNTDRISNM 482
C+P+ N L+ + D A F+ + L+ V + G T+R+
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE-- 564
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKA---LMN 537
YS F++ +P TYNIL+ C R L
Sbjct: 565 -----------------MAYSLFEEMLVKGCQPNIVTYNILLD-CLEKSGRTAEAVDLYT 606
Query: 538 EMRTVGLSPNHISWTILIDACGGS 561
+M+ GL+P+ I++T+L GS
Sbjct: 607 KMKQQGLTPDSITYTVLERLQSGS 630
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 55/354 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 708 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 768 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 880
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 881 VGDAF--------------------------------------------TYNTLIHGYCQ 896
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 897 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 956
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E +
Sbjct: 957 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 142/354 (40%), Gaps = 55/354 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ V+N+L++ +L LE+ M+K G+ AD+ +YN LL C +G A +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + DV T++ ++ VF A ++ ++M+ + V PN +T++S+IN
Sbjct: 235 RDM----MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A F+ M GC PN N L+ + D +LF+ +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE----- 345
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC- 526
F TYN L+ C
Sbjct: 346 ------------------------------------------GFNADIFTYNTLIHGYCQ 363
Query: 527 TDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
RV + M + ++P+ I+ IL+ +G +E AL MRE +VA
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y I ++ ++++A+ LF + ++P+ TY ++ + G E +
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 37/373 (9%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 667 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 723 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 782 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 624 LLRARSRYGSLHE 636
+++ R L E
Sbjct: 960 IIQGLCRTDKLKE 972
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 664 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 716
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 717 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 773
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 774 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 832
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 833 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 885
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 138/346 (39%), Gaps = 63/346 (18%)
Query: 290 NIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+I F SL++ VN F+L + M K G ++ YN L+ C G +A E
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVIL--MVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ E +E KG L DV TY+T++ + W A ++ DM+ + P+ +T+++LI
Sbjct: 198 LLNE---MEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ G +++A L++EM+Q+ +PN+ N ++ C R + +++ L ++
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING---LCMHGRLYDAKKTFDLMASK 310
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
P TYN L+
Sbjct: 311 GCF--------------------------------------------PNVVTYNTLISGF 326
Query: 526 CTDYYRV----KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C +R+ L M G + + ++ LI G + AL I M ++P
Sbjct: 327 CK--FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D++ + + + ++ A F++M+ + +V Y ++
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++P YN L+ C + AL +NEM GL + +++ L+ SG A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L+ M + ++PDVV +T I V V+ L +A L++EM + PN VTY +++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 628 RSRYGSLHEVQQ 639
+G L++ ++
Sbjct: 291 LCMHGRLYDAKK 302
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 508 RFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ ++P+ T+ L+ C D + + LM + G PN + + LID +G
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK---SGYEPNVVVYNTLIDGLCKNG 190
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL++L M + G+ DVV Y T + S R A + +M I P++VT+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L+ + G+L E Q+ +Y++M ++
Sbjct: 251 ALIDVFVKQGNLDEAQE---LYKEMIQS 275
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ D LR D K+ ++ P++ +IDV G+ +++ +Y+++ +V N
Sbjct: 225 GRWSDAARMLR--DMMKRSIN-PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 292 YVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+NS++N +D K T ++ M G ++ +YN L+ C + E
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFC---KFRMVDEG 335
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + +G D+FTY+T++ + ++AL + M+S VTP+ IT L++
Sbjct: 336 MKLFQRMSCEG-FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +E A+ F++M ++ NI++ +A + ++A+ LF
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P+ T L+ C + +L++ M G PN + + +I+ + ++
Sbjct: 667 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 726
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M + G+ D V Y T I S R A L +M +I PN++ + L+
Sbjct: 727 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786
Query: 626 RARSRYGSLHEVQQCLAVYQDMWK 649
+ G+L E + +Y++M +
Sbjct: 787 DTFVKEGNLLEARN---LYKEMIR 807
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F K+ +L+ A Y + PN++ ++I+ I G ++ +++
Sbjct: 780 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 839
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ ++ +N+L+ + ++ ++++ M G++ D +YN L+ C AG
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+AQ+++ + + D+ TY+ ++ + + AL + ED+ + + + I
Sbjct: 900 LNVAQKVFNRM----VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 955
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
T++ +I +++A LF + + G +P++
Sbjct: 956 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 989
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F F P YN ++ C D + M G+ + +++ LI SG
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + + P+V+ +T I V+ L +A +L++EM + PN+ TY +L+
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 627 ARSRYGSLHEVQ 638
+G L + +
Sbjct: 823 GFCIHGCLGDAK 834
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/456 (19%), Positives = 180/456 (39%), Gaps = 54/456 (11%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVF 294
L A + +D PN+ T+I G C M + +++ + + +I+ +
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLIS--GFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L++ L+ L+++ M V D+ ++ ILL C+ G A + +++
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 353 LEAK-GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E G++ ++ + + K K W++ ++ + GV P+ T++ +I
Sbjct: 415 SEKYIGIVAYNIMIHG-LCKADKVEKAWELFCRLPVE----GVKPDARTYTIMILGLCKN 469
Query: 412 GLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---- 465
G +A L M + G C+ N++ ++ + + + + L W SK+
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAEDDHLEEHS---SSNKEISLSLREIWERSKSNPFWM 526
Query: 466 -----VALGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+A G R +E + + + +F SH+ + +R + ++
Sbjct: 527 QRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFD 586
Query: 520 ILMKACC-----------TDYYRVKA-------------LMNEMRTVGLSPNHISWTILI 555
C D+ RV L ++M +G+S + S+TILI
Sbjct: 587 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ AL +L M + G P +V + + + R ++A SL + M +
Sbjct: 647 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 706
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN+V Y T++ + ++ L V+ M K G
Sbjct: 707 PNVVIYNTVINGLCKN---RDLNNALEVFYCMEKKG 739
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ + L+ A Y V +M G+S + S+TILI + AL +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + + R+ AFSL M +PN+V Y TL+ +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G E+ L + +M K G
Sbjct: 189 NG---ELNIALELLNEMEKKG 206
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+++ +M +G P+ +++ L+ + A ++ +M + G P+VV Y T I
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
++ L A L EM+ + ++VTY TLL G + + L +DM K
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML---RDMMK 239
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 180/476 (37%), Gaps = 100/476 (21%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG------- 270
+ D++ C ++ F R++ A R +KH P+++ +I G C
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMGILEKH-GKPDVFAYNAVIS--GFCKANRIESA 63
Query: 271 ----DYMKSRAIYEDLRSQNVTLNIY-----------VFNSLMNVN-------------- 301
D MK + D+ + N+ + + VF L+ N
Sbjct: 64 KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123
Query: 302 ----AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L++ M G+ D +YN++ + C G A E V+ L ++G
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEF---VRTLNSRG 180
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
K DV TY+ +++ + W K ++ S G PN +T+S LI++ G +E++
Sbjct: 181 C-KPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
++L + M + G P++ C + L+ A + D A DG
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMIC-----------DG--- 285
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--L 535
F P YN +M A C + A +
Sbjct: 286 ---------------------------------FLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++ VG PN S+ ++ A SG+ AL ++ M G+ PDV+ Y + I R
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A L +M + QPN+V+Y T+L + H + + V M + G
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCK---AHRIDDAIEVLAAMIENG 425
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 44/377 (11%)
Query: 116 VASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-FKLLKNECQRLL 166
V SG K+ RI+ VL ++ G +P + F G G L + LL
Sbjct: 50 VISGFCKA---NRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106
Query: 167 DSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK---PDV---NLAIRYACIVPRA 220
+ + +L E + +DE +++ +++ PD N+ R C +
Sbjct: 107 KDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166
Query: 221 DILFCNFVREF---GKKRDLVS---ALRA------YDASKKHLSS-------PNMYICRT 261
D F FVR G K D+++ LRA +D +K +S PN+
Sbjct: 167 DRAF-EFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLG 319
+I G +S + + ++ + +T + Y ++ L+ + L +E M G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D+ +YN ++ A C GN A EI+G++ + +V +Y+T++ +
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPP----NVSSYNTMLSALWSSGDR 341
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
AL + MLS G+ P+ IT++SLI+ G+V++A+ L +ML +PN +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 440 LQACVEACQFDRAFRLF 456
L +A + D A +
Sbjct: 402 LLGLCKAHRIDDAIEVL 418
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I+ L N+ +N++++ ++ D L + M G+ D+ +YN L+ C
Sbjct: 312 IFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G + E G + + G + ++ +Y T++ A A++V M+ G
Sbjct: 372 RDG---MVDEAIGLLADM-LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQ 427
Query: 396 PNTITWSSLINACANAGLVEQAMHL 420
PN T++ LI +G QAM L
Sbjct: 428 PNETTYTLLIEGIGFSGSRTQAMEL 452
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 57/429 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ ++ + +D+ + ++N+ V SLM +L+ L + + +
Sbjct: 115 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 174
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ + +Y++L+ CC GN A E Y E+K KG+ + V++ ++I++ + +
Sbjct: 175 GLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK---TKGI-RSSVYSLNSILEGYLKCQS 230
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCN 437
WQ A + D L +G+ N T+++L++ G + +A +L++E++ G PN N
Sbjct: 231 WQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289
Query: 438 ILLQACVE-----ACQFDRAF--RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
I+L C + AC+ + F ++ T + G G+ + ++ H+ K +
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA- 348
Query: 491 TNTPNFVPNSHY------------SSFDKR--------FSFKPTTTTYNILMKA------ 524
N +P SF+ R F PT YN ++
Sbjct: 349 ----NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 525 --CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++ YR EM VG++P+ +++T LID N++ AL++L M+ G+ D
Sbjct: 405 INLASNVYR------EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 458
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ AY T I + + +K A L E++ + PN Y +++ + +++ V++ +
Sbjct: 459 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG---FKNMNNVEEAID 515
Query: 643 VYQDMWKAG 651
+Y+ M G
Sbjct: 516 LYKKMVNEG 524
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 202/485 (41%), Gaps = 53/485 (10%)
Query: 197 IVQLCVNKPDVNLAIRYACIVPRADILFC----------NFVREFGKKRDLVSALRAYDA 246
++ CV + +V A+R + D++ C + ++ + + +L SAL +
Sbjct: 116 VITACVKEGNVAEALRL-----KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 170
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+ PN +ID C G+ K+ Y +++++ + ++Y NS++ +
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ ++ + + G +A++ ++N LL C G A ++ EV AKG+ +V
Sbjct: 231 WQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI---AKGI-SPNVV 285
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ I+ A KV ++ML G TPN +T++ L++ G +E A +F M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNT 476
A P I+++ +A + LF + + + G +GN
Sbjct: 346 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 405
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFD------------------KRFSFKPTTTTY 518
+ SN+ +++ + TP+ V ++ S D KR K Y
Sbjct: 406 NLASNV-YREMCEVGITPSTV--TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C D L+NE+R GLSPN + +I NVE A+ + K M
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G+ D+ YT+ I ++S RL A + EM I P+ + L+ G
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582
Query: 637 VQQCL 641
++ L
Sbjct: 583 ARKIL 587
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 154/365 (42%), Gaps = 56/365 (15%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ M +GV D + +++L+AC GN + A++ + + K A+GV +LD YS
Sbjct: 26 ELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAK---ARGV-ELDQEAYSIF 81
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML---- 425
V + AL + +M +AG P T++S+I AC G V +A+ L ++M+
Sbjct: 82 VHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGK 141
Query: 426 -------------------------------QAGCEPNSQCCNILLQACVEACQFDRAFR 454
++G PN ++L+ C + ++AF
Sbjct: 142 SMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFE 201
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKP 513
+ KT+ Y N S +E K QS N ++ S F
Sbjct: 202 FYSEM---KTKGIRSSVYSLN----SILEGYLKCQSWQNAFTMFNDALESGLANVF---- 250
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N L+ C + +A L +E+ G+SPN +S+ +I N+ A ++
Sbjct: 251 ---TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K M ++G +P+ V +T + + ++ AFS+F MK I P T +++ +
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 367
Query: 632 GSLHE 636
G E
Sbjct: 368 GRSFE 372
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 151/358 (42%), Gaps = 22/358 (6%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ T N F LM+ D++ ++ M+ ++ + I++K C
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG + ++++ + ++G + Y+TI+ F +A V +M G+T
Sbjct: 366 KAGRSFEGRDLFNK---FVSQGFVP-TCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++SLI+ ++ A+ L +M + G + + + L+ + A L
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481
Query: 456 F---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R LS + G + ++N+E +P K
Sbjct: 482 LNELRGAGLSPNRFIYNSMITGFKN-MNNVEEAIDLYKKMVNEGIP----------CDLK 530
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+ + L+K+ Y + EM + G+ P+ + T+LI+ G E A +IL+
Sbjct: 531 TYTSLIDGLLKSGRLLY--ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 588
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M M P V+ Y T I + L++AF L +EM + P+ +TY L+ + +
Sbjct: 589 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 126/256 (49%), Gaps = 17/256 (6%)
Query: 197 IVQLCVNKPDVNLA---IRYAC---IVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
I+ + + ++NLA R C I P + + + + + F K ++ AL+ + K+
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITP-STVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453
Query: 251 LSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
++ T+ID G C D + + +LR ++ N +++NS++ N ++++
Sbjct: 454 GLKMDIKAYGTLID--GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+++YK M G+ D+ +Y L+ +G + A +I+ E + +KG+L D +
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE---MLSKGILP-DDRAH 567
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ + ++ A K+ EDM + P+ + +++LI G +++A L +EML
Sbjct: 568 TVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 627
Query: 427 AGCEPNSQCCNILLQA 442
G P++ +IL+
Sbjct: 628 RGLVPDNITYDILVNG 643
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 171/374 (45%), Gaps = 30/374 (8%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMASY 327
D MKS +Y ++ VT NI+ N+++N + ++ L V K +Q G+ D +Y
Sbjct: 186 DEMKS--VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA-GLSLDTFTY 242
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ C N A I+ + + KG L+ +V +Y+ ++ F +A+ ALK+
Sbjct: 243 TSLILGYCRNKNVDAANAIFLSMPN---KGCLRNEV-SYTNLIHGFCEARRVDEALKLFS 298
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M P T++ +I A G +A+++F+EM + C+PN +L+ + E
Sbjct: 299 QMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDS 358
Query: 448 QFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
FD A ++ L + V DG + + + S+ + N PN+
Sbjct: 359 NFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNAR--- 415
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
TYN L+ C + ++ +L+++M L PN +++ ILI G
Sbjct: 416 ------------TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++L +M E G+ PD Y+ I + +++A SLFE +K I+ N V Y
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523
Query: 623 TLLRARSRYGSLHE 636
TL+ + G + +
Sbjct: 524 TLIDGYCKVGKVSD 537
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 53/338 (15%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VY M V ++ + N ++ C GN V A+ ++ + L LD FTY++++
Sbjct: 191 VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKI----VQAGLSLDTFTYTSLI 246
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ K A + M + G N +++++LI+ A V++A+ LF +M + C
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P + +++ A + + A +F+ T Q
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQ------------------------- 341
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
PN H TY +L+ + C D + K ++N M GL P+
Sbjct: 342 -------PNVH---------------TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSV 379
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LID G AL+IL +M + SP+ Y I R K + +A SL +
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M ++QPN+VTY L+ + + G L + L++ +
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNE 477
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 37/364 (10%)
Query: 244 YDASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
+D +KK L+ P++ +ID G C + + A I + S N + N +
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALID--GYCKKGLSASALEILSLMESNNCSPNARTY 417
Query: 295 NSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N L+ ++ + + M + + ++ +YNIL+ C G+ A Y +
Sbjct: 418 NELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA---YKLLSL 474
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ G++ D +TYS + + A + E + G+ N + +S+LI+ G
Sbjct: 475 MNESGLVP-DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
V L ++ML AGC PNS N L+ + F A RL + + + Y
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTY 592
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--KPTTTTYNILMKACCTDYY 530
T I N+ D+ + + FD+ S P Y + A C+ +
Sbjct: 593 ---TILIDNLLKDDEF----------DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS-HG 638
Query: 531 RVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K L+ +M G+ P+ + +T+ IDA G G+++GA ILK M E G P Y+
Sbjct: 639 RLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYS 698
Query: 588 TAIK 591
IK
Sbjct: 699 CLIK 702
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 165/425 (38%), Gaps = 30/425 (7%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
R ++ + N + F + R + AL+ + + P + II G ++ +
Sbjct: 272 RNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNM 331
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
++++ ++ N++ + L+ D F ++ M + G++ + +YN L+ C
Sbjct: 332 FKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCK 391
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G + A EI L + TY+ ++ F K A+ + ML + P
Sbjct: 392 KGLSASALEILS----LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP 447
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +T++ LI+ G + A L M ++G P+ ++ + + + A LF
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507
Query: 457 RSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK- 512
S + +V DG K + F+ DK S
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYC----------KVGKVSDGRFL-------LDKMLSAGC 550
Query: 513 -PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P + TYN L+ C + + + L++ M + P ++TILID + A
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G PDV YT I RLK A L +M I P+ + Y + A
Sbjct: 611 MFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYG 670
Query: 630 RYGSL 634
R+GS+
Sbjct: 671 RFGSI 675
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 43/362 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTY 366
L+++ M + + +Y +++ A C G A ++ E+ KH + +V TY
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQP------NVHTY 347
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ + + A K+ ML G+ P+ +T+++LI+ GL A+ + M
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDR 478
C PN++ N L+ +A L K Q + G+ +G+
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467
Query: 479 ISNMEHKDKQSITNTPNFVPNS-HYSSFD-------------------KRFSFKPTTTTY 518
+ S+ N VP+ YS F K K Y
Sbjct: 468 AYKL-----LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ L+ C + L+++M + G PN I++ LID N + A ++ IM +
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ P YT I ++ QA +F++M P++ Y + A +G L +
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 637 VQ 638
+
Sbjct: 643 AE 644
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 192/435 (44%), Gaps = 36/435 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASK----KHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
FC V+ G++ S RA++ + +H SPN + TI+ V G + ++
Sbjct: 190 FCFVVKSVGQE----SWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVF 245
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLA 337
+V + V+N++M V A KF E++ M++ G D+ S+N L+ A A
Sbjct: 246 TRAEP-SVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKA 304
Query: 338 GNTV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G LA E+ EV+ + L+ D+ TY+T++ + A + A+ V +DM++
Sbjct: 305 GEMTPNLAIELLTEVR----RSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCE 360
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++++I+ GL +A LF ++ G P++ N L A F R +
Sbjct: 361 PDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYA------FAREGNV 414
Query: 456 FRSWTLSKTQVALGEDYDGNT-DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ + + V +G D T + + +M K Q N + Y K P
Sbjct: 415 EKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQ------NDLALQLYRDM-KSSGRNPD 467
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY +L+ + +M+EM G+ P +++ LI +G A +
Sbjct: 468 VITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFD 527
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M G PD +AY+ + + +R K+A + ++EM H I P Y +LR G
Sbjct: 528 CMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRT---LG 584
Query: 633 SLHEVQQCLAVYQDM 647
+ ++V+ V +DM
Sbjct: 585 NANKVEDIGRVVRDM 599
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 164/385 (42%), Gaps = 38/385 (9%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCL 336
Y + R T + +F +L+ + FT +V+ +M+ G+ A Y ++ C
Sbjct: 697 YSNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCK 756
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A + + E G + ++ Y +++ + K WQ A V +M + +T
Sbjct: 757 MGFPETAHHL---IDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITV 813
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N W++LI A A +G E+A +F M++ G P N LLQA + + + + +
Sbjct: 814 NRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVV 873
Query: 457 R-----SWTLSKTQVALGED---YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ + +SK+ + L D GN + + H K + + P+ H
Sbjct: 874 QELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA-----GYFPSMHL------ 922
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
Y ++ + C V+A+++EM G P+ W ++ +
Sbjct: 923 ---------YRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRK 973
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
QI + ++EDG+ PD Y I + R R K+ L +EM+ ++P L TY +L+
Sbjct: 974 TTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLV- 1032
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +G V+Q +++++ G
Sbjct: 1033 --ASFGKQQLVEQAEELFEELQSTG 1055
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 11/257 (4%)
Query: 208 NLAIRYACIVPRA----DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTI 262
NLAI V R+ DI+ N + + +L A+ +D H P+++ +
Sbjct: 310 NLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAM 369
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGV 320
I V G CG K+ ++ DL S+ + +NS + A + ++ ++ + M K+G
Sbjct: 370 ISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGF 429
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +YN ++ G LA ++Y ++K DV TY+ ++ +
Sbjct: 430 GKDEMTYNTMIHMYGKQGQNDLALQLYRDMK----SSGRNPDVITYTVLIDSLGKTNKIE 485
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A + +ML+ GV P T+S+LI A AG +A F+ ML++G P+ +++L
Sbjct: 486 EAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVML 545
Query: 441 QACVEACQFDRAFRLFR 457
+ + RA ++
Sbjct: 546 DIHLRFNEPKRAMTFYK 562
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 156/392 (39%), Gaps = 55/392 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N+ + +I+ G + K+ ++ ++R +T+N V+N+L+ A + V+
Sbjct: 779 NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVF 838
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M K G + S N LL+A + G +E+Y V+ L+ G K+ + ++
Sbjct: 839 NTMMKDGPSPTVDSINGLLQALIVDGRL---EELYVVVQELQDIG-FKISKSSILLMLDA 894
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FA A K+ M +AG P+ + + V + EM +AG +P+
Sbjct: 895 FARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPD 954
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N +L+ V F + ++++ RI
Sbjct: 955 LSIWNSVLKMYVAIDDFRKTTQIYQ--------------------RI------------- 981
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
K +P TYNIL+ C D+ + L M+EMRTVGL P +
Sbjct: 982 --------------KEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDT 1027
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L+ + G VE A ++ + ++ G D Y +K+ S +A LF MK
Sbjct: 1028 YKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMK 1087
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++P + T L+ + G E ++ L+
Sbjct: 1088 DEGVEPTIATMHLLMVSYGSSGQPQEAEKVLS 1119
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 137/319 (42%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG 319
++D G+ + + IY +++ ++++Y + + ++ + M++ G
Sbjct: 891 MLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAG 950
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N +LK + +IY +K + L+ D TY+ ++ ++
Sbjct: 951 FKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIK----EDGLEPDEDTYNILIVMYCRDHRP 1006
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L + ++M + G+ P T+ SL+ + LVEQA LFEE+ GC+ + +I+
Sbjct: 1007 KEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIM 1066
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ + +A RLF + + + S+ + ++ + +
Sbjct: 1067 MKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVL-------- 1118
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
S+ D S P ++ + ++ DY + +++ GL P+H WT I A
Sbjct: 1119 SNLKETDANLSTLPYSSVIDAYVRN--GDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAAS 1176
Query: 560 GSGNVEGALQILKIMREDG 578
S + A+ +L +R+ G
Sbjct: 1177 LSQHTSEAILLLNALRDTG 1195
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 117/293 (39%), Gaps = 54/293 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ--AMHL 420
V Y+ ++ V+A + + ++ + M G P+ +++++LINA AG + A+ L
Sbjct: 256 VKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIEL 315
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E+ ++G P+ N L+ AC A + A +F
Sbjct: 316 LTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMV-------------------- 355
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNE 538
+H+ +P TYN ++ C + + L N+
Sbjct: 356 -------------------AHHC--------EPDLWTYNAMISVYGRCGLSGKAEQLFND 388
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G P+ +S+ + A GNVE I + M + G D + Y T I + + +
Sbjct: 389 LESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQ 448
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A L+ +MK P+++TY L+ + G +++++ + +M G
Sbjct: 449 NDLALQLYRDMKSSGRNPDVITYTVLIDS---LGKTNKIEEAAGMMSEMLNTG 498
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 158/384 (41%), Gaps = 32/384 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ I + +T N +V N L N H + L+V M + G D+ +YNI++
Sbjct: 275 QQEIADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G +E G + + +G L D+ T++T++ + AL + + GV
Sbjct: 332 CKNGQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+P+ T++ LINA G A+ LFEEM +GC P+ N L+ + +A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 455 LFR---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSS 504
L + S ++ + DG RI E D Q I+ N F
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 505 FDKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
DK+ +P TYN ++ C D + ++ M G + +
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
P+ +TY + R R G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGG 651
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 186/437 (42%), Gaps = 48/437 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAG 651
++ + L + +DM G
Sbjct: 440 GKLGKALDLLKDMESTG 456
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 204
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 205 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 317
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 365
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 366 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 28/372 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S+ V + F +LM V ++ L V M ++G A + N+L+ C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 263 KLGRV---EDALGYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M+ GC P+ N L+ A + + A L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FD--KRFSF 511
R T+ G D T I + N V + H + F+ K
Sbjct: 379 ARQVTVK------GVSPDVYTFNI----------LINALCKVGDPHLALRLFEEMKNSGC 422
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C+ KAL + +M + G + I++ +ID +E A +
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+S + + + T I + K++ AF L +M +QPN +TY ++L
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYC 542
Query: 630 RYGSLHEVQQCL 641
+ G + + L
Sbjct: 543 KQGDIKKAADIL 554
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 137/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A + M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C + +G + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI---DDAFGLINQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 158/384 (41%), Gaps = 32/384 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ I + +T N +V N L N H + L+V M + G D+ +YNI++
Sbjct: 275 QQEIADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G +E G + + +G L D+ T++T++ + AL + + GV
Sbjct: 332 CKNGQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+P+ T++ LINA G A+ LFEEM +GC P+ N L+ + +A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 455 LFR---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSS 504
L + S ++ + DG RI E D Q I+ N F
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 505 FDKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
DK+ +P TYN ++ C D + ++ M G + +
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
P+ +TY + R R G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGG 651
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 186/437 (42%), Gaps = 48/437 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAG 651
++ + L + +DM G
Sbjct: 440 GKLGKALDLLKDMESTG 456
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIM---L 204
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 205 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 317
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 365
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 366 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 28/372 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S+ V + F +LM V ++ L V M ++G A + N+L+ C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 263 KLGRV---EDALGYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M+ GC P+ N L+ A + + A L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FD--KRFSF 511
R T+ G D T I + N V + H + F+ K
Sbjct: 379 ARQVTVK------GVSPDVYTFNI----------LINALCKVGDPHLALRLFEEMKNSGC 422
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C+ KAL + +M + G + I++ +ID +E A +
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+S + + + T I + K++ AF L +M +QPN +TY ++L
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542
Query: 630 RYGSLHEVQQCL 641
+ G + + L
Sbjct: 543 KQGDIKKAADIL 554
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 158/384 (41%), Gaps = 32/384 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ I + +T N +V N L N H + L+V M + G D+ +YNI++
Sbjct: 275 QQEIADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G +E G + + +G L D+ T++T++ + AL + + GV
Sbjct: 332 CKNGQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+P+ T++ LINA G A+ LFEEM +GC P+ N L+ + +A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 455 LFR---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSS 504
L + S ++ + DG RI E D Q I+ N F
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 505 FDKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
DK+ +P TYN ++ C D + ++ M G + +
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
P+ +TY + R R G
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGG 651
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 186/437 (42%), Gaps = 48/437 (10%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +A+ + +P + II G G + + ++R + + +
Sbjct: 50 EQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKL 109
Query: 292 YVFNSLMNV--------NAHDLKFTLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVL 342
V +S ++ +A DL + +Q L G+ AD YN LL L
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDL-----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ +Y E + A+G+ K DV T++T++K A + A+ + E+M S GV P+ T++
Sbjct: 165 LESVYSE---MGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ G +E A+ + ML+ GC N+L+ C+ R L
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---YCKLGRV-----EDALG 272
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTT 516
Q + + ++ D+I+ + N N H K + P
Sbjct: 273 YIQQEIADGFE--PDQIT------YNTFVN--GLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI++ C + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+SPDV + I + A LFEEMK+ P+ VTY TL+ SL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSL 439
Query: 635 HEVQQCLAVYQDMWKAG 651
++ + L + +DM G
Sbjct: 440 GKLGKALDLLKDMESTG 456
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 34/365 (9%)
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ + V+N L+NV +K VY M G+ D+ ++N L+KA C A A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ + ++GV D T++T+++ F + + AL+VK ML G + +T +
Sbjct: 201 VLM---LEEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNV 256
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LIN G VE A+ ++ + G EP+ N + CQ D + + +
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMD 310
Query: 464 TQVALGEDYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
V G D D T I N + ++ + I N D+ P TT
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITT 358
Query: 518 YNILMKACCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+N L+ A CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M
Sbjct: 359 FNTLIAALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G +PD V Y T I +L +A L ++M+ + +TY T++ + +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 635 HEVQQ 639
E ++
Sbjct: 478 EEAEE 482
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 28/372 (7%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S+ V + F +LM V ++ L V M ++G A + N+L+ C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 263 KLGRV---EDALGYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M+ GC P+ N L+ A + + A L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FD--KRFSF 511
R T+ G D T I + N V + H + F+ K
Sbjct: 379 ARQVTVK------GVSPDVYTFNI----------LINALCKVGDPHLALRLFEEMKNSGC 422
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C+ KAL + +M + G + I++ +ID +E A +
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M G+S + + + T I + K++ AF L +M +QPN +TY ++L
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542
Query: 630 RYGSLHEVQQCL 641
+ G + + L
Sbjct: 543 KQGDIKKAADIL 554
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 503
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 597
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 598 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 526
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 527 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + M G P + N +LQ+ A LFR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 36/336 (10%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D A YN L+ C G A+ + +K + + + DV TY++++ A
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNV---LKMMLERSCVP-DVITYTSLIVGCCQTNALDEA 181
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ E M +G+TP+T+ +++L+N +E+ L EEM++AG EP++ N ++
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGED---YDGNTD---RISNMEHKDKQSITNTPNF 496
E+ +++ A ++ K G D Y+ D ++S M+ ++
Sbjct: 242 LCESGKYEEAGKILEKMIEKKC----GPDVVTYNSLMDGFCKVSKMDEAERL-------- 289
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYRVKALMNEMRTVGLSPNHISW 551
+R + PT TY L+ D YRV M +M G+SP+ +++
Sbjct: 290 ----LEDMVGRRCA--PTVITYTTLIGGFSRADRLADAYRV---MEDMFKAGISPDLVTY 340
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
L+D +G +E A ++L++M E +PDVV Y+ + + ++ A L E M
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
QPNLVT+ T++ + G + E + L + +++
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 164/384 (42%), Gaps = 33/384 (8%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + ED+ + + + +L+ A L V ++M K G+ D+ +YN LL
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG A E+ + + DV TYS +V A + E ML
Sbjct: 345 DGLCKAGKLEEAHELL----EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN +T++++I+ AG V++ + E M + C P+ + L+ C+ +R
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG---YCKANR 457
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRF 509
F +S + + +G S + ++ Q + + T P
Sbjct: 458 MQDAFAILGISPDKASYSSMLEG---LCSTGKVEEAQEVMDLMTKQGCP----------- 503
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
PT++ Y +++ C +AL + M G PN +++ILI+ + VE A
Sbjct: 504 ---PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDA 560
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +L +M E G PDV YT+ I + ++ A+ F+ M+ +P+ + Y L+
Sbjct: 561 INVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISG 620
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G+ V++ + V Q M + G
Sbjct: 621 FCQSGN---VEKAIEVMQLMLEKG 641
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 39/337 (11%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++Y L+ AGN+ + EI E+ DV T++TI+K + AL
Sbjct: 25 STYGALITGFSRAGNSKMVLEIANEMLARR----FSPDVITHNTILKAYCQIGDLDRALS 80
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ +P T+ LI+ +++A L +EM+Q C P++ N L+
Sbjct: 81 HFRGKMWC--SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 445 EACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ + D A + + ++ T + +G D + K K+S
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES------- 191
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTIL 554
P T YN L+ C V L+ EM G P+ S+ +
Sbjct: 192 -------------GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTV 238
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ SG E A +IL+ M E PDVV Y + + + ++ +A L E+M +
Sbjct: 239 VACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRC 298
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P ++TY TL+ SR L + + V +DM+KAG
Sbjct: 299 APTVITYTTLIGGFSRADRLADAYR---VMEDMFKAG 332
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 43/239 (17%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T+ID G C G + + E ++ + T ++ +++L++ A+ ++
Sbjct: 405 PNLVTFNTMID--GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-------------------IYGEV 350
+ LG+ D ASY+ +L+ C G AQE I G +
Sbjct: 463 AI------LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516
Query: 351 KHLE-AKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+E LK+ +++TYS ++ K + A+ V + ML G P+
Sbjct: 517 CDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI+ ++ A F+ M +GCEP+ NIL+ ++ ++A + +
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 60/386 (15%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAH 303
KK+ ++Y T+I G+CG + + +Y+++ V+ ++ V+N+++N + A
Sbjct: 282 KKNERGQDLYTYSTLIH--GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 340 RIEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADS 394
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY +V + AL + E+ + +T +SS+IN G +++ + ++
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + GC+PN CN ++ V A + + A R F NM
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFF-----------------------GNMV 491
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRT 541
K F PT TYN L+ + AL+ EM
Sbjct: 492 SK-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLH 527
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++++L++ ++ AL + E G PDV + I S +++
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRA 627
A L+ EMK + PNLVT+ TL+
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEG 613
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 181/400 (45%), Gaps = 33/400 (8%)
Query: 242 RAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+ +D +K+ L+ SP+++ T+I+ G + +++++ + VT ++ +
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 222
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N L++ D+ E+++ + K V ++ SYN+++ C G + EI+ +K
Sbjct: 223 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 282
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E D++TYST++ + A +V ++M GV+P+ + +++++N A
Sbjct: 283 KNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E+ + L++ M + GC NIL++ E + D A + W L + D
Sbjct: 339 GRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----D 389
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP--TTTTYNILMKACCTD- 528
++ + H N N S ++ + + T Y+ ++ C +
Sbjct: 390 CCADSMTYGVLVH------GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V ++++M G PN +I+ + +E AL+ M G P VV Y
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
T I +++R +A++L +EM H +PN++TY L+
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 152
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 213 RGVTPDVACYNILI---------DGFFK-------------------------------- 231
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 232 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRG 368
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 153/358 (42%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 120 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 174
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 175 MWEQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--- 468
+ A ++E +L+ PN N+++ + +FD +F ++ ++ L
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 469 -----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 354 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV L
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 39/298 (13%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
T++K +A AL + + M G P +++SL+NA + ++A F
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PN Q NIL++ QFD+A L +W + D I+++
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELL-NWMWEQ---GFSPDVFSYGTLINSL---- 194
Query: 487 KQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCTDYYRVKALMNE-- 538
N + S K F P YNIL+ +++ ++N
Sbjct: 195 ----------AKNGYMSDALKLFDEMPERGVTPDVACYNILIDG----FFKKGDILNASE 240
Query: 539 -----MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ + PN S+ ++I+ G + + +I M+++ D+ Y+T I
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S L A +++EM + P++V Y T+L R G +++CL +++ M K G
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG---RIEECLELWKVMEKEG 355
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 169/402 (42%), Gaps = 35/402 (8%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y M + L K G+ +E I + +E + + + + G+ S G +D
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNE----RGQDLYTYSTLIHGLCGS---GNLDGAT 310
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
V K++ E GV+P D + + N L +G +E + L +V+E + + +
Sbjct: 311 RVYKEMAENGVSP----DVVVYNTMLN---GYLRAGRIEECLELWKVME--KEGCRTVVS 361
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRAD-----ILFCNFVREFGKKRDLVSALRAYDASK 248
+++ V+ AI ++P D + + V K L AL + ++
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
+ + ++I+ G+C G + + + + N +V N+++N V A
Sbjct: 422 NGRGDLDTFAYSSMIN--GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L + NM G + +YN L+ A E Y VK + KG K ++
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF---SEAYALVKEMLHKG-WKPNMI 535
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TYS ++ K MAL + L G P+ + +I+ ++G VE A+ L+ EM
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF----RSWTLS 462
Q C PN N L++ + F+RA +++ +SW+ S
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSS 637
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 112 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 171
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 172 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 230
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 231 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 290
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 291 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 350
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G
Sbjct: 351 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 392
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 171/409 (41%), Gaps = 40/409 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 72 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 131
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 132 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 191
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
Y++++ AGN A++++ + KGV + V TY++++ ++ K+
Sbjct: 192 MYHMMIYMYKKAGNYEKARKVFS---SMVGKGVPQSTV-TYNSLMSFETS---YKEVSKI 244
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M + + P+ ++++ LI A A E+A+ +FEEML AG P + NILL A
Sbjct: 245 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 304
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT-PNFVPNSHYSS 504
+ ++A +F+S DRI D S T +V S
Sbjct: 305 SGMVEQAKTVFKSM---------------RRDRI----FPDLWSYTTMLSAYVNASDMEG 345
Query: 505 FDKRF------SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+K F F+P TY L+K A D ++ + +MR G+ N T ++D
Sbjct: 346 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 405
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
A G N AL K M G+ PD A + + L++A L
Sbjct: 406 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 454
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 161/393 (40%), Gaps = 64/393 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLG 319
+I G G++ + + L T N+ + +LM K +++ MQ G
Sbjct: 88 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ E E K LK D Y ++ ++ A +
Sbjct: 148 PEPSAITYQIILKTFVEGDKFKEAEEVF-ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 206
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV M+ GV +T+T++SL++ + ++ ++++M ++ +P+ +L
Sbjct: 207 EKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALL 263
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++A A + + A +F E D
Sbjct: 264 IKAYGRARREEEALSVFE------------EMLDAGV----------------------- 288
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + MR + P+ S+T ++ A
Sbjct: 289 ------------RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 336
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + K ++ DG P++V Y T IK ++ +++ ++E+M+ I+ N
Sbjct: 337 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 396
Query: 618 LVTYITLLRARSR---YGSLHEVQQCLAVYQDM 647
T++ A R +GS L Y++M
Sbjct: 397 QTILTTIMDASGRCKNFGS------ALGWYKEM 423
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 81 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 140
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ +P+ +TY +L+ E ++ D
Sbjct: 141 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 180
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 17/336 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYS 367
L +K Q+ G SY I+L+ N +A+ ++ KH +KG +KL+ ++
Sbjct: 95 LRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKH--SKGTVKLEDRFFN 152
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++++ +A+A ++ ++K+ + M S V+P+ +T++SL++ G A +++EML
Sbjct: 153 SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212
Query: 428 -GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ N+L++ + D FR FR E ++ + D ++ D
Sbjct: 213 YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREM----------ESFNCDADVVTYNTLVD 262
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
N K P TY L++ C +AL + EM + GL
Sbjct: 263 GLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL 322
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN I++ L+ + ++ +L+ M+ D G SPD + T I + + L +A
Sbjct: 323 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+FE MK ++I + +Y TL+R+ + G +Q
Sbjct: 383 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQ 418
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 163/422 (38%), Gaps = 77/422 (18%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVY--------------- 312
G + +S +++ ++S V+ ++ FNSLM++ + + EVY
Sbjct: 162 GLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCT 221
Query: 313 ---------------------KNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEV 350
+ M+ AD+ +YN L+ C AG +A+ + G
Sbjct: 222 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 281
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K E L +V TY+T+++ + + + AL V E+M S G+ PN IT+++L+
Sbjct: 282 KKCEG---LNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCE 338
Query: 411 AGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---------- 459
A +++ + E M G P++ N ++ A D A ++F S
Sbjct: 339 AHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSA 398
Query: 460 ---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
TL ++ G DYD + K+ + S + S KP
Sbjct: 399 SYSTLIRSLCQKG-DYDMAEQLFDELFEKE----------ILLSKFGS-------KPLAA 440
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+YN + ++ C KA ++ ++ G T+++ C G E ++L M
Sbjct: 441 SYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHC-KEGAYESGYELLMWM 499
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
PD+ Y I ++ + A E+M QP T+ ++L G
Sbjct: 500 LRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCA 559
Query: 635 HE 636
HE
Sbjct: 560 HE 561
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 153/395 (38%), Gaps = 79/395 (20%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L FNSL+ A K ++++++ M+ + V + ++N L+ G T +A+
Sbjct: 144 VKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAK 203
Query: 345 EIYGEV------------KHLEAKGVLK--------------------LDVFTYSTIVKV 372
E+Y E+ ++ +G K DV TY+T+V
Sbjct: 204 EVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDG 263
Query: 373 FADAKWWQMALKVKEDMLSA--GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A ++A + M G+ PN +T+++LI VE+A+ + EEM G +
Sbjct: 264 LCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLK 323
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N L++ EA + D+ + K+ D
Sbjct: 324 PNMITYNTLVKGLCEAHKLDKMKDVLERM---KSDGGFSPD------------------- 361
Query: 491 TNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
T T N + + H + + K+F + +Y+ L+++ C DY + L +
Sbjct: 362 TFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFD 421
Query: 538 E-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
E + G P S+ + ++ G + A ++++ + + G + D +YTT I
Sbjct: 422 ELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVI 480
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ + + L M P++ Y L+
Sbjct: 481 MGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLI 515
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 37/393 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-------NVNAHDLKFTLEVYKNMQKLGVMA 322
G K+ A+ ++ ++ + + +N+++ NV A +KF M+ +G++
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV-----EMRAMGLLP 370
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YN L+ C AGN A ++G++K + L V TY+ ++ + + A
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLK----RAGLAPSVLTYNILLDGYCRLGDLEEA 426
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ K++M+ G P+ T++ L+N + F+EML G +P+ N + A
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ AF+L ++ ++ G D T I + + N Y
Sbjct: 487 ELILGSTSEAFQL------TEVMISRGISSDTVTYNIF------LDGLCKSGNL--KDAY 532
Query: 503 SSFDKRFS--FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ K S +P TY L+ A C + + + M GL P+ +++T+ I A
Sbjct: 533 VLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAY 592
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
GN+ A + M E+G+ P+ V Y I R R A+ F EM + PN
Sbjct: 593 CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNK 652
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY L+ + G+ E + +Y +M + G
Sbjct: 653 YTYTLLIDGNCKEGNWEEA---IRLYSEMHQHG 682
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 164/391 (41%), Gaps = 24/391 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P + TII G+ +R + ++R+ + ++ +NSL+N A +LK L +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++++ G+ + +YNILL C G+ A+ E+ + + DV TY+ ++
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM----VEQGCQPDVSTYTILMN 450
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ M + ++MLS G+ P+ +++ I+A G +A L E M+ G
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ NI L ++ A+ L W V+ G D T H ++ +
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVL---WM---KMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 492 NTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ FD P+ TY + + A C + Y +M G+ PN
Sbjct: 565 EARDI--------FDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +LI A G A Q M E G+SP+ YT I + ++A L+
Sbjct: 617 EVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYS 676
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
EM + I P+ T+ L + S H +Q
Sbjct: 677 EMHQHGIHPDHCTHNALFKGFDEGQSKHAIQ 707
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM--LQ 426
+++ D W V +ML G+ P+ +T+++L+++ G V+QA L EM
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
GC P+ N+++ + ++A +L +SK A
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA------------------- 302
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
F+F P T Y + + AL EM G+ P
Sbjct: 303 ----------------------FTFNPLITGY--FARGSVE---KAGALQLEMENEGIVP 335
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ +I SGNVE A MR G+ PD++ Y + I ++ LK+A LF
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++K + P+++TY LL R G L E ++
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARR 428
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 153/378 (40%), Gaps = 63/378 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL + K+ +P++ ++D G C GD ++R
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD--GYCRLGDLEEARRFK 430
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ Q ++ + LMN + +L E + M G+ D +YN + A +
Sbjct: 431 QEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+T E + + + ++G+ D TY+ + + + A + M+S G+ P+
Sbjct: 491 GST---SEAFQLTEVMISRGI-SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A G + +A +F+ ML +G P++ + + A + R L+
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA------YCRRGNLY- 599
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTT 515
S Y F K +P
Sbjct: 600 ------------------------------------------SAYGWFQKMLEEGVRPNE 617
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN+L+ A C A +EM GLSPN ++T+LID GN E A+++
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677
Query: 574 MREDGMSPDVVAYTTAIK 591
M + G+ PD + K
Sbjct: 678 MHQHGIHPDHCTHNALFK 695
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ N+ FN+L+ + F +V M G D+ Y +L C
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVC 306
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ +A EI + + + G LK +V Y+T++K A+ W+ A ++ +M
Sbjct: 307 KEGHLEVAHEI---LDRMPSYG-LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP 362
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ +T++ L++ GLV + + L E+ML+ GC P+ ++ + D A L
Sbjct: 363 LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVML 422
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+S A G +P T
Sbjct: 423 LKSMA------ACG-----------------------------------------CRPNT 435
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+Y I++K C+ V A LM++M G SPN +++ +I+ G VE A+++LK
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M +G SPD+++Y+T I ++ + +A L M + + PN + Y ++ A S+ G
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 634 LHEVQQCLAVYQDM 647
++ V Q QD+
Sbjct: 556 INRVIQMFDNIQDV 569
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 162/390 (41%), Gaps = 63/390 (16%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y+CR G + + + + T +I ++ ++++ L+ E+
Sbjct: 269 YLCRN--------GLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M G+ ++ YN +LK C A A+E+ E+ + LD T++ +V F
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP----LDDVTFNILVDFFC 376
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+++ E ML G P+ IT++++IN GL+++A+ L + M GC PN+
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
I+L+ C +R W ++ D +S M +
Sbjct: 437 SYTIVLKG---LCSAER-------WVDAE-------------DLMSQMIEQ--------- 464
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
P T+N ++ C +A L+ +M G SP+ IS++
Sbjct: 465 ---------------GCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYS 509
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+ID G +G + AL++L +M GMSP+ + Y++ + R+ + +F+ ++
Sbjct: 510 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
I+ + V Y ++ + + G + LA
Sbjct: 570 TIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 29/354 (8%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + V +++ G D+ + N++L A C G +V E ++ L DV
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV--DEALRLLRDLPTSFGCDPDVV 226
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++K AK W + E+M+ G PN +T+++LI GL E+ + +M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRI 479
+ GC P+ + +L + + A + S+ L V G + +R
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
E + N D T+NIL+ C + YRV L+
Sbjct: 347 EQAEELLAEMFDND---------CPLDD--------VTFNILVDFFCQNGLVYRVIELLE 389
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G P+ I++T +I+ G ++ A+ +LK M G P+ ++YT +K ++
Sbjct: 390 QMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAE 449
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R A L +M PN VT+ T++ + G V+Q + + + M G
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL---VEQAIELLKQMLLNG 500
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 21/260 (8%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ-- 448
S V PN T+ ++ A G + A+ + +EM + GC P +++L+A AC
Sbjct: 108 SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEA---ACSRG 164
Query: 449 ----FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
F A R+ + L AL GN + + N S+ + + S
Sbjct: 165 GGGGFRSAVRVLQD--LHGRGCALDV---GNCNLVLNAVCDQGGSVDEALRLLRDLPTS- 218
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
F P +YN ++K C + RV+ LM EM VG PN +++ LI +G
Sbjct: 219 ----FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNG 274
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
E Q+L M + G +PD+ Y T + + L+ A + + M Y ++PN+V Y
Sbjct: 275 LFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYN 334
Query: 623 TLLRARSRYGSLHEVQQCLA 642
T+L+ + ++ LA
Sbjct: 335 TVLKGLCSAERWEQAEELLA 354
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 36/330 (10%)
Query: 254 PNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN+ T++ G+C + ++ + ++ + L+ FN L++ + + +
Sbjct: 328 PNVVCYNTVLK--GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVI 385
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + M + G + D+ +Y ++ C G L E +K + A G + + +Y+ +
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEG---LIDEAVMLLKSMAACGC-RPNTISYTIV 441
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K A+ W A + M+ G +PN +T++++IN GLVEQA+ L ++ML GC
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ + ++ +A + D A L T+ + +A +G +R+
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
M + + + N+ SS KR TD R + M +
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGG----------------TD--RAIEFLAYMVS 603
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQIL 571
G PN ++TILI G V+ A ++L
Sbjct: 604 SGCMPNESTYTILIRGLASEGFVKEAQEML 633
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 507 KRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDA-CGG 560
+R P Y+++++A C+ + ++ ++ G + + + ++++A C
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201
Query: 561 SGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G+V+ AL++L+ + G PDVV+Y +K +KR + L EEM PN+V
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQD 646
T+ TL+ R G V Q LA D
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVD 288
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 159/329 (48%), Gaps = 23/329 (6%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K K D T + ++ + W+ A+ +
Sbjct: 138 YNMMIRLHARHNWTDQARGLFFEMQ----KWRCKPDAETCNALINAHGRSGQWRWAMNIM 193
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
EDML + P+ T+++LINAC ++G +A+ L ++M + G P+ NI+L A
Sbjct: 194 EDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTG 253
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--VPNSHYSS 504
Q+ +A F ++ G + +T ++ + + +T + S
Sbjct: 254 AQYAKALSYF--------ELMKGTNIRPDTTTLNIIIY----CLTKLGQYEKAIGIFKSM 301
Query: 505 FDKRFSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+KR P T+ I + + +A+ + M GL PN +S+ L+ A G
Sbjct: 302 REKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHG 361
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ AL + ++ G+ PDVV+YT+ + RS++ K+A +FE MK +++PN+V+Y
Sbjct: 362 MNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYN 421
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A YGS + + + V ++M + G
Sbjct: 422 AMIDA---YGSNGLLAEAVEVLREMEQDG 447
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 54/445 (12%)
Query: 219 RADILFCNFVREFGKKRDLVS---ALRAYDASKKHLSS-------------PNMYICRTI 262
R + C + E G DLV+ L AY ++ + P+ I
Sbjct: 222 REALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNII 281
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMN---VNAHDLKFTLEVYKNMQK 317
I G Y K+ I++ +R + ++ F S+++ VN ++ V+ M
Sbjct: 282 IYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQ-IENCRAVFSTMVA 340
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ ++ SYN L+ A G A ++ +K+ L+ DV +Y++++ + ++
Sbjct: 341 EGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKN----SGLRPDVVSYTSLLNSYGRSQ 396
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A +V E M + PN ++++++I+A + GL+ +A+ + EM Q G PN+
Sbjct: 397 QPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSIC 456
Query: 438 ILLQAC---VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
LL AC D + + +A Y+ N+ +K +
Sbjct: 457 TLLAACGRCSRKVNIDVVLQAAERRHIKLNTIA----YNSAIGSYMNVGEFEKAT----- 507
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
S Y S K P T+ +L+ CC T Y ++EM + + +++
Sbjct: 508 -----SMYRSMRKS-KVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYS 561
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
SG + A + M+ G SPDVV YT + ++ K+A +L +EM+ Y
Sbjct: 562 --------SGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEY 613
Query: 613 QIQPNLVTYITLLRARSRYGSLHEV 637
IQP+ + L+RA ++ G +V
Sbjct: 614 NIQPDTIACSALMRAFNKGGDPSKV 638
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 162/380 (42%), Gaps = 26/380 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ C +I+ G G + + I ED+ + + + +N+L+N ++ + + L++
Sbjct: 168 PDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKL 227
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M + GV D+ ++NI+L A A + +K ++ D T + I+
Sbjct: 228 CKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTN----IRPDTTTLNIIIY 283
Query: 372 VFADAKWWQMALKVKEDMLS--AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A+ + + M A P+ +T++S+I+ + G +E +F M+ G
Sbjct: 284 CLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGL 343
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN N L+ A A +F + S L D T +++ +
Sbjct: 344 KPNIVSYNTLMGAYASHGMNKEALSVFNAIKNS----GLRPDVVSYTSLLNSYGRSQQ-- 397
Query: 490 ITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
P F+ KR KP +YN ++ A ++ +A+ + EM G+
Sbjct: 398 --------PKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIY 449
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +S L+ ACG +L+ + + +AY +AI + ++A S+
Sbjct: 450 PNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSM 509
Query: 606 FEEMKHYQIQPNLVTYITLL 625
+ M+ ++ P+ VT+ L+
Sbjct: 510 YRSMRKSKVIPDAVTFTVLI 529
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T++ CG C + + + +++ LN +NS + +N + + +
Sbjct: 450 PNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSM 509
Query: 312 YKNMQKLGVMADMASYNILLKACC---------------LAGNTVLAQEIYGEVKHLEAK 356
Y++M+K V+ D ++ +L+ CC + + +E Y K EA+
Sbjct: 510 YRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAE 569
Query: 357 GV---LKL-----DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +K+ DV TY+ ++ + A+ W+ A + ++M + P+TI S+L+ A
Sbjct: 570 SMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAF 629
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
G + + L E M E + + V AC R +R
Sbjct: 630 NKGGDPSKVLILAEFMR----EKEIPLSDAIFFEMVSACSLLRDWR 671
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 173/403 (42%), Gaps = 38/403 (9%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK +D L+ DA K C II VC GD + A++E+ + + +I
Sbjct: 307 GKIQDASRILK--DAKFKGFVPDEFTYCSLIIGVCQD-GDIDHALALFEEALGKGLKPSI 363
Query: 292 YVFNSLM-NVNAHDLKF-TLEVYKNMQKLGVMADMASYNILLKACCLAG-----NTVLAQ 344
++N+L+ ++ L L++ +M K G+ D+ +YN+++ C G N +L
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I AKG L D+FT++T++ + A+ + + M S GVTP+ IT++S+
Sbjct: 424 AI--------AKGYLP-DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTL 461
+N A E M F+ +++ GC PN NIL+++ +A + A L R+ L
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V+ G G + N + + + + ++++ T TYNI+
Sbjct: 535 IPDPVSFGTVISGFCN---NGDLDEAYQL-----------FRRMEQQYRICHTVATYNIM 580
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A D + L +EM G P+ ++ ++ID GNV L E G
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGF 640
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
P + + I R+ +A + M + P V I
Sbjct: 641 VPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTI 683
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 196/446 (43%), Gaps = 32/446 (7%)
Query: 207 VNLAIRYACIVPRADILFCNF---VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
V L +++ I P C F ++ F + + ++ALR + N + T+I
Sbjct: 133 VYLRMKHEGIAPDV----CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVI 188
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVM 321
+++ ++ + + +I FN LM++ L+ ++ + K GV
Sbjct: 189 SGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC 248
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKW 378
++ ++NI ++ C G A E ++ K V L+ D FTY+TI+ ++
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGK 308
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
Q A ++ +D G P+ T+ SLI G ++ A+ LFEE L G +P+ N
Sbjct: 309 IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNT 368
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L++ + +A +L ++ + D I+ + K + N +
Sbjct: 369 LIKGLSQQGLVLKALQLMNDM----SKEGMSPDIWTYNLVINGL---CKMGCVSDANNLL 421
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-----ALMNEMRTVGLSPNHISWTI 553
N+ + + P T+N L+ C R+K +++ M + G++P+ I++
Sbjct: 422 NAAIAK-----GYLPDIFTFNTLIDGYCK---RLKMDNAIGILDSMWSHGVTPDVITYNS 473
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+++ + E ++ K++ E G P+++ Y I+ +++++ +A L EE+++
Sbjct: 474 ILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRG 533
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQ 639
+ P+ V++ T++ G L E Q
Sbjct: 534 LIPDPVSFGTVISGFCNNGDLDEAYQ 559
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 172/454 (37%), Gaps = 43/454 (9%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYIC-RTIIDVCGICGDYMKSRAIYEDLR---SQNVTL 289
++D + AL +++ KK + ++ + +I+ G G++ + ++R ++
Sbjct: 17 QKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLE 76
Query: 290 NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+YV ++ ++V++ M + SYN ++ G A ++Y
Sbjct: 77 GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+KH +G+ DV T++ +K F K AL++ +M S G N + + ++I+
Sbjct: 137 MKH---EGIAP-DVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFY 192
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL-------------- 455
+A LF +ML+ G P+ N L+ + +L
Sbjct: 193 EENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLF 252
Query: 456 -FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF--------- 505
F + + + E + N HK +F N+ +
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312
Query: 506 -----DKRF-SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
D +F F P TY L+ C D AL E GL P+ + + LI
Sbjct: 313 SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKG 372
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G V ALQ++ M ++GMSPD+ Y I + + A +L P+
Sbjct: 373 LSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPD 432
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ T+ TL+ Y ++ + + MW G
Sbjct: 433 IFTFNTLIDG---YCKRLKMDNAIGILDSMWSHG 463
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 21/329 (6%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+ + G + D +Y L+ C G+ A ++ E KG LK + Y+T++
Sbjct: 315 ILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL---GKG-LKPSIVLYNTLI 370
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + AL++ DM G++P+ T++ +IN G V A +L + G
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL 430
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRS-WTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + D A + S W+ T D I+ +
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT-----------PDVITYNSILNGLC 479
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P V + +K P TYNIL+++ C +AL + E+R GL P+
Sbjct: 480 KAAKPEDVMETFKMIMEK--GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 548 HISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+S+ +I +G+++ A Q+ + M + + V Y I + A LF
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
EM P+ TY ++ + G+++
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVN 626
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 61/437 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
FGK D+V A + + + SP + I G+C G + + DLR +N
Sbjct: 263 FGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH--GLCRAGCVEFALRLIRDLRIRNQP 320
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
LN Y +N++++ +L E+ ++M+ G+ SY+IL+ C G A ++
Sbjct: 321 LNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDL 380
Query: 347 YGEV--------------------------------KHLEAKGVLKLDVFTYSTIVKVFA 374
E+ +L A+G K DV +Y+T++ F
Sbjct: 381 IEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGY-KHDVISYNTLINGFV 439
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A K+ +M G PN+ T++ LI+ +++A+ +F ML+ G + N
Sbjct: 440 LQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIF 499
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM----EHKDKQSI 490
CNI+ A +F+R + + L LG + T I E K +++
Sbjct: 500 TCNIM------ADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
P + N+ + P YN L+ KAL+ +M VG+ P+
Sbjct: 554 EVLPVMLKNNVF----------PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSI 603
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T+LI+ ++ A + K M + G+ PD + +T I + +K A++L+EE
Sbjct: 604 VTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEE 663
Query: 609 MKHYQIQPNLVTYITLL 625
M + PN+VTY L+
Sbjct: 664 MSQWGKSPNVVTYTCLI 680
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/456 (19%), Positives = 190/456 (41%), Gaps = 39/456 (8%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ F + LV A + +++ N+ C +++ R+++E+L+
Sbjct: 185 IKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGP 244
Query: 288 TLNIYVFNSLMNVNAH-------DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ N++ + +MN D+ EV + M+ G + +Y + C AG
Sbjct: 245 SPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCV 304
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A + ++ L + L+ + Y+ ++ F A ++ EDM S G++P +
Sbjct: 305 EFALRL---IRDLRIRNQ-PLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYS 360
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW- 459
+S LI+ G VE+A+ L EEM+Q+ +P+ + L ++ + + +F +
Sbjct: 361 YSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLG 420
Query: 460 -------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+S + G + + H+ + + + +F N F KR
Sbjct: 421 AEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLD 480
Query: 513 PTTTTYNILMKA-------CCT----------DYYRVKALMNEMRTVGLSPNHISWTILI 555
+ I++K C ++ L+NE++ +G+ PN ++ I+I
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVI 540
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
E A ++L +M ++ + P + Y T I + +A L+ +M I
Sbjct: 541 KWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIP 600
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++VTY L+ + + + ++Q+ ++++M K G
Sbjct: 601 PSIVTYTMLI---NMFSNRSKMQEAYYLFKEMIKKG 633
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 38/346 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IY 279
I + + F +RD+ SA + + + S PN + +I G C +A ++
Sbjct: 429 ISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIH--GFCKRQRLDKALEVF 486
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ V LNI+ N + + + F L++ +Q LG++ + +YNI++K C
Sbjct: 487 TIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKE 546
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFT----YSTIVKVFADAKWWQMALKVKEDMLSAG 393
T A E+ +LK +VF Y+T++ +A AL + ML G
Sbjct: 547 QKTEKAWEV--------LPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG 598
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ +T++ LIN +N +++A +LF+EM++ G P+ ++ + A+
Sbjct: 599 IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAW 658
Query: 454 RLFR---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
L+ W S V DG +I M+ D F+ N KR +
Sbjct: 659 ALYEEMSQWGKSPNVVTYTCLIDGYF-KIKRMDKAD---------FLFNKM-----KRDN 703
Query: 511 FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
P TY L+ + Y RV+ + NEM+ G+ PN+ ++ L
Sbjct: 704 VTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 183/428 (42%), Gaps = 51/428 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K+ DL A +A+ ++ + SP++Y T+I G+C G K+ + +D+++ + +
Sbjct: 170 KRVDL--AEKAFRSALRRRVSPDIYTFNTVIS--GLCRIGQLRKAGDVAKDIKAWGLAPS 225
Query: 291 IYVFNSLMN-----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+ +NSL++ A ++ + K M + G+ ++ +L+ C NT A
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E+K +G+ V TY++++ + +K+ E+M G++PN IT+ ++
Sbjct: 286 VFEEMKQ---QGI-AASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G++ A + M + EP+ NIL+ ++R +
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILID-------------VYRRLGKMEDA 388
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPT 514
+A+ E M K T N + S D K +
Sbjct: 389 MAVKE----------AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 515 TTTYNILMKA-CCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN+L+ A CC R L++EM VGL PNH+++ +I GN++ A +I
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + +VV Y IK + ++ +A L EM + PN +TY T+ G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Query: 633 SLHEVQQC 640
+++ C
Sbjct: 559 YTPDIRGC 566
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 156/373 (41%), Gaps = 38/373 (10%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + + +++ + V D+ ++N ++ C G A ++ K ++A G L
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV---AKDIKAWG-L 222
Query: 360 KLDVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLV 414
V TY++++ K + + + +KE M+ AG++P +T+ LIN C N+
Sbjct: 223 APSVATYNSLIDGYCKKGGAGNMYHVDMLLKE-MVEAGISPTAVTFGVLINGYCKNSN-T 280
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGED 471
A+ +FEEM Q G + N L+ + + +L LS ++ G
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 472 YDG---------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------------RFS 510
G D I M ++ + N + + Y K +
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV-YRRLGKMEDAMAVKEAMAKKG 399
Query: 511 FKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TTYN L+ D+ L++EM+ G+ + +++ +LI A G V A+
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M E G+ P+ + Y T I+ +K A+ + M+ + + N+VTY ++
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 629 SRYGSLHEVQQCL 641
+ G + E L
Sbjct: 520 CQIGKMDEANDLL 532
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-C- 558
S+ +R S P T+N ++ C KA + +++ GL+P+ ++ LID C
Sbjct: 181 SALRRRVS--PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238
Query: 559 -GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GG+GN+ +LK M E G+SP V + I ++ A +FEEMK I +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+VTY +L+ G + E + + +D+
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 142/333 (42%), Gaps = 63/333 (18%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
AS+++ + SG+ EG+++ V +++++ +LG++P E+ G +LK C++ +
Sbjct: 297 ASVVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGC---VLKGFCKKGMM 350
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+ + G+ E R V+ PDV + Y ++ +
Sbjct: 351 ADANDWIDGMTE----------------RNVE-----PDV---VIYNILI--------DV 378
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R GK D A+ +A K SPN+ +I GD+ + + ++++ + +
Sbjct: 379 YRRLGKMED---AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +N L+ +++ +++ M ++G+ + +YN +++ C GN A E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I ++ + +V TY+ +K F A + +ML + PN IT+ +
Sbjct: 496 IRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET-- 549
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ E M++ G P+ + C +
Sbjct: 550 --------------IKEGMMEKGYTPDIRGCTV 568
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 195/449 (43%), Gaps = 66/449 (14%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+N RY+ V +++ N +R KK DL L +D ++ SP+ Y T+I
Sbjct: 124 INEVARYSPSVFAYNVVLRNVLR--AKKWDLAHGL--FDEMRQRALSPDRYTYSTLITSF 179
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADM 324
G G + +S + + V+ ++ ++++L+ ++ D + ++ +++ G+ D+
Sbjct: 180 GKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDL 239
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YN ++ G L +E V + GVL D +YST++ V+ + + + AL
Sbjct: 240 VAYNSMINVF---GKARLFREARMLVHEMREVGVLP-DTVSYSTLLSVYVENEKFVEALS 295
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V +M A + + +T + +I+ +V++A LF M + G EPN N LL+
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYG 355
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
EA F A LFR M+ K+
Sbjct: 356 EAELFGEAIHLFRL-----------------------MQRKE------------------ 374
Query: 505 FDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ TYN ++K ++ + L+ EM+ G+ PN I+++ +I G +G
Sbjct: 375 ------IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAG 428
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A + + +R G+ D V Y T I R+ + A L ++K P+++
Sbjct: 429 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKC----PDIIPRD 484
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T ++ +R G +++ V++ + AG
Sbjct: 485 TAIKILARAG---RIEEATWVFRQAFDAG 510
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 221 DILFCNFVREFGKKRDLV-SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D++ CN + + + D+V A R + + +K PN+ T++ V G + ++ ++
Sbjct: 308 DLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLF 367
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ + + N+ +N+++ + L+ + + MQK G+ + +Y+ ++ A
Sbjct: 368 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKA 427
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + L + GV ++D Y T++ + A A ++ D+ P+
Sbjct: 428 GKLDRAAMLF---QKLRSSGV-EIDQVLYQTMIVAYERAGLVAHAKRLLHDL----KCPD 479
Query: 398 TITWSSLINACANAGLVEQA-----------------------------------MHLFE 422
I + I A AG +E+A + +FE
Sbjct: 480 IIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFE 539
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+M AG P+S ++L A + +F++A ++R
Sbjct: 540 KMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYR 574
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 41/441 (9%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTL 289
G RDL+ ++ S+ L + N Y I V G C ++K A +L +QN L
Sbjct: 259 LGDARDLLMDMK----SRGLLPNRNTYN----ILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 290 -NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+++ +N L+N N ++ ++ M+ L ++ D+ SYN L+ C L + + E
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC-LEWSKI--SEA 367
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + KGV K + T++ +VK + A M +G +P+ +T+++LIN
Sbjct: 368 FKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
AG + +A +EM + + +S N +L+ + + A++L S
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 460 -TLSKTQVALGEDYDGNTDRISNM--EHKDKQSITNTPNF-----------VPNSHYSSF 505
+S + +G DGN DR + E K+K+ I +T + S
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 506 DKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++ P TTYN ++ C D + N+M P+ + IL+
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G +E AL++ G + D V Y T I + RL AF+L EM+ ++ P+ TY
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 622 ITLLRARSRYGSLHEVQQCLA 642
++ A + G + E ++ ++
Sbjct: 667 NAIITALTDSGRIREAEEFMS 687
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 200/482 (41%), Gaps = 75/482 (15%)
Query: 229 REFGKKRDLVSALRAYDASKKH--------LSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
R+F + L+ A D ++H L+SP+ + T I G + I++
Sbjct: 102 RKFSDAKSLLLGFIATD--RRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFK 159
Query: 281 DLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N+ N+L+N ++H + F+ E + + KLG++ ++ ++NI++ C
Sbjct: 160 KMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYC 219
Query: 336 LAG------------------------NTVL----AQEIYGEVKHL----EAKGVLKLDV 363
L NT+L + G+ + L +++G+L +
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLP-NR 278
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+ +V + W + A V E M + P+ T++ LIN N G +E+A L +E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------------LSKTQVALGE 470
M P+ N L+ C+E + AF+L + + K G+
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH---------YSSFDK--RFSFKPTTTTYN 519
D ++ I+ ME T N + N + + + D+ R + K + T N
Sbjct: 399 -MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+++ C + +A L++ R G + +S+ LI GNV+ AL++ M+E
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ P V Y I + + +QA S E+ + P+ TY T+L R G + +
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 638 QQ 639
Q
Sbjct: 578 FQ 579
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 160/402 (39%), Gaps = 82/402 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
SP+ T+I+ G+ ++ +++ +N+ ++ N+++ + K E Y
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE-EAY 473
Query: 313 K---NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
K + +K G D SY L+ GN A +++ E+K E + TY+ I
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE----IIPSTVTYNCI 529
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A+ ++L +G+ P+ T++++++ G VE+A +M++
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 430 EPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ CNILL+ C+E ++A +LF +W V+ G+ D
Sbjct: 590 KPDVFTCNILLRGLCMEGV-LEKALKLFNTW------VSKGKAID--------------- 627
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
T TYN L+ + C + A L++EM L P
Sbjct: 628 --------------------------TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGP 661
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPD-----------------------V 583
+H ++ +I A SG + A + + M E G PD
Sbjct: 662 DHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSS 721
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
VAY+ IK + K A +F E K I + TYI L+
Sbjct: 722 VAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+P+ + I A +G A +F++M + PN CN LL + V ++ +
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSH 187
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRI----SNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ S + LG + NT I +E+K K ++ + + ++
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV----------EFLNVMGKY 237
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P TYN ++ C + L+ +M++ GL PN ++ IL+ G ++ A
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++++M ++ + PDV Y I R+++AF L +EM++ ++ P++V+Y TL+
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357
Query: 628 RSRYGSLHEVQQCL 641
+ + E + L
Sbjct: 358 CLEWSKISEAFKLL 371
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNIL+ C + +A ++ M L P+ ++ +LI+ G +E A ++
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M + PDVV+Y T I C+ ++ +AF L EEM ++PN VT+ +++ +
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395
Query: 631 YGSLHEVQQCLAVYQD 646
G + + + ++
Sbjct: 396 EGKMDDASNTITKMEE 411
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
SP TAI V+S + AF +F++MK +++PNL+T TLL + RY S H V
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 640 CLAVYQDMWKAG 651
+ D K G
Sbjct: 192 SREAFNDAIKLG 203
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 28/387 (7%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMA 325
G + + A++ + V I +N +++V A K +E+ +M++ GV D
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRY 244
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A +++ E+K A G + D T+++++ V+ A+ A++V
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMK---ASG-FEPDKVTFNSLLDVYGKARRHDEAIEV 300
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M G P+ +T++SLI++ GL+EQA+ L +EM G +P+ L+
Sbjct: 301 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDR 360
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + D A + + + L N K P + + F
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKPNLC---------TYNALIKMHGVRGKFPEMM-----AVF 406
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D+ S F P T+N L+ + V + EM+ G P ++ LI +
Sbjct: 407 DELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 466
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + A+QI K M E G+ PDV Y + R R +QA LF EM+ +P+ +Y
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 526
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMW 648
+LL A Y + + + A+ D++
Sbjct: 527 SSLLHA---YANAKRLDKMKALSDDIY 550
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 189/422 (44%), Gaps = 22/422 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + +A+ YD ++ PN+ +I + G+ G + + A++++
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 282 LRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
LRS +I +N+L+ V N D + + V+K M+K G + + +Y L+ + G
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKKAGYIPERDTYVSLISSYSRCG 467
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA +IY K + G+ DV TY+ ++ A W+ A K+ +M P+
Sbjct: 468 LFDLAMQIY---KRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++SSL++A ANA +++ L +++ EP++ L+ + A + F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF-- 581
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L + + +L D N + + + + S K + + TY
Sbjct: 582 LELRQKRCSL----DINVLNAMVSIYGKNRMVRKVEKIL------SLMKESAINLSAATY 631
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N LM + D + + ++ E+++ G+ P+ S+ +I A G G ++ A ++ M+
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ PDVV Y +K V + ++A L M +PN TY +++ R G L +
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751
Query: 637 VQ 638
+
Sbjct: 752 AK 753
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 57/332 (17%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQM 381
D +Y L+ A AG A ++ + + GV + + TY+ ++ V++ A W+
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVF---RRMVDSGV-QPAIVTYNVVLHVYSKMAVPWKE 226
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+++ M GV P+ T+++LI+ C L ++A +F+EM +G EP+ N LL
Sbjct: 227 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 286
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + D A + I ME
Sbjct: 287 VYGKARRHDEAIEV-----------------------IQEME------------------ 305
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
R P+ TYN L+ + D + AL EM G+ P+ +++T LI
Sbjct: 306 ------RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLD 359
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A+ M +G P++ Y IK+ + + ++F+E++ P++V
Sbjct: 360 RAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIV 419
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T+ TLL + G EV V+++M KAG
Sbjct: 420 TWNTLLAVFGQNGLDSEVS---GVFKEMKKAG 448
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 167/398 (41%), Gaps = 55/398 (13%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDL 305
K+H +P+ Y T+I C Y ++ +++++++ + FNSL++V A
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+EV + M+++G + +YN L+ + G L ++ + +E KG+ K DV T
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDG---LLEQAVALKQEMEVKGI-KPDVVT 350
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A A+ ++M+ G PN T+++LI G + M +F+E+
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELR 410
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--E 483
AG P+ N LL G++ G +S + E
Sbjct: 411 SAGFVPDIVTWNTLL-------------------------AVFGQN--GLDSEVSGVFKE 443
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K I +V S SS+ + F Y +M+A G
Sbjct: 444 MKKAGYIPERDTYV--SLISSYSRCGLFDLAMQIYKRMMEA------------------G 483
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ ++ A G E A ++ M E PD +Y++ + +KRL +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 543
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+L +++ +I+P+ TL+ S+ +L E ++
Sbjct: 544 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +GVL +T ++V A A L +L A P+ +++L++A +
Sbjct: 130 RELHGEGVLH-HPRVLATAIRVMARAG----RLAEASALLDAAPGPDAGAYTALVSAFSR 184
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG A+ +F M+ +G +P N++L SK V E
Sbjct: 185 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH------------------VYSKMAVPWKE 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
+ +++M K P TYN L+ +CC
Sbjct: 227 ----VVELVASM------------------------KEHGVAPDRYTYNTLI-SCCRRRA 257
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y + +EM+ G P+ +++ L+D G + + A+++++ M G P VV Y
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ I V+ L+QA +L +EM+ I+P++VTY TL+ R G ++ + Y +M
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAG---KIDAAIVEYDEM 374
Query: 648 WKAG 651
+ G
Sbjct: 375 VRNG 378
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 185/406 (45%), Gaps = 39/406 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ TIID GD K+ Y ++ + V+ + +NS++ A + +EV
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M VM + +YN ++ C +G + ++ G + + + G+ + DV TY++++
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQS---EKAIGIFRKMCSDGI-EPDVVTYNSLMD 120
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A K+ + M+ G+ P+ T+ +L++ A+ G + + L M+Q G +
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGN------TDRISNM 482
+ NIL+ A + + D +F R L+ V DG D + N
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 483 EHKDKQSITNTPNFVPNSH-------YSSFDK---------RFSFKPTTTTYNILMKACC 526
E + +T PN V + Y ++K P +N ++ + C
Sbjct: 241 EQMIDKGLT--PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298
Query: 527 TDYYRV--KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + K L + + +G++P+ I+++ LID +G ++GA+++L M G+ PD V
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
Y+T I + R++ A +LF+EM+ + P+++TY +L R
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 24/397 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN + +I+ G C G K+ I+ + S + ++ +NSLM+ + K T
Sbjct: 75 PNCFTYNSIMH--GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ +M K G+ D+ +Y LL G V ++ L + ++LD ++ +
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA----LMVQNGMQLDHHVFNIL 188
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + + V M G+TPN + + ++I+ G ++ AM FE+M+ G
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ A C +D+ W K + + E D + + S
Sbjct: 249 TPNVVVYTSLIHAL---CTYDK-------W--EKAEELIFEILDQGINPNIVFFNTILDS 296
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + + P TY+ L+ C A L+ M +VGL P+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LI+ +E AL + K M +G++PD++ Y + R++R A L+
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+ Q L TY +L ++ SL C Y
Sbjct: 417 RITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRTY 453
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
+IL C + ++ +K D V + + ++ +PN RT+ID G+C G +
Sbjct: 186 NILICAYTKQ--EKVDEV--VLVFSKMRQQGLTPNAVNYRTVID--GLCKLGRLDDAMLN 239
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--------NAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
+E + + +T N+ V+ SL++ A +L F + G+ ++ +N +
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI------LDQGINPNIVFFNTI 293
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L + C G + +++++ + H+ GV DV TYST++ + A A+K+ M+
Sbjct: 294 LDSLCKEGRVIESKKLFDLLGHI---GV-NPDVITYSTLIDGYCLAGKMDGAMKLLTGMV 349
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G+ P+++T+S+LIN +E A+ LF+EM G P+ NI+L +
Sbjct: 350 SVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409
Query: 451 RAFRLFRSWTLSKTQVAL 468
A L+ T S TQ+ L
Sbjct: 410 AAKELYARITESGTQLEL 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+++ D+R S P TYN ++ A +A+ E+ TV + PN ++ ++
Sbjct: 33 TYHEMLDRRVS--PDAVTYNSIIAALSKAQAMDRAM--EVLTVMVMPNCFTYNSIMHGYC 88
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG E A+ I + M DG+ PDVV Y + + ++ + +A +F+ M ++P++
Sbjct: 89 SSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDIT 148
Query: 620 TYITLLRARSRYGSLHEVQQCLAV 643
TY TLL + G+L E+ LA+
Sbjct: 149 TYGTLLHGYASKGALVEMHDLLAL 172
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 574 MREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +DG PDVV+Y T I + + +A+ + EM ++ P+ VTY +++ A S+
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 633 SLHEVQQCLAV 643
++ + L V
Sbjct: 61 AMDRAMEVLTV 71
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 158/386 (40%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 99 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAY 157
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV +
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L +
Sbjct: 274 MVDRAFEMIRNLELKGCE------------------------------------------ 291
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 292 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 346
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + Q L ++ + + G
Sbjct: 407 ATLCKNG---KADQALEIFGKLGEVG 429
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 186/473 (39%), Gaps = 99/473 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 119 DVILCTKLIKGFFTLRNVPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 175
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V + L++ N T
Sbjct: 176 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATM 235
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ +++LE KG +
Sbjct: 236 LEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---IRNLELKGC-E 291
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 292 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 394
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 395 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 424
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 425 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGM 484
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +AF L +M+ + P++VTY +L + H ++ + V M G
Sbjct: 485 VDKAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAIDVLDSMVGNG 534
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 28/339 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL+ D P+M+ TII G+C + M RA + +L + ++ +N L
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIR--GMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + K+ E K M K+ ++ +Y+IL+ C G +E +K ++
Sbjct: 301 LRALLNQGKWE-EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI---EEAMNLLKLMK 356
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG L D ++Y ++ F +A++ E M+S G P+ + +++++ G
Sbjct: 357 EKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA+ +F ++ + GC PNS N + A + RA + V+ G D D
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM------VSNGIDPD- 468
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYRVK 533
+ + S V + D R F P+ TYNI++ C +
Sbjct: 469 ------EITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 522
Query: 534 AL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
A+ ++ M G PN ++T+LI+ G +G A+++
Sbjct: 523 AIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+C + +E ++HL E M++ G P+ C L++ +A R+ L K
Sbjct: 95 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME--ILEKFGQ 151
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKA 524
Y+ + M D + D+ S F P T TYNI++ +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDAT-------------RVLDRMRSKDFSPDTVTYNIMIGS 198
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C+ AL ++++ + P I++TILI+A G V+ AL++L M G+ PD
Sbjct: 199 LCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ Y T I+ + + +AF + ++ +P++++Y LLRA G E ++ +
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L LE+ N G+ D +YN ++ C G A E+ +++ E V
Sbjct: 454 LHMILEMVSN----GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE----FHPSVV 505
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F A + A+ V + M+ G PN T++ LI AG +AM L ++
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Query: 425 LQ 426
++
Sbjct: 566 VR 567
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 56/387 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V I +N +++V + + + M+
Sbjct: 94 TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRA 153
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L + + L+A+G + V TY+ +++VF A
Sbjct: 154 AGVEPDDFTASTVIAAC---GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAG 209
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 269
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF DR+
Sbjct: 270 TVMTAYANVGRVDEALALF--------------------DRM------------------ 291
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ + P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 292 ---------KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 342
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L M+ G+ Y T I R AF +++EM
Sbjct: 343 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 402
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
P L TY LL SR G Q ++
Sbjct: 403 PCLTTYNALLNVLSRQGDWSTAQSIVS 429
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL+ + ++ P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 108 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 167
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D L + +++++ G + + +YN LL+ AGN A + +K +E
Sbjct: 168 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRV---LKEMEDS 224
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D TY+ + +A A +++ A K + M S G+ PNT T+++++ A AN G V++
Sbjct: 225 GC-QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDE 283
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G PN N++ + +F + + S T +A
Sbjct: 284 ALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLA 343
Query: 468 L-----GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------- 512
+ EDY T ++ M+ + +T N + +++ + ++FK
Sbjct: 344 VCGKRGMEDY--VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 513 -PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTYN L+ D+ ++++++M G PN S+++L+ GN G
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 461
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I K + + P V T + + +RL+ F+E+K +P+LV + ++L +
Sbjct: 462 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 521
Query: 630 RYG 632
+ G
Sbjct: 522 KNG 524
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 31/420 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G ++ A+++ ++ N+ +N + + +FT LE+
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G + ++N +L C G + + + +++ GV +L TY+T++
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLNGMKSCGV-ELSRDTYNTLIS 378
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+S+G TP T+++L+N + G A + +ML+ G +P
Sbjct: 379 AYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 438
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALG------EDYDGNT 476
N Q ++LLQ A +E+ + + +F SW + +T V E +
Sbjct: 439 NDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAF 498
Query: 477 DRISNMEHKDKQSITNT--PNFVPNSHYSS----FD--KRFSFKPTTTTYNILMK--ACC 526
+ +K I N+ + N YS FD K+ P TYN LM A
Sbjct: 499 QEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKS 558
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + + ++ ++++ + P+ +S+ +I+ G ++ A +IL M DGM+P VV Y
Sbjct: 559 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 618
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T + + +A + M H+ ++P +TY ++ + + E ++ L+ D
Sbjct: 619 HTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEG 566
R + TT + L +A Y R L E+R G+ P +++ +++D G G +
Sbjct: 86 RLDVRAYTTVLHALSRA--GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 143
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ +L+ MR G+ PD +T I C R L QA + FE++K P +VTY LL+
Sbjct: 144 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 203
Query: 627 ARSRYGSLHEVQQCLAVYQD 646
+ G+ E + L +D
Sbjct: 204 VFGKAGNYTEALRVLKEMED 223
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I P IL + F K R L +A+ K P++ I +++ + G Y
Sbjct: 469 GTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 527
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ +++ ++ ++ ++ +NSLM++ A ++ ++ K ++ V D+ SYN ++
Sbjct: 528 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 587
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G AQ I E + A G+ V TY T+V +A + + A +V M+
Sbjct: 588 NGFCKQGLIKEAQRILSE---MIADGMAPC-VVTYHTLVGGYASLEMFNEAREVVNYMIH 643
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN-SQCCNILLQACVEACQFD 450
+ P +T+ ++++ A ++A E+ + + N Q +L+A ++ QF
Sbjct: 644 HNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI--SDTDQNFDQKLQHMLEARIKDAQFG 701
Query: 451 R 451
R
Sbjct: 702 R 702
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 58 MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR 117
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P +VTY +L R G + +A+ ++M AG
Sbjct: 118 QGVVPTIVTYNVVLDVYGRMG--RSWPRIVALLEEMRAAG 155
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 173/394 (43%), Gaps = 53/394 (13%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+IY + V+ ++Y L+N + H + V + KLG + ++N L+
Sbjct: 125 SIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL 184
Query: 335 CLAGNTVLAQEIYGEVKHLEAKG------------------------------VLKLD-- 362
C+ G V A E ++ ++ ++G +++LD
Sbjct: 185 CIEGRIVEAME---QLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCE 241
Query: 363 --VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V +YS I+ + A+ + M S G++P +T++SLI N+G +QA L
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F+EML+ +P+ +IL+ A + A +F Q+A+ D + I
Sbjct: 302 FKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK----MIQIAMEPDIVTYSSLIH 357
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+ K S+ + + N S + +P T++I + C ++++N
Sbjct: 358 GV---CKSSLWKESSTLLNEMLSR-----NIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M GL PN +++ L+D ++ A ++ IM G +PDV++Y IK +S+R
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ +A LF+EM H + PN +T+ TL+ + G
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 39/357 (10%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K M +L ++ SY+I++ + C L E H+ + G+ V TY++++
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLC---KNRLVNEAVDLFYHMRSIGI-SPTVVTYNSLIYG 288
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ W+ A + ++ML + P+ +T+S L++A G+V +A+ +F +M+Q EP+
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Query: 433 SQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ L+ ++ + + L R+ ++ D +S +
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS-----EA 403
Query: 488 QSITNT-------PNFVP----------NSHYSSFDKRFSF------KPTTTTYNILMKA 524
QSI N PN V +S K F P +YNIL+K
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463
Query: 525 CCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C K L +EM GL+PN I+ T LI +G A ++ K M G PD
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ Y+T + + L +A +LFE +K Q++PN V LL + G L + ++
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 150/351 (42%), Gaps = 35/351 (9%)
Query: 262 IIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
IID +C + + + A+ + +RS ++ + +NSL+ N+ K ++K M +
Sbjct: 250 IID--SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
+ D+ +++IL+ A C G + A ++G++ + ++ D+ TYS+++ +
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI----AMEPDIVTYSSLIHGVCKSS 363
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
W+ + + +MLS + P+ +T+S ++ G+V +A + M++ G PN N
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423
Query: 438 ILLQACVEACQFDRAFRLFR------------SWTLSKTQVALGEDYDGNTDRISNMEHK 485
L+ Q D A ++F S+ + E D M HK
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 486 D--KQSITNTPNFV-------PNSHYSSFDKRFSF--KPTTTTYNILMKACCTDYY--RV 532
SIT+T P + F K S P TY+ L+ C +
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
AL ++ L PNH+ IL+ +G +E A ++ + + + PDV
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 128/333 (38%), Gaps = 53/333 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ +Y+ M+ GV + + IL+ C L + G++ L K + T++
Sbjct: 123 VVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG----FKPSIITFN 178
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ A++ + ++S G P T + ++N G A+ ++M++
Sbjct: 179 TLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL 238
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
CEP +I++ + + + A LF
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM---------------------------- 270
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
+ PT TYN L+ C + + L EM +
Sbjct: 271 -------------------RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++IL+DA G V AL + M + M PD+V Y++ I +S K++ +L
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
EM I+P++VT+ + + G + E Q
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++PT T+ +++ C A+ M +M + P +S++I+ID+ + V A
Sbjct: 204 GYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEA 263
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR G+SP VV Y + I S + KQA LF+EM + ++P++VT+ L+ A
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 628 RSRYGSLHEVQQCLAVYQDM 647
+ G V + L+V+ M
Sbjct: 324 LCKEGV---VLEALSVFGKM 340
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 12/249 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIY 279
+ F V K+ ++ AL + + P++ ++I G+C + +S +
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIH--GVCKSSLWKESSTLL 372
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S+N+ ++ F+ ++V + + M + G+ ++ +YN L+ CL
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A++++ + + KG DV +Y+ ++K + ++ A ++ ++M G+TPN
Sbjct: 433 SQMDEARKVFDIMVN---KGCAP-DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT ++LI+ AG A LF++M GC P+ + LL + D A LF
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 458 SWTLSKTQV 466
+ L K+Q+
Sbjct: 549 A--LKKSQL 555
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D++ F +V F KK + A + + PN+ +++D + ++R
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++ + ++ ++ +N L+ + + +++ M G+ + ++ L+ C
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+E++ K + + G D+ TYST++ F AL + E + + +
Sbjct: 501 QAGRPYAAKELF---KKMGSHGCPP-DLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
PN + L+ AG +E A LF + +P+
Sbjct: 557 PNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 158/386 (40%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L ++
Sbjct: 278 MVDRAFEMVRNLELKGSE------------------------------------------ 295
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 296 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + Q L ++ + + G
Sbjct: 411 ATLCKNG---KADQALEIFGKLGEVG 433
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 187/473 (39%), Gaps = 99/473 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 179
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V N L++ N T
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ V++LE KG +
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGS-E 295
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 398
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 399 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +AF L +M+ + P++VTY +L + H ++ + V + M G
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAINVLESMVGNG 538
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+C + +E ++HL E M++ G P+ C L++ +A R+ L K
Sbjct: 99 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQ 155
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKA 524
Y+ + M D + D+ S F P T TYNI++ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDAT-------------RVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C+ AL +N++ + P I++TILI+A G V+ AL+++ M G+ PD
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ Y T I+ + + +AF + ++ +P++++Y LLRA G E ++ +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMT 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ + ++G + +SYN + A +G+ + A + + + + G+ D TY++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM---ILEMMSNGI-DPDEITYNS 478
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A ++ DM S P+ +T++ ++ A +E A+++ E M+ G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 429 CEPNSQCCNILLQA 442
C PN +L++
Sbjct: 539 CRPNETTYTVLIEG 552
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L LE+ N G+ D +YN ++ C G A E+ +++ E V
Sbjct: 458 LHMILEMMSN----GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE----FHPSVV 509
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F A + A+ V E M+ G PN T++ LI AG +AM L ++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 425 LQ 426
++
Sbjct: 570 VR 571
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 38/372 (10%)
Query: 270 GDYMKSR-----AIYEDLRSQNVTLNIYVFNSLM------NVNAHDLKFTLEVYKNMQKL 318
G +M R A +D+R + ++ +N ++ N +A+ L+ +E +K M+
Sbjct: 111 GFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKAS 170
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
GV D+ SY+ILL A +G A ++ + D+ TY+ ++ +
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALFSAM-------TCSPDIMTYNVLMDGYCKIGQ 223
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + +++L AG PN T+S +IN VE+A +F +M+++ C PN+ N
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ +A + A +LF + + Y+ D + K + + +
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATI-VTYNTLIDSLC----KKRGGVYTAVDL-- 336
Query: 499 NSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTI 553
F+K PT TYN L++ C D R+ M +EM +PN I+++I
Sbjct: 337 ------FNKLEGAGLTPTIVTYNSLIQGFC-DARRLSEAMQYFDEMEG-KCAPNVITYSI 388
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID ++ A + L+ M+ G +P VV Y I + LK A FE+MK
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 614 IQPNLVTYITLL 625
PN V + TL+
Sbjct: 449 CAPNTVIFNTLI 460
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 163/394 (41%), Gaps = 42/394 (10%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
MK+ + DL S ++ L+ + M AH L + D+ +YN+L+
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRM-AEAHAL---------FSAMTCSPDIMTYNVLMD 216
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C G T AQ + E+ K + +VFTYS I+ + + A +V M+ +
Sbjct: 217 GYCKIGQTYEAQSLMKEI----LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDR 451
PN +T+++LI AG++E A+ LF EM + GC+ N L+ + C +
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 452 AFRLF---RSWTLSKTQVALGEDYDGNTD--RISN-MEHKDKQSITNTPNFVPNS----- 500
A LF L+ T V G D R+S M++ D+ PN + S
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDG 392
Query: 501 ---------HYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
+ + K + PT TY L+ C AL+ +M+ G +PN
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + LID + L++L M +G PDV+ Y I + R++ A LF+
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M PN+ T+ L+R + E + L
Sbjct: 513 GM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+ +++ F A+ V DM S+G+ PN T ++L+ G +
Sbjct: 26 GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 85
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG------- 469
A+ LF EM P S NILL+ A + A + S + VA G
Sbjct: 86 ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145
Query: 470 ----EDYDGNTDRISNMEHKDKQSITNTPNF---------------VPNSHYSSFDKRFS 510
E+ N + K+ ++ P+ + +H + +
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH--ALFSAMT 203
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TYN+LM C Y ++LM E+ G PN +++I+I+ VE A
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ M E P+ V + T I ++ L+ A LF EM+ + +VTY TL+
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLI 320
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 31/303 (10%)
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A+ AL++ +++L+ PN T++ LI G + QA+ +F +M +G PN+
Sbjct: 10 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 69
Query: 436 CNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNT-DRISNMEHKD 486
N LL E Q A +LFR + S + G G D +++++
Sbjct: 70 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMR 129
Query: 487 KQS---ITNTPNFV------PNSHYSSFDKRFSF---------KPTTTTYNILMKACCTD 528
K S T T N V N + ++ F +P +Y+IL+ A +D
Sbjct: 130 KSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSA-LSD 188
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
R+ + SP+ +++ +L+D G A ++K + + G P+V Y+
Sbjct: 189 SGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 248
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + ++++A+ +F +M PN VT+ TL+ + G L + + ++ +M
Sbjct: 249 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA---IKLFAEME 305
Query: 649 KAG 651
K G
Sbjct: 306 KIG 308
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFT 308
PN T+I G C M AI + ++ I +N+L++ +
Sbjct: 276 PNAVTFNTLI--AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ ++ G+ + +YN L++ C A A + + E++ G +V TYS
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-----GKCAPNVITYSI 388
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K EDM + G TP +T+ LIN G ++ A+ FE+M AG
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF 456
C PN+ N L+ +A + + RL
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLL 476
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VCGICGDYMKS 275
VP A + F + F K L A++ + +K + T+ID +C G +
Sbjct: 275 VPNA-VTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ L +T I +NSL+ +A L ++ + M+ ++ +Y+IL+
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDG 392
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +E ++ ++A G V TY ++ F + AL E M AG
Sbjct: 393 LC---KVRRMKEAAKTLEDMKAHGYTP-TVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PNT+ +++LI+ A + L M GC+P+ N L+ A + + A
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508
Query: 454 RLF 456
RLF
Sbjct: 509 RLF 511
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 49/225 (21%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRA-IY 279
+ + + ++ F R L A++ +D + +PN+ +ID G+C MK A
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILID--GLCKVRRMKEAAKTL 406
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
ED+++ T + + L+N +LK L ++ M+ G A
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC----------------A 450
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
NTV+ ++T++ A+ L++ M + G P+
Sbjct: 451 PNTVI-----------------------FNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
IT++ LI+ +A VE A LF+ M C PN N L++
Sbjct: 488 VITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRG 529
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 189/427 (44%), Gaps = 55/427 (12%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
+I+F N + + KK D+ A + K P + II+ G C GD+
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN--GFCKKGDFKAIDR 295
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ S+ +T+N+ V+N++++ + H +K +E + M + G D+ +YN L+
Sbjct: 296 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK-AVETIEGMIECGCKPDIVTYNTLISGS 354
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A ++ ++ KG++ + F+Y+ ++ + + A +M G
Sbjct: 355 CRDGKVSEADQL---LEQALGKGLMP-NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH 410
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+ +L++ AG V+ A+ + E+ML+ G P++ NIL+
Sbjct: 411 KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG------------ 458
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVPNSHYSSFD 506
L + + L ++ L E D QS+ T F+ N +
Sbjct: 459 LCKKFKLPAAKLLLAEMLD--------------QSVLPDAFVYATLVDGFIRNGNLDEAR 504
Query: 507 KRFSF------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
K F P YN ++K C A+ +N M+ L+P+ +++ +ID
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+++GA ++ + M + P+VV YT+ I R L ++ +F EM+ + PN+
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624
Query: 619 VTYITLL 625
VTY L+
Sbjct: 625 VTYSILI 631
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 175/432 (40%), Gaps = 60/432 (13%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
T I V G+C G + R + ED Q NI +N+L++ D++ ++ ++
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 266
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + + +Y ++ C G+ + E + ++G L ++V Y+TI+
Sbjct: 267 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLME---MNSRG-LTVNVQVYNTIIDARYKH 322
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A++ E M+ G P+ +T+++LI+ G V +A L E+ L G PN
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ A + +DRA +W + T+ D + + + + T
Sbjct: 383 TPLIHAYCKQGGYDRA----SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR- 437
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+R F P YNILM C + K L+ EM + P+ + L
Sbjct: 438 ------EKMLERGVF-PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK------------VC--------- 593
+D +GN++ A ++ ++ E GM+P +V Y IK C
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Query: 594 --------------VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V+ L A +F EM + +PN+VTY +L+ R G LH +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH---R 607
Query: 640 CLAVYQDMWKAG 651
L ++++M G
Sbjct: 608 SLKIFREMQACG 619
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 50/313 (15%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
++ F YS+++K+ A ++ + V E+M ++P S +I A +++GLVE+A+ L
Sbjct: 92 INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALEL 151
Query: 421 FEEMLQAGCE-PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ +L+ P+ CN LL V+ + + A +L+ + DG DR
Sbjct: 152 YYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML----------EIDGAGDRC 201
Query: 480 ----------------SNMEH-----KDKQSITNTPNFV-PNSHYSSFDKRF-------- 509
+E +D+ PN + N+ + K+
Sbjct: 202 VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGL 261
Query: 510 -------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
F PT TY ++ C D+ + L+ EM + GL+ N + +IDA
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G++ A++ ++ M E G PD+V Y T I R ++ +A L E+ + PN +
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381
Query: 621 YITLLRARSRYGS 633
Y L+ A + G
Sbjct: 382 YTPLIHAYCKQGG 394
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 132/302 (43%), Gaps = 22/302 (7%)
Query: 267 GICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + ++ + ++ Q+V + +V+ +L++ + +L ++++ + G+
Sbjct: 458 GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP 517
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ YN ++K C G A +K K L D FTYST++ + A
Sbjct: 518 GIVGYNAMIKGYCKFGMMKDAMACINRMK----KRHLAPDEFTYSTVIDGYVKQHDLDGA 573
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ +M+ PN +T++SLIN G + +++ +F EM G PN +IL+ +
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633
Query: 443 -CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C EA D A F ++K + D N ++ ++I+ N +
Sbjct: 634 FCKEAKLIDAA-SFFEEMLMNK---CVPNDVTFNY-LVNGFSKNGTRAISEKGNEFQENK 688
Query: 502 YSSFDKRF------SFKPTTTTYN-ILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTI 553
S F F + P + YN IL+ C +R L N+M + G P+ +S+
Sbjct: 689 QSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA 748
Query: 554 LI 555
L+
Sbjct: 749 LL 750
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 35/345 (10%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+++ ++ M GV + SY +++ C GN + + G + +G + +D
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGG---MIERGFV-VDNA 238
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S IV+ F + + AL G+ PN I ++ +I G V+QA + EEM
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM 298
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---------RSWTLSKTQVALGEDYDGN 475
+ G +PN L+ + ++AFRLF + L+ T + G D
Sbjct: 299 VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEK 358
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK 533
+R + + K+ P T TY L+ C ++ R
Sbjct: 359 MNRAEMLLSRMKEQ--------------------GLAPNTNTYTTLIDGHCKAGNFERAY 398
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LMN M G SPN ++ ++D G V+ A ++LK +G+ D V YT I
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ +KQA LF +M IQP++ +Y TL+ R + E +
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 21/284 (7%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+VK FA+ + A+++ +M + G+ P+T T + ++ GLVE A +LF+EM G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN +++ V C+ R W + G D T + E +K
Sbjct: 198 VQPNCVSYRVMV---VGYCKLGNVLESDR-WL--GGMIERGFVVDNATLSLIVREFCEKG 251
Query: 489 SITNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
+T + +RF +P + +++ C +A ++ EM G
Sbjct: 252 FVTRALWYF---------RRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302
Query: 544 LSPNHISWTILIDACGGSGNVEGALQI-LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
PN + T LID G E A ++ LK++R + P+V+ YT I R +++ +A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L MK + PN TY TL+ + G+ + + V +
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNE 406
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYED-----LRSQNVTLNIYVFNSLMNVNAHDL 305
SPN+ I+D G+C G ++ + + L + VT I + + ++
Sbjct: 410 SPNVCTYNAIVD--GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE---HCKQAEI 464
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K L ++ M K G+ D+ SY L+ C ++ + E G++ + T
Sbjct: 465 KQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF---GLVPTNK-T 520
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ + ++ALK M G ++IT+ +LI+ +++A L++ M+
Sbjct: 521 YTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMI 580
Query: 426 QAGCEP 431
+ G P
Sbjct: 581 EKGLTP 586
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 236 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 295 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 456
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 40/409 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 136 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 195
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 196 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 255
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
Y++++ AGN A++++ + KGV + V TY++++ ++ K+
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFS---SMVGKGVPQSTV-TYNSLMSFETS---YKEVSKI 308
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M + + P+ ++++ LI A A E+A+ +FEEML AG P + NILL A
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN-FVPNSHYSS 504
+ ++A +F+S DRI D S T + +V S
Sbjct: 369 SGMVEQAKTVFKSM---------------RRDRI----FPDLWSYTTMLSAYVNASDMEG 409
Query: 505 FDKRF------SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+K F F+P TY L+K A D ++ + +MR G+ N T ++D
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
A G N AL K M G+ PD A + + L++A L
Sbjct: 470 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 162/397 (40%), Gaps = 64/397 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLG 319
+I G G++ + + L T N+ + +LM K +++ MQ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ E E K LK D Y ++ ++ A +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVF-ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV M+ GV +T+T++SL++ + ++ ++++M ++ +P+ +L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++A A + + A +F E D
Sbjct: 328 IKAYGRARREEEALSVFE------------EMLDAGV----------------------- 352
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + MR + P+ S+T ++ A
Sbjct: 353 ------------RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + K ++ DG P++V Y T IK ++ +++ ++E+M+ I+ N
Sbjct: 401 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Query: 618 LVTYITLLRARSR---YGSLHEVQQCLAVYQDMWKAG 651
T++ A R +GS L Y++M G
Sbjct: 461 QTILTTIMDASGRCKNFGS------ALGWYKEMESCG 491
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ +P+ +TY +L+ E ++ D
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 169/426 (39%), Gaps = 25/426 (5%)
Query: 208 NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCG 267
+LA R+ I P + +L VR F + LR D+ +P++ I +++ G
Sbjct: 86 SLAARHR-IPPPSALLLSKLVRRFSSPAEAAGFLR--DSLASGAPAPDISIFNSLLTALG 142
Query: 268 ICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG--VMAD 323
G+ ++ +R +V ++ + L+N + + L+V M G V D
Sbjct: 143 RAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPD 202
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+A N ++ C G L Q I + + + TY+ + F MA
Sbjct: 203 IAILNTVVDGLCKIGR--LQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMAC 260
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP--NSQCCNILLQ 441
K+ M GV PN IT +++I G V A+ F E E N+ + L
Sbjct: 261 KIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLAS 320
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + D A LF D+ D + M +T +
Sbjct: 321 AFLHCNNVDMAMELFHEMA----------DHGHRPDAV--MYFTMISGLTQAGRLLDACT 368
Query: 502 YSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
++ K+ FK YNIL+ C + L+ EM+ VGL P+ ++ L+
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G+ ++L M +DG P VV + T + ++ + +A +F M +IQPN V
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTV 488
Query: 620 TYITLL 625
Y TL+
Sbjct: 489 IYNTLI 494
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 159/384 (41%), Gaps = 63/384 (16%)
Query: 254 PNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNV---TLNIYVFNSLMNV--NAHDLKF 307
P++ I T++D G+C ++ I+ D R ++V N +N L + D+
Sbjct: 201 PDIAILNTVVD--GLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGM 258
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL--EAKGVLKLDVFT 365
++ M+K GV ++ + N ++ C G A E + E + + EA+G + T
Sbjct: 259 ACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG----NAVT 314
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST+ F MA+++ +M G P+ + + ++I+ AG + A M
Sbjct: 315 YSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMK 374
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+AG + +++ NIL+ F R +L ++ L + +G
Sbjct: 375 KAGFKLDAKAYNILIGG------FCRKKKLHEAYELLEEMKGVG---------------- 412
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+P TYN L+ C D+ V L+ M G
Sbjct: 413 -------------------------LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ +++ L+ +G + AL+I + M E + P+ V Y T I +S+ + A
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LF+EM+ + N+ TY LL+
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKG 531
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 152/388 (39%), Gaps = 39/388 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + L S +I +FNSL+ A +L+ E++ +M+ V D+ +Y ILL C
Sbjct: 118 LRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLC 177
Query: 336 LAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSA- 392
+G+ A ++ + + + G + D+ +T+V Q A+ V E M
Sbjct: 178 KSGHVGDALKV---LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVH 234
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G PN +T++ L +A G + A + M + G PN N ++ + A
Sbjct: 235 GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAA 294
Query: 453 FRLFRS----W------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
FR W ++ + +A + N D + H+ + H
Sbjct: 295 LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHE----------MADHGHR 344
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
F+ T L+ AC T M+ G + ++ ILI
Sbjct: 345 PDAVMYFTMISGLTQAGRLLDACTT--------AASMKKAGFKLDAKAYNILIGGFCRKK 396
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A ++L+ M+ G+ PDV Y T + ++ L M QP++VT+
Sbjct: 397 KLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFG 456
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKA 650
TL+ + G + + L +++ M +A
Sbjct: 457 TLVHGYCKAG---KTDEALRIFRSMDEA 481
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+ + H P+ + T+I G + + ++ L+ +N L+
Sbjct: 331 AMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIG 390
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
L E+ + M+ +G+ D+ +YN LL C AG+ E+ G H+ G
Sbjct: 391 GFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLG---HMIDDG 447
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ V T+ T+V + A AL++ M A + PNT+ +++LI+ + V+ A
Sbjct: 448 C-QPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVA 506
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ LF+EM + N N LL+ + ++AF L
Sbjct: 507 IKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELM 545
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E+++ + ++Y +N+L++ A D E+ +M G + ++ L+ C
Sbjct: 404 LLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYC 463
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG T A I+ + EA+ ++ + Y+T++ ++ +A+K+ ++M V
Sbjct: 464 KAGKTDEALRIFRSMD--EAR--IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
N T+++L+ + + E+A L + M + C PN ++L++ E + +R
Sbjct: 520 ANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 169/387 (43%), Gaps = 61/387 (15%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G ++ +Y+ S+ + + + +L+N + +E+ + M+K GV
Sbjct: 135 GLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRP 194
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ YN+++ C G L E G + KG+ +DVFTY++++ F A +Q A
Sbjct: 195 NLIMYNMVVDGLCKEG---LVTEACGLCSEMVGKGIC-IDVFTYNSLIHGFCGAGQFQGA 250
Query: 383 LKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+++ +M + V P+ T++ L++A G+V +A ++F M++ G EP+ CN L+
Sbjct: 251 VRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMN 310
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
W L E +D +R PN +
Sbjct: 311 G----------------WCLRGCMSEAKEVFDRMVER------------GKLPNVI---- 338
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+Y+ L+ C +AL + EM L P+ +++ L+D
Sbjct: 339 ---------------SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLS 383
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SG V +++ MR G +PD++ Y + ++ + L +A +LF+ + I PN+
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443
Query: 620 TYITLLRARSRYGSL---HEVQQCLAV 643
TY L+ + G + E+ Q L+V
Sbjct: 444 TYNILIDGLCKGGRMKAAKEIFQLLSV 470
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 67/411 (16%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N + + GK RD + LR + K PN+ + ++D G+C + + + A + ++
Sbjct: 169 NGLCKMGKTRDAIELLRKME---KGGVRPNLIMYNMVVD--GLCKEGLVTEACGLCSEMV 223
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+ + ++++ +NSL++ A + + + M K V D+ ++NIL+ A C G
Sbjct: 224 GKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMV 283
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ ++G L K L+ DV + + ++ + A +V + M+ G PN I+
Sbjct: 284 AEARNVFG----LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S+LIN +V++A+ L EM Q P++ N LL ++ R+ W
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDG------LSKSGRVLYEWD 393
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
L + A G+ P TYN+
Sbjct: 394 LVEAMRASGQ-----------------------------------------APDLITYNV 412
Query: 521 L----MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L +K C D + AL + G+SPN ++ ILID G ++ A +I +++
Sbjct: 413 LLDDYLKRECLD--KALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G P++ Y I R L +A +L EM PN VT+ L+RA
Sbjct: 471 KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 141/353 (39%), Gaps = 65/353 (18%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
VTL+I++ NSL ++ L F+ V + K G D + L+K CL G T A +
Sbjct: 92 VTLSIFI-NSLTHLGQMGLAFS--VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y H +KG D Y T++ + A+++ M GV PN I ++ +++
Sbjct: 149 Y---DHAVSKG-FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVD 204
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
GLV +A L EM+ G + N L+ A QF A RL ++
Sbjct: 205 GLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLL-------NEM 257
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ ED +P T+NIL+ A C
Sbjct: 258 VMKED---------------------------------------VRPDVYTFNILVDALC 278
Query: 527 TDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ E R V GL P+ +S L++ G + A ++ M E G
Sbjct: 279 K-----LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGK 333
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
P+V++Y+T I + K + +A L EM + P+ VTY LL S+ G
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 20/302 (6%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
HL++KG K + T S + +A V ++ G + T ++L+
Sbjct: 80 HLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLK 139
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +A++L++ + G + C L+ + + A L R + L
Sbjct: 140 GRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIM- 198
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DY 529
Y+ D + K+ + + + TYN L+ C +
Sbjct: 199 YNMVVDGLC------KEGLVTEACGLCSEMVGK-----GICIDVFTYNSLIHGFCGAGQF 247
Query: 530 YRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
L+NEM + P+ ++ IL+DA G V A + +M + G+ PDVV+
Sbjct: 248 QGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNA 307
Query: 589 AIKV-CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ C+R + +A +F+ M PN+++Y TL+ Y + V + L + +M
Sbjct: 308 LMNGWCLRGC-MSEAKEVFDRMVERGKLPNVISYSTLING---YCKVKMVDEALRLLTEM 363
Query: 648 WK 649
+
Sbjct: 364 HQ 365
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 221 DILFCNFVREFGKKRDLVS-ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI- 278
D++ CN + R +S A +D + PN+ T+I+ G C M A+
Sbjct: 301 DVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLIN--GYCKVKMVDEALR 358
Query: 279 -YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL---- 331
++ +N+ + +N L++ + + + ++ + M+ G D+ +YN+LL
Sbjct: 359 LLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYL 418
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
K CL L Q H+ G+ ++ TY+ ++ + A ++ + +
Sbjct: 419 KRECLDKALALFQ-------HIVDTGI-SPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
G PN T++ +IN GL+++A L EM+ G PN+ + L++A +E
Sbjct: 471 KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 185/441 (41%), Gaps = 72/441 (16%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
ALR +D ++ +P ++DV G G + + A+ D+R+ V + + ++++
Sbjct: 202 ALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVI 261
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + +YN LL+ AGN A + ++ +E
Sbjct: 262 AAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRV---LREMEDA 318
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K D TY+ + +A A ++Q A K + M+ G+ PNT T+++++ A NAG V++
Sbjct: 319 GC-KPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDE 377
Query: 417 AMHLFE-----------------------------------EMLQAGCEPNSQCCNILLQ 441
A+ LF+ EM ++GC PN N LL
Sbjct: 378 ALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLA 437
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGED--------YDGNTDRISNMEHKDKQSITNT 493
C + R+ + +V L D Y R + + D+ +
Sbjct: 438 VCGKRGMESYVTRVLEG--MKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAG- 494
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
F P TTYN L+ D+ ++++++M++ G PN +S+
Sbjct: 495 -----------------FAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSY 537
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
++L+ GN G I K + + + P V T + + +RL+ F+E+K
Sbjct: 538 SLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKA 597
Query: 612 YQIQPNLVTYITLLRARSRYG 632
+P+LV ++L ++ G
Sbjct: 598 RGHKPDLVILNSMLSIYAKNG 618
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 56/377 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++++LR + V +N +++V + + +M+
Sbjct: 188 TVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRA 247
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ A AG L E + L+A+G V TY+ +++VF A
Sbjct: 248 AGVEPDGFTASTVIAA---AGRDGLVDEAVAFFEDLKARGHAPC-VVTYNALLQVFGKAG 303
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V +M AG P+ +T++ L + A AG ++A + M+ G PN+ N
Sbjct: 304 NYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYN 363
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A A + D A LF DR+
Sbjct: 364 TIMTAYGNAGKVDEALALF--------------------DRM------------------ 385
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P T TYN++ M + + + ++ EM G +PN ++W L+
Sbjct: 386 ---------KKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLL 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G ++L+ M+ + Y T I R AF +++EM
Sbjct: 437 AVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFA 496
Query: 616 PNLVTYITLLRARSRYG 632
P L TY LL SR G
Sbjct: 497 PCLTTYNALLNVLSRQG 513
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 22/336 (6%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AK 377
G D+ +Y +L A G A ++ E++ +GV V TY+ ++ V+ +
Sbjct: 178 GARLDVRAYTTVLHALSREGRYERALRLFDELRR---EGVAPTRV-TYNVVLDVYGRMGR 233
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
W + + DM +AGV P+ T S++I A GLV++A+ FE++ G P N
Sbjct: 234 SWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYN 293
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
LLQ +A + A R+ R ED D ++ E +
Sbjct: 294 ALLQVFGKAGNYTEALRVLREM----------EDAGCKPDAVTYNELAGSYARAGFYQEA 343
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
+ K P T TYN +M A AL + M+ G P ++ +++
Sbjct: 344 AKCIDTMIGK--GLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVL 401
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G L++L M G +P+ V + T + VC + + E MK +++
Sbjct: 402 GMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVE 461
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+ A R GS +Y +M AG
Sbjct: 462 LCRDTYNTLICAYGRCGSR---ANAFKMYDEMTAAG 494
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 174/426 (40%), Gaps = 40/426 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + TI+ G G ++ A+++ ++ +N ++ + +F LE+
Sbjct: 357 PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N LL C G + +K + ++L TY+T++
Sbjct: 417 LGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCK----VELCRDTYNTLIC 472
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M +AG P T+++L+N + G A + +M G +P
Sbjct: 473 AYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKP 532
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALG------EDYDGNT 476
N ++LLQ A +EA + + +F SW + +T V E +
Sbjct: 533 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAF 592
Query: 477 DRISNMEHKDKQSITNT--PNFVPNSHYSSFDKRF------SFKPTTTTYNILMK--ACC 526
+ HK I N+ + N YS + F P TYN LM A
Sbjct: 593 QEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKS 652
Query: 527 TDYYRVKALMNEMR---------TVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+ + + ++N +R L P+ +S+ +I+ G ++ A ++L M D
Sbjct: 653 NEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIAD 712
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G++P V+ Y T + + +A + M +++P +TY ++ + R +
Sbjct: 713 GVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDA 772
Query: 638 QQCLAV 643
+ LAV
Sbjct: 773 RDFLAV 778
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-LQ 426
+++K + W+ AL + + G + ++ A G + L +EM L
Sbjct: 117 SLLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLP 176
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G + + +L A +++RA RLF D +
Sbjct: 177 PGARLDVRAYTTVLHALSREGRYERALRLF--------------------DEL------- 209
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA---CCTDYYRVKALMNEMRTVG 543
+R PT TYN+++ + RV AL+ +MR G
Sbjct: 210 --------------------RREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAG 249
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + +I A G G V+ A+ + ++ G +P VV Y ++V ++ +A
Sbjct: 250 VEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 309
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ EM+ +P+ VTY L + +R G E +C+
Sbjct: 310 RVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCI 347
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 51/264 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G + ++++++A + G E+A+ LF+E+ + G P N++L
Sbjct: 175 LPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVL--------- 225
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D R+ RSW VAL D R + +E
Sbjct: 226 DVYGRMGRSW---PRVVALLADM-----RAAGVE-------------------------- 251
Query: 510 SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T + ++ A D A +++ G +P +++ L+ G +GN A
Sbjct: 252 ---PDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEA 308
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L++L+ M + G PD V Y R+ ++A + M + PN TY T++ A
Sbjct: 309 LRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTA 368
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
YG+ +V + LA++ M K G
Sbjct: 369 ---YGNAGKVDEALALFDRMKKNG 389
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I P IL + F K R L RA+ K P++ I +++ + G Y K+
Sbjct: 565 IFPSWVILRTLVIANF-KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKA 623
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL------------GVMAD 323
++E + ++ ++ +NSLM++ A + E K + +L + D
Sbjct: 624 MEMFESIEQLGLSPDLITYNSLMDMYAKSNE-PWEAEKILNRLRSSQSQQQQQQQQLKPD 682
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYN ++ C G AQ + E + A GV V TY T+V +A + + A
Sbjct: 683 VVSYNTVINGFCKEGLIKEAQRVLSE---MIADGVAPC-VITYHTLVGGYASREMFAEAR 738
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+ + P +T+ ++++ A E A + +A + + L A
Sbjct: 739 EVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEADTNSDEKLLGA-LTAR 797
Query: 444 VEACQFDR 451
+E+ QF R
Sbjct: 798 IESAQFGR 805
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKV 592
AL+ R G + + +++ A G G + +L M G DV AYTT +
Sbjct: 133 ALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHA 192
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R R ++A LF+E++ + P VTY +L R G + +A+ DM AG
Sbjct: 193 LSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMG--RSWPRVVALLADMRAAG 249
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 166/404 (41%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 127 PDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + + D+ YN ++ A C L E YG + KG+ DV TY+T+
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMC---KYQLVSEAYGLFSEMAVKGI-SADVVTYNTL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + PN T++ L++A G V++A + ML+A
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ + L+ + +A +F + +L
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL---------------------------- 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C + +AL EM + P
Sbjct: 333 -------------------MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LID SG + ++ MR+ G DV+ Y++ I ++ L +A +LF
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+MK +I+PN+ T+ LL + G L + Q+ V+QD+ G
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE---VFQDLLTKG 474
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 170/408 (41%), Gaps = 62/408 (15%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ P++ + TIID +C + S A ++ ++
Sbjct: 172 NGVCKIGDTRAAIKFLRKIDG---RLTKPDVVMYNTIID--AMCKYQLVSEAYGLFSEMA 226
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +N+L+ LK + + M + ++ +YNIL+ A C G
Sbjct: 227 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K DV TYST++ + + A V M GVTP+ T+
Sbjct: 287 EAKSVLA----VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN +V++A++LF+EM Q P + L+ ++ R+ W
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC------KSGRISYVW-- 394
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
D I M + + + TY+ L
Sbjct: 395 ---------------DLIDEMRDRGQPA------------------------DVITYSSL 415
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + R AL N+M+ + PN ++TIL+D G ++ A ++ + + G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+V Y I + L++A ++ +M+ PN T+ T++ A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 23/281 (8%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
LE KG+ + D+ T + ++ F V +L G P+T+T ++LI G
Sbjct: 85 LELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQVALGE 470
V++A+H +++L G + N L+ + A + R L+K V +
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVM-- 201
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACCT- 527
Y+ D + + + + Y F + TYN L+ C
Sbjct: 202 -YNTIIDAMCKYQ-------------LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIV 247
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
L+NEM ++PN ++ IL+DA G V+ A +L +M + + PDV+ Y
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+T + +K+A +F M + P++ TY L+
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 121/248 (48%), Gaps = 11/248 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC+ P I + + + ++ A ++A +P+++ +I+ G C + M
Sbjct: 298 ACVKPDV-ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 274 KSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ ++++ +N+ I ++SL++ + + + ++ M+ G AD+ +Y+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G+ A ++ ++K E ++ ++FT++ ++ + A +V +D+
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L+ G N T++ +IN GL+E+A+ + +M GC PN+ ++ A + +
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 450 DRAFRLFR 457
D+A +L R
Sbjct: 531 DKAEKLLR 538
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P + ++ID G+C G + +++R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRISYVWDLIDEMRD 402
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++SL++ N H L + ++ M+ + ++ ++ ILL C G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGH-LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG L+V+TY+ ++ + AL + M G PN T+
Sbjct: 462 DAQEVFQD---LLTKGY-HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
++I A ++A L +M+ G
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMK--ACCTDYYRVKALMNEM 539
H SI N + V S F++ + P +N ++ A Y +L + +
Sbjct: 31 HSQPPSIQNVDDAV-----SQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I+ ILI+ G + +L + + G PD V T IK ++
Sbjct: 86 ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K+A +++ Q N V+Y TL+ + G
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 209/482 (43%), Gaps = 52/482 (10%)
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
E ++++Q V P C++ AD+ V+ GK + + AL + K
Sbjct: 113 EMWKMIQEMVRSP--------TCVIGPADL--SEVVKILGKAKMVNKALSVFYQIKSRKC 162
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN------VTLNIYVFNSLMNVNAHDLK 306
P ++I + G + K +Y ++ ++ +T ++ V ++ + + D
Sbjct: 163 KPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLV-SAFVKLGRDD-- 219
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + ++ M+ G+ Y LL +G+ ++ G V+ ++ KG VFTY
Sbjct: 220 YAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD----EKALGLVQEMKDKGCAPT-VFTY 274
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K + + A V +ML G P+ + ++LIN AG +E A+ LF++M
Sbjct: 275 TELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRS 334
Query: 427 AGCEPNSQCCNILLQACVE----ACQFDRAFRLFRSWTLSKTQVALGEDYDG--NTDRIS 480
C PN N +++A E A + F ++ ++ + DG T+R+
Sbjct: 335 LKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVE 394
Query: 481 N----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
+E D++ P S ++ K ++ + L + C R+ A+M
Sbjct: 395 KALLLLEEMDEKGFPPCPAAY-CSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453
Query: 537 -----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
NEM+ +G +P+ ++ L+ +G +E A L+ M E+G
Sbjct: 454 IKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGC 513
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PD+ ++ + R+ R +QA +F +MK I+P+ V+Y T+L + SR G E +
Sbjct: 514 TPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAK 573
Query: 640 CL 641
+
Sbjct: 574 LM 575
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 40/402 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A+R +D K + P I T++ + GD K+ + ++++ + ++ + L+
Sbjct: 221 AIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDE-KALGLVQEMKDKGCAPTVFTYTELIK 279
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ ++ V+ NM K G D+ N L+ AG A +++ +++ L+
Sbjct: 280 GLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAP 339
Query: 358 VLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+V TY+T++K ++K W+ E M + GVTP++ T+S LI+
Sbjct: 340 ----NVVTYNTVIKALFESKAPASEAASWF-------EKMKANGVTPSSFTYSILIDGFC 388
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
VE+A+ L EEM + G P L+ A +A +++ A LF + L
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF---------LELK 439
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCT 527
E+ ++ RI + K+ P+ F+ K+ P YN LM
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGR-----PSEAVDLFNEMKKIGCNPDVYAYNALMSGLVR 494
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A + M G +P+ S I+++ +G E A ++ M++ + PD V+
Sbjct: 495 AGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVS 554
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y T + RS ++A L EM + + +TY ++L A
Sbjct: 555 YNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 166/401 (41%), Gaps = 43/401 (10%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS----LMNVNAHDLKFTLEVYKNMQK 317
++ + G K+ +++ ++S+ +NS LM H+ E+Y M
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEK--IHELYHEMCN 194
Query: 318 LG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--- 373
G D +Y++L+ A G A ++ E+K A G L Y+T++ ++
Sbjct: 195 EGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMK---ANG-LHPTAKIYTTLLAIYFKS 250
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
D K AL + ++M G P T++ LI +G VE A +F ML+ GC+P+
Sbjct: 251 GDEK----ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDV 306
Query: 434 QCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
N L+ +A + + A +LF RS + V NT + E K
Sbjct: 307 VLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTY------NTVIKALFESK----- 355
Query: 491 TNTPNFVPNSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
P S +S+ ++ P++ TY+IL+ C KA L+ EM G
Sbjct: 356 ------APASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFP 409
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P ++ LI+A G + E A ++ ++E+ Y IK + R +A L
Sbjct: 410 PCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDL 469
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
F EMK P++ Y L+ R G + E L ++
Sbjct: 470 FNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEE 510
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + +A + K++ + I +I G CG ++
Sbjct: 409 PPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVD 468
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +++ ++Y +N+LM+ V A ++ + M++ G D+ S+NI+L
Sbjct: 469 LFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLA 528
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E++ ++K ++K D +Y+TI+ + + ++ A K+ +M S G
Sbjct: 529 RTGRPEQATEMFMKMKD----SLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFE 584
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 585 YDHITYSSILEA 596
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 36/379 (9%)
Query: 289 LNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
L I +N+L+N A +F L +VY M + V ++ +YN ++ C GN A
Sbjct: 181 LIIGCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ + L D FTY++++ + K A KV +M G N + ++
Sbjct: 238 NQYVSKI----VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------ 457
LI+ A +++AM LF +M C P + +L+++ + + A L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 458 ------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------- 503
++T+ + ++ + + M K T N + N +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 504 ---SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ P T TYN L+K C ++ ++ ++N+M + P+ +++ LID
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+ ++ + PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 620 TYITLLRARSRYGSLHEVQ 638
Y L+ + G + E
Sbjct: 534 MYTALIDGYCKAGKVDEAH 552
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 53/410 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN----VNAHDLKF 307
PN+ +I+ G C M A+ E + S+ ++ N +N L+ N H
Sbjct: 391 PNVITYNALIN--GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK--- 445
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ V M + V+ D+ +YN L+ C +GN A Y + + +G++ D +TY+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVP-DQWTYT 501
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ +K + A + + + GV PN + +++LI+ AG V++A + E+ML
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 428 GCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
C PNS N L+ C + +L + L + V +G +TD I + H+
Sbjct: 562 NCLPNSLTFNALIHGLCADG-------KLKEATLLEEKMVKIGLQPTVSTDTI--LIHR- 611
Query: 487 KQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ +F + YS F + S KP TY ++ C + + A +M +MR
Sbjct: 612 ---LLKDGDF--DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ +++ LI G G A +LK MR+ G P + + IK + K KQ
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 603 FS------------------LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
S L E+M + + PN +Y L+ G+L
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 43/373 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ V E M S ++PNT T++ LI + V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E K PN V + + +K S P + T+N
Sbjct: 518 DLFDSLEQKGVN-----PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C D +A L +M +GL P + TILI G+ + A + M G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL A + +M+ + P+L TY +L++ YG L +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTN 689
Query: 639 QCLAVYQDMWKAG 651
V + M G
Sbjct: 690 FAFDVLKRMRDTG 702
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS-------PNHISWTILID 556
D+RF +K YN L+ + L++EM+ V + PN ++ +++
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLAR-----FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GNVE A Q + + E G+ PD YT+ I + K L AF +F EM +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 617 NLVTYITLLRA 627
N V Y L+
Sbjct: 287 NEVAYTHLIHG 297
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCL------AGNTVLAQEIYGEVKHLEAK 356
+L+ +V+ +MQ+ G+ +N LL CC A V G + LE+
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
VL I ++ + + V +++L G + + W +I+ GLVE
Sbjct: 835 KVL---------ICGLYKKGEK-ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQA 442
LF M + GC+ +SQ ++L++
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N + +E+ + M + V + SY L+ C GN +A++++ H++ +
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF---DHMQRNEGIS 793
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
++ ++ K A KV +DM+ G P + LI G E+ +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 421 FEEMLQAG 428
F+ +LQ G
Sbjct: 854 FQNLLQCG 861
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 63/365 (17%)
Query: 292 YVFNSLMNVN---AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
Y+ +M +N H +F LEV G ++ +NIL+ C G+ + A+ ++
Sbjct: 195 YLLRRVMKLNQQPGHCWEFYLEVLD----YGYPPNVYLFNILMHGFCKIGDVMNARMVFD 250
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+ ++ L+ V +++T++ + +K + +K M S ++P+ T+S+LIN
Sbjct: 251 EI----SRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGL 306
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
VE+A LF+EM + G PN L+ + + D A R F
Sbjct: 307 CKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIM--------- 357
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-- 526
KD+ +P TYN L+ C
Sbjct: 358 ----------------KDR----------------------GIRPDLITYNALINGLCRD 379
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + L+NEM G P+ I++T L+D C G+++ AL+I M E+G+ D VA+
Sbjct: 380 GDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
T I R R++ A + ++M +P+ TY ++ + G +V+ + ++
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG---DVKMGAKLLKE 496
Query: 647 MWKAG 651
M + G
Sbjct: 497 MQRDG 501
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 168/387 (43%), Gaps = 61/387 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+Y+ ++ G C GD M +R +++++ + + ++ FN+L++ + +++
Sbjct: 224 PNVYLFNILMH--GFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGF 281
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ + D+ +Y+ L+ C A ++ E+ + G++ V T++T+
Sbjct: 282 VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEM---GLVPNGV-TFTTL 337
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +AL+ E M G+ P+ IT+++LIN G +++A L EM+ G
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ L+ C + DG+ D S +E KD+
Sbjct: 398 KPDKITFTTLMDGCCK---------------------------DGDMD--SALEIKDRMV 428
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSP 546
+ + L+ C D RV+ ++ +M + G P
Sbjct: 429 ------------------EEGIELDDVAFTALISGLCRD-GRVRDAERMLKDMLSAGHKP 469
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++T++ID G+V+ ++LK M+ DG P VV Y + + ++K A L
Sbjct: 470 DDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLL 529
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGS 633
M + ++ PN +T+ LL ++GS
Sbjct: 530 HAMLNMEVVPNDITFNILLDGHCKHGS 556
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 156/377 (41%), Gaps = 52/377 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++D+ + + ++Y++ ++ DL E+ M+ G ++ YN+L+ C
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E G K L K LK DV TY T+V + +++ L++ ++ML +
Sbjct: 274 KKQKV---WEAVGIKKDLAGKE-LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFS 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ SSL+ G VE+A++L + + + G PN N L+ + + FD A L
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL 389
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKR 508
F DR+ I PN V S D
Sbjct: 390 F--------------------DRMGK--------IGLCPNDVTYSILIDMFCRRGKLDTA 421
Query: 509 FSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF KP+ YN L+ C D ++LM EM L P +++T L+
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + AL++ M G+ P + +TT + R+ ++ A LF EM + ++PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541
Query: 618 LVTYITLLRARSRYGSL 634
VTY ++ G++
Sbjct: 542 RVTYNVMIEGYCEEGNM 558
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 170/392 (43%), Gaps = 24/392 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SPN+++ +ID ++ ++ +++ + + N ++ L+++ L L
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALS 423
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYST 368
M +G+ + YN L+ C G+ A+ + E+ K LE V TY++
Sbjct: 424 FLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT------VVTYTS 477
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + AL++ +M G+ P+ T+++L++ AGL+ A+ LF EM +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN N++++ E +AF F + + K V Y + +
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFE-FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ FV H + + + Y L+ C + +AL +M G+
Sbjct: 597 KV-----FVDGLH------KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LID + + L +LK M + G+ PD V YT+ I ++ K+AF ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ M + PN VTY ++ + G ++E +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 150/355 (42%), Gaps = 58/355 (16%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V +E++ +M +G+ D+ Y ++++ C + A+E+ + +EA G
Sbjct: 203 VKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM---IVQMEATGC- 258
Query: 360 KLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+++ Y+ ++ + K W+ A+ +K+D+ + P+ +T+ +L+ E +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWE-AVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGL 317
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ +EML+ P+ + L++ + + + A L + +VA
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK-------RVA----------- 359
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
F P YN L+ + C ++ + L
Sbjct: 360 -----------------------------EFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M +GL PN ++++ILID G ++ AL L M + G+ P V Y + I +
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF 450
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A SL EM + +++P +VTY +L+ Y S ++ + L +Y +M G
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGG---YCSKGKINKALRLYHEMTGKG 502
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 173/438 (39%), Gaps = 55/438 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + + K + ALR Y P++Y T++ G + ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG- 338
+ NV N +N ++ ++ E M + G++ D SY L+ CL G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 339 --------------NTVLAQEIYGEVKH-----------------LEAKGVLKLDVFTYS 367
N L + Y + H + +GV LD+ Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV-DLDLVCYG 651
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ K ++ L + ++M G+ P+ + ++S+I+A + G ++A +++ M+
Sbjct: 652 VLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEH 484
GC PN ++ +A + A L R QV G D T + +M+
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKK 771
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ + N T TYN+L++ C +A L+ M
Sbjct: 772 AVELHNAILKGLLAN---------------TATYNMLIRGFCRQGRMEEASELITRMIGD 816
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ I++T +I +V+ A+++ M E G+ PD VAY T I C + + +A
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 603 FSLFEEMKHYQIQPNLVT 620
L EM ++PN T
Sbjct: 877 TELRNEMLRQGLKPNTET 894
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 129/343 (37%), Gaps = 52/343 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K + + GV ++ YN L+ + C N A+ ++ + + G+ DV TYS
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKI---GLCPNDV-TYSI 407
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +F AL +M+ G+ P+ ++SLIN G + A L EM+
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP L+ + ++A RL+ T
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMT---------------------------- 499
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
VP+ ++F TT + D + L EM + PN
Sbjct: 500 ----GKGIVPSI--------YTF--TTLLSGLFRAGLIRDAVK---LFTEMAEWNVKPNR 542
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ++I+ GN+ A + L M E G+ PD +Y I + + +A +
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + N + Y LL R G L E L+V QDM G
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEA---LSVCQDMGLRG 642
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 175/429 (40%), Gaps = 32/429 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+ + + F ++ L +AL P++Y ++I+ G C GD + ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN--GHCKFGDISAAESL 459
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++ ++ + + + SLM + + L +Y M G++ + ++ LL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG A +++ E+ A+ +K + TY+ +++ + + A + +M+ G+ P
Sbjct: 520 AGLIRDAVKLFTEM----AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T ++ LI+ G +A + + + CE N C LL + + A +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 457 RSWTLSKTQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ L + L G DG+ ++HKD++ + H D+ KP
Sbjct: 636 QDMGLRGVDLDLVCYGVLIDGS------LKHKDRKVFLG---LLKEMH----DR--GLKP 680
Query: 514 TTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y ++ K+ D+ + + M G PN +++T +I+ +G V A +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILC 740
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRS-KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
MR P+ V Y + + + +K+A L + + N TY L+R R
Sbjct: 741 SKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCR 799
Query: 631 YGSLHEVQQ 639
G + E +
Sbjct: 800 QGRMEEASE 808
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+++ + + K D A +D PN +I+ G+C G ++ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN--GLCKAGFVNEAEIL 739
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+R N N + +++ D+K +E++ + K G++A+ A+YN+L++ C
Sbjct: 740 CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ + + GV D TY+T++ + A+++ M G+
Sbjct: 799 RQGRMEEASEL---ITRMIGDGV-SPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIR 854
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
P+ + +++LI+ C AG + +A L EML+ G +PN++
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 187/427 (43%), Gaps = 32/427 (7%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIY 279
DIL ++RE G +D +L + + +P++Y C I+ + C D + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSIVKSCED-VSVWSFL 181
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLA 337
+++ + + ++ FN L+NV + F Y + M+K G + +YN +L C
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A E+ + H+ KGV DV TY+ ++ + + DM + PN
Sbjct: 242 GRFKAAIEL---LDHMNLKGV-NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+++L+N +N G V A L EML G PN N L+ + F A ++F
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 458 ---SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ L T+V+ G DG + F + KR
Sbjct: 358 MMEAKGLIGTEVSYGVLLDG---------------LCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY ++ C + + +A ++NEM G+ P+ ++++ LI+ G ++ A +I+
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVC 462
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+SP+ + Y+T I C R LK+ ++E M P+ T+ L+ + + G
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAG 522
Query: 633 SLHEVQQ 639
+ E ++
Sbjct: 523 KVAEAEE 529
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 186/430 (43%), Gaps = 43/430 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M GV AD+ +YN+L+ C + + + +++ K ++ + TY+T++
Sbjct: 251 LDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR----KRMIHPNEVTYNTLLN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +ML+ G++PN +T+++LI+ + G ++A+ +F M G
Sbjct: 307 GFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIG 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 TEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F + R P Y+ L+ CC
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G +P+H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L ++
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600
Query: 641 LAVYQDMWKA 650
L Q++ A
Sbjct: 601 LKSLQNVPAA 610
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 169/437 (38%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P A C + +G + + A +D K P + +++ G+C G +
Sbjct: 539 ILPNAVSFDC-LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLI 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + L++ ++ + N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 AAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G L + Y+ V A W+ ++ M
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDK 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+T + +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS LS +P+
Sbjct: 773 SFMLYRSMILS--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T Y+I++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDM 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ +M G+S D + V R+ R +++ + EM I P YI LL R
Sbjct: 847 VNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 172/442 (38%), Gaps = 66/442 (14%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+K + PN T+++ G + +R + ++ + ++ N FN+L++ ++ +
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------GE 349
K L+++ M+ G++ SY +LL C LA+ Y G
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 350 VKHLEAKGVLK---------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ L G L D+ TYS ++ F + A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+PN I +S+LI C G +++ + ++E M+ G P+ N+L+ + +A + A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFK 512
R T S + +D + + K +S FD+ +
Sbjct: 530 FMRCMT-SDGILPNAVSFDCLINGYGSSGEGLKA-------------FSVFDEMTKVGHH 575
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TY L+K C + + A + ++ V + + + LI A SGN++ A+ +
Sbjct: 576 PTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSL 635
Query: 571 LKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
M + + PD YT+ I +C + K + E + PN V Y +
Sbjct: 636 FGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMF 695
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G WKAG
Sbjct: 696 KAGQ--------------WKAG 703
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 153/400 (38%), Gaps = 42/400 (10%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C + A+ ++ + +I +++L+N LK E+ + ++G+
Sbjct: 412 GLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSP 471
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ Y+ L+ CC G IY E LE D FT++ +V A A
Sbjct: 472 NGIIYSTLIYNCCRMGCLKETIRIY-EAMILEGN---TPDHFTFNVLVTSLCKAGKVAEA 527
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M S G+ PN +++ LIN ++G +A +F+EM + G P LL+
Sbjct: 528 EEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 443 CVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ A + +S T+ + GN D+ ++
Sbjct: 588 LCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSL------------ 635
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVG-LSPNHISW 551
+ +R S P + TY L+ C V A++ E G L PN + +
Sbjct: 636 -------FGEMVQR-SILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T +D +G + + M + G++ DVV I R ++++ L EM +
Sbjct: 688 TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PNL TY LL Y V +Y+ M +G
Sbjct: 748 QNQGPNLTTYNILLHG---YSKRKHVSTSFMLYRSMILSG 784
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 41/344 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M KLG+ D+ + N ++ G ++ E+ + + +G ++ TY+ ++
Sbjct: 708 QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN-QNQGP---NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + M+ +G+ P+ +T S+I + ++E + + + + G E +
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-DRIS---NMEHK--- 485
N+L+ C + + AF + T +LG D NT D I N H+
Sbjct: 824 RHTFNMLISKCCANGEINWAFDMVNVMT------SLGISLDKNTCDAIVSVLNRNHRFQE 877
Query: 486 --------DKQSIT-NTPNFVP--NSHYSSFDKRFSFK-----------PTTTTYNILMK 523
KQ I+ + ++ N D + +F P + +++
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 524 AC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A C L+ M + L P S+T L+ +GNV AL++ +M G+
Sbjct: 938 ALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKL 997
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
D+V+Y I + AF LFEEMK N+ TY L+
Sbjct: 998 DLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 57/290 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ V + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDM---VNVMTSLGI-SLDKN 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T IV V +Q + V +M G++P + + L+N G ++ A + EEM
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L RS
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEASLLLRSML------------------------ 956
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
+ PT ++ LM C + +AL E+R V
Sbjct: 957 -----------------------KMKLVPTIASFTTLMHLFCKNGNVTEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
GL + +S+ +LI G++ A ++ + M+ DG +V Y +
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMAS 326
CG ++ + + + I F +LM++ + T LE+ M G+ D+ S
Sbjct: 942 CGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVS 1001
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQMALKV 385
YN+L+ C G+ +A E++ E+K G L +V TY +V + + + +
Sbjct: 1002 YNVLITGLCAKGDMAIAFELFEEMKR---DGFLA-NVTTYKALVGGILSQGTEFSGTDII 1057
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+D+L+ G ++++ +IN + HLF
Sbjct: 1058 LKDLLARGFI-TAMSFNHMINFPQQISVNAYLKHLFH 1093
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 158/384 (41%), Gaps = 32/384 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ I + +T N +V N L N H + L+V M + G D+ +YNI++
Sbjct: 183 QQEIADGFEPDQITYNTFV-NGLCQ-NDH-VGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G +E G + + +G L D+ T++T++ + AL + + GV
Sbjct: 240 CKNGQL---EEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGV 295
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+P+ T++ LINA G A+ LFEEM +GC P+ N L+ + +A
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355
Query: 455 LFR---SWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSIT-NTPNFVPNSHYSS 504
L + S ++ + DG RI E D Q I+ N F
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415
Query: 505 FDKRF-------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
DK+ +P TYN ++ C D + ++ M G + +
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI+ +G + AL++L+ MR GM P AY ++ R ++ A SLF EM
Sbjct: 476 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
P+ +TY + R R G
Sbjct: 536 AEVGEPPDALTYKIVFRGLCRGGG 559
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+NV +K VY M G+ D+ ++N L+KA C A A + +
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM---L 112
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++GV D T++T+++ F + + AL+VK ML G + +T + LIN
Sbjct: 113 EEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 171
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G VE A+ ++ + G EP+ N + CQ D + + + V G
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGL---CQNDH---VGHALKVMDVMVQEGH 225
Query: 471 DYDGNTDRI------SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
D D T I N + ++ + I N D+ P TT+N L+ A
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILN----------QMVDR--GCLPDITTFNTLIAA 273
Query: 525 CCTDYYRVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
CT R++ ++ R V G+SP+ ++ ILI+A G+ AL++ + M+ G +P
Sbjct: 274 LCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
D V Y T I +L +A L ++M+ + +TY T++ + + E ++
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 146/342 (42%), Gaps = 33/342 (9%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ AD YN LL L + +Y E + A+G+ K DV T++T++K A
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSE---MGARGI-KPDVVTFNTLMKALCRAH 103
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A+ + E+M S GV P+ T+++L+ G +E A+ + ML+ GC N
Sbjct: 104 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 163
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+L+ C+ R L Q + + ++ D+I+ T
Sbjct: 164 VLING---YCKLGRV-----EDALGYIQQEIADGFE--PDQITYN--------TFVNGLC 205
Query: 498 PNSHYSSFDK------RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
N H K + P TYNI++ C + K ++N+M G P+
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI A +E AL + + + G+SPDV + I + A LFEEM
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K+ P+ VTY TL+ SL ++ + L + +DM G
Sbjct: 326 KNSGCTPDEVTYNTLI---DNLCSLGKLGKALDLLKDMESTG 364
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 55/352 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S+ V + F +LM V ++ L V M ++G A + N+L+ C
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + M+ G
Sbjct: 171 KLGR---VEDALGYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++ ++N G +E+A + +M+ GC P+ N L+ A + + A L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T+ P
Sbjct: 287 ARQVTVK-----------------------------------------------GVSPDV 299
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+NIL+ A C D + L EM+ G +P+ +++ LID G + AL +LK
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M G + Y T I + R+++A +F++M I N +T+ TL+
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD + ++E++++ T + +N+L++ + L L+
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K+M+ G +YN ++ C A+E++ ++ +G+ + + T++T++
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF---DQMDLQGISR-NAITFNTLI 411
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A ++ M+S G+ PN IT++S++ G +++A + E M G E
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A ++ R RI M
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGM------------------RIKGM-------- 505
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 506 ---------------------RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A + M + G P+ ++
Sbjct: 545 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 583
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 6/222 (2%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR ++ K +P+ T+ID G K+ + +D+ S + +N++++
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377
Query: 300 VNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ EV+ M G+ + ++N L+ C A E+ + + ++G
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL---INQMISEG 434
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
L+ + TY++I+ + + A + E M + G + +T+ +LIN AG + A
Sbjct: 435 -LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 493
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ + M G P + N +LQ+ A LFR
Sbjct: 494 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 183/428 (42%), Gaps = 51/428 (11%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K+ DL A +A+ ++ + SP++Y T+I G+C G K+ + +D+++ + +
Sbjct: 170 KRVDL--AEKAFRSALRRRVSPDIYTFNTVIS--GLCRIGQLRKAGDVAKDIKAWGLAPS 225
Query: 291 IYVFNSLMN-----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+ +NSL++ A ++ + K M + G+ ++ +L+ C NT A
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E+K +G+ V TY++++ + +K+ E+M G++PN IT+ ++
Sbjct: 286 VFEEMKQ---QGI-AASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G++ A + M + EP+ NIL+ ++R +
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILID-------------VYRRLGKMEDA 388
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPT 514
+A+ E M K T N + S D K +
Sbjct: 389 MAVKE----------AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYN+L+ A C KA L++EM VGL PNH+++ +I GN++ A +I
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + +VV Y IK + ++ +A L EM + PN +TY T+ G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Query: 633 SLHEVQQC 640
+++ C
Sbjct: 559 YTPDIRGC 566
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 156/373 (41%), Gaps = 38/373 (10%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + + +++ + V D+ ++N ++ C G A ++ K ++A G L
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV---AKDIKAWG-L 222
Query: 360 KLDVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLV 414
V TY++++ K + + + +KE M+ AG++P +T+ LIN C N+
Sbjct: 223 APSVATYNSLIDGYCKKGGAGNMYHVDMLLKE-MVEAGISPTAVTFGVLINGYCKNSN-T 280
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGED 471
A+ +FEEM Q G + N L+ + + +L LS ++ G
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 472 YDG---------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------------RFS 510
G D I M ++ + N + + Y K +
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV-YRRLGKMEDAMAVKEAMAKKG 399
Query: 511 FKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P TTYN L+ D+ L++EM+ G+ + +++ +LI A G V A+
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M E G+ P+ + Y T I+ +K A+ + M+ + + N+VTY ++
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 629 SRYGSLHEVQQCL 641
+ G + E L
Sbjct: 520 CQIGKMDEANDLL 532
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA-C- 558
S+ +R S P T+N ++ C KA + +++ GL+P+ ++ LID C
Sbjct: 181 SALRRRVS--PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238
Query: 559 -GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GG+GN+ +LK M E G+SP V + I ++ A +FEEMK I +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+VTY +L+ G + E + + +D+
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 142/333 (42%), Gaps = 63/333 (18%)
Query: 108 ASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLD 167
AS+++ + SG+ EG+++ V +++++ +LG++P E+ G +LK C++ +
Sbjct: 297 ASVVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGC---VLKGFCKKGMM 350
Query: 168 SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNF 227
+ + G+ E R V+ PDV + Y ++ +
Sbjct: 351 ADANDWIDGMTE----------------RNVE-----PDV---VIYNILI--------DV 378
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R GK D A+ +A K SPN+ +I GD+ + + ++++ + +
Sbjct: 379 YRRLGKMED---AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ +N L+ +++ +++ M ++G+ + +YN +++ C GN A E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I ++ + +V TY+ +K F A + +ML + PN IT+ +
Sbjct: 496 IRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET-- 549
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ E M++ G P+ + C +
Sbjct: 550 --------------IKEGMMEKGYTPDIRGCTV 568
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ +KV +++ ++ A K+ ++ML GV P+ IT+S+L+N + +GL +A+ LFE
Sbjct: 156 VVLYNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFE 215
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSK-TQVALGEDYD--G 474
+M GCEP+ C+ ++ A D+A L+ +W+L T L + Y G
Sbjct: 216 KMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAG 275
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRV 532
N D+ + Y K KP TYN L+ A + +
Sbjct: 276 NYDKCLEV-------------------YQEM-KVLGVKPNVATYNTLLGAMLRSKKHRQA 315
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
KA+ EM++ G+SP+ I++ L++ + E AL + K M+ +GM Y + +
Sbjct: 316 KAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAM 375
Query: 593 CVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQQCL 641
C +A +F EMK QP+ T+ +L+ SR G + EV+ L
Sbjct: 376 CADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGML 425
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F ++ + + L Y K PN+ T++ + +++AI+++
Sbjct: 262 VTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKE 321
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++S V+ + + SL+ V A + L VYK M+ G+ YN LL C G
Sbjct: 322 MKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGY 381
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A EI+ E+K + G + D +T+S+++ +++ + + +M+ +G P
Sbjct: 382 TDRAVEIFYEMK---SSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIF 438
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CC---NILLQACVE 445
+SLI A + + +F+++L G PN CC N+L Q E
Sbjct: 439 VMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTPKE 488
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V + + ++ A+ YD +K S + T+I + + G+Y K +Y++++
Sbjct: 232 MVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLG 291
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V N+ +N+L+ K ++K M+ GV D +Y LL+ A + A
Sbjct: 292 VKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDAL 351
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV-TPNTITWSS 403
+Y E+K G + + Y+ ++ + AD + A+++ +M S+G P++ T+SS
Sbjct: 352 GVYKEMK---GNG-MDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSS 407
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
LI + +G V + + EM+Q+G +P L++ +A + D ++F+
Sbjct: 408 LITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFK 461
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 157/378 (41%), Gaps = 36/378 (9%)
Query: 281 DLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLA 337
++RS + + N ++ ++ + +V+ M + G++ D S+ L+ CC
Sbjct: 139 EMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRD 198
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G +E+ + ++ +G LD T + IV+VF ++ ++ ML G PN
Sbjct: 199 GRM---EEVDALLTVMQGQGFC-LDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPN 254
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +++ I+ V+QA ++ EEM+ G +PN L+ + +RAFRLF
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFL 314
Query: 458 SWTLSKTQVALGEDYDGNTDRISNM------EHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
S + Y N + M E K ++ V
Sbjct: 315 KLIKSSS-------YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ----------GL 357
Query: 512 KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P T TY L+ C + + LMN+MR G PN ++ LID G ++ A +
Sbjct: 358 APNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYK 417
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L++ G+ D V YT I + + A LF M P++ TY TL+
Sbjct: 418 VLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYC 477
Query: 630 RYGSLHEVQ----QCLAV 643
+ + E Q +CLA+
Sbjct: 478 QQRQMEESQKLFDKCLAI 495
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 142/355 (40%), Gaps = 58/355 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ M ++G ++ +Y + C ++ + ++ + AKG LK +V+T++++
Sbjct: 241 ELFRRMLEMGTPPNVVNYTAWIDGLC---KRAYVKQAFYVLEEMVAKG-LKPNVYTHTSL 296
Query: 370 VKVFADAKWWQMALKV-------------------------KED-----------MLSAG 393
+ W + A ++ KE M+ G
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 356
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ PNT T+++LI+ G A L +M + G +PN N L+ + + A+
Sbjct: 357 LAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAY 416
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSF 511
++ R ++ Q G D T + EH + IT + F++
Sbjct: 417 KVLR---MANNQ---GLQLDKVTYTVMITEHCKQGHITYALDL--------FNRMAENGC 462
Query: 512 KPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY L+ C + L ++ + L P ++T +I G AL+
Sbjct: 463 HPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALR 522
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ + M ++G D + Y I + RL++A +L+E M ++ P VT +TL
Sbjct: 523 VFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL 577
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN T+I G C G + + + +R + NIY +N+L++ ++
Sbjct: 358 APNTNTYTTLIS--GHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V + G+ D +Y +++ C G+ A +++ + A+ D+ TY+T
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM----AENGCHPDIHTYTT 471
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + + K+ + L+ + P T++S+I G A+ +FE M+Q G
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF 456
C+ +S L+ + + + A L+
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALY 559
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 60/399 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ S+ + L+ + +L+ + A +
Sbjct: 101 TPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASS 160
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ C AG A I+ K +EA+G+ +V YS ++
Sbjct: 161 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF---KSMEARGLAPNEV-VYSALI 216
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G V A F+EML+AGC+
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ +A GNTD + D S
Sbjct: 277 PDVYTYNILISGFCKA---------------------------GNTDAACGV-FDDMSSS 308
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
+PN V TY L+ C KA + M+ G P+
Sbjct: 309 RCSPNVV-------------------TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDS 349
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+D SG +EG + M G++ +C ++ R+ +A SLF
Sbjct: 350 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC-KANRVDEAVSLFNA 408
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ + P+ Y +++ A + G ++E Q AVYQ+M
Sbjct: 409 IRK-EGMPHPYAYNSIISALIKSGKVNEGQ---AVYQEM 443
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 36/353 (10%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+++IL+ AG + A + E +D+ TY+TIV A K Q A+ +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQET----TTNGCTIDIHTYTTIVDWLAKNKKIQEAVAL 56
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
E + + G TP T+++L+N G +E+A+ L +++ GC P+ L+ +
Sbjct: 57 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 116
Query: 446 ACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+ A++LF+ T+ T + G G + S++ +K S P+ V
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSV-YKTMTSQGCVPDVV 175
Query: 498 PNSH-----------------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
S + S + R P Y+ L+ C AL + +
Sbjct: 176 TLSTMIDGLCKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ +P+ I++ ILID SG+V A M E G PDV Y I ++
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A +F++M + PN+VTY TL+ + L + YQ M + G
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS---LYYQHMKERG 344
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 34/359 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ LA N + QE ++ + A G + TY+ ++
Sbjct: 29 GCTIDIHTYTTIVDW--LAKNKKI-QEAVALMEKITANGCTP-TIATYNALLNGLCKMGR 84
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ A+ + ++ G TP+ +T++SLI+ +A LF+EM G ++ C
Sbjct: 85 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTA 144
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKT---QVALGEDYDG--NTDRISNMEH--KDKQSIT 491
L++ ++A + +A ++++ T V L DG RI K ++
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204
Query: 492 NTPNFVPNSH-----------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRV 532
PN V S + K F P T TYNIL+ C D
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC-TPDTITYNILIDGLCKSGDVAAA 263
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+A +EM G P+ ++ ILI +GN + A + M SP+VV Y T I
Sbjct: 264 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISG 323
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++L +A ++ MK P+ Y +L+ + G L C+ ++ +M ++G
Sbjct: 324 LCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE--GGCM-LFDEMERSG 379
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 164/421 (38%), Gaps = 85/421 (20%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + LAK+ +++E ++E + + G A+ +L +G+ K GR++ +
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKIT-ANGCTPTIATYNAL---LNGLCKM---GRLEEAI 89
Query: 134 GVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEVEMFVGLMEV 180
+L+K+ + G P L DG G +KL K R L V + +
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDV----------------NLAIR-YACIVPRA--- 220
L+ ++P + Q CV PDV A+R + + R
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 221 -DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
++++ + K R + AL KK +P+ +ID G+C GD +RA
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID--GLCKSGDVAAARA 265
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ M + G D+ +YNIL+ C A
Sbjct: 266 FFDE---------------------------------MLEAGCKPDVYTYNILISGFCKA 292
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GNT A ++ ++ +V TY T++ + A + M G P+
Sbjct: 293 GNTDAACGVFDDMSSSRCSP----NVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +SSL++ +G +E LF+EM ++G NSQ L+ +A + D A LF
Sbjct: 349 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFN 407
Query: 458 S 458
+
Sbjct: 408 A 408
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 178/431 (41%), Gaps = 35/431 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN R + + L S+ PN+ T+I+ G K+ ++ ++
Sbjct: 175 FCNEKR----AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMM 230
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + N+ + ++++ A + V++ M GV D +YN L+ G
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-- 288
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + A G LK D +TY +++ + + A + M+ G+ PN +
Sbjct: 289 -WKEVVRMLEEMSAHG-LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
LI+ A G + + L M++ G P+ NI+ A + D A +F +
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 459 WTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPN-FVPNSHYSSF-------- 505
LS V G D R+ + K Q + PN FV NS
Sbjct: 407 QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 506 DKRFSF-------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
K F F +P +N ++ CT +KA L++ M VG P+ IS+T LI
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIG 526
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G ++ A + L +M G+ PD Y T + R+ R+ A+ +F EM I P
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 617 NLVTYITLLRA 627
+VTY T+L
Sbjct: 587 GVVTYSTILHG 597
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 157/353 (44%), Gaps = 40/353 (11%)
Query: 289 LNIYVFNSLMN--VNAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N V N L+ +A L+ +++ K M +LG D+ SYN LLK C N A+E
Sbjct: 127 VNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFC---NEKRAEE 183
Query: 346 IYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E+ H+ A + +V +Y+T++ F A + +M+ G+ PN +T++
Sbjct: 184 AL-ELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYT 242
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++I+ A +V++A +F++M+ G +P++ N L+ + ++ R+ +
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--------KPT 514
+ D + + N++ N+ + RF F KP
Sbjct: 303 GLK-------------------PDCYTYGSLLNYLCNNGRCR-EARFFFDSMIRKGIKPN 342
Query: 515 TTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y IL+ T + L+N M GLSP+H + I+ A ++ A+ I
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M++ G+SPDVV + I + R+ A F +M + + PN+ + +L+
Sbjct: 403 KMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 153/391 (39%), Gaps = 55/391 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ ++ K+ SP++ +ID G + + + ++ V N
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+VFNSL+ + E Y M G+ D+ +N +L C G + AQ +
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL-- 505
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E G + DV +Y+T++ A K + MLS G+ P+ T+++L++
Sbjct: 506 -IDLMERVGT-RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG ++ A +F EML+ G P + +L +F A L+
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL----------- 612
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFKPTTTTYNILMKACC 526
NM KQ N + N S + D+ F L ++ C
Sbjct: 613 ------------NMITSGKQWNIWIYNIILNGLSKNNCVDEAFK----------LFQSLC 650
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ ++++ ++ I+I A SG E A+ + + G+ PDV Y
Sbjct: 651 SKDFQLEI--------------TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + L++ LF M+ PN
Sbjct: 697 CLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 125/328 (38%), Gaps = 57/328 (17%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ +Y+IL+ C G +G L K +++ + ++K DAK
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFG----LILKSGWRVNNIVINQLLKGLCDAKRL 145
Query: 380 QMALKVK-EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA---GCEPNSQC 435
+ A+ + + M G TP+ +++++L+ N E+A+ L M + C PN
Sbjct: 146 REAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
++ Q D+A+ LF +E D+
Sbjct: 206 YATVINGFFTEGQVDKAYNLF-------------------------LEMMDR-------- 232
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
+P TY ++ C R + + +M G+ P++ ++
Sbjct: 233 --------------GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI G + +++L+ M G+ PD Y + + + R ++A F+ M
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG 338
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+PN+ Y L+ + G+L E+ L
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLL 366
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 37/342 (10%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ D+ SYN L+ C GN + A ++ E++ + L + TY+T++
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI----YLFPTIVTYNTLLDGLCRQGEL 425
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++K +M++ G+ P+ +T++ L+N G + A F+EML G E +S
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 440 LQACVEACQFDRAFRL--------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ ++ RAF L F + V G GN + S + K S
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK-MVSDG 544
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHI 549
P++V TY ++ A + + + + EM + GL+P+ +
Sbjct: 545 VIPDYV-------------------TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T+LI G G +E A M+E G+ P+V+ Y + I + +R+ QA++ F EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I PN +Y L+ G+ Q+ L++Y+ M G
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNW---QEALSLYKQMLDRG 684
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 26/335 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ MK+ ++++LRS + I +N+L++ +L+ ++ M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y IL+ C G+ +AQE + E+ H +G L+LD + Y+T ++ + K
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLH---EG-LELDSYAYAT--RIVGELKLGD 494
Query: 381 M--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++E+ML+ G P+ I ++ +++ G +E+A L ++M+ G P+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ A +E + + +F LSK G T + H K + F+
Sbjct: 555 IIHAHLENGRLRKGREIFYE-MLSK-----GLTPSVVTYTVLIHGHAGKGRLERA--FI- 605
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
++S ++ P TYN L+ C +A EM G+ PN S+TILI+
Sbjct: 606 --YFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GN + AL + K M + G+ PD ++ +K
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 45/284 (15%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K L DV + I+++ D A++V M G+ P +T+++L+++ G V+
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
Q + L EM + GC PN N+L+ + +F++A L + +V+
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS-------- 303
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
+ T P Y F+K +L +A +L
Sbjct: 304 -------------AYTYNPLI-----YGYFNK-----------GMLAEAL--------SL 326
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G SP ++ I G + A+Q L M + + PDVV+Y T I R
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L +AF LF+E++ + P +VTY TLL R G L QQ
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 150/358 (41%), Gaps = 29/358 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L V+ M K + D+ + N +L+ L ++++ + EV + +K + TY+T
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILR--ILRDKDLMSKAV--EVYRTMGEFGIKPTIVTYNT 239
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + Q L + +M G PN +T++ LIN + G EQA L EML+ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTL--SKTQVALGEDYDGNTDRISNMEHKD 486
+ ++ N L+ A L L + VA + ++ M
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 487 KQ-SITNTPNFVPN------------------SHYSSFDKRFSFK--PTTTTYNILMKAC 525
+Q S N +P+ + FD+ S PT TYN L+
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + L EM G++P+ +++TIL++ G++ A + M +G+ D
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
AY T I ++ +AFSL EEM P+L+ Y ++ + G+L E + L
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 242 RAYDASKKHLSS---PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+ ++ L+ P++ I ++D G+C G+ ++ + + + S V + + S
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVD--GLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ + + L+ E++ M G+ + +Y +L+ G A + E ++
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE---MQ 611
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG+L +V TY++++ + A +M+ G+ PN +++ LIN N G
Sbjct: 612 EKGILP-NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
++A+ L+++ML G +P+S + LL+ + C+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 118/305 (38%), Gaps = 63/305 (20%)
Query: 354 EAKGVLKLDVFTYSTIVKVFAD-----AKWWQMALKVKE------DMLSAGVTPNTIT-- 400
E++ + F + I+++ A + +W M + D+L G + ++
Sbjct: 106 ESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVK 165
Query: 401 -WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
LI + +VEQ + +F++M+++ P+ + CN +L+ + +A ++R+
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT- 224
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+GE F KPT TYN
Sbjct: 225 --------MGE--------------------------------------FGIKPTIVTYN 238
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ + C + L ++EM+ G +PN +++ +LI+ G E A ++ M +
Sbjct: 239 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT 298
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ Y I L +A SL EEM P + TY + + + G + +
Sbjct: 299 GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 358
Query: 638 QQCLA 642
Q L+
Sbjct: 359 MQQLS 363
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE L + M + +SPDV +++ + +A ++ M + I+P +VTY T
Sbjct: 180 VEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LL + + G +VQQ L + +M + G
Sbjct: 240 LLDSYCKGG---KVQQGLDLLSEMQRRG 264
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 198/453 (43%), Gaps = 67/453 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ L A+ + P++ I T+I++ G DY K+ +++ L+
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + ++NS++N+ KF E + M++ G+M D SY IL+ A +
Sbjct: 123 ASGIAPDKVIYNSMINLYGK-AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKY 181
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--------ADAKWWQMALKVKEDMLSA 392
+ A++++ E+K KG+ +LDV T + ++ V+ A+ +W M+ +
Sbjct: 182 LEAKQVFLEMK---TKGI-QLDVTTCNMMIDVYGKLEMVRDAEELFWSMS-------KTL 230
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDR 451
G+ N +T++++I A L+ +A ++F M + G EPN N +L Q ++
Sbjct: 231 GIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEK 290
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDK-R 508
A RL R M+ + + ++T + +D+
Sbjct: 291 AMRLVR-----------------------KMQQRGIEPNAVTYSTLISIYGKTGKYDRAA 327
Query: 509 FSFKPTTTTY----NILMKACCTDYYR------VKALMNEMRTVGLSPNHISWTILIDAC 558
F FK IL ++ Y R K L+ E++ + P + +IL A
Sbjct: 328 FLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAE 387
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+E A ++ E G + V Y + I++ VR+KR K A +FE M+ P+
Sbjct: 388 ----KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDS 443
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T + LL A YG L +++ +Y DM + G
Sbjct: 444 ETTVVLLAA---YGQLRQLEDAEKLYLDMRERG 473
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 156/329 (47%), Gaps = 18/329 (5%)
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ F++L++ A+ L+ + + M+ G+ D+ ++ L++ + A ++ +
Sbjct: 61 FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSK 120
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K A G+ D Y++++ ++ AK+++ A + +M AG+ P+T++++ LINA A
Sbjct: 121 LK---ASGIAP-DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYA 176
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+ +A +F EM G + + CN+++ + A LF W++SKT LG
Sbjct: 177 ESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF--WSMSKT---LG 231
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCT 527
+ T +K+ + ++ N + + +P TYN + +
Sbjct: 232 IQQNVVTYNTMIKVYKEAELLSEAFNV-----FYYMQNKGGVEPNVITYNTILFLHGLTL 286
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + L+ +M+ G+ PN ++++ LI G +G + A + K +RE G D + Y
Sbjct: 287 QHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQ 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ I V R+ + A L EE+K I P
Sbjct: 347 SMIVVYERAGLVAHAKRLLEELKQPDIVP 375
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P+ YN+++K + + L+ EM L P+ +++ LI G + +E A
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ L+ M G+ PD+V ++T I++ + K +A SLF ++K I P+ V Y +++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ E Q LA +M +AG
Sbjct: 140 YGKAKFYKEAQGLLA---EMKEAG 160
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
PN T+I + G G Y ++ +++ LR + ++ ++ S++ V A +
Sbjct: 304 EPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKR 363
Query: 311 VYKNMQKLGVMADMASYNILLKACCL--AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + +++ ++ + +IL KA L A GE+K + TY +
Sbjct: 364 LLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIK----------ESVTYKS 413
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++++F K + A+ V E+M +G P++ T L+ A +E A L+ +M + G
Sbjct: 414 MIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERG 473
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
C + +L+ +A + A +F + L
Sbjct: 474 CTLEKEVHFQMLKLYGDARKIREAEDMFAALKLE 507
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 215/534 (40%), Gaps = 97/534 (18%)
Query: 196 RIVQLCVNKPDVNLAIRYACIVPRADILFCNFVRE-----FGKKRDLVSALRAYDASKKH 250
+ +Q V D+ AI + R + FV K++ + A + +D
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246
Query: 251 LSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
+PN T+ID G C G ++ I E ++ +NV I FNSL+N A ++
Sbjct: 247 RVAPNRITYNTLID--GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMME 304
Query: 307 FTLEVYKNMQKLGVMADMASY-----------------------------------NILL 331
V + M+ G + D +Y +ILL
Sbjct: 305 EAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL 364
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C GN A+E+ +K G+ + VF ++TIV + A E M +
Sbjct: 365 NALCKEGNMEKAEEV---LKKFLENGLAPVGVF-FNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ PN +T++SL+ +E+A ++M++ G PN + N L+ +C FDR
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 452 AFRLFRSWT---LSKTQVALG-----EDYDGNTDR----ISNMEHKDKQSITNTPNFVPN 499
F++ L ++ G D N + +M H+ VPN
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR---------GVVPN 531
Query: 500 SH------------------YSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKA--LMN 537
+ + FD+ + + PT TYNIL+ C ++A L +
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
E+ GLS + I++ LI +GNV+ AL++ + M++ G+ P + Y I C + +
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-E 650
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +++EM + P+ V Y L+ +G +VQ+ +++ M G
Sbjct: 651 GLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHG---DVQKACSLHSAMEAQG 701
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 35/422 (8%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y C +++ G+ K+ + + + FN+++N D+ +
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ +G+ + +YN L+K C N A++ +K + KGVL +V TY+T++ +
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC---IKKMVEKGVLP-NVETYNTLIDGYG 473
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
+ + ++ E+M G+ PN I++ LIN C +A ++E A + +M+ G PN+
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILE-AEVILGDMVHRGVVPNA 532
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQS- 489
Q N+L+ A + AFR F + T V +G + ME ++ S
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE 592
Query: 490 ITN--------TPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCTD-Y 529
IT T N + + + S+ + K+ KPT TY+ L+ C +
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL 652
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
V+ + EM + L P+ + + LI G+V+ A + M G+ PD + Y
Sbjct: 653 VLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCL 712
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I + R+ + +L +MK + P TY L+ + L + Y++M++
Sbjct: 713 ILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCK---LKDFDGAYVWYREMFE 769
Query: 650 AG 651
G
Sbjct: 770 NG 771
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 203/501 (40%), Gaps = 78/501 (15%)
Query: 96 SVVVSEGNVSKFASMLSLEMVASGIVKSI-REGRIDCVVGVLKKLNELGVAPLELFDGSG 154
S+ +SE V K +L + S ++ ++ +EG ++ VLKK E G+AP+ +F +
Sbjct: 341 SITLSEEAVRKGVQIL--DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT- 397
Query: 155 FKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYA 214
++ CQ G++ +E +E L + + + C K N+
Sbjct: 398 --IVNGYCQ----VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK---NMEEAEK 448
Query: 215 CI--------VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
CI +P + + + +G+ + + +K PN+ +I+
Sbjct: 449 CIKKMVEKGVLPNVET-YNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL 507
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADM 324
+ +++ I D+ + V N ++N L++ + A LK + M ++ +
Sbjct: 508 CKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YNIL+ C G + A+ + E+ KG L DV TY++++ ++ A Q AL+
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITR---KG-LSFDVITYNSLISGYSSAGNVQKALE 623
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E M +G+ P T+ LI C GLV +++EMLQ P+ N L+ V
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYV 682
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
E +A L S ME + Q
Sbjct: 683 EHGDVQKACSLH-----------------------SAMEAQGIQ---------------- 703
Query: 505 FDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P TYN L+ + ++VK L+N+M+ GL P ++ ILI
Sbjct: 704 --------PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755
Query: 563 NVEGALQILKIMREDGMSPDV 583
+ +GA + M E+G +P V
Sbjct: 756 DFDGAYVWYREMFENGFTPSV 776
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 148/336 (44%), Gaps = 22/336 (6%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M+K GV+ +AS N+ L++ +++ E+ + L+ D F Y
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI----VESGLRPDQFMYGKA 188
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A+++ M GV+P ++ +I ++ A LF+EML
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248
Query: 430 EPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
PN N L+ + Q + AF + + + T + +G R ME
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLC-RAQMMEEAQ 307
Query: 487 K-QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ FVP+ RF++ TT ++ +K C + L E G+
Sbjct: 308 RVLEEMEVYGFVPD--------RFTY---TTLFDGHLK--CGNVDASITLSEEAVRKGVQ 354
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ +IL++A GN+E A ++LK E+G++P V + T + + + +A++
Sbjct: 355 ILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTT 414
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E+M+ ++PN VTY +L++ ++ E ++C+
Sbjct: 415 IEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 40/185 (21%)
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSP 546
+ +P P+ Y+ F S P ++ ++ + C++ V L M+ G+ P
Sbjct: 88 LPKSPFSSPSHLYTLFS--LSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLP 145
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV------------ 594
+ S + +++ + E LQ+ + E G+ PD Y AI+ V
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM 205
Query: 595 -----------------------RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ KR+K A LF+EM ++ PN +TY TL+ +
Sbjct: 206 TCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV 265
Query: 632 GSLHE 636
G L E
Sbjct: 266 GQLEE 270
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 144/321 (44%), Gaps = 20/321 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR---AMGLLP-DVITYNSLLNGYC 356
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ I+ G +E+A L EEM + GC PN
Sbjct: 357 KAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVC 416
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNT 493
IL++ + C A R F LSK L D + NT + + D
Sbjct: 417 TYTILMKGSLNVCSLAMA-REFFDEMLSK---GLQPDCFAYNTRICAELILGDIARALEL 472
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
+ SS T TYNIL+ C + K L +M + GL P+ I++
Sbjct: 473 REVLMLEGISS---------DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 523
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LI A G + A +I M DG+ P V +T I R L A+ F +M
Sbjct: 524 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 583
Query: 612 YQIQPNLVTYITLLRARSRYG 632
++PN +TY L+ A R G
Sbjct: 584 EGVEPNEITYNVLIHALCRMG 604
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 33/380 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G++ D+ +YN LL
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA-----EMRAMGLLPDVITYNSLLNG 354
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AGN A ++G+++ + L V TY+ + + + A +KE+M G
Sbjct: 355 YCKAGNLKEALLLFGDLR----RAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++ L+ N + A F+EML G +P+ N + A + RA
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAL 470
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L +V + E +T + + H + T N +P
Sbjct: 471 EL--------REVLMLEGISSDTVTYNILIH----GLCKTGNLKDAKELQMKMVSNGLQP 518
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N M + GL P+ +++T++I A GN+ A
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E+G+ P+ + Y I R R + A F EM + N TY L+ +
Sbjct: 579 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 638
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G+ + + Y +M + G
Sbjct: 639 GNWEDAMR---FYFEMHQNG 655
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 48/279 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++ DA W V E+ML G+ P+ +T+++L+++ G ++ L
Sbjct: 168 DVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 227
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+EM +GC PN N+++ + A L LSK +
Sbjct: 228 KEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS------------ 275
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
F++ P T +L + C Y ++ EM
Sbjct: 276 -----------------------------FTYNPLIT--GLLARGCVKKVYDLQL---EM 301
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P +++ +I SG VE A MR G+ PDV+ Y + + ++ L
Sbjct: 302 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 361
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
K+A LF +++ + P ++TY + R G L E +
Sbjct: 362 KEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEAR 400
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R ++++ S+ + + + +N+ + + D+ LE+ + + G+ +D +YNIL+
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A+E+ ++ L+ D TY+ ++ + + A K+ +M+S
Sbjct: 494 GLCKTGNLKDAKELQMKM----VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
G+ P+ +T++ +I+A G + A F +ML+ G EPN N+L+ A
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 599
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E + S VT NI + N D K E+ M G+ D +Y L+ A C G
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAK---ELQMKMVSNGLQPDCITYTCLIHAHCERGL 535
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++I+ ++ + G+L V T++ I+ + A ML GV PN I
Sbjct: 536 LREARKIF---NNMISDGLLPSAV-TFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 591
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T++ LI+A G + A H F EML+ G N +L+ + ++ A R +
Sbjct: 592 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFY 648
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL 318
I + G+C G+ ++ + + S + + + L++ + L+ +++ NM
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G++ ++ +++ A C GN A YG + + +GV + + TY+ ++
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSA---YGWFRKMLEEGV-EPNEITYNVLIHALCRMGR 605
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
Q+A +ML G+ N T++ LI+ G E AM + EM Q G P+
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 659
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 152/355 (42%), Gaps = 34/355 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++ M + G+ D +Y IL+ C A T LA ++ H + KG K DVFTY
Sbjct: 97 VQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL-----HEKMKGNCKGDVFTYGM 151
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ AL + +M+ AG+ P+ + +SSL++ G +++A+ F+EM G
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211
Query: 429 CEPNSQCCNILLQACVEACQF-----------DRAFRLFRSWTLSKTQVAL-GEDYDGNT 476
+ N L+ A + DR F ++T + L E G
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP-DAFTFTILIDGLCKEGKVGEA 270
Query: 477 DRISN-MEHKDKQSITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMK 523
+I M HK K+ T N + N + S R K +YNIL+
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILIN 329
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D +A L EMR GL P+ +++ LI A SG V A ++ M+ G
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ Y + ++ L++A LF+ +K + +PN+ + LL R G L E
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 178/408 (43%), Gaps = 48/408 (11%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLE 310
P++ + +++D G+C G ++ ++++ + ++ ++Y +NSL++ ++ L +
Sbjct: 179 PDVVVYSSLMD--GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT 236
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ N M G D ++ IL+ C G AQ+I E+ H + K + D+ TY+T+
Sbjct: 237 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL-ELMHHKGK---EPDILTYNTL 292
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A K+ E + G+ N +++ LIN +++A LFEEM G
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK-- 487
+P++ N L+ A ++ + A +LF + L Y D + H ++
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL-STYCVLLDGLCKNGHLEEAI 411
Query: 488 ---QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
QSI K+ KP ++IL+ C +A +E+
Sbjct: 412 DLFQSI----------------KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++ ILI+ G + A+++L M E G PD + + I+ ++ + +A
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
L EEM++ P+ LL CLA + W A
Sbjct: 516 IQLLEEMRNRNFSPDEAVTSMLL--------------CLASFDPQWHA 549
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 61/350 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + +ID G+C G +++ I E + + +I +N+LMN L+
Sbjct: 248 SPDAFTFTILID--GLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++++++ G+ ++ SYNIL+ C A ++ E++ KG LK TY+T
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR---PKG-LKPSTVTYNT 361
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A K+ +M + G T+ L++ G +E+A+ LF+ + +
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN + +ILL A + + A++ F D IS
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQF--------------------DEIS-------- 453
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+ +P T YNIL+ C +A L+ +M G P
Sbjct: 454 -------------------KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ I++ ++I + A+Q+L+ MR SPD T++ +C+ S
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD--EAVTSMLLCLAS 542
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 50/256 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G P+ +T ++L+ + A+ LF+EM + G +++ IL+ +A +
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L E GN
Sbjct: 129 GLAIKLH-------------EKMKGNC--------------------------------- 142
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
K TY +++ + C D +AL +EM G+ P+ + ++ L+D G ++ A
Sbjct: 143 --KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 200
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L+ K M G+S DV Y + I R+ K+ M P+ T+ L+
Sbjct: 201 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260
Query: 628 RSRYGSLHEVQQCLAV 643
+ G + E QQ L +
Sbjct: 261 LCKEGKVGEAQQILEL 276
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 517 TYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
TY IL+ C A+ ++E + ++ ++ID+ G AL + M
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI 173
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PDVV Y++ + R RLK+A F+EM+ I ++ TY +L+ SR G
Sbjct: 174 GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWK 233
Query: 636 EVQQCLAVYQD 646
EV L + D
Sbjct: 234 EVTWFLNLMVD 244
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 163/378 (43%), Gaps = 58/378 (15%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
+SP Y ++D+ G + + + + ++S+ V + ++ F++L+ V A +
Sbjct: 176 ASPEPY--NEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAV 233
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ G DM +++I++ + C AQ + +KH + DV Y+++
Sbjct: 234 HAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-----FEPDVVVYTSL 288
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + A A +V DM AG+ PN T+S +I++ G + +A +F EM+ AGC
Sbjct: 289 VHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 348
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L++ V+A + ++ +++
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQM------------------------------ 378
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
KR T +YN ++++ C D +A ++N M G++PN
Sbjct: 379 -----------------KRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPN 421
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + +V GA ++ M+E P+ + Y +++ S+ + +
Sbjct: 422 ASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKK 481
Query: 608 EMKHYQIQPNLVTYITLL 625
EM Q++PN+ TY L+
Sbjct: 482 EMDESQVEPNVNTYRILI 499
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 34/264 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + V + + D+ A + K PN+Y +ID CG ++ ++ +
Sbjct: 283 VVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSE 342
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ N FNSLM +V A + L+VY M++LG AD SYN ++++ C
Sbjct: 343 MIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDEN 402
Query: 336 ---------------LAGNTVLAQEIYGEVKHL-EAKGVLKL-----------DVFTYST 368
+A N I+G + L + G ++ + TY+
Sbjct: 403 LEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNI 462
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++++FA+++ M LK+K++M + V PN T+ LI+ + A L EM++
Sbjct: 463 LMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEK 522
Query: 429 C-EPNSQCCNILLQACVEACQFDR 451
C PN +L+ +A Q +
Sbjct: 523 CLRPNLSVYETVLELLRKAGQLKK 546
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 52/279 (18%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ + + + +A V + M S GV T+S+L+ AGL +A+H F M
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
GC P+ +I++ + C+ RA
Sbjct: 241 DYGCTPDMVAFSIVISSL---CKKRRA--------------------------------- 264
Query: 486 DKQSITNTPNFVPNSHYSSFDK-RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
N S FD + F+P Y L+ C D + + + ++M+
Sbjct: 265 -------------NEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMA 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN +++I+ID+ G + A + M + G P+ V + + ++V V++ R ++
Sbjct: 312 GIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKV 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ +MK + ++Y ++ + R +L E + L
Sbjct: 372 LKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKIL 410
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 19/242 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + KKR A +D S KH P++ + +++ GD K+ ++ D
Sbjct: 249 VAFSIVISSLCKKRRANEAQSFFD-SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSD 307
Query: 282 LRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ + N+Y ++ +++ AHD V+ M G + ++N L++
Sbjct: 308 MKMAGIKPNVYTYSIVIDSLCRCGQITRAHD------VFSEMIDAGCDPNAVTFNSLMRV 361
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG T ++Y ++K L D +Y+ I++ + + A K+ M+ G
Sbjct: 362 HVKAGRTEKVLKVYNQMKRLGCPA----DTISYNFIIESHCRDENLEEAAKILNLMVKKG 417
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN T++ + A V A ++ M + C+PN+ NIL++ E+ D
Sbjct: 418 VAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVL 477
Query: 454 RL 455
++
Sbjct: 478 KM 479
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 59/349 (16%)
Query: 345 EIYGEV----KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ YG V K +E G L D++T S ++ F+ + +A V M+ G+ P+ +T
Sbjct: 109 QYYGAVISLSKQMELAG-LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVT 167
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++LIN G QA+ F++ +GC+P ++ + + A LF+
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKME 227
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ Q + Y+ D + KDK F S+ K P TYN
Sbjct: 228 EAGCQPNV-VTYNILIDSLC----KDKLVNEALDIF-------SYMKAKRISPDIFTYNS 275
Query: 521 LMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L++ C ++ R K AL+NEM ++ + PN ++ +L+DA G V A + K M E
Sbjct: 276 LIQGLC-NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334
Query: 578 GMSPDVVAYTT-----------------------------------AIKVCVRSKRLKQA 602
G+ PDVV Y++ IK ++KR+ +A
Sbjct: 335 GVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF EM H + P+ V Y TL+ + G L E Q ++++M G
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD---LFKNMHSNG 440
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 162/385 (42%), Gaps = 41/385 (10%)
Query: 290 NIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+IY + L++ +H DL F+ V+ M KLG+ D ++N L+ C G A E
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFS--VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + EA G + V+TY+TI+ A + + M AG PN +T++ LI
Sbjct: 187 FFDD---FEASGC-QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
++ LV +A+ +F M P+ N L+Q ++ A L T
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302
Query: 466 VALGE-----DYDGNTDRISNME--HKDKQSITNTPNFVPNSHYSSFDKRFSF------- 511
+ D ++S + K + P+ V YSS +S
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT---YSSLMYGYSLRMEIVEA 359
Query: 512 ------------KPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDA 557
KP +YNIL+K C K L NEM GL+P+++++ LI
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + A + K M +G PD+ Y+ + + L +AF LF M+ ++P+
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
+ Y L+ A ++G+L + ++ +
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFS 504
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 179/434 (41%), Gaps = 59/434 (13%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I+ G+C G + ++ ++D + +Y + +++N +
Sbjct: 163 PDAVTFNTLIN--GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAA 220
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M++ G ++ +YNIL+ + C L E +++AK + D+FTY+++
Sbjct: 221 GLFKKMEEAGCQPNVVTYNILIDSLC---KDKLVNEALDIFSYMKAKRI-SPDIFTYNSL 276
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM----------- 418
++ + + W+ A + +M S + PN T++ L++A G V +A
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 419 ------------------------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
LF+ M+ GC+P++ NIL++ +A + D A +
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF L D I + + + + N H + P
Sbjct: 397 LFNEMI----HQGLTPDNVNYNTLIHGLCQLGR--LREAQDLFKNMHSNGN------LPD 444
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY++L+ C + Y KA L M++ L P+ + ILIDA GN++ A ++
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ G+ P+V YTT I + L +A F M+ P+ +Y ++R +Y
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYK 564
Query: 633 SLHEVQQCLAVYQD 646
Q + +D
Sbjct: 565 DESRAAQLIGEMRD 578
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 55/287 (19%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S IVK+ +++ + + + M AG++P+ T S LI+ ++ V+ A +F +M++
Sbjct: 102 SAIVKM---GQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIK 158
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G +P++ N L+ + +F +A F + S Q
Sbjct: 159 LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ--------------------- 197
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
PT TY ++ C + L +M G
Sbjct: 198 --------------------------PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGC 231
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN +++ ILID+ V AL I M+ +SPD+ Y + I+ +R K+A +
Sbjct: 232 QPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASA 291
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L EM I PN+ T+ L+ A + G + E Q V++ M + G
Sbjct: 292 LLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ---GVFKTMTEMG 335
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 105/226 (46%), Gaps = 10/226 (4%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNI 291
+ ++V A + +DA P+ + +I G C +++ ++ ++ Q +T +
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIK--GYCKAKRIDEAKQLFNEMIHQGLTPDN 410
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L++ L+ +++KNM G + D+ +Y++LL C G A ++
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF-- 468
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ LK D+ Y+ ++ + A K+ ++ G+ PN ++++IN
Sbjct: 469 --RVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLC 526
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
GL+++A+ F M GC P+ N++++ ++ RA +L
Sbjct: 527 KEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQL 572
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 49/293 (16%)
Query: 106 KFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAP-----LEL 149
K AS L EM + I+ +I +EG++ GV K + E+GV P L
Sbjct: 287 KEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL 346
Query: 150 FDGSGFKLLKNECQRLLDSG-----EVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNK 204
G ++ E ++L D+ + + F +L + K +DE ++ +++
Sbjct: 347 MYGYSLRMEIVEARKLFDAMITKGCKPDAFS--YNILIKGYCKAKRIDEAKQLFNEMIHQ 404
Query: 205 ---PD---VNLAIRYACIVPR---ADILFCN---------------FVREFGKKRDLVSA 240
PD N I C + R A LF N + F K+ L A
Sbjct: 405 GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKA 464
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
R + + P++ + +ID G+ +R ++ +L Q + N+ ++ +++N
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L LE ++NM+ G D SYN++++ + A ++ GE++
Sbjct: 525 LCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 60/330 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVK---HLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
Y +LL CC A ++I G ++ LE++G LK D Y++++ A A +
Sbjct: 298 YTMLLSVCCHA------KDIDGALRVLALLESRG-LKADCMFYTSLISACAKAGKVDLLF 350
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ +M AG+ N T+ ++I+ CA AG + +A + M+ +P+ N L+ AC
Sbjct: 351 QIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVKPDRVIFNTLINAC 410
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A RAF D +++M+ + TP
Sbjct: 411 TRAGAVQRAF-----------------------DVLTDMKAE------ATP--------- 432
Query: 504 SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
KP TY L+ AC + R + MR + + +T ++ AC
Sbjct: 433 -------IKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQK 485
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GNV+ AL + +++DG+ PD V ++ + ++ +++AFS+ MK ++P V Y
Sbjct: 486 GNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVY 545
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ S G+ ++ L VYQD+ +G
Sbjct: 546 SSLMGVCSNLGNW---EKALEVYQDIRSSG 572
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 64/388 (16%)
Query: 274 KSRAIYED------LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
K+R ED L + TL Y + +A D+ L V ++ G+ AD Y
Sbjct: 274 KARGSVEDAFAFAKLMREFSTLQHYTMLLSVCCHAKDIDGALRVLALLESRGLKADCMFY 333
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ AC AG L +I+ E +E G+ + +V T+ ++ A A A
Sbjct: 334 TSLISACAKAGKVDLLFQIFHE---MEVAGI-EANVHTFGAMIDGCARAGQLPKAFGAYG 389
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC--EPNSQCCNILLQACVE 445
M+S V P+ + +++LINAC AG V++A + +M +P+ L+ AC
Sbjct: 390 IMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACAR 449
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + DRA ++++ R SN+
Sbjct: 450 AGEVDRALEVYQNM------------------RESNV----------------------- 468
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K + Y ++ AC AL+ ++++ G+ P+ + ++ L+DA G + +
Sbjct: 469 ------KGSPACYTAVVHACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQD 522
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E A I+ M+++G+ P V Y++ + VC ++A ++++++ +QP + T+
Sbjct: 523 IEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNA 582
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A ++ + L++ QD+ +G
Sbjct: 583 LMTALCEA---NQFTRALSILQDVKNSG 607
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMNV--NAHDLKFTL 309
P+ I T+I+ C G ++ + D++++ + + + +L++ A ++ L
Sbjct: 398 PDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACARAGEVDRAL 457
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EVY+NM++ V A Y ++ AC GN A +Y ++K K +K D +S +
Sbjct: 458 EVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDDLK----KDGVKPDEVFFSAL 513
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A + +M G+ P + +SSL+ C+N G E+A+ +++++ +G
Sbjct: 514 VDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGL 573
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFR 457
+P N L+ A EA QF RA + +
Sbjct: 574 QPTVSTFNALMTALCEANQFTRALSILQ 601
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 53/388 (13%)
Query: 65 RDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVS--EGNVSKFASMLSLEMVASGIVK 122
R L + +Y + S AK G+++ I + V+ E NV F +M I
Sbjct: 324 RGLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAM---------IDG 374
Query: 123 SIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLE 182
R G++ G + V P + F L N C R +G V+ ++ ++
Sbjct: 375 CARAGQLPKAFGAYGIMISKNVKPDRVI----FNTLINACTR---AGAVQRAFDVLTDMK 427
Query: 183 EFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR 242
P+K PD + Y + I C E + ++ +R
Sbjct: 428 AEATPIK---------------PD---HVTYGAL-----ISACARAGEVDRALEVYQNMR 464
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+ SP Y ++ C G+ + +Y+DL+ V + F++L++
Sbjct: 465 ESNVK----GSPACYTA--VVHACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAG 518
Query: 303 H--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
H D++ + NM+K G+ Y+ L+ C GN A E+Y +++ L+
Sbjct: 519 HAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIR----SSGLQ 574
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V T++ ++ +A + AL + +D+ ++G+ PN I++S L+ AC + + A+ L
Sbjct: 575 PTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILLRACEKEKMADMALDL 634
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQ 448
+ L G +PN C+ + C++ Q
Sbjct: 635 YMTALSEGIKPNVGICDSITGLCLQQIQ 662
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEV 311
P+ +I C G+ ++ +Y+++R NV + + ++++ + ++ + L V
Sbjct: 435 PDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLV 494
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +++K GV D ++ L+ A AG+ ++ + + +++ +G LK YS+++
Sbjct: 495 YDDLKKDGVKPDEVFFSALVDA---AGHAQDIEKAFSIIANMKKEG-LKPGAVVYSSLMG 550
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
V ++ W+ AL+V +D+ S+G+ P T+++L+ A A +A+ + +++ +G P
Sbjct: 551 VCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMP 610
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N +ILL+AC + D A L+
Sbjct: 611 NQISYSILLRACEKEKMADMALDLY 635
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 178 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 237
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 293
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 386
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 387 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 487 EMVENGITPDDSTYISLIEG 506
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 173/403 (42%), Gaps = 44/403 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+Y ++S ++ ++ + L++ F L + +M +L + ++NI+L+ C A
Sbjct: 70 LYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIMLRHLCSA 127
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTP 396
G A E+ ++ A TY+T++ F Q AL + +M G+ P
Sbjct: 128 GKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRL 455
N T+ ++I+ G V++A+ +F+EML G +P + N L+ + + D A L
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-L 238
Query: 456 FRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNFVPNSH- 501
+R + + Y DG + + M K T N + N H
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298
Query: 502 -----------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
+ + +R + T TY L+ A L +E G+ P+
Sbjct: 299 KEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A L +E
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M IQP+LVTY TL+ S G +V+ L + +M G
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKG 457
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 22/329 (6%)
Query: 309 LEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
L++ + M ++ G+ + +Y ++ C G A +++ E + KG +K + Y+
Sbjct: 165 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE---MLTKGEVKPEAVMYN 221
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + D AL ++ M+ GV T++ L++A G +A L EEM
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P+ NIL+ + +A +F + + + + T I + K +
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT----YTALIYALSKKGQ 337
Query: 488 QSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
T+ FD+ R +P YN L+ + T + R +M EM
Sbjct: 338 VQETD----------KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++P+ +++ L+ G V+ A +++ M E G+ PD+V Y T I +K A
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ EM + P L+TY L++ + G
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLCKNG 476
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 175/413 (42%), Gaps = 42/413 (10%)
Query: 270 GDYMKSRAIYEDL-----RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
GDY +++D+ R N+T N + H + + M K D+
Sbjct: 226 GDYGSVWKLFKDMIFKGPRPSNLTFNAMICGF---CRQHRVVVGESLLHLMPKFMCSPDV 282
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
++NIL+ ACC+ G T +A + HL + ++ V T++TI+ A K
Sbjct: 283 VTFNILINACCIGGRTWVAIDWL----HLMVRSGVEPSVATFTTILHALCREGNVVEARK 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + + G+ PN +++L++ A V QA L+EEM G P+ NIL+
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYD---------GNTDRISNMEHKDKQSITNTPN 495
+ + + + RL + +S + YD G D + + +
Sbjct: 399 KYGRIEDSDRLLKDLIVSGLFLD-SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSV 457
Query: 496 FVPNSHYSSF------DKRF---------SFKPTTTTYNILMKACCTDYY--RVKALMNE 538
NS ++ DK F F P+++T N L+ C + + L+
Sbjct: 458 VAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G N +++T+L+D N+EGA + K M+E G+ PD VA+T I ++
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A+ +F EM PN Y +L+R G V + L + ++M + G
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG---RVTEALKLEKEMRQKG 627
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 194/433 (44%), Gaps = 39/433 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + ++ ++V A + +D + +PN I T++D + ++ +YE++R
Sbjct: 320 FTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMR 379
Query: 284 SQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V+ + FN L+ + ++ + + K++ G+ D + Y++++ + C AG
Sbjct: 380 TTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLD 439
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A ++ ++ L KG L L V +++++ ++ A A + M+ G TP++ T
Sbjct: 440 EAMKL---LQELLEKG-LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTC 495
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-----VEACQFDRAFRLF 456
+SL+ G +++A L ML+ G N +LL +E QF ++
Sbjct: 496 NSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQF--LWKEM 553
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP-NFVPNSH-YSSFDKRF----- 509
+ + VA DG + N+E + + + FVPN+ Y+S +
Sbjct: 554 KERGIYPDAVAFTALIDG-LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612
Query: 510 --------------SFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWT 552
T T+NI++ C + ++ + +M+ +GL P+ ++
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFL-DMQRIGLLPDIFTFN 671
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
ILI + ++ GA +I+ M G+ PD+ Y T + R +++ QA + +++
Sbjct: 672 ILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISA 731
Query: 613 QIQPNLVTYITLL 625
I P+ VTY T+L
Sbjct: 732 GIVPDTVTYNTML 744
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 173/406 (42%), Gaps = 66/406 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ TI+ G+ +++R +++ ++ + N ++N+LM+ A ++ +
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLL 374
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M+ GV D ++NIL+ G + + +K L G+ LD Y +V
Sbjct: 375 YEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRL---LKDLIVSGLF-LDSSLYDVMVS 430
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
A A+K+ +++L G+T + + ++SLI A + AGL ++A + M++ G P
Sbjct: 431 SLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTP 490
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S CN LL L R L + ++ L
Sbjct: 491 SSSTCNSLLMG------------LCRKGWLQEARILL----------------------- 515
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV------KALMNEMRTVGLS 545
Y +K F Y +L+ Y+++ + L EM+ G+
Sbjct: 516 ----------YRMLEK--GFPINKVAYTVLLDG----YFKMNNLEGAQFLWKEMKERGIY 559
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++T LID +GNVE A ++ M G P+ AY + I+ R+ +A L
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+EM+ + + T+ ++ R G +++ + + DM + G
Sbjct: 620 EKEMRQKGLLSDTFTFNIIIDGFCRRG---QMKFAIETFLDMQRIG 662
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 162/374 (43%), Gaps = 33/374 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A AY + +P+ C +++ G+C G ++R + + + +N + L
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLL--MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ ++L+ ++K M++ G+ D ++ L+ AGN A E++ E + A
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE---MSA 590
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G + + F Y+++++ D ALK++++M G+ +T T++ +I+ G ++
Sbjct: 591 IGFVP-NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMK 649
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A+ F +M + G P+ NIL+ + +AF + + + + G D D
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGG------YCKAFDMVGAGEIVNKMYSCGLDPDIT 703
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKA 534
T + M + N + + S+ P T TYN ++ C+D R
Sbjct: 704 TYN-TYMHGYCRMRKMNQAVIILDQLISA-----GIVPDTVTYNTMLSGICSDILDRAMI 757
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++ +G PN I+ +L+ G E AL + +RE D ++Y
Sbjct: 758 LTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISY-------- 809
Query: 595 RSKRLKQAFSLFEE 608
+ L QA+ L ++
Sbjct: 810 --RILDQAYCLMQD 821
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +T+++ F + AL+V M GV P + + L+ G LF
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M+ G P++ N ++ C F R R V +GE
Sbjct: 236 KDMIFKGPRPSNLTFNAMI------CGFCRQHR-----------VVVGE----------- 267
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ + +P +F P T+NIL+ ACC A+ ++ M
Sbjct: 268 ----------SLLHLMP---------KFMCSPDVVTFNILINACCIGGRTWVAIDWLHLM 308
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ ++T ++ A GNV A ++ +++ G++P+ Y T + +++ +
Sbjct: 309 VRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREV 368
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QA L+EEM+ + P+ VT+ L+ +YG + + + L
Sbjct: 369 AQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLL 410
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 182/415 (43%), Gaps = 58/415 (13%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYK 313
Y C +I+ G Y + ++ ++ + +N ++NV + +
Sbjct: 196 YTC--LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVE 253
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT-----YST 368
M+ GV D+ +YN L+ +CC G+ +Y E HL + +KL+ FT Y+
Sbjct: 254 AMRSRGVAPDLYTYNTLI-SCCRRGS------LYEEAVHLFQQ--MKLEGFTPDKVTYNA 304
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF ++ Q A+KV ++M + G +P ++T++SLI+A A GL+E+A+ L +M+ G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---------YDGNTDRI 479
+P+ LL +A + D A ++F L V + GN +
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVF----LEMRAVGCKPNICTFNALIKMHGNRGKF 420
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY--RVKAL 535
+ M FD K + P T+N L+ + +V +
Sbjct: 421 AEM-------------------MKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGI 461
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM+ G ++ LI A G+ + A+ + K M E G+ PD+ Y + R
Sbjct: 462 FKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALAR 521
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+Q+ + EM+ + +PN ++Y +LL A Y + E+++ A ++++
Sbjct: 522 GGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA---YANGKEIERMNAFAEEIYSG 573
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 187/442 (42%), Gaps = 64/442 (14%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY---ICRTIIDVCGICGDYMK 274
P +DIL F K DL AL + + + S+ N++ II + G G
Sbjct: 119 PASDILGIIKALGFSNKCDL--ALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSS 176
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLK 332
+ ++ L++ V +++Y + L+N + ++ + ++ MQ+ G + +YN++L
Sbjct: 177 AASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLN 236
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G + + V+ + ++GV D++TY+T++ ++ A+ + + M
Sbjct: 237 VYGKMG--MPWSNVTALVEAMRSRGVAP-DLYTYNTLISCCRRGSLYEEAVHLFQQMKLE 293
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TP+ +T+++L++ + ++AM + +EM G P S N L+ A + + A
Sbjct: 294 GFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEA 353
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
L KTQ M HK K
Sbjct: 354 LDL-------KTQ----------------MVHK------------------------GIK 366
Query: 513 PTTTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY L+ D + ++ + EMR VG PN ++ LI G G ++
Sbjct: 367 PDVFTYTTLLSGFEKAGKDDFAIQVFL-EMRAVGCKPNICTFNALIKMHGNRGKFAEMMK 425
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ ++ SPD+V + T + V ++ Q +F+EMK T+ TL+ A S
Sbjct: 426 VFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYS 485
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
R GS Q +AVY+ M +AG
Sbjct: 486 RCGSF---DQAMAVYKSMLEAG 504
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 176/392 (44%), Gaps = 30/392 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLE 310
PN+ +I + G G + + +++D++ N + +I +N+L+ V N D + +
Sbjct: 402 PNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS-G 460
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K M++ G +A+ ++N L+ A G+ A +Y + LEA GV+ D+ TY+ ++
Sbjct: 461 IFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM--LEA-GVVP-DLSTYNAVL 516
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A W+ + KV +M PN +++SSL++A AN +E+ EE+ E
Sbjct: 517 AALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVE 576
Query: 431 PNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
++ L+ ++ + +RAF R +S L
Sbjct: 577 THAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA----------------M 620
Query: 488 QSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGL 544
SI V +H +F F P+ TTYN LM + ++ + + ++ E+ G+
Sbjct: 621 LSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM 680
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ IS+ +I A +G ++ A +I M++ + PDVV Y T I +A
Sbjct: 681 KPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAID 740
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ M +P+ TY +++ + HE
Sbjct: 741 VVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHE 772
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 194/474 (40%), Gaps = 76/474 (16%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
LV A+R+ + P++Y T+I C Y ++ +++ ++ + T + +N+
Sbjct: 251 LVEAMRSRGVA------PDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNA 304
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++V + + ++V + M+ G +YN L+ A G A ++ ++ H
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVH-- 362
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT---------------- 398
KG+ K DVFTY+T++ F A A++V +M + G PN
Sbjct: 363 -KGI-KPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKF 420
Query: 399 -------------------ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+TW++L+ G+ Q +F+EM +AG N L
Sbjct: 421 AEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTL 480
Query: 440 LQACVEACQFDRAFRLFRS------------WTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ A FD+A +++S + +A G ++ + ++ ME D
Sbjct: 481 ISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME--DG 538
Query: 488 QSITNTPNFVPNSHYSSFDKRFS---------FKPTTTTYNILMKACCTDYYRVKALMN- 537
+ N ++ H + K + + T+ +L+K + L+
Sbjct: 539 RCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIET 598
Query: 538 -----EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
E+R G+SP+ + ++ G V A +IL M E +P + Y + + +
Sbjct: 599 ERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYM 658
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
RS+ +++ + E+ ++P+ ++Y T++ A R G + E + + +D
Sbjct: 659 YSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKD 712
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y+ V +L V K L+ RA+ ++ SP++ ++ + G
Sbjct: 571 YSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMV 630
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNIL 330
K+ I + T ++ +NSLM + + F + E+ + + + G+ D SYN +
Sbjct: 631 AKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTV 690
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A I+ E+K L DV TY+T + +A + A+ V M+
Sbjct: 691 IYAYCRNGRMKEASRIFSEMK----DSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMI 746
Query: 391 SAGVTPNTITWSSLIN 406
G P+ T++S+++
Sbjct: 747 KQGCKPDQNTYNSIVD 762
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 185/430 (43%), Gaps = 20/430 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C + F K+ + A +D K P++ +I V G+ +S ++ +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V N++ FN + + + +++ G+ D+ SYN L+ C V
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E Y H ++ + FTY+TI+ F A Q A K+ D + G P+ T+
Sbjct: 304 EA-ECY---LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SSLIN N G + +AM +F E ++ G + + N L++ + + ++ L
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG------LSKQGLVLQALQL 413
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + G D T + + K + N + N + P T+N L
Sbjct: 414 MKDMMEHGCSPDIWTYNLV-VNGLCKMGCLSDANGILNDAIAK-----GCIPDIFTFNTL 467
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C KA +++ M + G++P+ I++ L++ + ++ + K M E G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P+++ Y I+ + +++ +A LF+EMK + P++VT TL+ G L + +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 640 CLAVYQDMWK 649
+ +K
Sbjct: 588 LFVTIEKEYK 597
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 47/387 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHDLKF-TL 309
P+ + ++I+ G+C GD ++ A++ + + +I ++N+L+ ++ L L
Sbjct: 354 PDEFTYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ K+M + G D+ +YN+++ C G A I + AKG + D+FT++T+
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI---AKGCIP-DIFTFNTL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+++ + MLS G+TP+ IT+++L+N A ++ + F+ ML+ GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL-----GEDYDGNTDRISN 481
PN NIL+++ + + A LF+ L+ V L G +G D+
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + +K + F +T +NI++ A C + + L ++M
Sbjct: 588 L-------------------FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV----CVR 595
+P++ ++ ++ID+ +GN++ A L G+ P ++TT KV CV
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP---SFTTCGKVLNCLCV- 684
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ RL +A + M I P V I
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEEVNSI 711
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 162/386 (41%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASY 327
G ++ ++E + + ++ +N++MN+ F+ +VY M+ +G+ D+ ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C+ G A + + ++ +G + + +Y ++ F A + +
Sbjct: 150 TIRMKSFCITGRPTAALRL---LNNMPGQGC-EFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G+ P+ +T++ LI+ G V+++ LF ++++ G PN NI +Q
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D A RL S + +T
Sbjct: 266 AIDEAARLLESIV--------------------------SEGLT---------------- 283
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YN L+ C V+A +++M G+ PN ++ +I+ +G ++
Sbjct: 284 -----PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +IL+ G PD Y++ I + +A ++F E + +++ Y TL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ S+ G V Q L + +DM + G
Sbjct: 399 KGLSKQGL---VLQALQLMKDMMEHG 421
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 175/385 (45%), Gaps = 20/385 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+++ +I+ GD K+ +Y ++ N+ N ++ L++ + L +
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G+ + +YN L+ C G+ A+ ++ E+ + KGV + T+++++
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN---KGV-EPTATTFTSLIS 478
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ Q A K+ M+ G+TPN T+++LI+ + + +A LF+E+++ +P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+L++ + D+AF L Q L D IS + + ++
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDM----HQKGLVPDTYTYRPLISGLCSTGR--VS 592
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPNHI 549
+F+ + H + + K Y+ L+ C + ++AL EM G++ + +
Sbjct: 593 KAKDFIDDLH------KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLV 646
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+LID + + +LK M + G+ PD V YT+ I + K+AF ++ M
Sbjct: 647 CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLM 706
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL 634
+ PN+VTY L+ + G +
Sbjct: 707 VTEECFPNVVTYTALMNGLCKAGEM 731
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 159/370 (42%), Gaps = 60/370 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+ Y R +I G+C G K++ +DL QNV LN +++L++ + + L
Sbjct: 573 PDTYTYRPLIS--GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M + G+ D+ + +L+ + + + +K + +G L+ D Y+++
Sbjct: 631 SASCEMIQRGINMDLVCHAVLIDGALKQPDR---KTFFDLLKDMHDQG-LRPDNVIYTSM 686
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A + + M++ PN +T+++L+N AG +++A LF+ M A
Sbjct: 687 IDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANV 746
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PNS C D L+K +GN + H +
Sbjct: 747 PPNS---------ITYGCFLD---------NLTK---------EGNMKEAIGLHHAMLKG 779
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+ T T+NI+++ C ++ +++EM G+ P+
Sbjct: 780 LL---------------------ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPD 818
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LI SGNV ++++ M G+ PD+VAY I C + L +AF L +
Sbjct: 819 CVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRD 878
Query: 608 EMKHYQIQPN 617
+M I P+
Sbjct: 879 DMLRRGIIPD 888
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 194/500 (38%), Gaps = 86/500 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F + L A+ +D + +Y ++I+ G C GD + +++
Sbjct: 401 ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN--GQCKFGDLSAAESLF 458
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ ++ V F SL++ DL+ ++Y M G+ ++ ++ L+ C
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A E++ E+ +E K +K TY+ +++ + A ++ EDM G+ P+
Sbjct: 519 NKMAEASELFDEL--VERK--IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLF 456
T T+ LI+ + G V +A +++ + + N C + LL C E RL
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEG-------RLM 627
Query: 457 RSWTLSKTQVALGEDYD------------GNTDRISNMEH-KDKQSITNTP-NFVPNSHY 502
+ + S + G + D DR + + KD P N + S
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687
Query: 503 SSFDKRFSFK---------------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
++ K SFK P TY LM C + R L M+ +
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747
Query: 546 PNHISWTILIDACGGSGNVEGAL----------------------------------QIL 571
PN I++ +D GN++ A+ ++L
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVL 807
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E+G+ PD V Y+T I RS + + L++ M + ++P+LV Y L+
Sbjct: 808 SEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVN 867
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G E+ + + DM + G
Sbjct: 868 G---ELDKAFELRDDMLRRG 884
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 56/344 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E++ GV D + + ++++ C + + A+E +++ +EA G L + TY+ +
Sbjct: 211 ELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE---KIRWMEANG-FDLSIVTYNVL 266
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A++VK + G+ + +T+ +L+ E + L +EM++ G
Sbjct: 267 IHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGF 326
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P + L+ + + D A+ L V +G
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELV---------VKVG-------------------- 357
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
RF F P YN L+ + C D + + L + M + L PN
Sbjct: 358 ------------------RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPN 399
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++ILID+ SG ++ A+ M +DG+ V AY + I + L A SLF
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + ++P T+ +L+ S Y +VQ+ +Y M G
Sbjct: 460 EMTNKGVEPTATTFTSLI---SGYCKDLQVQKAFKLYNKMIDNG 500
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 127/329 (38%), Gaps = 53/329 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ + + G + ++ YN L+ + C G+ A+ +Y + + L+ + TYS +
Sbjct: 351 ELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN----LRPNGITYSIL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +A+ + M+ G+ ++SLIN G + A LF EM G
Sbjct: 407 IDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGV 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
EP + L+ + Q +AF+L+ +
Sbjct: 467 EPTATTFTSLISGYCKDLQVQKAFKLY------------------------------NKM 496
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
I N P T+ L+ C+ +A L +E+ + P
Sbjct: 497 IDN-----------------GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +LI+ G ++ A ++L+ M + G+ PD Y I + R+ +A +
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFID 599
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ ++ N + Y LL + G L E
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEGRLME 628
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++++ + + + K+ A +D PN+ +++ G+C G+ ++ +
Sbjct: 680 NVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMN--GLCKAGEMDRAGLL 737
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++ +++ NV N + ++ ++K + ++ M K G++A+ ++NI+++ C
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCK 796
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E + G+ D TYST++ + + ++K+ + ML+ G+ P
Sbjct: 797 LGRFHEATKVLSE---MTENGIFP-DCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + ++ LI C G +++A L ++ML+ G P+++
Sbjct: 853 DLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 58/377 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP Y +ID+ G + + + + ++++NV + + F+ L+ V A +
Sbjct: 147 SPQPY--NEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVH 204
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G AD+ +++ ++ C V AQ + +KH + DV Y+++V
Sbjct: 205 AFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH-----KFEPDVIVYTSLV 259
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A V +M AG++PN T+S +I+A +G + +A +F EML AGC
Sbjct: 260 HGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCN 319
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PNS N L++ + A + ++ +++
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQM------------------------------- 348
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
KR TYN L++ C D +A+ +N M +PN
Sbjct: 349 ----------------KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNA 392
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ + S +V GA ++ M+E G P+ V Y +++ K F L +E
Sbjct: 393 SSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKE 452
Query: 609 MKHYQIQPNLVTYITLL 625
M +++PN TY L+
Sbjct: 453 MDEEEVEPNFNTYRELI 469
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 213 YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
Y C ADI+ F N + KKR V A +D + KH P++ + +++ GD
Sbjct: 212 YGC---NADIIAFSNVISILCKKRRAVEAQSFFD-NLKHKFEPDVIVYTSLVHGWCRAGD 267
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNI 329
++ +++ +++ ++ N+Y ++ +++ + T +V+ M G + ++N
Sbjct: 268 ISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNN 327
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L++ AG T ++Y ++K L D+ TY+ +++ A+KV M
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAA----DLITYNFLIETHCKDDNLGEAIKVLNSM 383
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
TPN +++ + A + V A +F M + GC+PN+ NIL++
Sbjct: 384 AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSA 443
Query: 450 DRAFRL 455
D F+L
Sbjct: 444 DMIFKL 449
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ + K + +A + + M + V +T+S L+ AGL +A+H F M
Sbjct: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
GC +I+ AF S K + + + N++HK
Sbjct: 211 DYGCN-----ADII------------AFSNVISILCKKRRAVEAQSF------FDNLKHK 247
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
F+P Y L+ C D +++ EM+ G
Sbjct: 248 -------------------------FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAG 282
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+SPN +++I+IDA SG + A + M + G +P+ V + I+V +R+ R ++
Sbjct: 283 ISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVL 342
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ +MK + +L+TY L+ + +L E + L
Sbjct: 343 QVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVL 380
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 6/238 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ + V + + D+ A + K SPN+Y +ID G ++ ++ +
Sbjct: 253 IVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAE 312
Query: 282 LRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ N FN+L+ V+ A + L+VY M++L AD+ +YN L++ C N
Sbjct: 313 MLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDN 372
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + AK + +++ I + A ++ A ++ M G PNT+
Sbjct: 373 LGEAIKVLNSM----AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV 428
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ L+ A + L +EM + EPN L+ ++ A+ FR
Sbjct: 429 TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFR 486
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 160/393 (40%), Gaps = 57/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F VR + + A+ A++ + + + ++ +I + +++++ +++
Sbjct: 184 VTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDN 243
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ + ++ V+ SL++ A D+ V++ M+ G+ ++ +Y+I++ A C +G
Sbjct: 244 LKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +++ E+ L+A + T++ +++V A + L+V M + I
Sbjct: 303 ITRAHDVFAEM--LDAG--CNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 358
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++ LI + +A+ + M + C PN A F+ FR
Sbjct: 359 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPN-------------ASSFNPIFRC---- 401
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+A +D +G + M K KP T TYN
Sbjct: 402 ------IAKSQDVNGAHRMFARM------------------------KEVGCKPNTVTYN 431
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK-IMRE 576
ILM+ A + L EM + PN ++ LI G G+ A + ++ E
Sbjct: 432 ILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDE 491
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ P + Y ++ ++ +LK+ L ++M
Sbjct: 492 KCIKPSMPLYKMVLEELRKAGQLKKHEELVDKM 524
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M+ + +++++L+ +G A+ M + G + D++A++ I +
Sbjct: 170 LIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILC 229
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +A S F+ +KH + +P+++ Y +L+ R G + E + +V+++M AG
Sbjct: 230 KKRRAVEAQSFFDNLKH-KFEPDVIVYTSLVHGWCRAGDISEAE---SVFREMKMAG 282
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV+ YT+ + R+ + +A S+F EMK I PN+ TY ++ A R G ++ +
Sbjct: 250 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSG---QITRA 306
Query: 641 LAVYQDMWKAG 651
V+ +M AG
Sbjct: 307 HDVFAEMLDAG 317
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +NSL+N A + ++ M + V+ D+ SY+IL+ C A+++Y
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L +V TY+ + A V E+M+SAG +P+ IT+S+LI+
Sbjct: 182 QMIDLNCVP----NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ A +QA LFE M+ GC PN+ N LL + + D A LFR V
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM------VER 291
Query: 469 GEDYDGNTDR-----ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G D D T N+ K +Q++ V H P YN L+K
Sbjct: 292 GCDPDKVTYTTLLYGFCNV-GKIEQAVEVFDEMVSKGH----------DPDVVAYNCLLK 340
Query: 524 ACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++R + L M + P+ +S I+ID + ++ A+++ + M +D
Sbjct: 341 G----FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 396
Query: 578 -GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
G SPD+V Y + I +RL +A +F+E+ ++ P+ + LL A
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 52/307 (16%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN LL + C A A I+ + + + V+ DV +YS ++ F A K+
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTM--VSERSVVP-DVVSYSILIDGFCKIDELGRAEKL 179
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M+ PN T+++ +N G + A ++EEM+ AGC P+ + L+
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + D+A LF + ++ G
Sbjct: 240 ARKHDQAHELFEAM------ISRG------------------------------------ 257
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+P TYN L+ C + +A L +M G P+ +++T L+ G
Sbjct: 258 -----CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E A+++ M G PDVVAY +K R+ + +A LF+ M + +P+ V++
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372
Query: 624 LLRARSR 630
++ S+
Sbjct: 373 MIDGLSK 379
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 50/337 (14%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYS 367
L + + M K G DMA++++L+ C A AQE + G + + + F+Y+
Sbjct: 69 LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRAS---SCFSYN 125
Query: 368 TIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+++ AK A + M+S V P+ +++S LI+ + +A L+++M+
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
C PN N L L R ++ Q +++
Sbjct: 186 LNCVPNVTTYNAFLNG------------LMRKGRIADAQGV----------------YEE 217
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
S +P+ + YS+ FS + + L M + G P
Sbjct: 218 MISAGCSPDVIT---YSTLIHGFSLA--------------RKHDQAHELFEAMISRGCRP 260
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ L+ + A ++ + M E G PD V YTT + +++QA +F
Sbjct: 261 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVF 320
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+EM P++V Y LL+ R G E +Q V
Sbjct: 321 DEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
G ++ +YE++ S + ++ +++L++ HD E+++ M G +
Sbjct: 206 GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH--ELFEAMISRGCRPNAV 263
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN LL C A E++ + + +G D TY+T++ F + + A++V
Sbjct: 264 TYNCLLHGLCKESKPDEAHELF---RKMVERGC-DPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+S G P+ + ++ L+ AG +A LF+ M+ C+P++ NI++ +
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK 379
Query: 446 ACQFDRAFRLF 456
A + D A +F
Sbjct: 380 AKRLDDAVEVF 390
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 34/275 (12%)
Query: 397 NTITWSSLINACANAGLVEQAMH---LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
N + W++ + +G +EQA +E L + P+S C+ ++Q +A + D A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 454 RLF-----RSWTLSKTQVALGEDYDGNTDRISNMEH---------KDKQSITNTPNFVPN 499
L R + ++ + D+I + + S + N + N
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 500 S-------H-----YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLS 545
S H +S+ S P +Y+IL+ C + R + L +M +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ ++ G + A + + M G SPDV+ Y+T I +++ QA L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249
Query: 606 FEEMKHYQIQPNLVTYITLLRA---RSRYGSLHEV 637
FE M +PN VTY LL S+ HE+
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 284
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 46/421 (10%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G ++ +++++++ + ++Y ++ L++ + EV+K M+ G+
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ ++ SY+IL+ C G A E++ E+K+ G+L DV++YS ++ F
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKN---SGILP-DVYSYSILIDGFCRKGDMD 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+K E+M S +P+ + SLI + A+ F M + G P++ CN +L
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQ----SITNTPN 495
F++A L S + V Y+ RI +K + N
Sbjct: 463 SIYCRKPDFNKALAL--SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 496 FVPNS-HYSS----FDKR-------------------FSFKPTTTTYNILMKACCTDY-Y 530
+P+ +YS+ F KR F+ K T N+ + C D Y
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R+ M E R + P+ I++T L+ +G + A + M +G SP+VV YT I
Sbjct: 581 RLFKGMKESR---VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
++ + QA L+E+MK + P+ + Y L+ A G ++ + A++ +M +
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAE---ALFDEMKQE 694
Query: 651 G 651
G
Sbjct: 695 G 695
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 51/400 (12%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
F K+ + AL ++ K P++Y +ID G C GD + +E++ S N +
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILID--GFCRKGDMDSAIKFWEEMTSNNFS 417
Query: 289 LNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG--NTVLAQ 344
+ + + SL+ +F L+ ++ MQKLG+ D + N +L C N LA
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + GV + ++Y+ + + AL++ ML V P+ + +S+L
Sbjct: 478 S-----EKFQENGV-HFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
I+ A E+A+ LF +M + G N + IL+ + C+ D A+RLF+ S+
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591
Query: 465 ---QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTT 517
Q+A G NT ++ + FD+ R P T
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRAR-------------------ALFDEMSREGCSPNVVT 632
Query: 518 YNILMKACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
Y + +Y ++ L +M+ G+ P+ I +T+LI A +G + A +
Sbjct: 633 YTCFI----NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688
Query: 572 KIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M+++G +P+VV YT I ++ + QA L+EEM+
Sbjct: 689 DEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 18/301 (5%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N ++ C G A E++ E+K+ G+L DV++YS ++ F A +V
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKN---SGILP-DVYSYSILIDGFCRKGRVDQASEVF 338
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++M ++G+ PN ++S LI+ G V++A+ +FEEM +G P+ +IL+
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D A + + T + + N + +K KQ F
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSA-----FNYCSLIKGYYKSKQFANALKEF-------RIM 446
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
++ P T N ++ C D+ + AL + + G+ N S+ I
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ALQ+L +M + + PDVV Y+T I + ++A LF +M I N+ TY L
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 566
Query: 625 L 625
+
Sbjct: 567 I 567
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 67/379 (17%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ NV VF+ L+ V A + L+ V+ + G+ ++ S N LLK C +
Sbjct: 131 DVEKSNV-----VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLK-CLVED 184
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS----AGV 394
N V + EV K + ++ TY+ ++ F + ++ ++L +G
Sbjct: 185 NRVDGVRLLFEVL---IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE 241
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TPN +T+ + I GL A L + + + N+ C N ++ + D A
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 301
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F+ E K+ + P
Sbjct: 302 VFK-------------------------EMKNSGIL----------------------PD 314
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y+IL+ C +A + EMR G+ PN S++ILID G V+ AL++ +
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G+ PDV +Y+ I R + A +EEM P+ Y +L++ Y
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKG---YY 431
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ L ++ M K G
Sbjct: 432 KSKQFANALKEFRIMQKLG 450
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 207/506 (40%), Gaps = 90/506 (17%)
Query: 101 EGNVSKFASMLSLEMVASGIVKSI-----------REGRIDCVVGVLKKLNELGVAPLEL 149
+G + AS + EM SGI+ + R+GR+D V K++ G+ P +
Sbjct: 292 QGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILP-NI 350
Query: 150 FDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR----LPVKELDEEFRIVQLCVNKP 205
+ S L+ C+ G V+ +EV EE + LP ++ ++ K
Sbjct: 351 YSYS--ILIDGFCK----EGRVD---KALEVFEEMKNSGILP--DVYSYSILIDGFCRKG 399
Query: 206 DVNLAIRY------ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
D++ AI++ P A +C+ ++ + K + +AL+ + +K P+ C
Sbjct: 400 DMDSAIKFWEEMTSNNFSPSA-FNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458
Query: 260 RTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
I+ + D+ K+ A+ E + V N Y +N ++ + L++ M K
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
V+ D+ +Y+ L+ C A + + +K K + +V TY+ ++ +F
Sbjct: 519 RNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKM--TKVGITFNVKTYTILINLFISDC 574
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+A ++ + M + V P+ I ++SL+ N G + +A LF+EM + GC PN
Sbjct: 575 KMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPN----- 629
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
C + +L + +N HK
Sbjct: 630 ----VVTYTCFINEYLKLNK----------------------NNQAHK------------ 651
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG-LSPNHISWTIL 554
Y +R + P Y +L+ A C + R +AL +EM+ G +PN + +T L
Sbjct: 652 ---LYEKMKERGVY-PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707
Query: 555 IDACGGSGNVEGALQILKIMREDGMS 580
I++ + A ++ + MR G+S
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAKGLS 733
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 189/422 (44%), Gaps = 28/422 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYED 281
FCN R + +L+S + A D H +PN+ T+ID G+C M RA +++
Sbjct: 174 FCNEKRA-EEALELLSMM-ADDGDGSH--TPNVVTYTTVID--GLCKAQMVDRAKGVFQH 227
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + V N + + L++ ++ K +++ + M G+ D Y +LL C G
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGR 287
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ I+ V KG+ K +V Y ++ +A + M+ GV+P+
Sbjct: 288 CTEARNIFDSVIR---KGI-KPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHH 343
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ + A A ++++AMH+F++M Q PN L+ A + + D A F
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ D + + + DK F D+ + T +N
Sbjct: 404 I----DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFF------EVLDQ--GIRLDTVFFN 451
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM C + ++A L++ M VG+ P+ IS+ L+D +G ++ A ++L ++
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PD V Y T + +++R+ A+SLF EM + P++VTY T+L + G E
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571
Query: 638 QQ 639
++
Sbjct: 572 KE 573
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 161/401 (40%), Gaps = 59/401 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I+FC + KK + A+ +D ++ SPN+ +ID G + +
Sbjct: 346 NIMFC----AYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + +T +I+VF+SL+ + E++ + G+ D +N L+ C G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ AQ + L + ++ DV +Y+T+V A K+ + ++S G+ P+
Sbjct: 462 RVMEAQRLI----DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDK 517
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++L++ A ++ A LF EML G P+ N +L + +F A L+ S
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
S+TQ+ + TY
Sbjct: 578 MINSRTQMNI-----------------------------------------------YTY 590
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NI++ C + + +A + + + + L + + I+I A G E A+ + +
Sbjct: 591 NIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISA 650
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G+ PDV Y + ++ L++ LF M+ PN
Sbjct: 651 YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPN 691
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M + G D+ SY+ILLK C A E+ + + G +V TY+T++
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMAD-DGDGSHTPNVVTYTTVIDG 211
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A+ A V + M+ GV PN T++ LI+ + G ++ + + +EM G +P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 433 SQCCNILLQ------ACVEACQ-FDRAFRLFRSWTLSKTQVAL-GEDYDGNTDRISNMEH 484
+LL C EA FD R ++ + L G +G+ +S M
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS---LSEMHS 328
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE------ 538
+ N + P+ H +NI+ A Y KA+++E
Sbjct: 329 FLDLMVGNGVS--PDHH---------------IFNIMFCA-----YAKKAMIDEAMHIFD 366
Query: 539 -MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
MR LSPN +++ LIDA G V+ A+ M ++GM+PD+ +++ +
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ ++A LF E+ I+ + V + TL+ R G + E Q+ +
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLI 470
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 44/280 (15%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN-TITWSSLINACANAGLVEQAMH-LF 421
FTY+ ++ F + +L G N T+ +S L+ +A V++A L
Sbjct: 93 FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILL 152
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M + GC P+ +ILL+ + + A L + +D DG
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLS---------MMADDGDG------- 196
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
++TPN V TT + L KA D R K + M
Sbjct: 197 ---------SHTPNVVT---------------YTTVIDGLCKAQMVD--RAKGVFQHMID 230
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ PN+ ++T LI G + +Q+L+ M G+ PD Y + ++ R +
Sbjct: 231 KGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTE 290
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A ++F+ + I+PN+ Y LL + GSL E+ L
Sbjct: 291 ARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKAC 334
+++ ++ + +T ++ +N++++ +F+ E+Y +M ++ +YNI++
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C E + L +K L+LD+FT + ++ + A+ + + + G+
Sbjct: 598 C---KNNFVDEAFKMFHSLCSKD-LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ T+ + G +E+ LF M + G PNS+ N L++ + +RA
Sbjct: 654 VPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 58/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDE--------------------------------------AGLKPDV 530
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ E L + +M + G
Sbjct: 651 MKEA---LYFHSEMIEKG 665
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 44/331 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SK L +A SL +EM I+P +VTY L+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 139/350 (39%), Gaps = 59/350 (16%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G C G ++ ++ + + VT N+ + +L + D+ E+ M G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C AGN L Q + + EA LK DV+TY+TI+ +K A
Sbjct: 494 NIFTYNSLINGLCKAGN--LEQAMRTMIDMDEAG--LKPDVYTYTTIIGALCQSKELDRA 549
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-Q 441
+ ++ML G+ P +T++ L+N +G VE L E ML+ PN+ N L+ Q
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C+E K + E Y G + VPN +
Sbjct: 610 YCIE-----------------KNMKSTTEIYKGMLSQ----------------EVVPNEN 636
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACG 559
TYNIL+K C +AL +EM G S+ LI
Sbjct: 637 ---------------TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A ++ + MR++ ++ + Y I + L+ +L +E+
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
FD+ S P TY I++ CT + L++EM GL N +++T +I G
Sbjct: 276 FDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEG 334
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V A+++++ M G+ D +TT + R L A + F+EM+ + + VTY
Sbjct: 335 QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYT 394
Query: 623 TLLRARSRYGSLHEVQQCLAVYQD 646
L+ R G L E ++ L +D
Sbjct: 395 ALINGLCRAGELKEAERVLQEMED 418
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 166/394 (42%), Gaps = 67/394 (17%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNM 315
+Y +++ + C + + M + +R+ N+ L + + +MN EVY+ M
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNK-------AQEVYETM 265
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G+M + ++N +L +C AG+ +I+ E+K + ++ TY+ ++ F+
Sbjct: 266 VMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK----RRNIEFSEVTYNILINGFSK 321
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ + A + DM +G +++ LI GL ++A + +EML AG P +
Sbjct: 322 SGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTST 381
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
NI ++A E + D A L S
Sbjct: 382 YNIYIRALCEFGRIDDARELLSSMA----------------------------------- 406
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
P +YN LM V+A L ++++ ++P+ +++
Sbjct: 407 ----------------APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID SGN+EGA ++ + M + PDV+ YTT +K V++ L A +++EM
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I+P+ Y T R G + ++ ++++M
Sbjct: 511 IKPDGYAYTTRTVGELRLG---DSEKAFRLHEEM 541
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 184/453 (40%), Gaps = 51/453 (11%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V R R + A Y+ H P + T++D C GD + I+ +++
Sbjct: 242 CNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 301
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+N+ + +N L+N + ++ + +MQ+ G S+N L++ C G
Sbjct: 302 RRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQG--- 358
Query: 342 LAQEIYGEVKHLEAKGVLKL------------------------------DVFTYSTIVK 371
L E +G + G+ DV +Y+T++
Sbjct: 359 LFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMH 418
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + + A + +D+ + + P+ +T+++LI+ +G +E A L EEM P
Sbjct: 419 GYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYP 478
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD-KQSI 490
+ LL+ V+ A ++ L K G Y T + + D +++
Sbjct: 479 DVITYTTLLKGFVKNGNLSMATEIYDE-MLRKGIKPDGYAYTTRT--VGELRLGDSEKAF 535
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
V H++ P T YN+ + C KA+ ++ VGL P+H
Sbjct: 536 RLHEEMVAEDHHA---------PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDH 586
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++T +I G + A + M +SP V+ Y I ++ RL+QAF E
Sbjct: 587 VTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTE 646
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
MK ++PN++T+ LL + G++ E + L
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYL 679
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 191/429 (44%), Gaps = 45/429 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ C ++ V K++ +YE + + + FN++++ A DL+ ++
Sbjct: 237 PSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKI 296
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M++ + +YNIL+ +G A+ +G+++ + + ++++ +++
Sbjct: 297 WLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQ----RSGFPVTPYSFNPLIE 352
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A V ++ML+AG+ P T T++ I A G ++ A E+L + P
Sbjct: 353 GYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA----RELLSSMAAP 408
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNME--HKD 486
+ N L+ ++ +F A LF ++ ++ + V DG + N+E +
Sbjct: 409 DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCES-GNLEGAQRL 467
Query: 487 KQSITNT---PN----------FVPNSHYSS----FDK--RFSFKP-----TTTTYNILM 522
K+ +T+ P+ FV N + S +D+ R KP TT T L
Sbjct: 468 KEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELR 527
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+R+ M + +P+ + + ID GN+E A++ + + G+ PD
Sbjct: 528 LGDSEKAFRLHEEM--VAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPD 585
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V YTT I+ + R K A L++EM ++ P+++TY L+ ++ G L +Q
Sbjct: 586 HVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRL---EQAFQ 642
Query: 643 VYQDMWKAG 651
+M K G
Sbjct: 643 YSTEMKKRG 651
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ + I++ S + A ++ + M G+ P V+ + T + C ++ L++
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ EMK I+ + VTY L+ S+ G + E ++ + DM ++G
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARR---FHGDMQRSG 339
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ V ++ G+ K DV T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEV---VSRMKEDGI-KPDVVTVNTIVGGMCRHHGLNMAVLF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + +E+AMH F++ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME +
Sbjct: 524 VRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE-------- 575
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR L P ++
Sbjct: 576 ----------------GMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+I+A G + AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 177/415 (42%), Gaps = 42/415 (10%)
Query: 250 HLSSPN-MYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDL- 305
H SPN +++ R I +C + + A I DL L FN+L++ ++
Sbjct: 253 HGVSPNSVWLTRFI---SSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMN 309
Query: 306 --KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKL 361
+ V K M ++ + D+ + IL+ C + A +++ ++ K + V+K
Sbjct: 310 IGRMNALVLK-MDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKA 368
Query: 362 DVFTYSTIV----KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
D ++T++ KV + ++ +++K + PNT+T++ LI+ AG +E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMK---MEERCVPNTVTYNCLIDGYCRAGKLETA 425
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ M + G +P+ N ++ + A F E GN
Sbjct: 426 KEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDME--------KEGVKGNVV 477
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF--KPTTTTYNILMKACCT---DYYRV 532
+ H + + N H+ FDK P Y L+ C D+ +
Sbjct: 478 TYMTLIH----ACCSLSNIEKAMHW--FDKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ ++ ++R G S + +++ +LI N E ++L M ++GM PD + Y T I
Sbjct: 532 R-VVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISF 590
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ K + + E+M+ ++ P + TY ++ A Y S+ E+ + L +++DM
Sbjct: 591 FGKHKDFESVERMMEQMREDELDPTVATYGAVIEA---YCSVGELGEALKLFKDM 642
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+EDG+ PDVV T + R L A
Sbjct: 404 PNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A SL +++ + + M +AG
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSLSNIEKAMHWFDKMLEAG 506
>gi|297737368|emb|CBI26569.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 148/319 (46%), Gaps = 41/319 (12%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ +++ M+ LG + SY +++A G T+ A+ I+ E+ HL LKLD+
Sbjct: 81 DVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLG----LKLDL 136
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++ V+ D W+ A+++ ++ GV+ + ++S+I+ G + +A+ +FE+
Sbjct: 137 ----RVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEK 192
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G +P+ N L+Q +A +A L A+ D G R
Sbjct: 193 MQEEGVKPDIMTWNSLIQWHCKAGDVGKA--------LDGAIYAILVDIYGQYGRFQG-- 242
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-----CCTDYYRVKALMNE 538
P S+ K +P+ + + +L A C +V LM
Sbjct: 243 --------------PEECISAL-KSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLME- 286
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
T G+ PN I +LI+A G +G AL + +++ G+SPDVV Y+T +K C+R+++
Sbjct: 287 --TEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARK 344
Query: 599 LKQAFSLFEEMKHYQIQPN 617
+ ++EEM+ P+
Sbjct: 345 FDKVPEIYEEMESAGCTPD 363
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
G + K+ I ++R V+L+ ++NS+++ +L LEV++ MQ+ GV D+ ++
Sbjct: 146 GMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTW 205
Query: 328 NILLKACCLAGNT---------VLAQEIYGE----------VKHLEAKGVLKLDVFTYST 368
N L++ C AG+ + +IYG+ + L+++G+ + +
Sbjct: 206 NSLIQWHCKAGDVGKALDGAIYAILVDIYGQYGRFQGPEECISALKSEGI-QPSASMFCV 264
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ +A + +KV + M + G+ PN I + LINA AG +A+ ++ + G
Sbjct: 265 LANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTG 324
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF 456
P+ + L++AC+ A +FD+ ++
Sbjct: 325 ISPDVVTYSTLMKACIRARKFDKVPEIY 352
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 137/328 (41%), Gaps = 40/328 (12%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ C G+ A ++ + +EA G L + +Y+T+++ A +
Sbjct: 69 YNARIRESCRVGDVDKAMKLLAQ---MEALG-FSLSLGSYTTVIEALGSVGRTLEAEAIF 124
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+M+ G+ + +I + G+ ++AM + E+ + G + + N ++ +
Sbjct: 125 REMVHLGLKLDL----RVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKC 180
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ A +F M+ + + T N + H + D
Sbjct: 181 GELSEALEVFE-----------------------KMQEEGVKPDIMTWNSLIQWHCKAGD 217
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGN 563
+ Y IL+ Y R + ++ +++ G+ P+ + +L +A G
Sbjct: 218 VGKALD--GAIYAILVDIY-GQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGL 274
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E +++L++M +G+ P+++ I + R +A S++ +K I P++VTY T
Sbjct: 275 CEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYST 334
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++A R +V + +Y++M AG
Sbjct: 335 LMKACIRARKFDKVPE---IYEEMESAG 359
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 210 AIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
A++ I P A +FC + ++ ++ + PN+ + +I+ GI
Sbjct: 249 ALKSEGIQPSAS-MFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIA 307
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASY 327
G ++++ ++Y ++ ++ ++ +++LM KF E+Y+ M+ G D +
Sbjct: 308 GRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAR 367
Query: 328 NILLKA 333
+L A
Sbjct: 368 EMLQTA 373
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 138/320 (43%), Gaps = 55/320 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M G D+ +YN+L+ C G A + + ++ +V T++
Sbjct: 36 MKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQP----NVITHNI 91
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I++ W A K+ +M+ G +P+ +T++ LIN GL+ +A+ + E+M G
Sbjct: 92 ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS N LL + + DRA +
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEI------------------------------ 181
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
V Y P TYN ++ A C D +V A L+N++ + G S
Sbjct: 182 -------MVSRGCY----------PDIVTYNTMLTALCKDG-KVDAAVELLNQLSSKGCS 223
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P I++ +ID G + A+++L MR G+ PDV+ Y++ I R ++++A
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283
Query: 606 FEEMKHYQIQPNLVTYITLL 625
F +++ + ++PN TY +++
Sbjct: 284 FHDVEGFGVKPNAFTYNSIM 303
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 383 LKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
++V + L P+ IT++ LI A CA +G V QAM L +EM GC+P+ N+L+
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESG-VGQAMKLLDEMGSRGCKPDVVTYNVLVN 59
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A + S Y + I++ + +S+ +T ++
Sbjct: 60 GMCKEGRLDEAIKFLNSMP----------SYGSQPNVITH--NIILRSMCSTGRWMDAEK 107
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+ R P+ T+NIL+ C +A+ + +M T G +PN +S+ L+
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFC 167
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
++ A+Q L+IM G PD+V Y T + + ++ A L ++ P L+
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY T++ S+ G + Q + + +M G
Sbjct: 228 TYNTVIDGLSKVG---KTDQAVELLHEMRGKG 256
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL++A C A ++ E + ++G K DV TY+ +V A
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDE---MGSRGC-KPDVVTYNVLVNGMCKEGRLDEA 70
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K M S G PN IT + ++ + + G A L EM++ GC P+ NIL+
Sbjct: 71 IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
RA + T PNS
Sbjct: 131 LCRKGLLGRAIDILEKMP--------------------------------THGCTPNS-- 156
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
+YN L+ C + +A+ + M + G P+ +++ ++ A
Sbjct: 157 -------------LSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCK 203
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A+++L + G SP ++ Y T I + + QA L EM+ ++P+++T
Sbjct: 204 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVIT 263
Query: 621 YITLLRARSRYGSLHE 636
Y +L+ SR G + E
Sbjct: 264 YSSLIAGLSREGKVEE 279
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 32/285 (11%)
Query: 204 KPDV---NLAIRYACIVPRAD--ILFCNFVREFGKK----------RDLVSALRAYDASK 248
KPDV N+ + C R D I F N + +G + R + S R DA K
Sbjct: 48 KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEK 107
Query: 249 ------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV 300
+ SP++ +I+ +C + RAI E + + T N +N L++
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINF--LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ K ++ + M G D+ +YN +L A C G A E+ + L +KG
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVEL---LNQLSSKGC 222
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ + TY+T++ + A+++ +M G+ P+ IT+SSLI + G VE+A+
Sbjct: 223 SPV-LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
F ++ G +PN+ N ++ +A Q DRA F ++ +SK
Sbjct: 282 KFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAID-FLAYMISK 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 145/350 (41%), Gaps = 40/350 (11%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M SR D+ + NV +N ++ +KF +M G ++ ++NI+
Sbjct: 40 DEMGSRGCKPDVVTYNVLVNGMCKEGRLD---EAIKF----LNSMPSYGSQPNVITHNII 92
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L++ C G + A+++ E+ KG V T++ ++ A+ + E M
Sbjct: 93 LRSMCSTGRWMDAEKLLTEMVR---KGC-SPSVVTFNILINFLCRKGLLGRAIDILEKMP 148
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ G TPN+++++ L++ +++A+ E M+ GC P+ N +L A + + D
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208
Query: 451 RAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
A L + ++ V G G TD+ + H+ + +S
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268
Query: 503 SSFDKR---------------FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLS 545
+ + F KP TYN +M C +A+ + M + G
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCK 328
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
P +S+TILI+ G + AL++L + G VV ++A +V VR
Sbjct: 329 PTEVSYTILIEGIANEGLAKEALELLNELCSRG----VVKKSSAEQVVVR 374
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 242 RAYDASKK---HLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNS 296
RA D +K H +PN ++ G C + RAI E + S+ +I +N+
Sbjct: 139 RAIDILEKMPTHGCTPNSLSYNPLLH--GFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196
Query: 297 LMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
++ D K +E+ + G + +YN ++ G T A E+ E++
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR--- 253
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG LK DV TYS+++ + + A+K D+ GV PN T++S++ A
Sbjct: 254 GKG-LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++A+ M+ GC+P IL++
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEG 340
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 507 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 562
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 563 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 622
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 623 TYNIMMDLHAKARNYQNALKLYR----------------------------DMQNA---- 650
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 651 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 695
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 696 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 755
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 756 GLRPSLQTYTLLL 768
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 439 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 492
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 493 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 552
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A +++ M+ T T
Sbjct: 553 TYCTLIDIHAKAGFLDIAMDMYQ-----------------------RMQAGGLSPDTFTY 589
Query: 495 NFVPN-----SHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRT 541
+ + N H + K F P TYNI+M A +Y L +M+
Sbjct: 590 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 649
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G P+ ++++I+++ G G +E A + M++ PD Y + + ++ +++
Sbjct: 650 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 709
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A+ ++ M H ++PN+ T +LL R + E + L
Sbjct: 710 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 749
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 552 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 611
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 612 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 671
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 672 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 727
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++ + +A L + ML G P+ Q +LL C + + D F
Sbjct: 728 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 782
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T TYN L+ + Y +A+ N+M+ G P+ +++ LID +G ++ A+
Sbjct: 513 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 572
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L A
Sbjct: 573 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 632
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 633 KAR-----NYQNALKLYRDMQNAG 651
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 517 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 576
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 577 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 636
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 637 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 692
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 693 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST------FLRVNKIAEAY 746
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 747 ELLQNMLALG 756
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 484 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 543
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 544 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 603
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 604 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 659
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 660 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 716
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 56/252 (22%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 483 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF--- 539
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY- 518
++ Q A KP TY
Sbjct: 540 --NQMQEA------------------------------------------GCKPDRVTYC 555
Query: 519 ---NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M
Sbjct: 556 TLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 613
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L
Sbjct: 614 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 673
Query: 636 EVQQCLAVYQDM 647
E + AV+ +M
Sbjct: 674 EAE---AVFTEM 682
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 473 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 532
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M G
Sbjct: 533 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRMQAGG 581
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 462 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 519
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + YG + + + + V+ M +AG
Sbjct: 520 NRLIHS---YGRANYLNEAMNVFNQMQEAG 546
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 36/390 (9%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN L++ A KF L + + MQ+LG+ ++ +YNIL+ C LA +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + + T S+++ + K A+ + + M+ G P+TIT+++LI+
Sbjct: 69 GKMMKLGYEP----SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+Q GC+PN +++ + D AF L +K +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 468 LGEDYDGNTDRISNMEH--------KDKQSITNTPNFVPNS----------HYSSFDKRF 509
+ ++ D + H K+ ++ PN V S +S +
Sbjct: 185 V-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 510 S------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S P T+N L+ A + + + L ++M + P+ ++ LI+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A Q+ + M PD+ Y T IK +SKR++ LF EM H + + VTY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TL++ G Q+ V++ M G
Sbjct: 364 TTLIQGLFHDGDCDNAQK---VFKQMVSDG 390
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 148 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 378
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 379 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK P+ TY TL+RA R G
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 156 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 210
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 211 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 325
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 326 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 382
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 383 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 495
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 367
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 368 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 459
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 460 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 483
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 484 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 610 K 610
+
Sbjct: 527 R 527
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 62/401 (15%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P A +++ + +R F G+K D + Y+ + SP++ + T +D G+
Sbjct: 511 IPNA-VVYTSLIRNFFKCGRKED---GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K RA+++++++ + + L++ V A E++ M++ G + D +YN ++
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G A ++ E+K KG + V TY +++ A A + E+ S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMK---TKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ N + +SSLI+ G +++A + EE++Q G PN N LL A V+A +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F+S + + TPN++
Sbjct: 743 ALVCFQSM----------------------------KDLKCTPNYI-------------- 760
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TY+IL+ C + + EM+ G PN ++T +I +GN+ A
Sbjct: 761 -----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ + +E G D Y I+ + R A+ LFEE +
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 195/481 (40%), Gaps = 77/481 (16%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ + +AL D K + P++ + ID G G + + ++
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEM 296
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + L+ + S++ V A L +E++++M + + +YN ++ +AG
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ KG + V +Y+ I+ ALK E+M + PN T
Sbjct: 357 ---EDAYSLLERQRRKGCIP-SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
++ +I+ AG +E A+ + + M AG PN NI++ +A + D A +F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471
Query: 457 ----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R ++ + G G D + ++ PN V Y+S + F FK
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKL-YEQMLDANQIPNAVV---YTSLIRNF-FK 526
Query: 513 -----PTTTTYNILMKACCT-----------------DYYRVKALMNEMRTVGLSPNHIS 550
YN +++ C+ + + +AL E++ +G P+ S
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 551 WTILI-----------------------------------DACGGSGNVEGALQILKIMR 575
+TILI D SG V A Q+L+ M+
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G P VV Y + I + RL +A+ LFEE K I+ N+V Y +L+ + G +
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706
Query: 636 E 636
E
Sbjct: 707 E 707
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 187/448 (41%), Gaps = 40/448 (8%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D S L + ++ P++ I+ G G ++ +E+++ + N+
Sbjct: 354 GKFEDAYSLL---ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NL 409
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N ++++ A L+ L V M+ G+ ++ + NI++ C A A I+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ H + D TY ++++ A K+ E ML A PN + ++SLI
Sbjct: 470 LDH----KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------R 457
G E ++ EML+ GC P+ N + +A + ++ LF R
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 458 SWT-LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV---------PNSHYSSFD- 506
S+T L V G ++ + M+ + T N V N Y +
Sbjct: 586 SYTILIHGLVKAGFAHEA-YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K +PT TY ++ +A M E ++ G+ N + ++ LID G G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A I++ + + G++P+V + + V+++ + +A F+ MK + PN +TY
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + + + + +Q+M K G
Sbjct: 765 LIHGLCK---IRKFNKAFVFWQEMQKQG 789
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 155/378 (41%), Gaps = 59/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+++ ++ +N+++F +L+ V A + + L + M+ + D+ YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG +A + + E+K A G++ LD TY++++ V A A+++ E M
Sbjct: 282 KAGKVDMAWKXFHEMK---ANGLV-LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P ++++I AG E A L E + GC P+ N +L Q D A +
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F E K +I P
Sbjct: 398 F--------------------------EEMKKDAI----------------------PNL 409
Query: 516 TTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+TYNI++ C AL+ + M+ GL PN I+ I++D + ++ A I +
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ PD V Y + I+ R R+ +A+ L+E+M PN V Y +L+R + G
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y +M + G
Sbjct: 530 KEDGHK---IYNEMLRLG 544
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/443 (19%), Positives = 192/443 (43%), Gaps = 32/443 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+K + AL+ ++ KK + PN+ +ID+ G + + + ++ + N
Sbjct: 385 LGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N +++ A L +++ + D +Y L++ G A ++Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L+A + + Y+++++ F + K+ +ML G +P+ + ++ ++
Sbjct: 504 QM--LDANQIP--NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------T 460
AG +E+ LF+E+ G P+++ IL+ V+A A+ LF + T
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF--- 511
+ V G G ++ + M+ K + T V + + D+ +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 512 -KPTTTTYNILMKACCTDYY----RVKA---LMNEMRTVGLSPNHISWTILIDACGGSGN 563
K N+++ + D + R+ +M E+ GL+PN +W L+DA +
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL + M++ +P+ + Y+ I + ++ +AF ++EM+ +PN+ TY T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 624 LLRARSRYGSLHEVQQCLAVYQD 646
++ ++ G++ E +++
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKE 822
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 57/344 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L +++ MQ+LG ++ + L++ G A + E+K L+ DV Y+
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK----SNSLEPDVVLYNV 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ F A MA K +M + G+ + +T++S+I A + +A+ LFE M Q
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P + N ++ A +F+ A+ L
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLER------------------------------ 365
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+R P+ +YN ++ +AL EM+ + P
Sbjct: 366 -----------------QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-P 407
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++ I+ID +G +E AL + M++ G+ P+V+ + +++RL A S+F
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
E + H +P+ VTY +L+ R+G + E + +Y+ M A
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK---LYEQMLDA 508
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 195/477 (40%), Gaps = 71/477 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ N + RD L + ++ + N+++ T+I V G + ++ ++++
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY----NILLKA---- 333
S ++ ++ ++N ++ A + + + M+ G++ D +Y +L KA
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322
Query: 334 ----------------CCLAGNTVLA--------QEIYGEVKHLEAKGVLKLDVFTYSTI 369
C A NT++ ++ Y ++ KG + V +Y+ I
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP-SVVSYNCI 381
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ALK E+M + PN T++ +I+ AG +E A+ + + M AG
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISN 481
PN NI++ +A + D A +F R ++ + G G D
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----PTTTTYNILMKACCT--------- 527
+ ++ PN V Y+S + F FK YN +++ C+
Sbjct: 501 L-YEQMLDANQIPNAVV---YTSLIRNF-FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 528 --------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + +AL E++ +G P+ S+TILI +G A ++ M+E G
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D AY T I +S ++ +A+ L EEMK +P +VTY +++ ++ L E
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A ++ +K N+ I ++ID G G ++ I E+L + +T N+Y +N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ V A ++ L +++M+ L + +Y+IL+ C A + E++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ--- 786
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K K +VFTY+T++ A A A + E G ++ ++++I +NA
Sbjct: 787 -KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEAC--------QFDRAFRLFRSWT 460
A LFEE GC ++ C +LL + C+E + +A RSWT
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
++ F+P + Y L+ A T D + L +M+ +G + N +T LI G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + + PDVV Y I ++ ++ A+ F EMK + + VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 625 LRARSRYGSLHE 636
+ + L+E
Sbjct: 312 IGVLCKADRLNE 323
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ MR + P ++T LI A S + + L + + M+E G + +V +TT I+V
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTY 621
R R+ A SL +EMK ++P++V Y
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLY 273
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 178/397 (44%), Gaps = 25/397 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ +I G + ++ + ++ +I ++N L+ F+ ++
Sbjct: 57 PDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKY 116
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ G++ D +Y +L AC GN E E++ + +K D YS ++
Sbjct: 117 FSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMR----EAGIKPDQVAYSILID 172
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+F A + A ++ +G P+++ +++LI+A A G+V+QA +F+E ++ C
Sbjct: 173 MFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLD 232
Query: 432 NSQCCNILLQACVEACQFDRAF---RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ ++Q +A D+A +L + L ++ G + N + Q
Sbjct: 233 DPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGS--------VLNAFMRANQ 284
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH 548
+ F + RF T N+ KA + + L+ +MR +G N
Sbjct: 285 PMGAIKLF---EEMQESNCRFGESTYITMLNVYSKAGF--HSAAEELLAKMRQLGFRRNV 339
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LID G G ++ A ++ M++ G +++ Y T + + ++ R+ A L E
Sbjct: 340 VAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAE 399
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+K ++ P+ VTY TL+ A +R G E C+ V++
Sbjct: 400 LKDSKLVPDTVTYTTLINAYNRLGRFEE---CIRVFE 433
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ LG D+ YNIL+ GN A + + ++K +G+L D TY ++
Sbjct: 82 FSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKD---EGLLP-DSGTYCAVLS 137
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++M AG+ P+ + +S LI+ AG E A F E+ +G P
Sbjct: 138 ACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLP 197
Query: 432 NSQCCNILLQACVEACQFDRAFRLF----RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+S N L+ A + D+A +F RS+ L + R+++
Sbjct: 198 DSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMAD------ 251
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
Q++ H K +P Y ++ A + A L EM+
Sbjct: 252 QAL----------HVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCR 301
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
++ +++ +G A ++L MR+ G +VVAY+T I + + +L++A L
Sbjct: 302 FGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRL 361
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
F MK + NL+ Y T+L + G +++ ++ +A +D
Sbjct: 362 FSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKD 402
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 135/371 (36%), Gaps = 61/371 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ +ID+ G G + + A + +L
Sbjct: 162 PDQVAYSILIDMFGKAGRHEDAAATFREL------------------------------- 190
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
Q G + D +YN L+ A G A ++ E + + D + T+++V+
Sbjct: 191 --QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQ----RSFCLDDPVIFYTMIQVY 244
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A A+ AL V + M G+ PN + + S++NA A A+ LFEEM ++ C
Sbjct: 245 AKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGE 304
Query: 434 QCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGE--DYDGNTDRISNMEHKDKQ 488
+L +A A L R + VA D G ++
Sbjct: 305 STYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEA------ 358
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSP 546
+ S K+ K YN + M + LM E++ L P
Sbjct: 359 -----------TRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVP 407
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++T LI+A G E +++ + R DG+ D + I V ++++ + L
Sbjct: 408 DTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELL 467
Query: 607 EEMKHYQIQPN 617
E M IQP+
Sbjct: 468 EVMPKSGIQPD 478
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F ++ + K R AL K+ PN ++++ M + ++E+
Sbjct: 235 VIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEE 294
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ N + +++NV A E+ M++LG ++ +Y+ L+ G
Sbjct: 295 MQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGK 354
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ +K KG ++ Y+T++ ++ A A ++ ++ + + P+T+
Sbjct: 355 LQEATRLFSTMKQQGCKG----NLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTV 410
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LINA G E+ + +FE+ G + + I++ +A Q+ + L
Sbjct: 411 TYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVM 470
Query: 460 TLSKTQ 465
S Q
Sbjct: 471 PKSGIQ 476
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
++M+ +G P+ + + ILI G GN A++ ++++G+ PD Y + C +
Sbjct: 83 SKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKV 142
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + +EM+ I+P+ V Y L+ +G + A ++++ +G
Sbjct: 143 GNIDKGNETLKEMREAGIKPDQVAYSILI---DMFGKAGRHEDAAATFRELQMSG 194
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 44/301 (14%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D + VLK + E+G+ P EL GS Q + G +++ EE +
Sbjct: 251 DQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPM----------GAIKLFEEMQESNC 300
Query: 190 ELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
E I L V A A+ L +R+ G +R++V AY
Sbjct: 301 RFGESTYITMLNVYSK--------AGFHSAAEELLAK-MRQLGFRRNVV----AYS---- 343
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKF 307
T+ID+ G G ++ ++ ++ Q N+ V+N+++++ A +
Sbjct: 344 -----------TLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRIND 392
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ ++ ++ D +Y L+ A G +E + A G LKLD +
Sbjct: 393 AERLMAELKDSKLVPDTVTYTTLINAYNRLGRF---EECIRVFEQHRADG-LKLDRILVA 448
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ V+ A+ + ++ E M +G+ P+T +++ + G+ E A L ++ +
Sbjct: 449 IMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINEL 508
Query: 428 G 428
G
Sbjct: 509 G 509
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 62/401 (15%)
Query: 217 VPRADILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+P A +++ + +R F G+K D + Y+ + SP++ + T +D G+
Sbjct: 511 IPNA-VVYTSLIRNFFKCGRKED---GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K RA+++++++ + + L++ V A E++ M++ G + D +YN ++
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +G A ++ E+K KG + V TY +++ A A + E+ S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMK---TKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ N + +SSLI+ G +++A + EE++Q G PN N LL A V+A +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F+S + + TPN++
Sbjct: 743 ALVCFQSM----------------------------KDLKCTPNYI-------------- 760
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TY+IL+ C + + EM+ G PN ++T +I +GN+ A
Sbjct: 761 -----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ + +E G D Y I+ + R A+ LFEE +
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 193/478 (40%), Gaps = 71/478 (14%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF +R F ++ + +AL D K + P++ + ID G G + + ++
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM 296
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ + L+ + S++ V A L +E++++M + + +YN ++ +AG
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ KG + V +Y+ I+ ALK E+M + PN T
Sbjct: 357 ---EDAYSLLERQRRKGCIP-SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---- 456
++ +I+ AG +E A+ + + M AG PN NI++ +A + D A +F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471
Query: 457 ----RSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS 510
R ++ + G G D + + D I N V S +F K
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA--VVYTSLIRNFFKCGR 529
Query: 511 FKPTTTTYNILMKACCT-----------------DYYRVKALMNEMRTVGLSPNHISWTI 553
+ YN +++ C+ + + +AL E++ +G P+ S+TI
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589
Query: 554 LI-----------------------------------DACGGSGNVEGALQILKIMREDG 578
LI D SG V A Q+L+ M+ G
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
P VV Y + I + RL +A+ LFEE K I+ N+V Y +L+ + G + E
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDE 707
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 155/378 (41%), Gaps = 59/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+++ ++ +N+++F +L+ V A + + L + M+ + D+ YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG +A + + E+K A G++ LD TY++++ V A A+++ E M
Sbjct: 282 KAGKVDMAWKFFHEMK---ANGLV-LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P ++++I AG E A L E + GC P+ N +L Q D A +
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F E K +I P
Sbjct: 398 F--------------------------EEMKKDAI----------------------PNL 409
Query: 516 TTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+TYNI++ C AL+ + M+ GL PN I+ I++D + ++ A I +
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ PD V Y + I+ R R+ +A+ L+E+M PN V Y +L+R + G
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y +M + G
Sbjct: 530 KEDGHK---IYNEMLRLG 544
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 187/448 (41%), Gaps = 40/448 (8%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D S L + ++ P++ I+ G G ++ +E+++ + N+
Sbjct: 354 GKFEDAYSLL---ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NL 409
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N ++++ A L+ L V M+ G+ ++ + NI++ C A A I+
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ H + D TY ++++ A K+ E ML A PN + ++SLI
Sbjct: 470 LDH----KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------R 457
G E ++ EML+ GC P+ N + +A + ++ LF R
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 458 SWT-LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV---------PNSHYSSFD- 506
S+T L V G ++ + M+ + T N V N Y +
Sbjct: 586 SYTILIHGLVKAGFAHEA-YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 507 -KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGN 563
K +PT TY ++ +A M E ++ G+ N + ++ LID G G
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
++ A I++ + + G++P+V + + V+++ + +A F+ MK + PN +TY
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + + + + +Q+M K G
Sbjct: 765 LIHGLCK---IRKFNKAFVFWQEMQKQG 789
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/443 (19%), Positives = 192/443 (43%), Gaps = 32/443 (7%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G+K + AL+ ++ KK + PN+ +ID+ G + + + ++ + N
Sbjct: 385 LGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ N +++ A L +++ + D +Y L++ G A ++Y
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L+A + + Y+++++ F + K+ +ML G +P+ + ++ ++
Sbjct: 504 QM--LDANQIP--NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------T 460
AG +E+ LF+E+ G P+++ IL+ V+A A+ LF + T
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 461 LSKTQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSF--- 511
+ V G G ++ + M+ K + T V + + D+ +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 512 -KPTTTTYNILMKACCTDYY----RVKA---LMNEMRTVGLSPNHISWTILIDACGGSGN 563
K N+++ + D + R+ +M E+ GL+PN +W L+DA +
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ AL + M++ +P+ + Y+ I + ++ +AF ++EM+ +PN+ TY T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 624 LLRARSRYGSLHEVQQCLAVYQD 646
++ ++ G++ E +++
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKE 822
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 57/344 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L +++ MQ+LG ++ + L++ G A + E+K L+ DV Y+
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK----SNSLEPDVVLYNV 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ F A MA K +M + G+ + +T++S+I A + +A+ LFE M Q
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P + N ++ A +F+ A+ L
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLER------------------------------ 365
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+R P+ +YN ++ +AL EM+ + P
Sbjct: 366 -----------------QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-P 407
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++ I+ID +G +E AL + M++ G+ P+V+ + +++RL A S+F
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
E + H +P+ VTY +L+ R+G + E + +Y+ M A
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK---LYEQMLDA 508
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 193/474 (40%), Gaps = 65/474 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ N + RD L + ++ + N+++ T+I V G + ++ ++++
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY----NILLKA---- 333
S ++ ++ ++N ++ A + + + M+ G++ D +Y +L KA
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322
Query: 334 ----------------CCLAGNTVLA--------QEIYGEVKHLEAKGVLKLDVFTYSTI 369
C A NT++ ++ Y ++ KG + V +Y+ I
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP-SVVSYNCI 381
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ALK E+M + PN T++ +I+ AG +E A+ + + M AG
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISN 481
PN NI++ +A + D A +F R ++ + G G D
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 482 MEHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT------------ 527
+ + D I N V S +F K + YN +++ C+
Sbjct: 501 LYEQMLDANQIPNA--VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558
Query: 528 -----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ + +AL E++ +G P+ S+TILI +G A ++ M+E G D
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
AY T I +S ++ +A+ L EEMK +P +VTY +++ ++ L E
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A ++ +K N+ I ++ID G G ++ I E+L + +T N+Y +N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ V A ++ L +++M+ L + +Y+IL+ C A + E++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ--- 786
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
K K +VFTY+T++ A A A + E G ++ ++++I +NA
Sbjct: 787 -KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQA-----CVEAC--------QFDRAFRLFRSWT 460
A LFEE GC ++ C +LL + C+E + +A RSWT
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
++ F+P + Y L+ A T D + L +M+ +G + N +T LI G V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L M+ + + PDVV Y I ++ ++ A+ F EMK + + VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 625 LRARSRYGSLHE 636
+ + L+E
Sbjct: 312 IGVLCKADRLNE 323
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ MR + P ++T LI A S + + L + + M+E G + +V +TT I+V
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTY 621
R R+ A SL +EMK ++P++V Y
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLY 273
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 170/423 (40%), Gaps = 78/423 (18%)
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V + VFN L+NV LK VY M G+ D+ + N L+KA C A A
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ ++ + + GV D T++T+++ F + + AL+VK M+ AG +P +T + L
Sbjct: 218 LM---LEEMSSHGVAP-DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
IN G VE A+ ++ + G EP+ N + + A ++
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM------DL 327
Query: 465 QVALGEDYD--------------GNTDRISNMEHK--DKQSITNTPNF----VPNSHYSS 504
+ G D D G D + ++ D+ + +T F V S +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 505 FDKRF---------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
++ P T+NIL+ A C D + L EM++ G +P+ +++ I
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 554 LID---ACGGSGN--------------------------------VEGALQILKIMREDG 578
LID + G GN +E A ++ M G
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+S V + T I ++KR+ A L E+M +QPN +TY ++L + G++ +
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567
Query: 639 QCL 641
L
Sbjct: 568 DIL 570
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 30/353 (8%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N+++N + +L + M G + D ++N L+ A L+ L +E
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA--LSSQNRL-EEAL 392
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ L KG L DV+T++ ++ + +++ E+M S+G TP+ +T++ LI+
Sbjct: 393 DLARELTVKG-LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
+ G + A+ L EM GC ++ N ++ A + + + A +F + +S++
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI + +Q + + +P TYN ++
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMV-----------------KEGLQPNNITYNSIL 554
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C KA ++ M G + +++ LI+ +G + AL++L+ MR G+
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
P AY I+ R L+ A +LF EM P+ +TY + R+ R G
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG 667
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 167/408 (40%), Gaps = 38/408 (9%)
Query: 233 KKRDLVSALRAYDAS-KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D +ALR +++ + +P+ + I+ G G + + ++R + +
Sbjct: 65 EQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRA 124
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKL-----GVMADMASYNILLKACCLAGNTVLAQEI 346
V S + A +F V + +L GV AD +N LL L + +
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y E + +G+ + DV T +T++K A + A+ + E+M S GV P+ T+++L+
Sbjct: 185 YNE---MTGRGI-QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQ 240
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
G +E A+ + +M++AGC P N+L+ C+ R L Q
Sbjct: 241 GFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING---YCKMGRV-----EDALGYIQQ 292
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF------KPTTTTYNI 520
+ + ++ + + H N H S K P TYN
Sbjct: 293 EIADGFEPDQVTYNTFVH----------GLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 342
Query: 521 LMKACCT---DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C + + K ++N+M G P+ ++ LI A +E AL + + +
Sbjct: 343 VIN-CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G+SPDV + I + LFEEMK P+ VTY L+
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 160/385 (41%), Gaps = 42/385 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I + VT N +V + N H + L+V M + G D+ +YN ++ CL+
Sbjct: 294 IADGFEPDQVTYNTFVHG--LCQNGH-VSHALKVMDLMLQEGHDPDVFTYNTVIN--CLS 348
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N L E G V + +G L D T++T++ + + AL + ++ G++P+
Sbjct: 349 KNGEL-DEAKGIVNQMVDRGCLP-DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
T++ LINA G + LFEEM +GC P+ NIL+ + A L
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 457 --RSWTLSKTQVALGEDYDG--NTDRISNME----HKDKQSITNTPNFVPNSHYSSFDKR 508
S ++ V D RI E D Q I+ +
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS--------------- 511
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
T+N L+ C A L+ +M GL PN+I++ ++ GN++
Sbjct: 512 ------AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A IL+ M +G DVV Y T I ++ R + A L M+ I+P Y +++
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R +L + L ++++M + G
Sbjct: 626 SLFRRNNLRD---ALNLFREMTEVG 647
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 27/300 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
++ D ++ ++ V + ++ V +M G+ P+ +T ++LI A A V A+
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDG- 474
+ EEM G P+ L+Q +E + A R+ S T V + +G
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277
Query: 475 -NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
R+ + +Q I + F+P TYN + C + +
Sbjct: 278 CKMGRVEDALGYIQQEIAD-----------------GFEPDQVTYNTFVHGLCQNGHVSH 320
Query: 534 AL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL M+ M G P+ ++ +I+ +G ++ A I+ M + G PD + T I
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL++A L E+ + P++ T+ L+ A + G H + ++++M +G
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH---LGIRLFEEMKSSG 437
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 135/339 (39%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD ++E+++S T + +N L++ + L L+
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G +YN ++ A C A+E++ + ++A+G+ + V T++T++
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ---MDAQGISRSAV-TFNTLI 519
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
AK A ++ E M+ G+ PN IT++S++ G +++A + E M G E
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R +
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIK---------------------------- 611
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + L EM VG P+
Sbjct: 612 -------------------GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ + C G G ++ A L M G P+ ++
Sbjct: 653 LTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 691
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 509 FSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F + T +N L+ + ++++ NEM G+ P+ ++ LI A + V
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ +L+ M G++PD +TT ++ + ++ A + +M P VT L+
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275
Query: 627 ARSRYGSLHE----VQQCLA 642
+ G + + +QQ +A
Sbjct: 276 GYCKMGRVEDALGYIQQEIA 295
>gi|168052832|ref|XP_001778843.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669712|gb|EDQ56293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 953
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 327 YNILLKACCLAGNTVLAQEIYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+NIL+ CC G + E V++LE L F+++ ++ F A +
Sbjct: 465 FNILIDFCCKQGKISQGLDFLDEMQVRNLE------LSSFSFNPFIREFGRWTMIDEAFE 518
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+K ML GV P +T++SLI+AC G +E+A LF EM + G E N+ C N L+Q
Sbjct: 519 MKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFA 578
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
+FDRA + RS +
Sbjct: 579 MQGRFDRALAVMRSMDAA------------------------------------------ 596
Query: 505 FDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP TY +L+ AC D + L EM+ + P+ +T++I G
Sbjct: 597 -----GVKPDVNTYRLLIFACSLSKDQDKADQLFAEMQEREIRPDESIYTVMIIVYSKCG 651
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV+ +++++ + + G + + A + + + RL++A +L+ K ++ P+
Sbjct: 652 NVDRGIEMIRSLEKSGETAGIEAKSAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVG 711
Query: 623 TLLRARSRYGSLHEV 637
TLL A + G L ++
Sbjct: 712 TLLAALGKVGDLDKM 726
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 170/408 (41%), Gaps = 37/408 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F F+REFG+ + A A + P + ++I C GD ++ +++ +++
Sbjct: 500 FNPFIREFGRWTMIDEAFEMKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMK 559
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V N + +N L+ A +F L V ++M GV D+ +Y +L+ AC L+ +
Sbjct: 560 ELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGVKPDVNTYRLLIFACSLSKDQD 619
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E++ E ++ D Y+ ++ V++ +++ + +G T
Sbjct: 620 KADQLFAEMQERE----IRPDESIYTVMIIVYSKCGNVDRGIEMIRSLEKSGETAGIEAK 675
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
S++++ A G +E+A+ L+ + P+S LL A + D+ F LF
Sbjct: 676 SAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVGTLLAALGKVGDLDKMFELFED--- 732
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS----------------- 504
A G+ + EH + + I + + ++
Sbjct: 733 -----ARGDGKWPFMNLRQRAEHLNIRCINSVLACIRHNQLGRAISFLRKVKEEGIADEG 787
Query: 505 --FDKRFSFKPTTTTYNILMKAC-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
FDK F T M+ D + V +N MR +GL P+ +S L+D C
Sbjct: 788 VLFDKIFLHISTGGQDENEMRWLDVNDGFLV---INAMRELGLRPSRMSLEALLDGCAAL 844
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ + A ++L+ M +G+ ++ + + V + ++A L +M
Sbjct: 845 NDSQQAHRVLQEMEREGLQLNIFSMIRVFRAYVAGEDEEKALDLLNQM 892
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 518 YNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+NIL+ CC + L ++EM+ L + S+ I G ++ A ++ M
Sbjct: 465 FNILIDFCCKQGKISQGLDFLDEMQVRNLELSSFSFNPFIREFGRWTMIDEAFEMKAAML 524
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ P VV Y + I CV+ L++A SLF EMK ++ N Y L++ + G
Sbjct: 525 RLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRF- 583
Query: 636 EVQQCLAVYQDMWKAG 651
+ LAV + M AG
Sbjct: 584 --DRALAVMRSMDAAG 597
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 49/251 (19%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ +++ I ++++A + ML+ G +P N L+ ACV+ +RA LF
Sbjct: 496 SSFSFNPFIREFGRWTMIDEAFEMKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLF 555
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
P K + T
Sbjct: 556 -------------------------------------PEM----------KELGVEANTH 568
Query: 517 TYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN L++ + R A+M M G+ P+ ++ +LI AC S + + A Q+ M
Sbjct: 569 CYNPLIQGFAMQGRFDRALAVMRSMDAAGVKPDVNTYRLLIFACSLSKDQDKADQLFAEM 628
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+E + PD YT I V + + + + ++ + +L + G L
Sbjct: 629 QEREIRPDESIYTVMIIVYSKCGNVDRGIEMIRSLEKSGETAGIEAKSAILHGLAVTGRL 688
Query: 635 HEVQQCLAVYQ 645
E AV++
Sbjct: 689 EEALALYAVFK 699
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
FSF P + + + +KA M + G+ P +++ LI AC G++E A
Sbjct: 498 FSFNPFIREFG--RWTMIDEAFEMKAAMLRL---GVQPTVVTYNSLISACVKIGDLERAC 552
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ M+E G+ + Y I+ R +A ++ M ++P++ TY L+ A
Sbjct: 553 SLFPEMKELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGVKPDVNTYRLLIFAC 612
Query: 629 SRYGSLHEVQQCLAVYQD 646
S + Q A Q+
Sbjct: 613 SLSKDQDKADQLFAEMQE 630
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 174/402 (43%), Gaps = 56/402 (13%)
Query: 283 RSQNVTLNIYVFN----SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
R + +++ +N +L NA L + E ++ MQ+ G D +Y+I+L+ C AG
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAY--EKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPN 397
A+E+ G+++ GV KL+V TYS ++ A AL++ + M S G P+
Sbjct: 88 ELDKAKELLGQLRE---SGV-KLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF- 456
+T++SL+ + + +A LFE M +AGCEPN + LL +A + D A RL+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 457 ----------------------------RSWTLSKTQVALGEDYD--------GNTDRIS 480
+ + V G D G +
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 481 NMEHKDKQSITN-TPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC-----TDYYRV 532
+ E Q I + + + + +F++ S P+ +N L+ A C D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
M M+ PN ++ I++D + ++ A +++ M G+SPDVV Y+ +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +L +A L EEM + P+ T ++L A S+ G +
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 21/392 (5%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VM 321
G+C G+ K++ + LR V LN+ ++ +++ A + LE++K M G +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ ++N LLK C +G + E + +++ AK + +V +YST++ A
Sbjct: 142 PDVVTFNSLLKGLC-SGERM--SEAFVLFEYM-AKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL- 440
A ++ E+M+ P+ + ++S + A V +A +M+ G + ++ + ++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 441 ----QACVEACQFDRAFRLFRSWTLSKT----QVALGEDYDGNTDRISNMEHKDKQSITN 492
+ E Q L RS L + + + ++ + + + + H +S
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS-KR 316
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
P+ V K F P TYNI++ C + L+NEM GLSP+ ++
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ L+D G ++ A +L+ M ++G+ PD + + ++ ++ A S E MK
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P+LVTY TLL + G + E LA
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 164/399 (41%), Gaps = 56/399 (14%)
Query: 267 GICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C S A ++E + N+ +++L++ A L +++ M + +
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-----ADAK 377
D+ +Y + C A A + + + KG K D +ST++ + A+
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDC---CRKMVTKGS-KADAVAFSTVIGILCKKGHAEEA 268
Query: 378 WWQM------------ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
QM A K E+M+S P+ +++LI+A + + + LF+ M
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 426 QAG---CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG----- 474
C PN + NI++ +A Q D A L ++ LS V DG
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388
Query: 475 NTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
DR ++ E K+ + P+S + + N L KA DY
Sbjct: 389 KLDRACDLLEEMSKEGV------FPDSFTDA-----------SILNALSKAGKVDY--AL 429
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + M+ G +P+ +++ L+D +G ++ A+ L M +PDV +YT I
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
RS + A ++F+EM + P+ V Y +LL +R G
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG 528
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFT 308
SP++ ++D G+C G ++ + E++ + V + + S++N A + +
Sbjct: 371 SPDVVTYSALVD--GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + M+ G D+ +YN LL C AG + + I K + AK DVF+Y+
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGR--IDEAITFLAKMVAAK--CTPDVFSYTI 484
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + A + ++M+ GV P+T+ + SL++ A GL + A+ L + L
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL--- 541
Query: 429 CEPN 432
C+P+
Sbjct: 542 CKPD 545
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
K+ PN+ ++D +++ + ++ + ++ ++ +++L++ L
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE---AKGVLKLD 362
++ + M K GV D + +L A AG A + HLE A+G D
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA------LSHLETMKARGSTP-D 443
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ TY+T++ A A+ M++A TP+ +++ +I A +G A +F+
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
EM++ G P++ + LL D A L ++
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 84/353 (23%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI------------------------ 346
V + M +LG + ++ SYNILLK C + A E+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 347 ----------YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
YG + +G+L +V TYS+I+ A+ A++V M+ GV P
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILP-NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T++S+++ ++G ++A+ ++M G EP+ N L+ + + A ++F
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S T KR KP T
Sbjct: 328 DSMT----------------------------------------------KR-GLKPEIT 340
Query: 517 TYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L++ T V+ L++ M G+ PNH ++ILI A G V+ A+ + M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R+ G++PD V Y T I + +S R++ A FE+M ++ P + Y +L+ +
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
GD K+ Y ++ + + N+ ++S++ A + +EV +M K GVM + +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ C +G +E G +K + + GV + DV TY++++ A K+ +
Sbjct: 273 NSIVHGYCSSGQ---PKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G+ P T+ +L+ A G + + L + M++ G PN +IL+ A +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 448 QFDRAFRLF---RSWTLSKTQVALG 469
+ D+A +F R L+ V G
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYG 413
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 6/241 (2%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + + + F K+ DL A Y PN+ +II K+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ + V N +NS+++ ++ K + K M GV D+ +YN L+ C
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A++++ + K LK ++ TY T+++ +A + + M+ G+
Sbjct: 316 KNGRCTEARKMFDSM----TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +S LI A A G V+QAM +F +M Q G P++ ++ ++ + + A R
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 456 F 456
F
Sbjct: 432 F 432
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC-GICGDYMK 274
I+P + + + + K + + A+ + K+ PN CRT + G C
Sbjct: 230 ILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN---CRTYNSIVHGYCSSGQP 285
Query: 275 SRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNIL 330
AI + + S V ++ +NSLM+ + + T +++ +M K G+ ++ +Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L+ G V E++G + + G+ + + +S ++ +A A+ V M
Sbjct: 346 LQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+T+ ++I +G VE AM FE+M+ P + N L+ + C FD
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS---LCIFD 458
Query: 451 R 451
+
Sbjct: 459 K 459
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 445
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR----------------------------DMQNA---- 533
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 534 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 639 GLRPSLQTYTLLL 651
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 32/335 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A ++ + A G D T + I N
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMY------QRMQAGGLSPDTFTYSV----------IINC- 478
Query: 495 NFVPNSHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSP 546
H + K F P TYNI+M A +Y L +M+ G P
Sbjct: 479 -LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++I+++ G G +E A + M++ PD Y + + ++ +++A+ +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ M H ++PN+ T +LL R + E + L
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++ + +A L + ML G P+ Q +LL C + + D F
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T TYN L+ + Y +A+ N+M+ G P+ +++ LID +G ++ A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 516 KAR-----NYQNALKLYRDMQNAG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 56/252 (22%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF--- 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY- 518
++ Q A KP TY
Sbjct: 423 --NQMQEA------------------------------------------GCKPDRVTYC 438
Query: 519 ---NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M
Sbjct: 439 TLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 636 EVQQCLAVYQDM 647
E + AV+ +M
Sbjct: 557 EAE---AVFTEM 565
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M G
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRMQAGG 464
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + YG + + + + V+ M +AG
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAG 429
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 58/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDEA--------------------------------------GLKPDV 530
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ E L + +M + G
Sbjct: 651 MKEA---LYFHSEMIEKG 665
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 44/331 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SK L +A SL +EM I+P +VTY L+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 139/350 (39%), Gaps = 59/350 (16%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G C G ++ ++ + + VT N+ + +L + D+ E+ M G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C AGN L Q + + EA LK DV+TY+TI+ +K A
Sbjct: 494 NIFTYNSLINGLCKAGN--LEQAMRTMIDMDEAG--LKPDVYTYTTIIGALCQSKELDRA 549
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-Q 441
+ ++ML G+ P +T++ L+N +G VE L E ML+ PN+ N L+ Q
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C+E K + E Y G + VPN +
Sbjct: 610 YCIE-----------------KNMKSTTEIYKGMLSQ----------------EVVPNEN 636
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACG 559
TYNIL+K C +AL +EM G S+ LI
Sbjct: 637 ---------------TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A ++ + MR++ ++ + Y I + L+ +L +E+
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
FD+ S P TY I++ CT + L++EM GL N +++T +I G
Sbjct: 276 FDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEG 334
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V A+++++ M G+ D +TT + R L A + F+EM+ + + VTY
Sbjct: 335 QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYT 394
Query: 623 TLLRARSRYGSLHEVQQCLAVYQD 646
L+ R G L E ++ L +D
Sbjct: 395 ALINGLCRAGELKEAERVLQEMED 418
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 58/385 (15%)
Query: 248 KKHLSSPNMYICRTII-DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
KK+ ++Y T+I +CG G+ + +Y+++ V+ ++ V+N+++N + A
Sbjct: 257 KKNERGQDLYTYSTLIHGLCG-SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
++ LE++K M+K G + SYNIL++ L N + + I + L + D
Sbjct: 316 IEECLELWKVMEKEGCRT-VVSYNILIRG--LFENAKVDEAI--SIWELLPEKDCCADSM 370
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY +V + AL + E+ + +T +SS+IN G +++ + ++M
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC+PN CN ++ V A + + A R F NM
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFF-----------------------GNMVS 467
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTV 542
K F PT TYN L+ + AL+ EM
Sbjct: 468 K-----------------GCF-------PTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PN I++++L++ ++ AL + E G PDV + I S +++ A
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
L+ EMK PNLVT+ TL+
Sbjct: 564 LQLYSEMKQRNCVPNLVTHNTLMEG 588
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 178/400 (44%), Gaps = 33/400 (8%)
Query: 242 RAYDASKKHLS-------SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+ +D +K+ L+ SP+++ T+I+ G + +++++ + VT ++ +
Sbjct: 138 KQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 197
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
N L++ D+ E+++ + K V ++ SYN+++ C G + EI+ +K
Sbjct: 198 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 257
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
E D++TYST++ + A +V ++M GV+P+ + +++++N A
Sbjct: 258 KNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 313
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G +E+ + L++ M + GC NIL++ E + D A + W L + D
Sbjct: 314 GRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI---WELLPEK-----D 364
Query: 472 YDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
++ + H + + + + D T Y+ ++ C +
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL------DTFAYSSMINGLCREG 418
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
V ++++M G PN +I+ + +E AL+ M G P VV Y
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 478
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
T I +++R +A++L +EM +PN++TY L+
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 54/323 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L++++ M ++ G + SYN LL A + A+ + + E G L ++ TY
Sbjct: 72 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF---LYFETMG-LSPNLQTY 127
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ K + A ++ M G +P+ ++ +LIN+ A G + A+ LF+EM +
Sbjct: 128 NILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 187
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P+ C NIL+ D F+
Sbjct: 188 RGVTPDVACYNILI---------DGFFK-------------------------------- 206
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
K I N + K S P +YN+++ C + + + M+
Sbjct: 207 KGDILNASEI-----WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 261
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI GSGN++GA ++ K M E+G+SPDVV Y T + +R+ R+++
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L++ M+ + +V+Y L+R
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRG 343
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 155/358 (43%), Gaps = 34/358 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ N+L+ N D + +Y + +G+ ++ +YNIL+K C A+E+ +
Sbjct: 95 LLNALIESNKWDEAESFFLY--FETMGLSPNLQTYNILIKISCRKKQFDKAKEL---LNW 149
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ +G DVF+Y T++ A + ALK+ ++M GVTP+ ++ LI+ G
Sbjct: 150 MWGQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 208
Query: 413 LVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLF-------RSWTL-SK 463
+ A ++E +L+ PN N+++ + +FD +F ++ R L +
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 268
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ + G GN D + + + ++ + V N+ + + + + + ++ K
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 328
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C RTV +S+ ILI + V+ A+ I +++ E D
Sbjct: 329 EGC-------------RTV------VSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 369
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ Y + ++ L +A S+ EE ++ + + Y +++ R G L EV L
Sbjct: 370 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 175/451 (38%), Gaps = 91/451 (20%)
Query: 127 GRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE--- 183
G +D V K++ E GV+P D + + N R +G +E + L +V+E+
Sbjct: 279 GNLDGATRVYKEMAENGVSP----DVVVYNTMLNGYLR---AGRIEECLELWKVMEKEGC 331
Query: 184 -----FRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRAD-----ILFCNFVREFGK 233
+ + ++ L E + V+ AI ++P D + + V K
Sbjct: 332 RTVVSYNILIRGLFENAK----------VDEAISIWELLPEKDCCADSMTYGVLVHGLCK 381
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNI 291
L AL + ++ + + ++I+ G+C G + + + + N
Sbjct: 382 NGYLNKALSILEEAENGRGDLDTFAYSSMIN--GLCREGRLDEVAGVLDQMTKHGCKPNP 439
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
YV N+++N V A L+ L + NM G + +YN L+ A E Y
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF---SEAYAL 496
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
VK + KG K ++ TYS ++ K MAL + L G P+ + +I+
Sbjct: 497 VKEMLQKG-WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 555
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
++G VE A+ L+ EM Q C PN N L++ + F+RA +++
Sbjct: 556 SSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIW------------- 602
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
D I ++ +P +YNI +K C+
Sbjct: 603 -------DHI---------------------------LQYGLQPDIISYNITLKGLCS-C 627
Query: 530 YRVK---ALMNEMRTVGLSPNHISWTILIDA 557
+R+ +N+ G+ P I+W IL+
Sbjct: 628 HRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 40/273 (14%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P +++SL+NA + ++A F G PN Q NIL++ QFD+A
Sbjct: 84 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS-----FDK 507
L +W G+ + D S N + + Y S FD+
Sbjct: 144 KELL-NWMW-------GQGFS-----------PDVFSYGTLINSLAKNGYMSDALKLFDE 184
Query: 508 --RFSFKPTTTTYNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDAC 558
P YNIL+ +++ ++N ++ + PN S+ ++I+
Sbjct: 185 MPERGVTPDVACYNILIDG----FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + + +I M+++ D+ Y+T I S L A +++EM + P++
Sbjct: 241 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
V Y T+L R G +++CL +++ M K G
Sbjct: 301 VVYNTMLNGYLRAG---RIEECLELWKVMEKEG 330
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 495 NFVPNSHYSSFDKR---FSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHI 549
N +P+ F + F +P +YN L+ A + ++ T+GLSPN
Sbjct: 66 NSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQ 125
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ILI + A ++L M G SPDV +Y T I ++ + A LF+EM
Sbjct: 126 TYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 185
Query: 610 KHYQIQPNLVTYITLLRARSRYGSL 634
+ P++ Y L+ + G +
Sbjct: 186 PERGVTPDVACYNILIDGFFKKGDI 210
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 28/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 241 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 295
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 296 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 355
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
N L++ + + ++F+ K + L Y + +E K +
Sbjct: 356 NANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE-KGR 414
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ + + F P +Y+IL+ + + M+ G +
Sbjct: 415 MIFEDI-------------RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++D SG V A +IL+ M+E + P V Y + + RL +A+ L
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FEE K I+ N+V Y +L+ +G + + + + ++M K G
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDG---FGKVGRIDEAYLILEEMMKKG 564
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 182/441 (41%), Gaps = 32/441 (7%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF VR ++ + AL D K P++ + ID G G+ + + +L
Sbjct: 82 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++Q + + + S++ V A L E++ M+ + +YN ++ AG
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ Y ++ L +G + V ++++I+ + AL + E ++ PN+ T
Sbjct: 202 ---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSST 256
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ G VE+A + +EM A PN NI++ +A + + A+++F S +
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316
Query: 461 --------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF------- 505
++ + G G D + K + N V S +F
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376
Query: 506 DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILI 555
D F KP T N M + + + + ++R+ G P+ S++ILI
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+G I M++ G + D AY + +S ++ +A+ + EEMK +Q
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496
Query: 616 PNLVTYITLLRARSRYGSLHE 636
P + TY ++ ++ L E
Sbjct: 497 PTVATYGAIVDGLAKIDRLDE 517
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 53/338 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
LE+ + MQ++G + + L++A G A + EVK L+ D+ Y+
Sbjct: 64 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK----GSCLEPDIVLYN 119
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ F A MA K ++ + G+ P+ ++++S+I AG + +A LF +M
Sbjct: 120 VCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
P + N ++ A +F+ A++L +R+ +++
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLL--------------------ERL-----RER 214
Query: 488 QSITNTPNFVPNSHYSSFDKRFSF--------------KPTTTTYNILMKACC-----TD 528
I + +F NS + K+ +P ++TYNI++ C +
Sbjct: 215 GCIPSVVSF--NSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 272
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
YR+ ++EM L PN ++ I++D + +E A +I + + G +PD V Y +
Sbjct: 273 AYRI---LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
I + ++ +A+ LFE+M N V Y +L+R
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 41/269 (15%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+++ + +R F G+K D + + + P++ + T +D G+ K R I
Sbjct: 360 VVYTSLIRNFFIHGRKED---GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+ED+RS ++ ++ L++ A + T ++ M++ G D +YN ++ C
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 476
Query: 337 AGNTVLAQEIYGEVKH--------------------------------LEAKGVLKLDVF 364
+G A EI E+K ++KG+ +L+V
Sbjct: 477 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI-ELNVV 535
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
YS+++ F A + E+M+ G+TPN TW+SL++A A + +A+ F+ M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ C PN+ +IL+ ++++AF
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAF 624
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 171/430 (39%), Gaps = 60/430 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ +C+ + GKK + A R ++ H ++P +Y ++I I G ++
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT--SLIRNFFIHGRKEDGHKVF 382
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L + ++ + N+ M+ A +++ ++++++ G + D+ SY+IL+ A
Sbjct: 383 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 442
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I+ H + LD Y+ +V F + A ++ E+M V P
Sbjct: 443 GQARETSNIF----HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 498
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+ ++++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 499 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI-- 556
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+E K+ +T P T
Sbjct: 557 ------------------------LEEMMKKGLT---------------------PNVYT 571
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+ A +AL+ M+ + PN +++ILI+ A + M+
Sbjct: 572 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 631
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV YTT I + + A+SLFE K P+ ++ L+ S
Sbjct: 632 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 691
Query: 636 EVQQCLAVYQ 645
E Q VYQ
Sbjct: 692 EAYQT-TVYQ 700
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 50/279 (17%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+ ++ A+A+ + AL++ M G +++L+ A A G V A+ L +E+
Sbjct: 47 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ EP+ +L C++ F +A GN D H
Sbjct: 107 KGSCLEPDI----VLYNVCIDC--FGKA---------------------GNVDMACKFFH 139
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ K KP +Y ++ C + L +M
Sbjct: 140 ELKAQ--------------------GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
P ++ +I G +G E A ++L+ +RE G P VV++ + + + +++ +A
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 239
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
SLFE MK +PN TY ++ G + E + L
Sbjct: 240 LSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+R F+P + Y +L+ A R L+ +M+ VG +T L+ A G V
Sbjct: 37 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 96
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL ++ ++ + PD+V Y I ++ + A F E+K ++P+ V+Y ++
Sbjct: 97 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSM 156
Query: 625 LRARSRYGSLHEVQQCLA 642
+ + G L E ++ A
Sbjct: 157 IWVLCKAGRLGEAEELFA 174
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
MR + P ++T+LI A + E AL++L+ M+E G V +TT ++ R +
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 599 LKQAFSLFEEMKHYQIQPNLVTY 621
+ A +L +E+K ++P++V Y
Sbjct: 96 VADALALVDEVKGSCLEPDIVLY 118
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+E++ GL P+ +S+T +I +G + A ++ M + P AY T I
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 196
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ R + A+ L E ++ P++V++ ++L G +V + L++++ M K
Sbjct: 197 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTC---LGKKRKVDEALSLFEVMKK 248
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L +
Sbjct: 278 MVDRAFEMVRNLELKGCE------------------------------------------ 295
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 296 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + Q L ++ + + G
Sbjct: 411 ATLCKNG---KADQALEIFGKLGEVG 433
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 187/473 (39%), Gaps = 99/473 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 179
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V N L++ N T
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ V++LE KG +
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGC-E 295
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 398
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 399 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +AF L +M+ + P++VTY +L + H ++ + V + M G
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAINVLESMVGNG 538
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+C + +E ++HL E M++ G P+ C L++ +A R+ L K
Sbjct: 99 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQ 155
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKA 524
Y+ + M D + D+ S F P T TYNI++ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDAT-------------RVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C+ AL +N++ + P I++TILI+A G V+ AL+++ M G+ PD
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ Y T I+ + + +AF + ++ +P++++Y LLRA G E ++ +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ + ++G + +SYN + A +G+ + A + + + + G+ D TY++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM---ILEMMSNGI-DPDEITYNS 478
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A ++ DM S P+ +T++ ++ A +E A+++ E M+ G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 429 CEPNSQCCNILLQA 442
C PN +L++
Sbjct: 539 CRPNETTYTVLIEG 552
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L LE+ N G+ D +YN ++ C G A E+ +++ E V
Sbjct: 458 LHMILEMMSN----GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE----FHPSVV 509
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ F A + A+ V E M+ G PN T++ LI AG +AM L ++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 425 LQ 426
++
Sbjct: 570 VR 571
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 445
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR----------------------------DMQNA---- 533
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 534 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 639 GLRPSLQTYTLLL 651
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 32/335 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A ++ + A G D T + I N
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMY------QRMQAGGLSPDTFTYSV----------IINC- 478
Query: 495 NFVPNSHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSP 546
H + K F P TYNI+M A +Y L +M+ G P
Sbjct: 479 -LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++I+++ G G +E A + M++ PD Y + + ++ +++A+ +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ M H ++PN+ T +LL R + E + L
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++ + +A L + ML G P+ Q +LL C + + D F
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T TYN L+ + Y +A+ N+M+ G P+ +++ LID +G ++ A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 516 KAR-----NYQNALKLYRDMQNAG 534
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 56/252 (22%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF--- 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY- 518
++ Q A KP TY
Sbjct: 423 --NQMQEA------------------------------------------GCKPDRVTYC 438
Query: 519 ---NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M
Sbjct: 439 TLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 636 EVQQCLAVYQDM 647
E + AV+ +M
Sbjct: 557 EAE---AVFTEM 565
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M G
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRMQAGG 464
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + YG + + + + V+ M +AG
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAG 429
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + ++Q +GV D+ + N+L+ C + LA G++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+ T+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 135 KLG----FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V A+ LF++M G P+ L+ + ++ A L R T K
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK-------- 242
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A + +
Sbjct: 243 ---------------------------------------IKPDVITFNALIDAFVKEGKF 263
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L NEM + ++PN ++T LI+ G V+ A Q+ +M G PDVVAYT+
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
I + K++ A +F EM + N +TY TL++ + G + Q+ +
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 22/343 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H + + L ++ M+ G+ D+ Y L+ C +G A + + K +K
Sbjct: 190 NGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIK 244
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV T++ ++ F + A ++ +M+ + PN T++SLIN G V++A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F M GC P+ L+ + + D A ++F + +S+ + GNT +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF--YEMSQKGLT------GNTITYT 356
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---- 536
+ Q PN V +S R P TYN+L+ C + KALM
Sbjct: 357 TLIQGFGQ--VGKPN-VAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ G++PN ++ +L+ +G +E AL + + MR+ M ++ YT I+ +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++K A +LF + ++PN+VTY T++ R G HE
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + AL +D + + P++ + ++++ G+C G + + ++
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADSLL 235
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + KF E+Y M ++ + ++ +Y L+ C+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K A+K+ +M G+T N
Sbjct: 296 GCVDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + +A +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+M+ ++ + P T
Sbjct: 412 -----------------------DMQKREMDGVA---------------------PNIWT 427
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +MR + I++TI+I +G V+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R +A LF +MK
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 42/385 (10%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L M KLG D+ ++ L+ CL
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL- 154
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + + M + G+ P+
Sbjct: 155 GNRM--EEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M + +P+ N L+ A V+ +F A L+
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ T + G +G D M + + +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM-------------------FYLMETKG 312
Query: 510 SFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P Y L+ C C + EM GL+ N I++T LI G G A
Sbjct: 313 CF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITL 624
++ M G+ P++ Y + + ++K+A +FE+M+ + + PN+ TY L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWK 649
L G L ++ L V++DM K
Sbjct: 432 LHGLCYNGKL---EKALMVFEDMRK 453
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y I++ + + AL + M+ + P+ I ++ L+N A + ++L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--ME 483
G + CN+L+ CQ + + L S+ ++ D T I+ +
Sbjct: 100 IMGVSHDLYTCNLLMNC---FCQSSQPY-LASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++++ V KP Y ++ + C + + AL ++M
Sbjct: 156 NRMEEAMSMVNQMV----------EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + +T L++ SG A +L+ M + + PDV+ + I V+ +
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
A L+ EM I PN+ TY +L+ G + E +Q
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G G ++ ++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ +K L ++++MQK GV ++ +YN+LL C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ +++ E + + K A + A+ + + S GV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK----AGKVKNAVNLFCSLPSKGVK 492
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL +A LF +M + G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/462 (19%), Positives = 186/462 (40%), Gaps = 90/462 (19%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K + AL + + +P++ I+D G ++ ++
Sbjct: 11 VTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHK 70
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N +N+L+N D ++ ++ + M G D +YN +L C G
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 340 TVLAQE-----------------------IYGEVKHLEAKGVLKL----------DVFTY 366
A++ +Y E K EA G+ K D+ TY
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T++ F + A+K+ +D+++ G P+T+T++S++ A +++A +F++M+
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
+GC PN +I+L R L+ T
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT-------------------------- 284
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRT 541
+KRFS P N ++ C D ++V + EM
Sbjct: 285 -------------------EKRFS--PDVLLCNAVIDMLCKAKKVDDAHKV---LEEMSK 320
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+G P+ +++ IL+D + V+ A ++ M ++G +PD+V+Y+ + ++ ++
Sbjct: 321 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 380
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
A LF+ M ++ P++VT+ L+ + G L E + L V
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 160/391 (40%), Gaps = 32/391 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFT 308
+P++ T+ID G C A +++D+ ++ + +NS++ A ++
Sbjct: 184 APDLITYNTLID--GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E++K M G + A+Y+I+L C GN E+Y E+ DV +
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR----FSPDVLLCNA 297
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + AK A KV E+M G P+ +T++ L++ LV++A LF M+ G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHK 485
C P+ +++L + + A LF L V DG E K
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
D + + N +P+ T LM C D +A L M G
Sbjct: 418 DLLDVMSEHNVLPDG---------------VTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIM-REDG-MSPDVVAYTTAIKVCVRSKRLKQ 601
+ + I++ G + AL K M + DG SPDVV YTT + + + R+ Q
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A F++M P+ V Y TL+ + G
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 54/294 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV TYSTI+ AL++ E+M GV P+ T++ +++ AG V++A LF
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+M++ GC N+ N L+ + +RA++L +
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKL-----------------------LEE 105
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
M K ++P TYN ++ C K + M
Sbjct: 106 MASK------------------------GYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKVCVRSK 597
+ G SP+ +++ L+DA G V A + K M + ++PD++ Y T I R +
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A LF+++ P+ VTY ++L +R ++ E ++ +++ M +G
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE---MFKKMVDSG 252
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F+P TY+ ++ C +AL + EM G++P+ ++TI++D +G V+ A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M E G S + VAY I + + +++A+ L EEM +P+ +TY T+L
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 628 RSRYGSLHEVQQ 639
R G + E +Q
Sbjct: 125 LCRMGKVSEAKQ 136
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++ + + + ++ FN LM+ A L ++ M + V+ D + L+
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMH 440
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA-DAKWWQMALKVKEDMLS 391
C T A ++ +++ KG + DV ++ ++ + K Q L K + S
Sbjct: 441 GLCRDKRTDEAVRLF---QYMVEKGTVA-DVLPHNIVLAGLCREGKLAQALLFFKSMVKS 496
Query: 392 AG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G +P+ +T+++L+NA AG V+QA+ F++M +GC P+ N L+ + +
Sbjct: 497 DGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHI 556
Query: 451 RAFRLFRSW 459
+A RL ++
Sbjct: 557 QADRLTQAM 565
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P++ ++D G+C G +++ + + + NV + +LM+ D + +
Sbjct: 395 PDVVTFNILMD--GLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M + G +AD+ +NI+L C G LAQ + +++ G DV TY+T+
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGK--LAQALLFFKSMVKSDGEFSPDVVTYTTL 510
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
V +A A+ + M +G P+ + +++L+N G QA L + M + G
Sbjct: 511 VNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ ++++ +I +G V AL++++ M E G++PDV YT + R+ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +A LF +M N V Y L+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALING 89
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E G PDVV Y+T I ++ ++ +A + EEM + P++ TY ++ R G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 634 LHEVQQ 639
+ E +
Sbjct: 61 VDEADE 66
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 547 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 606
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 607 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 662
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 755
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 756 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 855
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 856 EMVENGITPDDSTYISLIEG 875
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 44/409 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S +Y ++S ++ ++ + L++ F L + +M +L + ++NI+L
Sbjct: 433 HATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIML 490
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG A E+ ++ A TY+T++ F Q AL + +M
Sbjct: 491 RHLCSAGKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ PN T+ ++I+ G V++A+ +F+EML G +P + N L+ + +
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNF 496
D A L+R + + Y DG + + M K T N
Sbjct: 603 DTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661
Query: 497 VPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ N H + + +R + T TY L+ A L +E
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EM IQP+LVTY TL+ S G +V+ L + +M G
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKG 826
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 164/386 (42%), Gaps = 28/386 (7%)
Query: 256 MYICRTIIDVC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
+ +C T ++ +C +RA+ +L Q N +N+++ + ++ L++
Sbjct: 479 LPLCTTTFNIMLRHLCSAGKPARAL--ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDI 536
Query: 312 YKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M ++ G+ + +Y ++ C G A +++ E + KG +K + Y+ ++
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE---MLTKGEVKPEAVMYNALI 593
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D AL ++ M+ GV T++ L++A G +A L EEM G
Sbjct: 594 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 653
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ + +A +F + + + + T I + K +
Sbjct: 654 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT----YTALIYALSKKGQVQE 709
Query: 491 TNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
T+ FD+ R +P YN L+ + T + R +M EM ++P
Sbjct: 710 TD----------KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ L+ G V+ A +++ M E G+ PD+V Y T I +K A +
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
EM + P L+TY L++ + G
Sbjct: 820 NEMMNKGFNPTLLTYNALIQGLCKNG 845
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 58/378 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ V L+ VF ++M+ DL + MQK G+ AD +Y L+ C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A+ + E +E KG L +D TY+ ++ + A V M+ VT
Sbjct: 402 RAGELKEAERVLQE---MEDKG-LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++L + G V A L EM G E N N L+ +A ++A R
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR- 516
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
T + + E KP
Sbjct: 517 --------TMIDMDEA--------------------------------------GLKPDV 530
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ A C + R +L+ EM G+ P +++ +L++ SG VEG ++L+
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M E + P+ Y + +K K +K +++ M ++ PN TY L++ + +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ E L + +M + G
Sbjct: 651 MKEA---LYFHSEMIEKG 665
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 44/331 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGE-----------------------------VKHLEAK 356
SYNILLKA C AG A +++ E + + A+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G L+L+ Y++++ + D A++V EDM+ GV + ++++++ G +
Sbjct: 315 G-LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + F+EM + G + L+ A + A R+ + ED +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----------EDKGLDV 423
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
D ++ D H KR + P TY L C D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANE 481
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++EM + GL N ++ LI+ +GN+E A++ + M E G+ PDV YTT I
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SK L +A SL +EM I+P +VTY L+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 139/350 (39%), Gaps = 59/350 (16%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G C G ++ ++ + + VT N+ + +L + D+ E+ M G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C AGN L Q + + EA LK DV+TY+TI+ +K A
Sbjct: 494 NIFTYNSLINGLCKAGN--LEQAMRTMIDMDEAG--LKPDVYTYTTIIGALCQSKELDRA 549
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-Q 441
+ ++ML G+ P +T++ L+N +G VE L E ML+ PN+ N L+ Q
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
C+E K + E Y G + VPN +
Sbjct: 610 YCIE-----------------KNMKSTTEIYKGMLSQ----------------EVVPNEN 636
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACG 559
TYNIL+K C +AL +EM G S+ LI
Sbjct: 637 ---------------TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A ++ + MR+D ++ + Y I + L+ +L +E+
Sbjct: 682 KKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ + D G+C GD + + ++ S+ + LNI+ +NSL+N A +L+
Sbjct: 457 TPNVVTYTALSD--GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ D+ +Y ++ A C + A + E+ KG+ K + TY+
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD---KGI-KPTIVTYNV 570
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ E ML + PNT T++SL+ ++ +++ ML
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
PN NIL++ +A A F S + K
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEAL-YFHSEMIEK 664
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
FD+ S P TY I++ CT + L++EM GL N +++T +I G
Sbjct: 276 FDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEG 334
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V A+++++ M G+ D +TT + R L A + F+EM+ + + VTY
Sbjct: 335 QVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYT 394
Query: 623 TLLRARSRYGSLHEVQQCLAVYQD 646
L+ R G L E ++ L +D
Sbjct: 395 ALINGLCRAGELKEAERVLQEMED 418
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y TII + ++ ++ +++ + + I +N LMN + ++ +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF----TYS 367
+ M + + + +YN L+K C+ N EIY KG+L +V TY+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY--------KGMLSQEVVPNENTYN 639
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++K A+ + AL +M+ G ++++LI +A LFE+M
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 160/376 (42%), Gaps = 58/376 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + +R + L+ Y +N+L++ K +V+ M+ G D + N LL
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLD-- 290
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ G E G +K +E +G V TY++++ + + A ++KE+M G+
Sbjct: 291 -VYGKARRYDEAIGVLKEME-QGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI 348
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ IT+++L++ AG ++ A+ + EML+ GC+PN N L++ +F
Sbjct: 349 EPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMI 408
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F D I + F P
Sbjct: 409 VF--------------------DEI---------------------------RSAGFVPD 421
Query: 515 TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+N L+ + V + EM+ G P ++ LI + G + A++I K
Sbjct: 422 VVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYK 481
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E G+ PD+ Y + R R +QA LF EM++ +P+ ++Y +LL A Y
Sbjct: 482 RMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHA---YA 538
Query: 633 SLHEVQQCLAVYQDMW 648
+ ++ + ++ +D++
Sbjct: 539 NAKKLDKMKSLSEDIY 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + + V++ M GV + +YN++L + V +E+ V + G+ L
Sbjct: 189 ASRFRDAVAVFRRMVANGVCPALVTYNVVLH--VYSKIAVPWKEVLALVDSMRKDGI-PL 245
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +TY+T++ ++ A KV ++M +AG P+ +T +SL++ A ++A+ +
Sbjct: 246 DRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVL 305
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM Q GC P+ N L+ + V+ + A +L + + D T +S
Sbjct: 306 KEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIE----PDVITYTTLVSG 361
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMK--ACCTDYYRVKALMN 537
++ K ++ ++++ R KP TYN L+K + + + +
Sbjct: 362 LDRAGKI----------DAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
E+R+ G P+ ++W L+ G +G + K M++ G P+ Y + I R
Sbjct: 412 EIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 471
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
QA +++ M I P++ TY +L A +R G + ++ A +++
Sbjct: 472 LFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENL 521
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 31/408 (7%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P++ T++ G + Y ++ N+ +N+L+ ++ KF + V
Sbjct: 350 PDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIV 409
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++ G + D+ ++N LL + G L E+ G K ++ G + + TY +++
Sbjct: 410 FDEIRSAGFVPDVVTWNTLL---AVFGQNGLDTEVSGVFKEMKKSGYVP-ERDTYVSLIS 465
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ + A+++ + M+ AG+ P+ T++++++A A G EQA LF EM P
Sbjct: 466 SYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRP 525
Query: 432 NSQCCNILLQACVEACQFDR---------AFRLFRSWTLSKTQVALGEDYDGNTD-RISN 481
+ + LL A A + D+ A R+ L KT V + + +D +
Sbjct: 526 DELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF 585
Query: 482 MEHKDKQ------------SITNTPNFVPN-SHYSSFDKRFSFKPTTTTYNILMK--ACC 526
+E + ++ SI V S K S +T TYN LM +
Sbjct: 586 LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL 645
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + + ++ E+++ P+ S+ +I A G G ++ A ++ M+ G+ PD+V Y
Sbjct: 646 GDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTY 705
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+K V + ++A L M + +PN TY T+L+ +G +
Sbjct: 706 NIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRI 753
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 517 TYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ +CC Y + +EMR G P+ ++ L+D G + + A+ +LK
Sbjct: 249 TYNTLI-SCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKE 307
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M + G P VV Y + I V+ L++A L EEM+ I+P+++TY TL+ R G
Sbjct: 308 MEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAG- 366
Query: 634 LHEVQQCLAVYQDMWKAG 651
++ + Y +M + G
Sbjct: 367 --KIDAAIGTYNEMLRNG 382
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 51/399 (12%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D+ +K + Y T+I C Y ++ +++++R+ + NSL++V
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKA 295
Query: 305 LKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
++ + V K M++ G + +YN L+ + G L +E + +E KG+ + D
Sbjct: 296 RRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDG---LLEEATQLKEEMEVKGI-EPD 351
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+T+V A A+ +ML G PN T+++LI G + M +F+
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
E+ AG P+ N LL G+ +G +S +
Sbjct: 412 EIRSAGFVPDVVTWNTLL-------------------------AVFGQ--NGLDTEVSGV 444
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
+ K+S +VP +R ++ ++Y + C + + + M
Sbjct: 445 FKEMKKS-----GYVP--------ERDTYVSLISSY-----SRCGLFDQAMEIYKRMIEA 486
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ ++ ++ A G E A ++ M PD ++Y++ + +K+L +
Sbjct: 487 GIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKM 546
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
SL E++ +I+ + TL+ S+ +L + ++
Sbjct: 547 KSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF 585
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 112/293 (38%), Gaps = 53/293 (18%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV-EQAMHL 420
D Y+ ++ + A ++ A+ V M++ GV P +T++ +++ + + ++ + L
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLAL 234
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G + N L+ C + A ++F
Sbjct: 235 VDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEM--------------------- 273
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNE 538
+ F+P T N L+ Y ++ E
Sbjct: 274 --------------------------RAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKE 307
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ +++ LI + G +E A Q+ + M G+ PDV+ YTT + R+ +
Sbjct: 308 MEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGK 367
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A + EM +PNL TY L++ G E+ + V+ ++ AG
Sbjct: 368 IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEM---MIVFDEIRSAG 417
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K +L +A+ ++ S ++ + +I + G G K I ++ ++ L+
Sbjct: 574 KVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTA 633
Query: 293 VFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSLM++ + D + + ++ D SYN ++ A G A ++ E+
Sbjct: 634 TYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEM 693
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K G++ D+ TY+ VK + ++ A+ + M++ G PN T+++++ +
Sbjct: 694 K---CSGLVP-DIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCS 749
Query: 411 AGLV 414
G +
Sbjct: 750 HGRI 753
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 168/400 (42%), Gaps = 67/400 (16%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH------------------ 352
+ + M ++G ++ +Y LL C+ GNT+LA +++ E+ +
Sbjct: 184 LLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT 243
Query: 353 ------------------LEAKG-VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
LE KG + DV YS+I+ W+ A + +M+ G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRA 452
V PN +T++ LI+A AG +E+A HL + M+Q G P++ N L+ C+E + D A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG-RIDDA 362
Query: 453 FRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN---------- 499
LF S + V+ +G +E K +P
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTG 422
Query: 500 --------SHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
++ F K P + TYNIL+ C + + +A L + + P+
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPS 482
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ LID + +E A ++ + +G+ P+V+ YT I +S +L+ A LF
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFL 542
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ PNLVT+ TL+R + E+Q+ + + Q+M
Sbjct: 543 GMEEKGCAPNLVTFNTLMRG---FCQNDEMQKVVELLQEM 579
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 175/423 (41%), Gaps = 62/423 (14%)
Query: 254 PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
PN+ TIID +C D + K + ++ +++ + ++ ++ ++S+++ H ++
Sbjct: 236 PNLVCYCTIID--SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL-------- 361
++ M GV ++ ++N+L+ A C AG K EA +LKL
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAG------------KMEEANHLLKLMIQRGESP 341
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D FTY+T++ F A + M S G+ + ++++ LIN +G + +A L+
Sbjct: 342 DTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLY 401
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM+ P N LL LFR + GE
Sbjct: 402 REMMCKEIMPTVITYNTLLTG------------LFREGKVRDAWNLFGE----------- 438
Query: 482 MEHKDKQSITNTPNFV-----PNSHYSSFDKRF------SFKPTTTTYNILMKACCT--D 528
M+ D + T N + N+H S + F F+P+ +N L+ C
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L N + GL PN I++T++I SG +E A + M E G +P++V + T
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ ++ +++ L +EM P+ T ++ S+ E L +
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Query: 649 KAG 651
+ G
Sbjct: 619 QTG 621
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 154/381 (40%), Gaps = 64/381 (16%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+++ L T I FN+L+ A ++ + +YK M +G+ D + NIL+
Sbjct: 78 SVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCY 137
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C + GE+ + + T++++VK A + M+ G
Sbjct: 138 CNLNKVDFGLAVLGEM----LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAG------CEPNSQC-CNILLQACVEAC 447
PN +T+ +L+N G A+ L EEML +PN C C I+ C +
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D+ LF +E K + +P+ V YSS
Sbjct: 254 -IDKGKELF-------------------------LEMKGRGI---SPDVVA---YSS--- 278
Query: 508 RFSFKPTTTTYNILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
I+ C T + K L NEM G+ PN +++ +LIDA +G +E
Sbjct: 279 ------------IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +LK+M + G SPD Y T I R+ A LF M+ I+ + V+Y L+
Sbjct: 327 ANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLIN 386
Query: 627 ARSRYGSLHEVQQCLAVYQDM 647
+ G + E ++ +Y++M
Sbjct: 387 GYCKSGRMVEAKK---LYREM 404
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 502 YSSFDKRFSFKPTT--TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+S F+ +PT +++N L+ A Y+ V +L M +GL+P+ I+ ILI+
Sbjct: 77 FSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINC 136
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
V+ L +L M G SP+ V +T+ +K R+ +A L +M +PN
Sbjct: 137 YCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPN 196
Query: 618 LVTYITLLRARSRYGS------LHE 636
+VTY TLL G+ LHE
Sbjct: 197 VVTYGTLLNGLCMTGNTMLAVKLHE 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP+ + T+ID G C G +R ++ + S+ + + +N L+N + +
Sbjct: 340 SPDTFTYNTLID--GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEA 397
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKG 357
++Y+ M +M + +YN LL G A ++GE+K ++ G
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457
Query: 358 VLK-------LDVFTY-------------STIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ K +++F Y + ++ A+ ++A ++ + G+ PN
Sbjct: 458 LCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPN 517
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
IT++ +I+ +G +E A LF M + GC PN N L++ CQ D
Sbjct: 518 VITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG---FCQND 567
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 56/345 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + M ++G+ +M N L+K C G A+ ++ V ++ LK D ++Y+T
Sbjct: 352 VRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF--VGMVDWN--LKPDCYSYNT 407
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A + E+ML G+TP +T++++I + G + A+HL+ M++ G
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN C +L + DRA L++ LG
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKE--------ILGR------------------ 501
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F +T +N ++ C A+ + M+ +GLSP
Sbjct: 502 ---------------------GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ L D +GNV+ A QI +M MS + Y + I + ++L L
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM+ + PN+VTY TL+ S + ++ + +Y +M + G
Sbjct: 601 VEMQTRGLSPNVVTYGTLI---SGWCDEQKLDKAFHLYFEMIERG 642
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 176/393 (44%), Gaps = 24/393 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN C T++D GD ++ +++++ + T + FN++++ L
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M++LG+ D +Y L C GN QE + ++K + + + + Y++++
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGN---VQEAF-QIKGVMERQAMSASIEMYNSLI 584
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +M + G++PN +T+ +LI+ + +++A HL+ EM++ G
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFT 644
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN C+ ++ + L+R +S+ V L + D + + N + DK +
Sbjct: 645 PNVVVCSKIVSS------------LYRDDRISEATVILDKMLDFDILAVHN-KCSDKL-V 690
Query: 491 TNTPNFVPNSHYSSFDKR--FSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
N S DK + YNI + C +++++ + + G P
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ ++ LI AC SGNV+ A ++ M E G+ P++ Y I + + +A LF
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ + PN VTY L+ R G L + +
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 133/348 (38%), Gaps = 60/348 (17%)
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VF+ LM A K L V+ M ++G + + S + LL G +A ++ ++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
G++ DV+ S +V +A++V E M+ G+ PN +T++ L+N
Sbjct: 218 V---GTGIVP-DVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVG 273
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G E + M + G N C +L++ + + D A +L R
Sbjct: 274 RGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLRE------------ 321
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--- 527
V D+R Y +L+ C
Sbjct: 322 --------------------------VEEDELLVVDER--------VYGVLVDGYCQMGR 347
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D R++ +EM VGL N + LI G V A ++ M + + PD +
Sbjct: 348 MEDAVRIR---DEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYS 404
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
Y T + R ++ +AF L EEM I P +VTY T+++ GS
Sbjct: 405 YNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS 452
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 158/398 (39%), Gaps = 76/398 (19%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
+ G+ D A+R D + NM IC T+I Y K + E R
Sbjct: 344 QMGRMED---AVRIRDEMLRVGLKVNMVICNTLIK------GYCKLGQVCEAER------ 388
Query: 290 NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT----VLAQE 345
V+ M + D SYN LL C G +L +E
Sbjct: 389 ---------------------VFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ G+ G+ V TY+T++K D + AL + M+ GVTPN I+ +++
Sbjct: 428 MLGD-------GITP-TVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLS 462
+ G ++AM L++E+L G ++ N ++ + + A +F + LS
Sbjct: 480 DCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLS 539
Query: 463 KTQV---ALGEDY--DGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
++ L + Y +GN ++ ++Q+++ + + S D F +
Sbjct: 540 PDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEM----YNSLIDGLFKIRKLND 595
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++L+ EM+T GLSPN +++ LI ++ A + M E
Sbjct: 596 VTDLLV---------------EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G +P+VV + + R R+ +A + ++M + I
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI + C +G A+ + + L ++G L D FTY T++ + + A K++
Sbjct: 720 YNIAIDGLCKSGKLDEARSV---LSVLMSRGFLP-DNFTYCTLIHACSVSGNVDEAFKLR 775
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ML G+ PN +++LIN G +++A LF ++ Q G PN+ NIL+
Sbjct: 776 DEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835
Query: 447 CQFDRAFRLFRSWT 460
D+A RL T
Sbjct: 836 GDLDKASRLREKMT 849
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 50/277 (18%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++K FA+ + AL V ++M G P + S L+ G A+ +F++++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+ C+I++ A + + D A + +E
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEV--------------------------LEKM 252
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
K+ + +P TYN L+ D+ V+ ++ M G
Sbjct: 253 VKEGL---------------------EPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQA 602
+S N ++ T+L+ G ++ A ++L+ + ED + D Y + + R++ A
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDA 351
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ +EM ++ N+V TL++ + G + E ++
Sbjct: 352 VRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAER 388
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVG 543
D N + +H S K F F + +++LMKA AL +EM +G
Sbjct: 129 DLHCTNNYRAYAVCNHVFSVYKEFGF--CSGVFDMLMKAFAERGMTKHALYVFDEMSRIG 186
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P S + L+ G A+ + + G+ PDV + + + R+ A
Sbjct: 187 RVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAM 246
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ E+M ++PN+VTY L+ G V++ L
Sbjct: 247 EVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVL 284
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ +++ G+ P+ +I+++A G V+ A+++L+ M ++G+ P+VV Y + V
Sbjct: 213 VFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYV 272
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + M + N+VT L+R + G + E ++ L
Sbjct: 273 GRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL 319
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 185/430 (43%), Gaps = 20/430 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C + F K+ + A +D K P++ +I V G+ +S ++ +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ V N++ FN + + + +++ G+ D+ SYN L+ C V
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E Y H ++ + FTY+TI+ F A Q A K+ D + G P+ T+
Sbjct: 304 EA-ECY---LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
SSLIN N G + +AM +F E ++ G + + N L++ + + ++ L
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG------LSKQGLVLQALQL 413
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + G D T + + K + N + N + P T+N L
Sbjct: 414 MKDMMEHGCSPDIWTYNLV-VNGLCKMGCLSDANGILNDAIAK-----GCIPDIFTFNTL 467
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C KA +++ M + G++P+ I++ L++ + ++ + K M E G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P+++ Y I+ + +++ +A LF+EMK + P++VT TL+ G L + +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 640 CLAVYQDMWK 649
+ +K
Sbjct: 588 LFVTIEKEYK 597
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 47/387 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHDLKF-TL 309
P+ + ++I+ G+C GD ++ A++ + + +I ++N+L+ ++ L L
Sbjct: 354 PDEFTYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ K+M + G D+ +YN+++ C G A I + AKG + D+FT++T+
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI---AKGCIP-DIFTFNTL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+++ + MLS G+TP+ IT+++L+N A ++ + F+ ML+ GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL-----GEDYDGNTDRISN 481
PN NIL+++ + + A LF+ L+ V L G +G D+
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + + +K + F +T +NI++ A C + + L ++M
Sbjct: 588 L-------------------FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV----CVR 595
+P++ ++ ++ID+ +GN++ A L G+ P ++TT KV CV
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP---SFTTCGKVLNCLCV- 684
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ RL +A + M I P V I
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEEVNSI 711
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 162/386 (41%), Gaps = 58/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASY 327
G ++ ++E + + ++ +N++MN+ F+ +VY M+ +G+ D+ ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C+ G A + + ++ +G + + +Y ++ F A + +
Sbjct: 150 TIRMKSFCITGRPTAALRL---LNNMPGQGC-EFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML G+ P+ +T++ LI+ G V+++ LF ++++ G PN NI +Q
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
D A RL S + +T
Sbjct: 266 AIDEAARLLESIV--------------------------SEGLT---------------- 283
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YN L+ C V+A +++M G+ PN ++ +I+ +G ++
Sbjct: 284 -----PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A +IL+ G PD Y++ I + +A ++F E + +++ Y TL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ S+ G V Q L + +DM + G
Sbjct: 399 KGLSKQGL---VLQALQLMKDMMEHG 421
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 144/340 (42%), Gaps = 57/340 (16%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +++ G+ DV+T + ++ F V + G P+T T+++LI
Sbjct: 98 KQMDSLGIPS-DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCV 156
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + +A+HLF++M+ G +PN L+ + A RL RS + +
Sbjct: 157 EGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI- 215
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC-- 526
+ I + KD+Q N + F + + P +TYN ++ C
Sbjct: 216 ----TYNTIIDCLFKDRQV---------NEALNIFSEMIAKGISPNVSTYNSIIHGLCKF 262
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ V LMNEM + PN + +T L+DA G V A ++ +M + G+ PDVV Y
Sbjct: 263 SEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322
Query: 587 TTAIKV-CVRS----------------------------------KRLKQAFSLFEEMKH 611
T + C+RS +R+ +A LFEEM
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ PN+VTY TL+ G L + +A++ +M +G
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDA---IALFHEMVASG 419
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 170/412 (41%), Gaps = 30/412 (7%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+A+R + + PN+ TIID ++ I+ ++ ++ ++ N+ +NS++
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + K + M +M ++ + L+ A C G +A ++ V + +
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV---VDVMIQR 313
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV + DV TY+ ++ A KV + M+ G PN I++S+LIN +++
Sbjct: 314 GV-EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDK 372
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
AM+LFEEM Q PN N L+ + A LF S Q+ Y
Sbjct: 373 AMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG-QIPDLVTYRILL 431
Query: 477 DRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDY 529
D + H D+ ++I + + P +YNI++ C +
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGS----------------NLAPDIQSYNIVIDGMCRVGEL 475
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L + + + GL P+ ++TI+I+ G + A ++ + M DG SPD Y
Sbjct: 476 EAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +R+ A L +EM + T ++ S G V+Q L
Sbjct: 536 TRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 503 SSFDKRFSFKPTTTTYN---ILMKACCTDYYR-VKALMNEMRTVGLSPNHISWTILIDAC 558
SSF++ +P + + IL +Y V +L +M ++G+ + + I+I++
Sbjct: 60 SSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSF 119
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPN 617
V+ +L + + G PD +TT I+ +CV K + +A LF++M QPN
Sbjct: 120 CHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK-IGEALHLFDKMVGEGFQPN 178
Query: 618 LVTYITLLRARSRYGS 633
VTY TL+ + G+
Sbjct: 179 GVTYGTLIHGLCKVGN 194
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ RD ++ AS + P++ R ++D ++ A+ + + N+ +I
Sbjct: 403 GRLRDAIALFHEMVASGQ---IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N +++ +L+ +++ ++ G+ D+ +Y I++ CL G A +++ E
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ G D TY+ I + F A+++ ++ML G + + T + ++ +
Sbjct: 520 ---MNTDGCSPDDC-TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLS 575
Query: 410 NAGLVEQAMHLFEEMLQ 426
+ GL + + E +Q
Sbjct: 576 DDGLDQSVKQILHEFVQ 592
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 179/413 (43%), Gaps = 60/413 (14%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNI 291
+R + + Y+ K L + T I + G+C G +++ I+E++++Q + N+
Sbjct: 38 RRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNV 97
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
++SL++ A L+ + ++ M GV ++ +N+L+ C G + A+++
Sbjct: 98 ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL--- 154
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +G++ LD+ TY++++ F A K+ M S G N I+++ LIN
Sbjct: 155 LEVTIQRGII-LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
VE+AM+L+ EM Q G PN + + LL ++ + A +LF S V
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV--- 270
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD- 528
+ Y I + C +
Sbjct: 271 --------------------------------------------DSCIYVIFLDGLCKNG 286
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ L NE+++ + S++ LID +G VE A + K + ++G+ P+VV
Sbjct: 287 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYGSLHEV 637
I R +++ +A LFE+M+ + P+++TY TLLR L EV
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 399
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 133/355 (37%), Gaps = 76/355 (21%)
Query: 288 TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
TLNI N L N+N + L + + G + D+ +YN L+K C +A I
Sbjct: 12 TLNILA-NCLCNLNR--VSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI- 67
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
I+ A ++ E+M + G+ PN I++SSL++
Sbjct: 68 ---------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQV 466
AG +E++ LF EM+ G +PN N+L+ C E ++ + L + +
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEG-------KVIEAKKLLEVTI 159
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G D TYN L+ C
Sbjct: 160 QRGIILD-----------------------------------------LVTYNSLIDGFC 178
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
D + L M + G N IS+TILI+ VE A+ + M + G P+V
Sbjct: 179 KIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 238
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y+T + +++ ++ A LF MK I + Y+ L + G L E +
Sbjct: 239 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 293
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
R + P TYN L+K C RV + ++ I+ID G+ + A
Sbjct: 38 RRGYIPDIVTYNTLIKGLC----RVHRI------------SVATCIIIDGLCKVGHEDEA 81
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I + M+ GM P+V++Y++ + + +L+++ LF EM +QPNLV + L+
Sbjct: 82 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDI 141
Query: 628 RSRYGSLHEVQQCLAV 643
+ G + E ++ L V
Sbjct: 142 LCKEGKVIEAKKLLEV 157
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 33/261 (12%)
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
AG++P+ T + L N N V + + +L+ G P+ N L++ C+ R
Sbjct: 4 AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKG---LCRVHR 60
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRFS 510
VA DG E K+ +PN YSS F
Sbjct: 61 ------------ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF- 107
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
C K L NEM G+ PN + + +LID G V A ++
Sbjct: 108 -------------CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L++ + G+ D+V Y + I + L A LF M + N ++Y L+
Sbjct: 155 LEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILING--- 211
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
Y + +V++ + +Y +M + G
Sbjct: 212 YCKIWKVEEAMNLYNEMPQVG 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 42/279 (15%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P I + + V F L + R ++ PN+ +ID+ G +++
Sbjct: 93 MIPNV-ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEA 151
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ + E + + L++ +NSL++ DL +++ +M G + SY IL+
Sbjct: 152 KKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILING 211
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A +Y E+ + + +V TYST++ A K+ M ++G
Sbjct: 212 YCKIWKVEEAMNLYNEMPQVGKRP----NVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 267
Query: 394 VTPNTI-----------------------------------TWSSLINACANAGLVEQAM 418
++ ++ ++S LI+ AG VE A
Sbjct: 268 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 327
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
F+++ Q G +PN CNI++ Q D+A LF
Sbjct: 328 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFE 366
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 66/306 (21%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI------------- 405
L D+FT + + + L +L G P+ +T+++LI
Sbjct: 6 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65
Query: 406 ----NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ G ++A +FEEM G PN + L+ A + + + RLF
Sbjct: 66 CIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVD 125
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
Q PN V +N+L
Sbjct: 126 QGVQ----------------------------PNLV-------------------QFNVL 138
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + K L+ G+ + +++ LID G++ A ++ M G
Sbjct: 139 IDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGC 198
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ ++YT I + ++++A +L+ EM +PN+ TY TLL + G + + +
Sbjct: 199 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 258
Query: 640 CLAVYQ 645
V +
Sbjct: 259 LFGVMK 264
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 539 MRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M GLSP+ + IL + C + EG + I+R G PD+V Y T IK R
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRR-GYIPDIVTYNTLIKGLCRVH 59
Query: 598 RLK-----------------QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
R+ +A +FEEMK + PN+++Y +L+ G L E ++
Sbjct: 60 RISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR- 118
Query: 641 LAVYQDMWKAG 651
++ +M G
Sbjct: 119 --LFNEMVDQG 127
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ ++ D SY+ L+ C AG +A E + K L +G L+ +V T +
Sbjct: 292 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF---KQLSQEG-LQPNVVTCNI 347
Query: 369 IVKVFADAKWWQMA---LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ F + A + E M G TP+ IT+++L+ + +E+ ++L +M
Sbjct: 348 MIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 407
Query: 426 Q 426
+
Sbjct: 408 K 408
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMNVNAHDLKF-TLE 310
+PN Y T+I G ++ +++++ ++ V ++N+L+ K T
Sbjct: 552 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 611
Query: 311 VYKN-MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y++ M + GV +A+YN+L+ A + G E Y V+ + KG L DVFTY+ +
Sbjct: 612 LYRDRMVERGVAMTVATYNLLVHALFMDGR---GTEAYELVEEMGGKG-LAPDVFTYNIL 667
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + AL++ E+M GV +T+++LI A + G V++ LF+E ++ G
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + + DRAF + +GE ME K
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEI------------MGE-----------MEKK---- 760
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
P TYN LM+ C + L++EM G+ P+
Sbjct: 761 --------------------RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI G+V+ AL+I M G +P ++ Y I+ ++ + A ++ +
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 860
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 861 EMVENGITPDDSTYISLIEG 880
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 44/409 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S +Y ++S ++ ++ + L++ F L + +M +L + ++NI+L
Sbjct: 438 HATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL--FADMFRLRLPLCTTTFNIML 495
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG A E+ ++ A TY+T++ F Q AL + +M
Sbjct: 496 RHLCSAGKPARALELLRQMPRPNA--------VTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ PN T+ ++I+ G V++A+ +F+EML G +P + N L+ + +
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNT----DRISNMEHKDKQSITNTPNF 496
D A L+R + + Y DG + + M K T N
Sbjct: 608 DTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666
Query: 497 VPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ N H + + +R + T TY L+ A L +E
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ + + LI++ SGN++ A +I+ M + ++PD V Y T ++ R+ +A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +EM IQP+LVTY TL+ S G +V+ L + +M G
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKG 831
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 164/386 (42%), Gaps = 28/386 (7%)
Query: 256 MYICRTIIDVC--GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
+ +C T ++ +C +RA+ +L Q N +N+++ + ++ L++
Sbjct: 484 LPLCTTTFNIMLRHLCSAGKPARAL--ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDI 541
Query: 312 YKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M ++ G+ + +Y ++ C G A +++ E + KG +K + Y+ ++
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE---MLTKGEVKPEAVMYNALI 598
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ D AL ++ M+ GV T++ L++A G +A L EEM G
Sbjct: 599 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 658
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ + +A +F + + + + T I + K +
Sbjct: 659 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT----YTALIYALSKKGQVQE 714
Query: 491 TNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
T+ FD+ R +P YN L+ + T + R +M EM ++P
Sbjct: 715 TD----------KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ L+ G V+ A +++ M E G+ PD+V Y T I +K A +
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
EM + P L+TY L++ + G
Sbjct: 825 NEMMNKGFNPTLLTYNALIQGLCKNG 850
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 164/364 (45%), Gaps = 27/364 (7%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ +Q + N N ++ V + +++ +++ M GV D SY +++ C G
Sbjct: 160 EMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIG 219
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N + A + + + +G + +D T++ I+ F+ + AL ++ G+ PN
Sbjct: 220 NILEADKW---LSVMLERGFV-VDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNL 275
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
I ++ +I G ++QA + EEM+ G +PN L+ + ++AFRLF
Sbjct: 276 INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF-- 333
Query: 459 WTLSKTQVALGEDYDGN----TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ E++ N T IS +DK N + S K P
Sbjct: 334 -----LKLVRSENHKPNVLTYTAMISGYCREDK---LNRAEMLL-----SRMKEQGLVPN 380
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TY L+ C ++ R LMN M + G SPN ++ +++ G V+ A ++L+
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++G+ PD Y + + + ++QA +LF +M IQP++ +Y TL+ R
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500
Query: 633 SLHE 636
+ E
Sbjct: 501 RMKE 504
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 132/353 (37%), Gaps = 63/353 (17%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE--VKHLEAKGV-LKL 361
LK +E+ M G++ + + N ++K G A+ ++ E V+ ++ + ++
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
V Y I + KW + ML G + T++ +I+ + G +A+ F
Sbjct: 211 MVVMYCKIGNILEADKWLSV-------MLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++ G EPN +++ + +AF + E+ G
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEML-------------EEMVGK------ 304
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL---MNE 538
+KP T+ L+ C + KA +
Sbjct: 305 ----------------------------GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R+ PN +++T +I + A +L M+E G+ P+ YTT I ++
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A+ L M PNL TY ++ + G VQ+ + +D ++ G
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRG---RVQEAYKMLEDGFQNG 446
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN T+ID G++ ++ + + S+ + N+ +N+++N + E YK
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ-EAYK 437
Query: 314 NMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ + G+ D +YNIL+ C N A ++ ++ K ++ D+ +Y+T++
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM----LKIGIQPDIHSYTTLI 493
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
VF + + E+ + G+ P T++S+I G + AM F + GC
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRS 458
P+S ++ + + D A L+ S
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDS 581
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 218 PRADILFCNFVREFGK-KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P D + +R G+ KRD + L +D ++ +P+ +ID+ G +
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATL-LFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKAC 334
+ + + +N+ + Y NSL+ + + L E+++ M+K GV + S+N +L C
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCC 234
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG LA + E +EA+G+ K + T++T++ AK+ A KV ++M SAG+
Sbjct: 235 GKAGKVGLAYQFMDE---MEARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ T++ +I A A AG + +A +F +M +AGC N N+L+ A V+A ++ A
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Query: 455 LF 456
++
Sbjct: 351 IY 352
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 175/417 (41%), Gaps = 61/417 (14%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
RY +V A + +G+ + + + KH S PN Y + +I G+
Sbjct: 11 RYHVLVSNA------VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGN 64
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ + + + + + ++N +++ A+ + +++ +M+ +G AD +Y I
Sbjct: 65 VVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAI 124
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+++ A ++ E +E +G Y+ ++ ++ A + A+ V + M
Sbjct: 125 LIRSLGRCKRDEEATLLFDE---MEERGCTP-SAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L + P+ T +SLI A + G E A +FE M ++G N+ N +L C +A +
Sbjct: 181 LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKV 240
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A++ + ME +
Sbjct: 241 GLAYQF-----------------------MDEMEAR------------------------ 253
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP + T+N L+ Y +A ++ EMR+ GL+P+ ++T +I+A +GN+ A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
++ M + G S +VV Y I V++ R + A ++ +MK I P+ +T L
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++L N Y + ++ V A ++ ++ M K G+ D YN++L
Sbjct: 37 FQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGK 96
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A +++ +K + D +TY+ +++ K + A + ++M G TP
Sbjct: 97 ANMIDEACKLFASMKSMGCPA----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTP 152
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I+ AG +E AM + ++ML P+ N L+ A + + A +F
Sbjct: 153 SAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIF 212
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ K+ VA+ T
Sbjct: 213 ER--MKKSGVAV---------------------------------------------NTV 225
Query: 517 TYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
++N ++ CC +V M+EM G+ PN I++ LI+ G + A ++L+
Sbjct: 226 SFNAMLD-CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR G++PDV YT I+ ++ + +AF +F +M+ N+VTY L+ A + G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y DM K G
Sbjct: 345 YQDARD---IYFDMKKKG 359
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 510 SFKPTTTTYNILMKACCTDYY----RVKALMNEMRTV---GLSPNHISWTILIDACGGSG 562
+ + T Y++L+ Y R+ +M+E + + G PN ++ +I + +G
Sbjct: 4 AIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAG 63
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
NV A+ L M + G+ PD + Y + ++ + +A LF MK + TY
Sbjct: 64 NVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYA 123
Query: 623 TLLRARSR 630
L+R+ R
Sbjct: 124 ILIRSLGR 131
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ GRI+ + VLKK+ + +AP D L R +G E+ + E +++
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAP----DDYTLNSLITAVSR---TGRTELACEIFERMKKS 218
Query: 185 RLPVKELDEEFRIVQLCVNKP-DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRA 243
+ V + F + C K V LA ++
Sbjct: 219 GVAVNTV--SFNAMLDCCGKAGKVGLAYQF------------------------------ 246
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
D + PN T+I+ G ++ + +++RS +T +++ + ++
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A ++ E++ +M+K G A++ +YN+L+ A AG A++IY ++K KG+L
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKK---KGILP- 362
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKE 387
D T + + ++ K ++L E
Sbjct: 363 DAITATVLQQLAGKCKLSGISLDENE 388
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 218 PRADILFCNFVREFGK-KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P D + +R G+ KRD + L +D ++ +P+ +ID+ G +
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATL-LFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKAC 334
+ + + +N+ + Y NSL+ + + L E+++ M+K GV + S+N +L C
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCC 234
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG LA + E +EA+G+ K + T++T++ AK+ A KV ++M SAG+
Sbjct: 235 GKAGKVGLAYQFMDE---MEARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ T++ +I A A AG + +A +F +M +AGC N N+L+ A V+A ++ A
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Query: 455 LF 456
++
Sbjct: 351 IY 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 171/414 (41%), Gaps = 62/414 (14%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY----- 272
R +L N + +G+ + + + KH S PN Y + +I G+
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ + I L + N+ V + L N D +++ +M+ +G AD +Y IL++
Sbjct: 71 LLDKMIKTGLEPDTLLCNV-VLDGLGKANMMD--EACKLFASMKSMGCPADDYTYAILIR 127
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
+ A ++ E +E +G Y+ ++ ++ A + A+ V + ML
Sbjct: 128 SLGRCKRDEEATLLFDE---MEERGCTP-SAPAYTNVIDIYCKAGRIESAMVVLKKMLDK 183
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ P+ T +SLI A + G E A +FE M ++G N+ N +L C +A + A
Sbjct: 184 NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLA 243
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + ME + K
Sbjct: 244 YQF-----------------------MDEMEAR------------------------GIK 256
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P + T+N L+ Y +A ++ EMR+ GL+P+ ++T +I+A +GN+ A ++
Sbjct: 257 PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEM 316
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
M + G S +VV Y I V++ R + A ++ +MK I P+ +T L
Sbjct: 317 FGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+++L N Y + ++ V A ++ +E+ M K G+ D N++L
Sbjct: 37 FQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGK 96
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A +++ +K + D +TY+ +++ K + A + ++M G TP
Sbjct: 97 ANMMDEACKLFASMKSMGCPA----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTP 152
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++++I+ AG +E AM + ++ML P+ N L+ A + + A +F
Sbjct: 153 SAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIF 212
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ K+ VA+ T
Sbjct: 213 ER--MKKSGVAV---------------------------------------------NTV 225
Query: 517 TYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
++N ++ CC +V M+EM G+ PN I++ LI+ G + A ++L+
Sbjct: 226 SFNAMLD-CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
MR G++PDV YT I+ ++ + +AF +F +M+ N+VTY L+ A + G
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 634 LHEVQQCLAVYQDMWKAG 651
+ + +Y DM K G
Sbjct: 345 YQDARD---IYFDMKKKG 359
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+ +M+E + + G PN ++ +I + +GNV A+++L M + G+ PD +
Sbjct: 29 RIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCN 88
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ ++ + +A LF MK + TY L+R+ R
Sbjct: 89 VVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGR 131
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+ GRI+ + VLKK+ + +AP D L R +G E+ + E +++
Sbjct: 166 KAGRIESAMVVLKKMLDKNLAP----DDYTLNSLITAVSR---TGRTELACEIFERMKKS 218
Query: 185 RLPVKELDEEFRIVQLCVNKP-DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRA 243
+ V + F + C K V LA ++
Sbjct: 219 GVAVNTV--SFNAMLDCCGKAGKVGLAYQF------------------------------ 246
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
D + PN T+I+ G ++ + +++RS +T +++ + ++
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A ++ E++ +M+K G A++ +YN+L+ A AG A++IY ++K KG+L
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKK---KGILP- 362
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKE 387
D T + + ++ K ++L E
Sbjct: 363 DAITATVLQQLAGKCKLSGISLDENE 388
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 57/386 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ F + K+M+KL + D+ ++NI L A E++G + +G + DV
Sbjct: 94 EFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGR---MVERG-REPDV 149
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN-------------------------- 397
T++ I+ K + A++ +ML G+ P+
Sbjct: 150 VTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIG 209
Query: 398 ----------TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
T+ +++LI+ AG +++A+ + M + GC+P+ N+LL C
Sbjct: 210 VISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEF 269
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
F+ A +L + S + + Y+ H DK + VP K
Sbjct: 270 MFEEAVKLLKKMECSAIEPDV-YSYNQLLKAHCKANHPDKAYLFMVTKMVP--------K 320
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
F +YN ++KA C+ + R L EM G++P+ +++TILI A GN +
Sbjct: 321 GFC---DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L +M G+ PD + YTT I +S +++ A S+F +M I P++V+Y L+
Sbjct: 378 MAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALI 437
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + EV +Y+ M + G
Sbjct: 438 NGFCKSLRVGEVMH---LYEQMLQRG 460
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 23/334 (6%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ + NM G+ D + L C G LA E+ + + + G+ ++ Y+
Sbjct: 168 AVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYEL---IIGVISGGLSEVSTLVYN 224
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ F A AL + M G P+ +T++ L+N C N + E+A+ L ++M +
Sbjct: 225 ALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECS 284
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS-NMEHKD 486
EP+ N LL+A +A D+A+ + + K G D +S N K
Sbjct: 285 AIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPK----------GFCDVVSYNTIIKA 334
Query: 487 KQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTV 542
SI+N Y F++ R P T+ IL+KA + K L++ M +
Sbjct: 335 FCSISNN-----RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGM 389
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I +T +ID SG VE A I M E G++PDVV+Y I +S R+ +
Sbjct: 390 GLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEV 449
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L+E+M P+ VTY ++ A R L +
Sbjct: 450 MHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSD 483
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ M + G+ D+ ++ IL+KA GN+ +A+++ + + G+L +F Y+TI
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKL---LDLMAGMGLLPDRIF-YTTI 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + +MA + DM+ G+TP+ +++++LIN + V + MHL+E+MLQ G
Sbjct: 402 IDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGS 461
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSK 463
P+ +++ A V + A R++ R TL +
Sbjct: 462 FPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDR 500
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 181/394 (45%), Gaps = 40/394 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 147 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 260
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 377
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 378 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
++A++L ++MK P+ TY TL+RA R G
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 155 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 209
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 210 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 324
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 325 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 381
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 382 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 494
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 366
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 367 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 458
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 459 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 482
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 483 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525
Query: 610 K 610
+
Sbjct: 526 R 526
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 30/315 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ T S+++ + K A+ + + M+ G P+TIT+++LI+ +A+ L +
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M+Q GC+PN +++ + D AF L +K + + ++ D +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV-VIFNTIIDSLCKY 197
Query: 483 EH--------KDKQSITNTPNFVPNS----------HYSSFDKRFS------FKPTTTTY 518
H K+ ++ PN V S +S + S P T+
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A + + + L ++M + P+ ++ LI+ ++ A Q+ + M
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PD+ Y T IK +SKR++ LF EM H + + VTY TL++ G
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 637 VQQCLAVYQDMWKAG 651
Q+ V++ M G
Sbjct: 378 AQK---VFKQMVSDG 389
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P+ T + L+ C R+ AL+++M +G P+ I++T LI
Sbjct: 72 KLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 130
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A+ ++ M + G P++V Y + + + AF+L +M+ +I+ ++V + T+
Sbjct: 131 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 190
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + +Y V L ++++M G
Sbjct: 191 IDSLCKY---RHVDDALNLFKEMETKG 214
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 513 PTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
P+ +N L+ A D AL+ +M +G P+ ++ + L++ + A+
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M E G PD + +TT I + +A +L + M QPNLVTY ++
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 629 SRYGSL 634
+ G +
Sbjct: 160 CKRGDI 165
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 22/323 (6%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+ L A C G A+ + + L + DV TY+T++ A V
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLG----MPPDVVTYNTLLAAHCRASGLDAGFAVLH 69
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M AGV+P+ IT++SLI A GL +A+ LF+EMLQAG P++ N L+ +
Sbjct: 70 RMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSG 129
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A+R+F K Y+ D + H TN + +
Sbjct: 130 HPEDAYRVFADMA-EKGVAPCATTYNTLLDGLFRFGHA-----TNAYRMF------RYLQ 177
Query: 508 RFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R TYN ++ C Y R+ ++ E+ +PN +++T ++ C G
Sbjct: 178 RTGLPVGIVTYNTMINGLCKSGKVGYARM--VLRELGRTEHAPNVVTYTTVMKCCFKYGR 235
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L+ + E G PD+ Y T I V+ R+++A + E M + + Y T
Sbjct: 236 FDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYNT 295
Query: 624 LLRARSRYGSLHEVQQCLAVYQD 646
L+ R + G L + + L++ ++
Sbjct: 296 LIYLRCKEGKLDDAFELLSMMEE 318
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 149/371 (40%), Gaps = 24/371 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ +R V+ + +NSL+ A L+++ M + GV D SYN L+
Sbjct: 66 AVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCL 125
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+G+ A ++ ++ KGV TY+T++ A ++ + G+
Sbjct: 126 FRSGHPEDAYRVFADMAE---KGVAPCAT-TYNTLLDGLFRFGHATNAYRMFRYLQRTGL 181
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+T++++IN +G V A + E+ + PN +++ C + +FD+
Sbjct: 182 PVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLE 241
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F LS + D IS + K + NT YS R F+
Sbjct: 242 TF----LSLLEGGYIPDLFPYCTVISALVKKGRMEEANT--------YSELMIRSGFRLD 289
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ YN L+ C + A L++ M GL + +++IL++ G+ E A + L
Sbjct: 290 SACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQLC 349
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M M +V+AY + +S + A L MK + TY +L+ + G
Sbjct: 350 YMEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNMK----LKDDFTYTSLVHGLCKVG 405
Query: 633 SLHEVQQCLAV 643
H + L +
Sbjct: 406 RYHMASKFLRI 416
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 163/409 (39%), Gaps = 58/409 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC----LAGNTVL--AQ 344
+FNSL++ NA D + +++ M G YNI + + C L +L A+
Sbjct: 343 LFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAE 402
Query: 345 EIYGE--------------------------------VKHLEAKGVLKLDVFTYSTIVKV 372
++Y E VK + KG + D TY+ ++
Sbjct: 403 KVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVP-DASTYTKVITF 461
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
AK A + ++M GV P+ T++ LI++ AGL+EQA F+EM AGC PN
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
LL A +++ Q +A +F ++ + + G G + +
Sbjct: 522 VVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYA 581
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
K + T + + + Y + P TY L+ C A L++ M
Sbjct: 582 K----LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA 637
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PN I + L+D G ++ A ++ M + G P V YT+ I + RL A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +M PN+VTY ++ + G E ++ L + M K G
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTG---ETEKALNLLSLMEKKG 743
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 171/455 (37%), Gaps = 97/455 (21%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG+ G + K+ I +++ + + + ++ A + +++ M+K+GV
Sbjct: 427 LCGV-GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVK-----------------HLEAKGVLKL-DVF 364
D+ +Y IL+ + C AG AQ + E++ +L++K + + D+F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545
Query: 365 -------------TYSTIVKVFADAKWWQMALKVKEDMLSAG----------------VT 395
TYS ++ A Q A +V ++ ++
Sbjct: 546 HRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTIS 605
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+ +L+N A V A L + ML AGCEPN + L+ + + D A +
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F L T+ T I M + + S + S P
Sbjct: 666 F----LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA--------MKVLSQMLKDSCNPNV 713
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY ++ C KAL ++ M G SPN +++T LID G +G V+ L++
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQ 773
Query: 574 MREDGMSPDVVAYTTAIKVCVR---------------------------------SKRLK 600
M+ G +P+ V Y I C SKR
Sbjct: 774 MKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFL 833
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ L EEM+ + P Y L+ + S+ G L
Sbjct: 834 ASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 146/385 (37%), Gaps = 101/385 (26%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+L++ CCL G A E G +K + TY+ +V+V A A +MA +V++
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFG----YRPSAVTYNALVQVLASAGQVEMAFRVQK 228
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M ++G + T S A G A+ L E + + ++ C ++ +EA
Sbjct: 229 EMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLMEAS 285
Query: 448 QFDRA------------------FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
F+ A +R + L K Q+ G RI NM
Sbjct: 286 LFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQL-------GWCKRIINM------M 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+T N P+ + +N L+ C DY L N M T G P
Sbjct: 333 MTEGCN-----------------PSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375
Query: 548 HISWTILIDA-CG----------------------------------------GSGNVEG 566
++ + I I + CG G G E
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A QI+K M G PD YT I ++KR+ +AF LF+EMK + P++ TY L+
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G + + Q + + +M AG
Sbjct: 496 SFCKAGLIEQAQ---SWFDEMRSAG 517
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 167/424 (39%), Gaps = 106/424 (25%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMA 322
D ++S +E + ++ N+ + +L+N +AHDL M G
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL------LDAMLAAGCEP 641
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV-KVFADAKWWQM 381
+ Y+ L+ C G AQE++ + G L V TY++++ ++F D + +
Sbjct: 642 NQIVYDALVDGFCKVGEIDSAQEVF---LRMTKCGYLP-SVHTYTSLIDRMFKDGRL-DL 696
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+KV ML PN +T++++++ G E+A++L M + GC PN L+
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALID 756
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + D LF M+ K K PN+V
Sbjct: 757 GLGKAGKVDAGLELF-------------------------MQMKTKGC---APNYV---- 784
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-----------------------DYYRVK----- 533
TY IL+ CC YR
Sbjct: 785 ---------------TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFS 829
Query: 534 -------ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA- 585
L+ EM + +P + +LID+ +G +E AL++ K M E S ++ +
Sbjct: 830 KRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASK 889
Query: 586 --YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE-VQQCLA 642
+T+ I+ S ++++A +L+ EM+ I P+L ++ L++ +E +Q C
Sbjct: 890 DMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYG 949
Query: 643 VYQD 646
+ Q+
Sbjct: 950 ICQE 953
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A++ K +PN+ ++D G+C G+ K+ + + + + N+ + +L
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVD--GLCKTGETEKALNLLSLMEKKGCSPNVVTYTAL 754
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A + LE++ M+ G + +Y IL+ CC AG A + E+K
Sbjct: 755 IDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW 814
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L+ Y T V+ F+ K + +L + E+M S P + LI++ + AG +E
Sbjct: 815 PKYLQ----GYRTTVQGFS--KRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Query: 416 QAMHLFEEMLQAGCEPNSQCCNI---LLQACVEACQFDRAFRLF 456
A+ L +EM++ N ++ L+QA + Q + A L+
Sbjct: 869 TALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALY 912
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 134/359 (37%), Gaps = 60/359 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
PN + ++D G C G+ ++ ++ + +++ + SL++ D L +
Sbjct: 641 PNQIVYDALVD--GFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M K ++ +Y ++ C G T A + + +E KG +V TY+ +
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNL---LSLMEKKGC-SPNVVTYTAL 754
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A L++ M + G PN +T+ LIN C AGL++ A L +EM Q
Sbjct: 755 IDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQT-- 812
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + + +R+ T + + + + ME D
Sbjct: 813 ------------------HWPKYLQGYRT-----TVQGFSKRFLASLGLLEEMESHDTAP 849
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
I + + SF K + L EM V S N
Sbjct: 850 IAPVYGMLID----SFSKAGRLETALE------------------LHKEMMEVSSSLNMA 887
Query: 550 S---WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
S T LI A S VE A+ + MR G+ PD+ A+ +K + + +A L
Sbjct: 888 SKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 49/348 (14%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ D+ SYN L+ C GN + A ++ E++ + L + TY+T++
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI----YLFPTIVTYNTLLDGLCRQGEL 425
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
++A ++K +M++ G+ P+ +T++ L+N G + A F+EML G E +S
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD--------------GNTDRISNMEHK 485
+ ++ RAF +L + +A G D GN + S + K
Sbjct: 486 IVGELKLGDTSRAF------SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
S P++V TY ++ A + + + + EM + G
Sbjct: 540 -MVSDGVIPDYV-------------------TYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+P+ +++T+LI G G +E A M+E G+ P+V+ Y + I + +R+ QA+
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAY 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ F EM I PN +Y L+ G+ Q+ L++Y+ M G
Sbjct: 640 NFFAEMVEKGIFPNKYSYTILINENCNMGNW---QEALSLYKQMLDRG 684
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 26/335 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ MK+ ++++LRS + I +N+L++ +L+ ++ M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y IL+ C G+ +AQE + E+ H +G L+LD + Y+T ++ + K
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLH---EG-LELDSYAYAT--RIVGELKLGD 494
Query: 381 M--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++E+ML+ G P+ I ++ +++ G +E+A L ++M+ G P+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ A +E + + +F LSK G T + H K + F+
Sbjct: 555 IIHAHLENGRLRKGREIFYE-MLSK-----GLTPSVVTYTVLIHGHAGKGRLERA--FI- 605
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
++S ++ P TYN L+ C +A EM G+ PN S+TILI+
Sbjct: 606 --YFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GN + AL + K M + G+ PD ++ +K
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 45/284 (15%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K L DV + I+++ D A++V M G+ P +T+++L+++ G V+
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
Q + L EM + GC PN N+L+ + +F++A L + +V+
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS-------- 303
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
+ T P Y F+K +L +A +L
Sbjct: 304 -------------AYTYNPLI-----YGYFNK-----------GMLAEAL--------SL 326
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G SP ++ I G + A+Q L M + + PDVV+Y T I R
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L +AF LF+E++ + P +VTY TLL R G L QQ
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 150/358 (41%), Gaps = 29/358 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L V+ M K + D+ + N +L+ L ++++ + EV + +K + TY+T
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILR--ILRDKDLMSKAV--EVYRTMGEFGIKPTIVTYNT 239
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + Q L + +M G PN +T++ LIN + G EQA L EML+ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTL--SKTQVALGEDYDGNTDRISNMEHKD 486
+ ++ N L+ A L L + VA + ++ M
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 487 KQ-SITNTPNFVPN------------------SHYSSFDKRFSFK--PTTTTYNILMKAC 525
+Q S N +P+ + FD+ S PT TYN L+
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + L EM G++P+ +++TIL++ G++ A + M +G+ D
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
AY T I ++ +AFSL EEM P+L+ Y ++ + G+L E + L
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 242 RAYDASKKHLSS---PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+ ++ L+ P++ I ++D G+C G+ ++ + + + S V + + S
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVD--GLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 297 LMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ + + L+ E++ M G+ + +Y +L+ G A + E ++
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE---MQ 611
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG+L +V TY++++ + A +M+ G+ PN +++ LIN N G
Sbjct: 612 EKGILP-NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
++A+ L+++ML G +P+S + LL+ + C+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 49/241 (20%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI + +VEQ + +F++M+++ P+ + CN +L+ + +A ++R+
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT----- 224
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+GE F KPT TYN L+
Sbjct: 225 ----MGE--------------------------------------FGIKPTIVTYNTLLD 242
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ C + L ++EM+ G +PN +++ +LI+ G E A ++ M + G+
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y I L +A SL EEM P + TY + + + G + + Q L
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 642 A 642
+
Sbjct: 363 S 363
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE L + M + +SPDV +++ + +A ++ M + I+P +VTY T
Sbjct: 180 VEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LL + + G +VQQ L + +M + G
Sbjct: 240 LLDSYCKGG---KVQQGLDLLSEMQRRG 264
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 146/341 (42%), Gaps = 56/341 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ M+ +GV ++ Y IL++ACC G+ A+ ++ + L L + + Y+
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG----LAANQYIYTI 182
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ + M GV PN T++SLI G + A +F+E+ + G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ NIL+ Q +A +G +R+
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKA--------------------EGLLERM--------- 273
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
KR PTT T+N+LM C KAL + +++ +GL P
Sbjct: 274 ------------------KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ ILI GN ++++ M + G+SP V YT + VRS +++A+ +F
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK + P+ TY L+ G++ E + +Y+ M
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASK---LYKSM 413
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 174/418 (41%), Gaps = 52/418 (12%)
Query: 257 YICRTIIDV--CGIC-------GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDL 305
Y+ RT DV GI G+ K + + + V+ N++++ L+ D+
Sbjct: 99 YLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDI 158
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++ M LG+ A+ Y I++ G E+Y ++K + GVL +++T
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLV---GVLP-NLYT 214
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ + +A KV +++ GV N +T++ LI G V +A L E M
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK 274
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTD 477
+A P ++ N+L+ Q D+A L L G GN+
Sbjct: 275 RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334
Query: 478 RISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVK 533
+S + E +D+ P+ TY ILM D +
Sbjct: 335 VVSELVREMEDR----------------------GISPSKVTYTILMNTFVRSDDIEKAY 372
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + M+ +GL P+ ++ +LI GN+ A ++ K M E + P+ V Y T I
Sbjct: 373 EMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGY 432
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A EEM + PN+ +YI+ ++ + G E ++ L ++M +AG
Sbjct: 433 CKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL---KEMTEAG 487
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + ++ + + LMN V + D++ E++ M+++G++ D +Y +L+ C+ G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 339 NTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N V A ++Y + HL+ V+ Y+T++ + ALK E+M+ GVTP
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVI------YNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
N ++ S I G +A L +EM +AG +P C+ + QA
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++INA + L+EQ++ F+ M+ G P+S N L ++ DR + F + L
Sbjct: 43 AVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LG 101
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+TQ FD ++ I +
Sbjct: 102 RTQ---------------------------------------FD--------VYSFGITI 114
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA C + K L+ +M T+G+SPN +TILI+AC +G+++ A + M + G++
Sbjct: 115 KAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLA 174
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ YT I + K F L+++MK + PNL TY +L+ R G L
Sbjct: 175 ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL---SLA 231
Query: 641 LAVYQDMWKAG 651
V+ ++ K G
Sbjct: 232 FKVFDEISKRG 242
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 28/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
S P Y T+I G G + + + E LR + ++ FNS++ K L
Sbjct: 49 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 108
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ M+K + ++YNI++ CL G A I E++H L ++ T + +
Sbjct: 109 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH----ASLFPNLLTVNIM 163
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V A+ + A K+ E G P+ +T+ SLI+ G V++A LFE+ML AG
Sbjct: 164 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 223
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVALGEDYDGNTDRISNMEHKDK 487
N L++ + + ++F+ K + L Y + +E K +
Sbjct: 224 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE-KGR 282
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ + + F P +Y+IL+ + + M+ G +
Sbjct: 283 MIFEDI-------------RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ ++ ++D SG V A +IL+ M+E + P V Y + + RL +A+ L
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
FEE K I+ N+V Y +L+ +G + + + + ++M K G
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDG---FGKVGRIDEAYLILEEMMKKG 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 171/433 (39%), Gaps = 65/433 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDA--SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+ +C+ + GKK + A R ++ H ++P +Y ++I I G I+
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT--SLIRNFFIHGRKEDGHKIF 250
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++L + ++ + N+ M+ A +++ ++++++ G + D+ SY+IL+ A
Sbjct: 251 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 310
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G I+ H + LD Y+ +V F + A ++ E+M V P
Sbjct: 311 GQARETSNIF----HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+ ++++ A +++A LFEE G E N + L+ + + D A+ +
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI-- 424
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+E K+ +T P T
Sbjct: 425 ------------------------LEEMMKKGLT---------------------PNVYT 439
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N L+ A +AL+ M+ + PN +++ILI+ A + M+
Sbjct: 440 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV YTT I + + A+SLFE K P+ ++ L+ S
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN----- 554
Query: 636 EVQQCLAVYQDMW 648
+ + YQ W
Sbjct: 555 -ANRAMEAYQAGW 566
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 161/386 (41%), Gaps = 32/386 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +L++Q + + + S++ V A L E++ M+ + +YN ++
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG ++ Y ++ L +G + V ++++I+ + AL + E ++
Sbjct: 65 SAGRF---EDAYKLLERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAE 119
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN+ T++ +I+ G VE+A + +EM A PN NI++ +A + + A+++
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Query: 456 FRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF-- 505
F S + ++ + G G D + K + N V S +F
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239
Query: 506 -----DKRFSF--------KPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHIS 550
D F KP T N M + + + + ++R+ G P+ S
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ILI +G I M++ G + D AY + +S ++ +A+ + EEMK
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHE 636
+QP + TY ++ ++ L E
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDE 385
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V F K + A + K+ P + I+D ++ ++E+ +S+ +
Sbjct: 339 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 398
Query: 288 TLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
LN+ +++SL++ V D + + + M K G+ ++ ++N LL A V A
Sbjct: 399 ELNVVLYSSLIDGFGKVGRIDEAYL--ILEEMMKKGLTPNVYTWNSLLDA------LVKA 450
Query: 344 QEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+EI + ++ +K + +TYS ++ + + A +DM G+ PN +T+
Sbjct: 451 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 510
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+++I+ A G + A LFE G P++ N L++ A +RA +++ L
Sbjct: 511 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA---NRAMEAYQAGWL 567
Query: 462 SKT 464
T
Sbjct: 568 DTT 570
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP +Y ++ C + L +M P ++ +I G +G E A
Sbjct: 13 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++L+ +RE G P VV++ + + + +++ +A SLFE MK +PN TY ++
Sbjct: 73 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 131
Query: 628 RSRYGSLHEVQQCL 641
G + E + L
Sbjct: 132 LCLGGRVEEAYRIL 145
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 212/482 (43%), Gaps = 57/482 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 127
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 128 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 179
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 180 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 235
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 236 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 486 DKQSIT---NTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 474
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ +
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Query: 646 DM 647
D+
Sbjct: 535 DL 536
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 178/405 (43%), Gaps = 28/405 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 374
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLS-KTQVALGE-DYDGNTDRISNMEHKDKQ 488
P N LL+ FD A ++ W L K VA E Y D + ME+ +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQI---WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 491
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
S + + R F + T+N ++ C V+A + ++M+ +G SP
Sbjct: 492 S----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + PN+VTY L+ + G L + + Y +M + G
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENG 642
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 185/436 (42%), Gaps = 31/436 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+++ Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 576 SIEM----YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYD 473
+ EM + G N C+ ++ + D A L + + L D
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691
Query: 474 -GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--------RF-------SFKPTTTT 517
+I++ + ++ N V N + K RF F P T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ + + L +EM GL PN +++ LI+ S NV+ A ++ +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV Y T I + + AF L ++M I P++VTY L+ ++G
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG--- 868
Query: 636 EVQQCLAVYQDMWKAG 651
++++ + + M KAG
Sbjct: 869 DIERSMKLLNQMIKAG 884
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 181/456 (39%), Gaps = 80/456 (17%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL +D K P++ C ++++ G+ + +Y+ + + ++++ + ++
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N D K K M+ LGV ++ +Y+ L+ G+ A+ G +K + K
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK---GVLKFMSEK 290
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINACANAGLVE 415
GV + +V TY+ ++K + A KV M A + P+ + LI+ G ++
Sbjct: 291 GVSR-NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 349
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTL---SKTQVALG 469
A+ L +EML+ G + N CN L+ + + A + W L S + L
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409
Query: 470 EDY--DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ Y +G+T N+ K Q +PT TYN L+K C
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQE--------------------GIEPTVLTYNTLLKGLC- 448
Query: 528 DYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL------------- 568
RV A + + M G++P+ + ++ L+D N EGA
Sbjct: 449 ---RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505
Query: 569 ----------------------QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+I M++ G SPD + Y T I ++ + QAF +
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 565
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
M+ I P++ Y +L+ + L EV L
Sbjct: 566 GAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 171/438 (39%), Gaps = 49/438 (11%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-----GDYM 273
++ I F + K +V A +D K SP+ RT+ID G C G
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID--GYCKASNVGQAF 562
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K + E + ++ +I ++NSL++ + L ++ M G+ ++ +Y L+
Sbjct: 563 KVKGAME---REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A Y E+ + L ++ ST+V A + + M+
Sbjct: 620 DGWCKEGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G P+ + + +++ +E + PN+ NI + + + D
Sbjct: 676 HGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 452 AFRLFRSWTLSK------TQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A R F +L T L Y GN D + +D+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL--RDEML-------------- 776
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
R P TYN L+ C + R + L +++ GL PN +++ LID
Sbjct: 777 ----RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN++ A ++ M E+G+SP VV Y+ I + ++++ L +M + L+ Y
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Query: 622 ITLLRARSRYGSLHEVQQ 639
TL++ R G + ++ +
Sbjct: 893 CTLVQGYIRSGEMQKIHK 910
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 189 KELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
K +D F C K D IRYA I AD L D S
Sbjct: 672 KMVDHGFFPDHECFLKSD----IRYAAIQKIADSL---------------------DESC 706
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K PN + I + G+C G +R + L + + + + +L++ A +
Sbjct: 707 KTFLLPNNIVYN--IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + M + G++ ++ +YN L+ C + N AQ ++ + L KG+ +V
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK---LHQKGLFP-NVV 820
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A K+K+ M+ G++P+ +T+S+LIN G +E++M L +M
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++AG + L+Q + + + + +L+
Sbjct: 881 IKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 50/224 (22%)
Query: 389 MLS-AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
MLS G P+ T+ +LI+ + AG V++A L +EML+ G PN N L+ ++
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 798
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRA RLF HK Q
Sbjct: 799 NVDRAQRLF---------------------------HKLHQK------------------ 813
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYN L+ C + L ++M G+SP+ ++++ LI+ G++E
Sbjct: 814 --GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++++L M + G+ ++ Y T ++ +RS +++ L++ M
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 166/406 (40%), Gaps = 52/406 (12%)
Query: 267 GICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADM 324
G+C + AI + L++ N+ FNSLMN A + E++ M++ G AD+
Sbjct: 287 GLCQAHRLEEAI-QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YNILLK C E Y V+ + +V T+ST+++ +A A +
Sbjct: 346 ITYNILLKGLC---KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWE 402
Query: 385 VKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--------------- 428
V E M++ G++PN T++ L+ AG + FE+ML+
Sbjct: 403 VYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVD 462
Query: 429 ------CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG--NTD 477
C P N L+ ++ A L LS + DG
Sbjct: 463 FLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQ 522
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
RI + + K+++ +P TY+ L+ +AL
Sbjct: 523 RILDAHNVFKRALER-----------------GCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M +G N ++++ ++D G +E A+ +L+ MR+ G PD V Y T I +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+RL++A L EM P++VTY TL R G E + L
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 170/419 (40%), Gaps = 73/419 (17%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
V K +L A +D+ + SPN +ID G+C A+ LR +N
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALID--GLCKAGKLDIALGL-LRDKNS 274
Query: 288 TLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ F+SL++ AH L+ +++ K M + ++ +N L+ C A A E
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFE 331
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-SAGVTPNTITWSSL 404
++ +K DV TY+ ++K + A + E M + G +PN +T+S+L
Sbjct: 332 LFDVMKESGCSA----DVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 405 INACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
I NAG V QA ++E M+ G PN LL+ +A R + F
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE------ 441
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
M ++ +S ++ P P + +PT TYN L+
Sbjct: 442 -----------------QMLEREWRSSSSWPIHSPEVDFLMVQ---VCRPTLVTYNTLV- 480
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
GLS SG V AL +L+ M E G+SPDV
Sbjct: 481 ------------------TGLSK--------------SGMVRDALGLLEFMIESGLSPDV 508
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ + + + + +R+ A ++F+ +PN+VTY TL+ S+ + E Q LA
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 567
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 123/314 (39%), Gaps = 55/314 (17%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
M +YN+L+ C AG A + + + V TYST++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFG----FRPTVVTYSTVIDGLCRDNEVDKGC 56
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
K+ E+M G PN +T+++L+NA G ++A L E M GC P ++++
Sbjct: 57 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGL 116
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ + + AFR+ D DR
Sbjct: 117 CKEGEIEAAFRVV----------------DEMVDR------------------------- 135
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGG 560
F P + +L+ A C + RV ++ +G +P+ +++ ++D
Sbjct: 136 ------GFVPDVEIHTVLLHALC-ELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK 188
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E A +L+++ E SP V +T A+ ++ L A+ F+ M + PN VT
Sbjct: 189 AGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVT 248
Query: 621 YITLLRARSRYGSL 634
Y L+ + G L
Sbjct: 249 YDALIDGLCKAGKL 262
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 141/327 (43%), Gaps = 31/327 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E+ M G + +Y+ ++ C AG E G + + V+ V YS
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVT---EALGYFEKMARDEVVAPHVIAYSA 724
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A A + E M+ AG P+ +T+S LIN +AG ++ + LF M + G
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALG---EDYDGNTDRISNM 482
C+ + N ++ A +F A+ L ++ ++K V G + GN DRI
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN-DRIDEA 843
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
V H D R +YN L+ + +A L+ M
Sbjct: 844 --------------VSYFHSIPEDCR-----DEISYNTLITSLVASRRSEQALELLRAMV 884
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G SP+ ++ ++D +G+ E A ++L+ MR G SPD+ YT I ++K+L
Sbjct: 885 ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRA 627
A FEEM ++P+ + Y +L+ A
Sbjct: 945 LACDYFEEMLRKNLKPDAIVYSSLIDA 971
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 26/342 (7%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+++ V M G + D+ + +LL A C G A + +V + D
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG----FTPDA 176
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T+V A + A V + + + +P T++ ++ + AG + A F+
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M Q G PN+ + L+ +A + D A L R A G
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQ-----A 291
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
H+ +++I K P +N LM C +A L + M+
Sbjct: 292 HRLEEAI-------------QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLK 600
G S + I++ IL+ + A + +++MR +G SP+VV ++T I+ + R+
Sbjct: 339 SGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVN 398
Query: 601 QAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCL 641
QA+ ++E M + I PN TY LL + G ++QC
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCF 440
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 176/411 (42%), Gaps = 38/411 (9%)
Query: 253 SPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--T 308
SP++ +++D G+C + + + +++ + N+ +++L++ + K
Sbjct: 505 SPDVITFNSVLD--GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ M +LG A+ +Y+ ++ G A + ++ + G L D TY+T
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV---LRQMRDAGCLP-DAVTYNT 618
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + A+ + +ML AG P+ +T+++L + +G ++A+ + + M G
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF----RSWTLSKTQVALGEDYDG--NTDRISNM 482
C PN+ + ++ +A + A F R ++ +A DG RI
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738
Query: 483 EHKDKQSI--TNTPNFVPNS-------HYSSFDKRFSF---------KPTTTTYNILMKA 524
++ I P+ V S D K YN ++ A
Sbjct: 739 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINA 798
Query: 525 CC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C ++ AL+ EM+T G++ N ++ I+I A G+ ++ A+ + ED D
Sbjct: 799 YCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRD 856
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
++Y T I V S+R +QA L M P+ Y+T++ + GS
Sbjct: 857 EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGS 907
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 171/399 (42%), Gaps = 46/399 (11%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKF 307
+PN +I+D G+C G ++ +E + R + V ++ +++L++ A +
Sbjct: 680 APNAITYSSIVD--GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
E + M + G + D+ +++IL+ C AG E++ + A+ K D++ Y+
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM----AERGCKADIYAYN 793
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + A + E+M + G+ NT+T +I A +++A+ F + +
Sbjct: 794 AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+ S N L+ + V + + ++A L R+ VA G G+ D + M D
Sbjct: 854 CRDEISY--NTLITSLVASRRSEQALELLRA------MVADG----GSPDACNYMTVMDG 901
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK----------ACCTDYYRVKALMN 537
+P + S P TY I++ AC DY+
Sbjct: 902 LFKAGSPEVAAKLLQEMRSRGHS--PDLRTYTIMISGLSKAKQLPLAC--DYF------E 951
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM L P+ I ++ LIDA + V+ A K++R G+ P + Y+T + +++
Sbjct: 952 EMLRKNLKPDAIVYSSLIDAFCKADKVDDAW---KLLRSSGIEPTITMYSTMVDSLCKNR 1008
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+A + EMK +P + + +L A G + E
Sbjct: 1009 GTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDE 1047
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 149/375 (39%), Gaps = 61/375 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M G + +YN L+ A G A+E + ++ + A G ++ T+ I
Sbjct: 57 KLLEEMAGRGCAPNAVTYNTLVNALLGQGR---AKEAFSLLERMAANGCPP-ELITFGLI 112
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K + A +V ++M+ G P+ + L++A G V++A F+++L G
Sbjct: 113 IKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGF 172
Query: 430 EPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
P++ N ++ +A + + A +L S T DG
Sbjct: 173 TPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDG------------ 220
Query: 487 KQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT----------------- 527
++ N Y FD + P T TY+ L+ C
Sbjct: 221 ---LSKAGNL--TGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ 275
Query: 528 --------------DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+R++ + ++ + PN + + L++ + V+ A ++ +
Sbjct: 276 AGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDV 335
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ-IQPNLVTYITLLRARSRYG 632
M+E G S DV+ Y +K + +R+ +A+ E M+ + PN+VT+ TL++ G
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Query: 633 SLHEVQQCLAVYQDM 647
V Q VY+ M
Sbjct: 396 ---RVNQAWEVYERM 407
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 502 YSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+++F K +F F+PT TY+ ++ C D K L+ EM G +PN +++ L++A
Sbjct: 21 FTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 80
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G G + A +L+ M +G P+++ + IK + ++ AF + +EM P+
Sbjct: 81 LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140
Query: 618 LVTYITLLRARSRYGSLHE 636
+ + LL A G + E
Sbjct: 141 VEIHTVLLHALCELGRVDE 159
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
RA+ D S + + V + L + ++ L + M+ G D+ +Y I++
Sbjct: 881 RAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL--LQEMRSRGHSPDLRTYTIMISGLS 938
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A LA + + E+ + LK D YS+++ F A A K+ + S+G+
Sbjct: 939 KAKQLPLACDYFEEM----LRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIE 991
Query: 396 PNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P +S+++++ C N G ++A+ + EM CEP L A V + D A +
Sbjct: 992 PTITMYSTMVDSLCKNRG-TDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050
Query: 455 L 455
L
Sbjct: 1051 L 1051
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 146/357 (40%), Gaps = 29/357 (8%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y+ + L K GR++E +E ++ + +++ ++ +G+ + GRID +
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMI----RAGRIPDVVTFSILINGLCDA---GRIDTGL 774
Query: 134 GVLKKLNELGV-APLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
+ + E G A + ++ ++ C + GE L+E ++ + +
Sbjct: 775 ELFCGMAERGCKADIYAYNA----MINAYCLK----GEFSAAYALLEEMKTHGIAKNTVT 826
Query: 193 EEFRIVQLCVNKPDVNLAIRYACIVP---RADILFCNFVREFGKKRDLVSALRAYDASKK 249
I LC N ++ A+ Y +P R +I + + R AL A
Sbjct: 827 HGIVIKALCGND-RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVA 885
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
SP+ T++D G + + +++RS+ + ++ + +++ A L
Sbjct: 886 DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPL 945
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ ++ M + + D Y+ L+ A C A ++ K L + G+ + + YS
Sbjct: 946 ACDYFEEMLRKNLKPDAIVYSSLIDAFCKA------DKVDDAWKLLRSSGI-EPTITMYS 998
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+V + AL+V +M S P W+SL A G V++A+ L ++
Sbjct: 999 TMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ +LI+ +G V A + + G P VV Y+T I R + + L EE
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
M PN VTY TL+ A G E
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKE 89
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 178/408 (43%), Gaps = 50/408 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN------VNAHDLKFTLEV----------YKNMQKLGVMADMA 325
++SQ++ +IY FN +++ N + T V + N K+ V+ D+
Sbjct: 105 VQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVY 164
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
S+ I++K CC AG + ++ E++ +V Y+T++ + A +
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFG----FSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+M G+ N T++ LI+ G+ +Q ++E+M + G PN N ++ +
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCK 280
Query: 446 ACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--S 500
+ AF++F R +S V G + E + + PN +
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLIT 340
Query: 501 HYSSFD------------------KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMR 540
+ + D K P+ TYNIL+ C D ++ EM
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRL 599
G+ P+ +++TILID S N+E A+Q+ M E G++PDV Y+ I C++ R+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG-RM 459
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+A LF+ M + +PN V Y T++ + GS + + L ++++M
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY---RALRLFREM 504
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 167/401 (41%), Gaps = 71/401 (17%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A +V + M S G+ PN IT+++
Sbjct: 288 FKVFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLS 462
LI+ + +A+ L ++ G P+ NIL+ C +
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG---------------- 387
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
D G + ME + KP+ TY IL+
Sbjct: 388 --------DTSGAGKVVKEMEER------------------------GIKPSKVTYTILI 415
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA L + M +GL+P+ ++++LI G + A ++ K M E
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
P+ V Y T + + +A LF EM+ ++ PN+ +Y
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 53/253 (20%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +INA + ++ +++ F EM+ G P S C N LL V + F++ + F
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
SK +V L ++ I
Sbjct: 155 -SKIKVVL---------------------------------------------DVYSFGI 168
Query: 521 LMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++K CC + + L+ E+R G SPN + +T LID C G +E A + M + G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ + YT I ++ KQ F ++E+M+ + + PNL TY ++ + G +
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDG---RTK 285
Query: 639 QCLAVYQDMWKAG 651
V+ +M + G
Sbjct: 286 DAFKVFDEMRERG 298
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 194/450 (43%), Gaps = 67/450 (14%)
Query: 197 IVQLC--VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR-AYDASKKHLSS 253
++ LC +NK D + ++Y I+ + L + R FG LV ++ Y +
Sbjct: 162 VLDLCRKMNK-DESFELKYKLIIGCYNTLLNSLAR-FG----LVDEMKQVYMEMLEDKVC 215
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTL 309
PN+Y +++ G C G+ ++ + + + + + SL+ DL
Sbjct: 216 PNIYTYNKMVN--GYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+K M G + +Y L+ C+ A +++ ++K + ++ TY+ +
Sbjct: 274 KVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVR----TYTVL 329
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K ++ AL + ++M G+ PN T++ LI++ + +E+A L +ML+ G
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ + + A D + ME ++
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAL-----------------------DVVELMESRN--- 423
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMNEMRTVGLSPNH 548
+P T TYN L+K C + ++ ++N+M + P+
Sbjct: 424 ---------------------LRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDV 462
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LID SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
++ + PN+V Y L+ + G ++E
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 160/373 (42%), Gaps = 43/373 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + AL V E M S + PNT T++ LI V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E KD PN V N + +K S P + T+N
Sbjct: 518 DLFDSLEQKDV-----IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ CTD +A L +M + L P + TILI G+ + A + + M G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL+ A + +MK + P+L TY +L++ YG L
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG---YGDLGRTN 689
Query: 639 QCLAVYQDMWKAG 651
V + M G
Sbjct: 690 SAFVVLKRMHDTG 702
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 21/305 (6%)
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKE 387
+++K+C +T+ ++ ++ E+ + KL + Y+T++ A +V
Sbjct: 148 LMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML V PN T++ ++N G VE+A +++AG +P+ L+ +
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 448 QFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
D AF++F+ L + +VA G +E + +++ + Y
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC-----VERRIDEAMDLFVKMKDDDCY-- 320
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
PT TY +L+KA C + +A L+ EM G+ PN ++T+LID+
Sbjct: 321 --------PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC 372
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A ++L M E G+ P+V+ Y I + ++ A + E M+ ++PN TY
Sbjct: 373 KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYN 432
Query: 623 TLLRA 627
L++
Sbjct: 433 ELIKG 437
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 166/406 (40%), Gaps = 66/406 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN----VNAHDLKF 307
PN+ +I+ G C M A + E + S+N+ N +N L+ N H
Sbjct: 391 PNVITYNALIN--GYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK--- 445
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ V M + V+ D+ +YN L+ C +GN A Y + + +G++ D +TY+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVP-DPWTYT 501
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ +K + A + + + V PN + +++LI+ AG V +A + E+ML
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
C PNS N L+ G DG + +E K
Sbjct: 562 NCLPNSLTFNALIH---------------------------GLCTDGKLKEATLLEEKMV 594
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLS 545
+ +PT +T IL+ D + +M + G
Sbjct: 595 --------------------KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK 634
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++T I G ++ A ++ M+E+G+SPD+ Y++ IK R AF +
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVV 694
Query: 606 FEEMKHYQIQPNLVTYITLLRA--RSRYGSLHEVQQCLAVYQDMWK 649
+ M +P+ T+++L++ +YG + + + V +M +
Sbjct: 695 LKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMME 740
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 156/428 (36%), Gaps = 78/428 (18%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ + + K + + A +D+ ++ PN+ + +ID G C G ++ + E
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID--GYCKAGKVNEAHLMLEK 557
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+N N FN+L++ D LK + + M K+ + +++ IL+ G+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Y + + + G K D TY+T ++ + Q A + M GV+P+
Sbjct: 618 ---FDHAYRRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLF 673
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE------------AC 447
T+SSLI + G A + + M GCEP+ L++ +E C
Sbjct: 674 TYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVC 733
Query: 448 ------QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF-VPNS 500
+FD L G T + E K I N V
Sbjct: 734 VMSNMMEFDIVVELLEKMV-----------EHGVTPNAKSYE-KLMLGICEIGNLRVAEK 781
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP------------ 546
+ ++ P+ +N L+ CC + ++++M VG P
Sbjct: 782 VFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841
Query: 547 -----------------------NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ ++W I+ID G G VE ++ +M ++G +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSS 901
Query: 584 VAYTTAIK 591
Y+ I+
Sbjct: 902 QTYSLLIE 909
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ Y S P TY L+ C D + EM G N +++T LI
Sbjct: 238 NQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHG 297
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A+ + M++D P V YT IK S+R +A +L +EM+ I+PN
Sbjct: 298 LCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPN 357
Query: 618 LVTYITLLRARSRYGSLHEVQQCLA 642
+ TY L+ + L + ++ L
Sbjct: 358 IHTYTVLIDSLCSQCKLEKARELLG 382
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 55/391 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF----NSLMNVNAHDLKFTL 309
P + T+ID K+ +E+L+ + + + + N L N + DL+
Sbjct: 300 PTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRLAF 359
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ ++ D YN LL AC AG+ ++ E+K ++ ++LD TY+T
Sbjct: 360 QLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQS---IQLDEITYNT- 414
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
LI C + +A+ LFEEM Q G
Sbjct: 415 ----------------------------------LIKGCGRKKRLNEAISLFEEMKQIGI 440
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME--HKDK 487
+PN N LL +CV+ + + A+R F + Q + D + ++ ++ H ++
Sbjct: 441 KPNRISFNSLLDSCVKCNKMNVAWRYFEEM---RKQYGIFPDNFTYSILVNGIKTNHSNR 497
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLS 545
+ + + FKP YN L+ AC + + L EM+ +
Sbjct: 498 DELLRAITLL-----EQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIE 552
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ +++ ILI A G ++ GA ++ + M++ + + V Y + CVR+ RL QA
Sbjct: 553 PSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQF 612
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
E+MK + N V Y T+++ + E
Sbjct: 613 IEQMKSQNLPINTVLYTTIIKGFCKLNQTEE 643
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/452 (18%), Positives = 175/452 (38%), Gaps = 71/452 (15%)
Query: 201 CVNKPDVNLA------IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
C+N D+N ++ + + +I + ++ G+K+ L A+ ++ K+ P
Sbjct: 383 CINAGDLNRGFQLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKP 442
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQ------NVTLNIYVFNSLMN-VNAHDLKF 307
N +++D C C + +E++R Q N T +I V N N +L
Sbjct: 443 NRISFNSLLDSCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLR 502
Query: 308 TLEVYKNMQKLGVM-ADMASYNILLKACCLAGNTVLAQEIYGEVKH--LEAKGVLKLDVF 364
+ + + +Q+ G D YN L+ AC +++ E+K+ +E V
Sbjct: 503 AITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSV------ 556
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY ++K + A ++ E+M + N +T+ L++AC ++QA+ E+M
Sbjct: 557 TYGILIKAYGKMNDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQM 616
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
N+ +++ + Q + A + F
Sbjct: 617 KSQNLPINTVLYTTIIKGFCKLNQTEEAMKYFSLM------------------------- 651
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
KQ+ PN + TYN L+ + +A L E+
Sbjct: 652 --KQNQRTYPNLI-------------------TYNSLLDGLVKNGLMNQADKLFQELVES 690
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ I+++ L+ GN++ + ++ M ++PD ++ C+ ++
Sbjct: 691 TIKPDLITFSTLLKGHCRRGNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYHNG 750
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++++ +H QI + + ++R S+ L
Sbjct: 751 VQIYDQFQH-QIPQSTQLLLIIIRLHSQDKQL 781
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 41/387 (10%)
Query: 262 IIDVCGIC-GDYMKSRAIYEDLRSQ-NVTLNIYVFNSL-MNVNAHDLKFTLEV-YKNMQK 317
+I C C + +K +++LR LN ++SL M++ DL F V Y+ M+
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G + M Y ++ A C G T A+ ++ + LD ++++ F
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIG----FVLDSHIGTSLLLGFCRGL 244
Query: 378 WWQMALKVKEDMLSAGVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ ALKV D++S VT PN++++S LI+ G +E+A L ++M + GC+P+++
Sbjct: 245 NLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 436 CNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+L++A + D+AF LF + + T + G DG + + + K
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ D+ F P+ TYN L+ C D V A L+ M
Sbjct: 364 K-----------------DRIF---PSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ G A+ +LK M ++G+SPD+V+Y I R + A+ L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
M + I+P+ +T+ ++ A + G
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQG 490
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 164/402 (40%), Gaps = 61/402 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D PN++ +ID G+C G ++ + + + ++ +N+L
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 298 MNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N D + E+ M+K ++ ++N L++ C G A + +K +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL---LKRMLD 434
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L D+ +Y+ ++ A K+ M + P+ +T++++INA G +
Sbjct: 435 NG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A ML+ G + L+ C+ + KT+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDG---VCK------------VGKTR---------- 528
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-- 533
D + +E K I TP+ ++L K C +VK
Sbjct: 529 -DALFILETLVKMRILTTPH-----------------SLNVILDMLSKGC-----KVKEE 565
Query: 534 -ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A++ ++ +GL P+ +++T L+D SG++ G+ +IL++M+ G P+V YT I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ R+++A L M+ + PN VTY +++ G L
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 142/374 (37%), Gaps = 63/374 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G +Y +L+KA C G L + + + +G K +V TY+ ++
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRG---LIDKAFNLFDEMIPRGC-KPNVHTYTVLIDGLC 347
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A V M+ + P+ IT+++LIN G V A L M + C+PN +
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 435 CCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L++ + +A L + LS V+ Y+ D + H
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS----YNVLIDGLCREGHM------ 457
Query: 492 NTPNFVPNSHYSSFDKR--FSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPN 547
N+ Y F +P T+ ++ A C A + M G+S +
Sbjct: 458 -------NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 548 HISWTILIDACGGSGNVEGALQILKIM-------------------------RED----- 577
++ T LID G AL IL+ + +E+
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 578 -----GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G+ P VV YTT + +RS + +F + E MK PN+ Y ++ ++G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 633 SLHEVQQCLAVYQD 646
+ E ++ L+ QD
Sbjct: 631 RVEEAEKLLSAMQD 644
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 128/317 (40%), Gaps = 28/317 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ FN LM + + K M G+ D+ SYN+L+ C G+ A ++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + ++ D T++ I+ F +A ML G++ + +T ++LI+
Sbjct: 465 SSMNCFD----IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
G A+ + E +++ N++L + C+ + L +
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V DG + + + + K P Y I++
Sbjct: 581 VVTYTTLVDG---------------LIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + RV+ L++ M+ G+SPNH+++T+++ +G ++ AL+ ++ M E G
Sbjct: 626 LC-QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 582 DVVAYTTAIKVCVRSKR 598
+ Y++ ++ V S++
Sbjct: 685 NDRIYSSLLQGFVLSQK 701
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ V +PN +S++ILI G +E A + M E G P YT IK +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+AF+LF+EM +PN+ TY L+ R G + E
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDAC 558
+ K + P + +Y+IL+ C + R++ L ++M G P+ ++T+LI A
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLC-EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A + M G P+V YT I R ++++A + +M +I P++
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQ 645
+TY L+ + G + + L V +
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVME 398
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ 316
T+ID G+C G + I E L + + N ++++ +K L + +
Sbjct: 516 TLID--GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL-----DVFTYSTIVK 371
KLG++ + +Y L+ +G +I G + LE ++KL +V+ Y+ I+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSG------DITGSFRILE---LMKLSGCLPNVYPYTIIIN 624
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ M +GV+PN +T++ ++ N G +++A+ M++ G E
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 432 NSQCCNILLQACV 444
N + + LLQ V
Sbjct: 685 NDRIYSSLLQGFV 697
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 146/341 (42%), Gaps = 56/341 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ M+ +GV ++ Y IL++ACC G+ A+ ++ + L L + + Y+
Sbjct: 127 FELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG----LAANQYIYTI 182
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + + ++ + M GV PN T++SLI G + A +F+E+ + G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ NIL+ Q +A +G +R+
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKA--------------------EGLLERM--------- 273
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
KR PTT T+N+LM C KAL + +++ +GL P
Sbjct: 274 ------------------KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+++ ILI GN ++++ M + G+SP V YT + VRS +++A+ +F
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMF 375
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
MK + P+ TY L+ G++ E + +Y+ M
Sbjct: 376 HLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASK---LYKSM 413
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 171/405 (42%), Gaps = 62/405 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN++I +I+ C GD +++ ++ + + N Y++ ++N K E
Sbjct: 139 SPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFE 198
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ M+ +GV+ ++ +YN L+ C G LA +++ E+ +K + + TY+ ++
Sbjct: 199 LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI----SKRGVACNAVTYNILI 254
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + E M A + P T T++ L++ N G +++A+ E++ G
Sbjct: 255 GGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLC 314
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDKQ 488
P NIL+ SK GN+ +S + E +D+
Sbjct: 315 PTLVTYNILISG------------------FSKV---------GNSSVVSELVREMEDR- 346
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
P+ TY ILM D + + + M+ +GL P
Sbjct: 347 ---------------------GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP 385
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ +LI GN+ A ++ K M E + P+ V Y T I + +A
Sbjct: 386 DQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFL 445
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EEM + PN+ +YI+ ++ + G E ++ L ++M +AG
Sbjct: 446 EEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL---KEMTEAG 487
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 40/396 (10%)
Query: 257 YICRTIIDVC-------GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDL 305
Y+ RT DV C G+ K + + + V+ N++++ L+ D+
Sbjct: 99 YLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDI 158
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
++ M LG+ A+ Y I++ G E+Y ++K + GVL +++T
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLV---GVLP-NLYT 214
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ + +A KV +++ GV N +T++ LI G V +A L E M
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK 274
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTD 477
+A P ++ N+L+ Q D+A L L G GN+
Sbjct: 275 RAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS 334
Query: 478 RISN----MEHKDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILM 522
+S ME + T + N+ S D KR P TY +L+
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C V+A L M + L PN + + +I+ N AL+ L+ M ++G++
Sbjct: 395 HGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVT 454
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
P+V +Y + I++ + + +A L +EM ++P
Sbjct: 455 PNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + ++ + + LMN V + D++ E++ M+++G++ D +Y +L+ C+ G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 339 NTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N V A ++Y + HL+ V+ Y+T++ + ALK E+M+ GVTP
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVI------YNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
N ++ S I G +A L +EM +AG +P C+ + QA
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++INA + L+EQ++ F+ M+ G P+S N L ++ DR + F + L
Sbjct: 43 AVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LG 101
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+TQ FD ++ I +
Sbjct: 102 RTQ---------------------------------------FD--------VYSFWITI 114
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA C + K L+ +M T+G+SPN +TILI+AC +G+++ A + M + G++
Sbjct: 115 KAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLA 174
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ YT I + K F L+++MK + PNL TY +L+ R G L
Sbjct: 175 ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL---SLA 231
Query: 641 LAVYQDMWKAG 651
V+ ++ K G
Sbjct: 232 FKVFDEISKRG 242
>gi|167998422|ref|XP_001751917.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697015|gb|EDQ83352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1216
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 158/377 (41%), Gaps = 55/377 (14%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
A+ E + +++ LN+ NS +A + L+ +L + ++N+LL C
Sbjct: 543 AVLESM-DEHLILNMKKVNSYEFYSACKKRRALKEAFKFSRLVRRKSLRNFNMLLSVCAH 601
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A + A + VK L+ D Y+T++ A A + K +M G+
Sbjct: 602 AQDASSACRVLDMVKM----AGLQADCIFYTTLISACAKASRIDLMFKFFNEMEIQGIEA 657
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T+ ++I+ CA AG V +A ++++ML EP+ N L+ AC A F RAF +
Sbjct: 658 NVQTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVL 717
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ + P + H
Sbjct: 718 -------------------------------ADMRDAPQPIALDHI-------------- 732
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ AC + R + MR+ +S +T + AC G + AL I M
Sbjct: 733 TYGALIAACSRAGEVERALEVYKRMRSSKVSGTTECYTAAVHACSHKGYLNIALSIYDDM 792
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
REDG+ PD V + + V + ++ AF++ +EMK+ +P+ VTY TL+ A S+ +
Sbjct: 793 REDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTKPSPVTYNTLMVACSK---V 849
Query: 635 HEVQQCLAVYQDMWKAG 651
+ + + VY+++ G
Sbjct: 850 DDAENAMRVYEEIKALG 866
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVY 312
N+ +ID C GD K+ IY+ + +Q V + +FN+L+ F EV
Sbjct: 658 NVQTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVL 717
Query: 313 KNMQKL--GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+M+ + D +Y L+ AC AG A E+Y ++ + G + Y+ V
Sbjct: 718 ADMRDAPQPIALDHITYGALIAACSRAGEVERALEVYKRMRSSKVSGTTE----CYTAAV 773
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + +AL + +DM GV P+ + + ++++ +AG ++ A + +EM G +
Sbjct: 774 HACSHKGYLNIALSIYDDMREDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTK 833
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF 456
P+ N L+ AC + + A R++
Sbjct: 834 PSPVTYNTLMVACSKVDDAENAMRVY 859
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKR------FSF-----KPTTTTYNILMKAC 525
D ++ +E D+ I N YS+ KR F F + + +N+L+ C
Sbjct: 540 DCVAVLESMDEHLILNMKKVNSYEFYSACKKRRALKEAFKFSRLVRRKSLRNFNMLLSVC 599
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
D +++ ++ GL + I +T LI AC + ++ + M G+ +V
Sbjct: 600 AHAQDASSACRVLDMVKMAGLQADCIFYTTLISACAKASRIDLMFKFFNEMEIQGIEANV 659
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ I C R+ + +AF ++++M + +++P+ V + TL+ A R G+ + LA
Sbjct: 660 QTFGAMIDGCARAGDVPKAFGIYKKMLNQEVEPDRVIFNTLITACGRAGAFLRAFEVLAD 719
Query: 644 YQD 646
+D
Sbjct: 720 MRD 722
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+IY+D+R V + F ++M+V H K + + M+ +G +YN L+ AC
Sbjct: 787 SIYDDMREDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKNIGTKPSPVTYNTLMVAC 846
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ A +Y E+K L + +L L
Sbjct: 847 SKVDDAENAMRVYEEIKALGLRPILFL 873
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 161/380 (42%), Gaps = 56/380 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN-VTLNIYVFNSLMN--VNAHDLKFTL 309
+P+ Y T+I G + +++++ ++ V N ++N+L+ + +L+ L
Sbjct: 180 APDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVAL 239
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M GV +A+YN+ + + G A E + V+ + KG L D FTY+ +
Sbjct: 240 RYRGEMVDRGVSMTVATYNLFVHTLFMEGR---AAEAHALVEEMGEKG-LAPDAFTYNIL 295
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A+K+ E M+ G+ +T++SLI+A + G+V++ LF + ++ G
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ N L+ + DRAF + M +K+
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEI--------------------------MGEMEKKR 389
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
IT P TYN LM+ C + L+ EM G+ P+
Sbjct: 390 IT---------------------PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+S+ LI G+++ A+++ M G +P ++ Y IK + + A L +
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I P+ TYI+L+
Sbjct: 489 EMVGNGITPDDSTYISLIEG 508
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 42/408 (10%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+ S ++Y L+S ++ + + L++ F L + ++ +L + ++NI+L
Sbjct: 66 HTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVL--FADIFRLRLPLSTTTFNIML 123
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C AG V A E+ ++ A TY+T++ F Q +++ +M
Sbjct: 124 RHLCTAGKPVRALELLRQMPSPNA--------VTYNTVIAGFCARGRVQAGIEIMREMRE 175
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQF 449
G+ P+ T++++I+ G VE A +F+EML G EPN+ N L+ +
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235
Query: 450 DRAFRLFRSWTLSKTQVALGEDY---------DGNTDR----ISNMEHKDKQSITNTPNF 496
+ A R +R + + Y +G + M K T N
Sbjct: 236 EVALR-YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+ N + ++ + K T TY L+ A L N+ G
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG 354
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + LI++ G+++ A +I+ M + ++PD V Y T ++ RL +A
Sbjct: 355 IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L EEM IQP+LV+Y TL+ S G +++ + V +M G
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKG---DIKDAVKVRDEMMGKG 459
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 38/188 (20%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
DA ++ + P++++ +I+ GD ++ I ++ + +T
Sbjct: 349 DAVRRGIR-PDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT---------------- 391
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
D +YN L++ CL G E G ++ + +G+ + D+
Sbjct: 392 -----------------PDDVTYNTLMRGLCLLGRL---DEARGLIEEMTKRGI-QPDLV 430
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ ++ + A+KV+++M+ G P +T++++I G A L +EM
Sbjct: 431 SYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490
Query: 425 LQAGCEPN 432
+ G P+
Sbjct: 491 VGNGITPD 498
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 186/454 (40%), Gaps = 71/454 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++R + ++ + + +N+L++ A +K +
Sbjct: 241 SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATD 300
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G D+ +YN+L C AG A ++ E++ L G++ DV TY+T+V
Sbjct: 301 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL---GIVSPDVVTYNTLV 357
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL + E+M GV + +T + ++ G +E+A+ E M + G
Sbjct: 358 DACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT 417
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDK 487
P+ N L+ A +A +AF L S ++ + + NT + +++
Sbjct: 418 PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM---DTFTLNTLLYNLCKEKRYEEA 474
Query: 488 QSITNTP---NFVPN---------SHYSSFDK-----------RFSFKPTTTTYNILMKA 524
+ + P FVP+ +++ + + P+ +TYN L+K
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKG 534
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
T +A+ +NE+ +GL P+ ++ I+I A G++E A Q M E+ PD
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594
Query: 583 VVA-----------------------------------YTTAIKVCVRSKRLKQAFSLFE 607
VV Y T I+ + + A F
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFA 654
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+M+ +QP++ TY LL A S G E Q+ L
Sbjct: 655 DMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKML 688
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 136/356 (38%), Gaps = 89/356 (25%)
Query: 290 NIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N Y FN L++ + L L MQ G+ D +YN LL A C G +
Sbjct: 208 NHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKG-------ML 260
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
GE + L A+ M G+ P T+++L++A
Sbjct: 261 GEARTLLAR--------------------------------MKKEGIVPTRATYNTLVSA 288
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A G ++QA + E M G EP+ N+L +A + D AF+L
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL------------ 336
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC-- 525
KD+ ++ P TYN L+ AC
Sbjct: 337 -----------------KDE-----------------MEQLGIVSPDVVTYNTLVDACFK 362
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ EMR G+ + ++ I++ G +E AL L++M E+G++PDV+
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT 422
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y T I ++ + +AF L +EM ++ + T TLL + E ++ L
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+T++ +V AL M G++P+ +T+++L+NA G++ +A L
Sbjct: 210 YTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLAR 269
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G P N L+ A RL W T V
Sbjct: 270 MKKEGIVPTRATYNTLVSAYA---------RL--GWIKQATDVV---------------- 302
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
+++T F F+P TYN+L C +A L +EM
Sbjct: 303 ----EAMT----------------AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342
Query: 542 VGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+G+ SP+ +++ L+DAC AL +L+ MRE G+ +V + +K R +L+
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A E M + P+++TY TL+ A + G+ V + + +M ++G
Sbjct: 403 EALGRLEMMTEEGLTPDVITYNTLIDASCKAGN---VAKAFVLMDEMVRSG 450
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 132/330 (40%), Gaps = 55/330 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+ID G+ K+ + +++ + ++ + N+L+ + ++ E
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + + G + D SY ++ A A ++ E+ K L + TY+T++
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM----IKRKLTPSISTYNTLI 532
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+ +++ G+ P+ T++ +I+A G +E+A +M++ +
Sbjct: 533 KGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFK 592
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ CN L+ + ++A +LF SW V G+ D
Sbjct: 593 PDVVTCNTLMNGLCLYGRLEKAMKLFESW------VEKGKKVD----------------- 629
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
TYN L++A C D AL +M GL P+
Sbjct: 630 ------------------------VITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDG 578
++ +L+ A +G A ++L + E G
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGL 544
++ +P+ P + +F + + P T+N+L+ C+ AL +++M+ GL
Sbjct: 181 ALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGL 240
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SP+ +++ L++A G + A +L M+++G+ P Y T + R +KQA
Sbjct: 241 SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATD 300
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ E M + +P+L TY L + G + E
Sbjct: 301 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 332
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 504 SFDKRFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
SF +R +P+ N ++ A T + + + L PNH ++ +L+
Sbjct: 161 SFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHC 220
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK I P
Sbjct: 221 SKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRA 280
Query: 620 TYITLLRARSRYGSLH------EVQQCLAVYQDMW 648
TY TL+ A +R G + E D+W
Sbjct: 281 TYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D + + + K+ DL A + ++ ++ P++ C T+++ + G K+
Sbjct: 556 LVPD-DTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKA 614
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++E + +++ +N+L+ +D+ L + +M+ G+ D+ +YN+LL A
Sbjct: 615 MKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSA 674
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG +V AQ++ + L G L F Y +I K +A +VK D+ S G
Sbjct: 675 LSEAGRSVEAQKM---LHKLNESGKL-YGRFFYPSI-KSSVEAVETGKDPEVKSDIESVG 729
Query: 394 VTP--NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
T + +++ I G +++A + +EM+Q G ++ L++ ++
Sbjct: 730 NTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 182/436 (41%), Gaps = 63/436 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K RD A R D +K P+ + TII G+C + A+ Y
Sbjct: 168 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK--GLCDNGRVDSALVHY 225
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLA 337
D++ +N ++ + L++ + + + ++M + G ++ +YN L+ C
Sbjct: 226 RDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A ++ ++ + DVFTY+ ++ + + Q K+ ++M+ G PN
Sbjct: 285 GNMDEAVVLFNQM----LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT+++L+++ +G A +L + ML+ C+P+ N+++ + Q D A+ LF+
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T D+ + P T
Sbjct: 401 LMT-------------------------DRGCL----------------------PDIYT 413
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YNI++ C + L+ M G P+ +++ ++ + V+ A ++ +++R
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G DVV +T I +S+RL A L EM+ P++V Y L+ +
Sbjct: 474 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG---FCKAD 530
Query: 636 EVQQCLAVYQDMWKAG 651
++ + LA + +M G
Sbjct: 531 QLDKSLAFFSEMLDKG 546
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 42/408 (10%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+PN+ T+I+ G C G+ ++ ++ + + + +++ +N L++ +
Sbjct: 268 APNVVTYNTLIN--GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV----F 364
++ + M K G + +YN L+ + +G + A + A+ +L+ D F
Sbjct: 326 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL--------AQMMLRRDCKPSHF 377
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T++ ++ +F +A ++ + M G P+ T++ +I+ A ++ A L E M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRI 479
+AGC P+ N ++ +A Q D A+ ++ R+ V DG + R+
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
+ E ++ +R P Y IL+ C K+L +
Sbjct: 498 DDAEKLLREM-----------------ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G P I+++I+ID S V +LK M E G++PD + YT+ I +S
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD 600
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+A+ L++ MK P +VTY L+ + L E L V +
Sbjct: 601 SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVME 648
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 173/408 (42%), Gaps = 25/408 (6%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K+ PN T++D G Y+ + + + + ++ + + FN ++++ L
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
E+++ M G + D+ +YNI++ C A A+++ ++ + G DV TY
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL---LERMTEAGCPP-DVVTY 449
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++IV A A +V E + + G + +T S+LI+ + ++ A L EM +
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-K 485
G P+ IL+ +A Q D++ F S L K V Y D++ +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFF-SEMLDKGCVPTVITYSIVIDKLCKSARVR 568
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
D + T +R P Y ++ C Y L M+ G
Sbjct: 569 DGCMLLKT-----------MLER-GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+P +++ +L+D ++ A+ +L++M DG PD V Y + +S +AF
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF+ MK P Y LL ++ + ++ Q + ++++ +AG
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLL---TKLVAEEKMDQAMEIWEEALEAG 721
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 50/271 (18%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
FT + ++ F K Q A + ++ +P++IT+S+LIN A +QA L +E
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G P++ N +++ + + D A +R
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYR-------------------------- 226
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
D + + P+ TY IL+ A C A ++ +M
Sbjct: 227 ----------------------DMQRNCAPSVITYTILVDALCKSARISDASLILEDMIE 264
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G +PN +++ LI+ GN++ A+ + M E+ SPDV Y I + +R +
Sbjct: 265 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQD 324
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
L +EM Y +PN +TY TL+ + + G
Sbjct: 325 GAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 56/347 (16%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN----- 397
AQE Y K+ G+ D TYST++ F A+ +Q A ++ ++M G+ P+
Sbjct: 148 AQEAYDLFKNHRC-GLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 206
Query: 398 -----------------------------TITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IT++ L++A + + A + E+M++AG
Sbjct: 207 TIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN N L+ + D A LF L + Y+ D E
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQM-LENSCSPDVFTYNILIDGYCKQER---- 321
Query: 489 SITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
P + ++ +P TYN LM + + A L M
Sbjct: 322 ---------PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+H ++ ++ID G ++ A ++ ++M + G PD+ Y I R+ R+ A
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L E M P++VTY +++ + + E + VY+ + G
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE---VYEVLRNGG 476
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 188 VKELDEEFRIVQLCVNK---PDV---NLAIRYACIVPRAD------------------IL 223
V +LD + + QL ++ PD+ N+ I AC R D +
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR------A 277
+ + V K + A Y+ + ++ C T+ID G+C KSR
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID--GLC----KSRRLDDAEK 502
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ ++ + L++ A L +L + M G + + +Y+I++ C
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ ++ +K + +GV D Y++++ + + A ++ + M G
Sbjct: 563 ---KSARVRDGCMLLKTMLERGVTP-DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T++ L++ +++A+HL E M GC P++ N + ++ + D+AFRL
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRL 678
Query: 456 FRS 458
F++
Sbjct: 679 FQA 681
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V + L +++D + E+YK M++ G + +YN+L+ C E ++
Sbjct: 592 VIDGLCKSDSYDEAY--ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL---DEAIHLLEV 646
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G L D TY+++ F + A ++ + M S G +P +S L+
Sbjct: 647 MESDGCLP-DTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
++QAM ++EE L+AG + + + L Q
Sbjct: 706 KMDQAMEIWEEALEAGADVDPEISRTLQQ 734
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRA 277
D++ C+ + K R L A + +++ S+P++ + TI+ + G C D + KS A
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV-VAYTIL-IHGFCKADQLDKSLA 537
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ++ + + ++ +++ + ++ + K M + GV D Y ++ C
Sbjct: 538 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC 597
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ + A E+Y +K V TY+ +V A+ + E M S G
Sbjct: 598 KSDSYDEAYELYKLMKQTGCAPT----VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCL 653
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+T+T++S+ + + ++A LF+ M GC P ++LL V + D+A +
Sbjct: 654 PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Query: 456 F 456
+
Sbjct: 714 W 714
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 34/395 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R E + V L ++ ++ LM+ A L ++ + + G+ + + LLK
Sbjct: 141 NRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLK 200
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C A T +E + H ++ +VF+YS I+K D Q AL + + M
Sbjct: 201 CLCYANRT---EEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKE 257
Query: 393 G--VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G +PN + ++++I+ G +A LF EM + G +P+ N+++ A +A D
Sbjct: 258 GGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSH 501
+A + R T + Q + G G + M K K S PN V NS
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK-SRGLIPNIVICNSF 376
Query: 502 YSSFDKRF---------------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGL 544
+S K KP +Y L+ ++ + + L N M++ G+
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ + + ILI A G V+ A+ I M++ G+SPDVV Y+T I R RL A
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
F +M IQPN Y ++++ +G L + ++
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKE 531
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 154/350 (44%), Gaps = 57/350 (16%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
LK ++++ M+ G++ ++ N L + C G + A EI+ + AKG K D+
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF---DSMTAKG-HKPDIV 406
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y T++ +A W+ + + M S G+ + ++ LI+A A G+V+ AM +F EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G P+ + ++ A F R RL + VA G
Sbjct: 467 QQQGVSPDVVTYSTVISA------FSRMGRLTDAMEKFNQMVARG--------------- 505
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+P T Y+ +++ C VKA L++EM
Sbjct: 506 --------------------------IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 543 GLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + + +I++ G V A I ++ + G PDV+ +T+ I ++ +
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDK 599
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
AF + + M+ ++ ++VTY TLL + G +++ L ++++M + G
Sbjct: 600 AFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND---GLTLFREMQRKG 646
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 34/312 (10%)
Query: 335 CLAGNTVLAQEIYGEV-KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C+ LA ++ V + V+ L V TYS ++ A+ + L + +L G
Sbjct: 128 CITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTG 187
Query: 394 VTPNTITWSSLINACANAGLVEQAMH-LFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
+ + IT S+L+ A E+A++ L M + GC PN +I+L+ + RA
Sbjct: 188 LKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRA 247
Query: 453 FRLFRSWT----------LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
LF+ ++ V G +G T + ++ H+
Sbjct: 248 LDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE----------------- 290
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN+++ A C KA ++ +M T G P+ +++ +I
Sbjct: 291 ---MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A ++ + M+ G+ P++V + + + R K+A +F+ M +P++V+
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 621 YITLLRARSRYG 632
Y TLL + G
Sbjct: 408 YCTLLHGYASEG 419
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 158/405 (39%), Gaps = 44/405 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
I+ +++ Q V+ ++ ++++++ + + T +E + M G+ + A Y+ +++ C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFC 521
Query: 336 LAGNTVLAQEIYGEV------------------------KHLEAKGVLKL--------DV 363
+ G V A+E+ E+ + ++A + L DV
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDV 581
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
T+++++ + A K+ + M GV + +T+S+L++ G + + LF E
Sbjct: 582 ITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFRE 641
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M + G +PN+ I+L A + A + F S T V + Y +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV-SIYGIILGGLCRNN 700
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
D+ I + + +FS T N + K K L + G
Sbjct: 701 CADEAIIL-------FQKLGTMNVKFSITILNTMINAMYKV--QRKEEAKELFATISASG 751
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ ++I G VE A + M + G+ P I++ + + +A
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ ++ +I T +L SR G HE + L + +
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYNFF 856
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR DI+F N + K ++ A +D P++ ++ID + G K+
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
I + + V +I +++L++ + + L +++ MQ+ GV + +Y I+L
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG TV A++ + E+ +E+ + + + Y I+ A+ + + + +
Sbjct: 661 LFRAGRTVAARKKFHEM--IESGTTVTVSI--YGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V + +++INA E+A LF + +G PN +++ ++ + A
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776
Query: 454 RLFRSW 459
+F S
Sbjct: 777 NMFSSM 782
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 514 TTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
T TY+ILM CC D V L + GL + I+ + L+ + E A+
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLV--LFGCILRTGLKIHQITASTLLKCLCYANRTEEAVN 213
Query: 570 IL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLR 626
+L M E G P+V +Y+ +K + ++A LF+ M + PN+V Y T++
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G E + +++ +M + G
Sbjct: 274 GFFKEG---ETGKACSLFHEMTRQG 295
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 125/583 (21%), Positives = 237/583 (40%), Gaps = 106/583 (18%)
Query: 122 KSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVL 181
+ I GR D VVGV ++ LG+ D + L+ R D V+
Sbjct: 191 RMIASGRTDMVVGVFWEIERLGLDA----DAHTYVLVVQALCRNDDKEGVD--------- 237
Query: 182 EEFRLPVKELDEEFR---------IVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+L ++ L+ E R I LC+N+ ++ Y + P ++ + + G
Sbjct: 238 ---KLLIRLLNSETRNPCVFYLNFIEGLCLNQ---MASMAYLLLQPLREVNILVDMSDLG 291
Query: 233 KK-----RDLVSALRAYDASK------KHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
R L + +R DA K +H P++Y+ II+ + K+ I+
Sbjct: 292 IAYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNK 351
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +N + +S++ F+ ++++ ++L + D YN+ A G
Sbjct: 352 MVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGK 411
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ E + KG+ DV Y+T++ A + +M +G TP+ +
Sbjct: 412 VEEAIELFRE---MTGKGIAP-DVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIV 467
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L A GL ++A+ + M G +P N++++ + A + D+A + S
Sbjct: 468 IYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYES- 526
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-----SFDK--RFSFK 512
+EHK ++ N + V + +F++ R F
Sbjct: 527 ----------------------LEHKSRE---NDASMVKGYCEAGCLDQAFERFIRLEFP 561
Query: 513 PTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ Y L + C + + + L++ M +G+ P + LI A NV A Q
Sbjct: 562 LPKSVYFTLFTSLCAEKNHISKAQDLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQ 621
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR- 628
+I+ + PD+ YT I R LKQA++LF++MK ++P++VTY LL +
Sbjct: 622 FFEILVTKEIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNSNP 681
Query: 629 ------------------------SRYGSLHEVQQCLAVYQDM 647
+RY L++V++ A+++DM
Sbjct: 682 ELDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALFKDM 724
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 179/424 (42%), Gaps = 51/424 (12%)
Query: 235 RDLVSALRAYDASKKHLSSP---NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
R ++ +A+D K + N I +I+ C G++ + ++E+ R N+ L+
Sbjct: 337 RKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDR 396
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N + ++ +E+++ M G+ D+ +Y L+ CCL G A ++
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL--- 453
Query: 350 VKHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+E G K D+ Y+ + A Q AL+ + M GV P +T + +I
Sbjct: 454 --MIEMDGSGKTPDIVIYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGL 511
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR-------------- 454
AG +++A +E + E ++ +++ EA D+AF
Sbjct: 512 IVAGKLDKAEAFYESLEHKSRENDAS----MVKGYCEAGCLDQAFERFIRLEFPLPKSVY 567
Query: 455 --LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--------TPNFVPNSHYSS 504
LF S K ++ +D DR+ + + ++S+ N +
Sbjct: 568 FTLFTSLCAEKNHISKAQDL---LDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQFFE 624
Query: 505 FDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P TY I++ C + + AL +M+ + P+ +++T+L+
Sbjct: 625 ILVTKEIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLL------- 677
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N L + + M + PDVV YT I + +K+A++LF++MK +I P++VTY
Sbjct: 678 NSNPELDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYT 737
Query: 623 TLLR 626
LL+
Sbjct: 738 VLLK 741
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 34/329 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M +LGV + + Y L+ A C N A++ + + L K ++ D+FTY+ +
Sbjct: 586 DLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQFF---EILVTKEIIP-DLFTYTIM 641
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL-VEQAMHLFEEMLQAG 428
+ + + A + +DM V P+ +T++ L+N+ N L V++ M F+
Sbjct: 642 INTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNS--NPELDVKREMEAFD------ 693
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ I++ + +A+ LF+ + + ++ D
Sbjct: 694 VKPDVVLYTIMINRYCQLNDVKKAYALFKD--MKRREIV-----------------PDVV 734
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ T P + K F KP Y +L+ C D K + ++M G+ P
Sbjct: 735 TYTVLLKNNPELDLTREMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDP 794
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +T LI C GN++ A I +M E G+ PD V+YTT I R+ +++AF+L
Sbjct: 795 DAAPYTALIAGCCKMGNLKEAKMIFDLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLM 854
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+EM I+P + + A+S+ L
Sbjct: 855 KEMLEKGIKPTQASLSAVHYAKSKAKGLR 883
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++++ +V +++ + L++ DLK ++ M + GV D A Y L+ CC G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTALIAGCCKMG 810
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A+ I+ L + LK D +Y+T++ F + + A + ++ML G+ P
Sbjct: 811 NLKEAKMIF----DLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGIKPTQ 866
Query: 399 ITWSSLINACANA 411
+ S++ A + A
Sbjct: 867 ASLSAVHYAKSKA 879
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 402 SSLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++L+ A AN + E+A+ +F + G P+ + N LL + + + D +F W
Sbjct: 150 TALVKAYANLEMFEEAIDIFFRTYHSLGRAPDIKALNFLLNRMIASGRTDMVVGVF--WE 207
Query: 461 LSKTQVALGEDYDGNTD--------RISNMEHKDKQSIT--NTPNFVPNSHYSSFDKRFS 510
+ + LG D D +T R + E DK I N+ P Y +F +
Sbjct: 208 IER----LGLDADAHTYVLVVQALCRNDDKEGVDKLLIRLLNSETRNPCVFYLNFIEGLC 263
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+ +L++ R ++ +M +G I++ ++ +E A +
Sbjct: 264 LNQMASMAYLLLQPL-----REVNILVDMSDLG-----IAYRRVVRGLCNEMRIEDAEKA 313
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M E G+ PDV Y+ I+ ++ + +AF +F +M
Sbjct: 314 FLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKM 352
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 164/392 (41%), Gaps = 66/392 (16%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMK 274
VP + F + K DL SA K +P++Y + G+C G
Sbjct: 275 VPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQ--GLCKAGRIQD 332
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNIL 330
+ ++E++R + V N VF +L ++AH ++ LE+++ M G+ D+ +YN L
Sbjct: 333 AVEMFEEMRERGVNPNTVVFTTL--IDAHCKEGNVAAGLELHREMATRGIKTDLVAYNAL 390
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
C + A +I E+++ LK D TY+T++ F MA+++K++M
Sbjct: 391 ANGLCRVRDLKAANDIVEEMRN----NGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
GV + +T+++LI+ + +G + + EM++AG EP++ +++ A +
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
F+L + M++K +
Sbjct: 507 TGFKLLKE-----------------------MQNKGR----------------------- 520
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP TYN++M C L+N M +G+ P+ I++ IL+D G V A
Sbjct: 521 -KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE 579
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ + GM D YT+ I V+ K K
Sbjct: 580 E---LKSAKGMVSDFGLYTSLINEFVKKKSTK 608
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 154/371 (41%), Gaps = 28/371 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A Y L V FN LM + + L ++ M + GV + ++N L+
Sbjct: 230 AFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGM 289
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + A + G L AK + DV+TY ++ A Q A+++ E+M GV
Sbjct: 290 CKASDLNSANALRG----LMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGV 345
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PNT+ +++LI+A G V + L EM G + + N L A
Sbjct: 346 NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAND 405
Query: 455 L---FRSWTLSKTQVALGEDYDGNTDRIS-NMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
+ R+ L +V DG +M + KQ +++ + D+
Sbjct: 406 IVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSD--------EGVALDE--- 454
Query: 511 FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TY L+ V + ++ EM GL P++ ++T++IDA + +V+
Sbjct: 455 -----VTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF 509
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++LK M+ G P VV Y + ++K A L M + + P+ +TY LL
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569
Query: 629 SRYGSLHEVQQ 639
++G + + ++
Sbjct: 570 CKHGKVRDAEE 580
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+L AGV P ++ L+ +G + A ++F+EML+ G P N L+ +A
Sbjct: 235 LLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASD 294
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+ A L ++K VA
Sbjct: 295 LNSANAL--RGLMAKAGVA----------------------------------------- 311
Query: 509 FSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TY M+ C R++ + EMR G++PN + +T LIDA GNV
Sbjct: 312 ----PDVYTYGAFMQGLCK-AGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVA 366
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L++ + M G+ D+VAY R + LK A + EEM++ ++P+ VTY TL+
Sbjct: 367 AGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G E+ + + Q+M G
Sbjct: 427 DGFCKEG---ELDMAMEMKQEMSDEG 449
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 212/482 (43%), Gaps = 57/482 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 127
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 128 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 179
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 180 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 235
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 236 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 486 DKQSIT---NTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG 474
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ +
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Query: 646 DM 647
D+
Sbjct: 535 DL 536
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 178/404 (44%), Gaps = 26/404 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 374
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQS 489
P N LL+ FD A +++ + K VA E Y D + ME+ + S
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWH--LMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + R F + T+N ++ C V+A + ++M+ +G SP+
Sbjct: 493 ----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + PN+VTY L+ + G L + + Y +M + G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENG 642
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 185/436 (42%), Gaps = 31/436 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++ +
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME----RE 571
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ + Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 572 XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYD 473
+ EM + G N C+ ++ + D A L + + L D
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691
Query: 474 -GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--------RF-------SFKPTTTT 517
+I++ + ++ N V N + K RF F P T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y L+ + + L +EM GL PN +++ LI+ S NV+ A ++ +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G+ P+VV Y T I + + AF L ++M I P++VTY L+ ++G
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG--- 868
Query: 636 EVQQCLAVYQDMWKAG 651
++++ + + M KAG
Sbjct: 869 DIERSMKLLNQMIKAG 884
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 176/446 (39%), Gaps = 49/446 (10%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-----GDYM 273
++ I F + K +V A +D K SP+ RT+ID G C G
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID--GYCKASNVGQAF 562
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K + E + ++ +I ++NSL++ + L ++ M G+ ++ +Y L+
Sbjct: 563 KVKGAME---REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A Y E+ + L ++ ST+V A + + M+
Sbjct: 620 DGWCKEGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G P+ + + +++ +E + PN+ NI + + + D
Sbjct: 676 HGFFPDH---ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 452 AFRLFRSWTLSK------TQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A R F +L T L Y GN D + +D+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL--RDEML-------------- 776
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
R P TYN L+ C + R + L +++ GL PN +++ LID
Sbjct: 777 ----RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN++ A ++ M E+G+SP VV Y+ I + ++++ L +M + L+ Y
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDM 647
TL++ + + +E+ + A+ Q+M
Sbjct: 893 CTLVQGGFKTSNYNEMSKPEALKQNM 918
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 37/399 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 209
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 265
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 266 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNM-EHKDKQSITNTP 494
D+A + + K + L + Y NT R + M E K+ I
Sbjct: 326 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
PN +Y L+ C D + L EM G P+ +++
Sbjct: 383 GVRPNH---------------VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++D G++ A + K M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 428 VMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PNLV Y L+ ++ G E Q +Y +M G
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDG 523
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 161/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 326
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 417
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K EM GL P
Sbjct: 418 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---KEMEKKGLVP 456
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 517 DNMLGDGLTPDDALYSALV------GSLH 539
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V N + +L+++ N D+ +++ M G + +YN+++ G+
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ K +E KG++ D+++Y+ +V +AL++ E+M G PN + ++
Sbjct: 442 AERFK---KEMEKKGLVP-DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+LI+ A G E+A L++ ML G P+ + L A V + D+
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPD----DALYSALVGSLHTDK 542
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 170/409 (41%), Gaps = 81/409 (19%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY-- 292
+D++ LR A++K L + N I D ++ I + L+ +V L+ +
Sbjct: 328 KDILKQLRWGPATEKALYNLNFSI------------DAYQANQILKQLQDHSVALSFFYW 375
Query: 293 ------------VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ +++ + A + ++ + M K G ++ +YN L+ + A
Sbjct: 376 LKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRAN 435
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A ++ +++ + + D TY T++ + A A + +A+ + E M G++P+T
Sbjct: 436 YLGEALNVFNQMQEMGCEP----DRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDT 491
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S +IN +G + A LF EM+ GC PN NIL+ +A + A +L+R
Sbjct: 492 FTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYR- 550
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
D Q+ FKP TY
Sbjct: 551 ---------------------------DMQNA-------------------GFKPDKVTY 564
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+I+M+ C +A+ EM+ P+ + +LID G +GNVE A + M
Sbjct: 565 SIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLR 624
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G+ P+V + + +R RL A++L + M + P+L TY LL
Sbjct: 625 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 673
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 41/300 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + A+ + K+ E M+ G PN +T++ LI++ A + +A+++F
Sbjct: 385 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVF 444
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGED 471
+M + GCEP+ L+ +A D A ++ ++T S LG+
Sbjct: 445 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 472 YDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCT 527
GN + E D+ + PN V TYNIL ++A
Sbjct: 505 --GNLSAAHRLFCEMVDQGCV---PNIV-------------------TYNILIALQAKAR 540
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+Y L +M+ G P+ ++++I+++ G G +E A + M+++ PD Y
Sbjct: 541 NYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYG 600
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I + ++ +++A+ + M + PN+ T +LL A R +H + + Q+M
Sbjct: 601 LLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLR---VHRLPDAYNLLQNM 657
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y+ ++ SP+ + +I+ G G+ + ++ +
Sbjct: 457 VTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCE 516
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q NI +N L + A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 517 MVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGY 576
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E+K + D Y ++ ++ A + A + ML AG+ PN
Sbjct: 577 LEEAEAVFFEMK----QNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVP 632
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++A + A +L + M+ G P+ Q +LL C EA +D F
Sbjct: 633 TCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGF 687
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L AL ++ ++ P+ T+ID+ G + ++YE
Sbjct: 422 VTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 481
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ + + ++ ++N + +L ++ M G + ++ +YNIL+ A N
Sbjct: 482 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 541
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ K D TYS +++V + + A V +M P+
Sbjct: 542 YQTALKLYRDMQN----AGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEP 597
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ LI+ AG VE+A + ML+AG PN CN LL A F R RL ++
Sbjct: 598 VYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSA------FLRVHRLPDAY 651
Query: 460 TLSKTQVALG 469
L + V LG
Sbjct: 652 NLLQNMVTLG 661
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYN L+ + Y +AL N+M+ +G P+ +++ LID +G ++ A+
Sbjct: 418 QPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMS 477
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+E G+SPD Y+ I +S L A LF EM PN+VTY L L+A
Sbjct: 478 MYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQA 537
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 538 KAR-----NYQTALKLYRDMQNAG 556
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L+ M +DG P+VV Y I R+ L
Sbjct: 378 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 437
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L +++Y+ M + G
Sbjct: 438 GEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFL---DVAMSMYERMQEVG 486
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 198/453 (43%), Gaps = 67/453 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ L A+ + P++ I T+I++ G DY K+ +++ L+
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + ++NS++N+ KF E + M++ G+M D SY IL+ A +
Sbjct: 123 ASGIAPDKVIYNSMINLYGK-AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKY 181
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF--------ADAKWWQMALKVKEDMLSA 392
+ A++++ E+K KG+ +LDV T + ++ V+ A+ +W M+ +
Sbjct: 182 LEAKQVFLEMK---TKGI-QLDVTTCNMMIDVYGKLEMVRDAEELFWSMS-------KTL 230
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEML-QAGCEPNSQCCNILLQACVEACQFDR 451
G+ N +T++++I A L+ +A ++F M + G EPN N +L Q ++
Sbjct: 231 GIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEK 290
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDK-R 508
A RL R M+ + + ++T + +D+
Sbjct: 291 AMRLVR-----------------------KMQQRGIEPNAVTYSTLISIYGKTGKYDRAA 327
Query: 509 FSFKPTTTTY----NILMKACCTDYYR------VKALMNEMRTVGLSPNHISWTILIDAC 558
F FK IL ++ Y R K L+ E++ + P + +IL A
Sbjct: 328 FLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAE 387
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+E A ++ E G + V Y + I++ +R+KR K A +FE M+ P+
Sbjct: 388 ----KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDS 443
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T + LL A YG L +++ +Y DM + G
Sbjct: 444 ETTVVLLAA---YGQLRQLEDAEKLYLDMRERG 473
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 156/329 (47%), Gaps = 18/329 (5%)
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ F++L++ A+ L+ + + M+ G+ D+ ++ L++ + A ++ +
Sbjct: 61 FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSK 120
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K A G+ D Y++++ ++ AK+++ A + +M AG+ P+T++++ LINA A
Sbjct: 121 LK---ASGIAP-DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYA 176
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
+ +A +F EM G + + CN+++ + A LF W++SKT LG
Sbjct: 177 ESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF--WSMSKT---LG 231
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCT 527
+ T +K+ + ++ N + + +P TYN + +
Sbjct: 232 IQQNVVTYNTMIKVYKEAELLSEAFNV-----FYYMQNKGGVEPNVITYNTILFLHGLTL 286
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + L+ +M+ G+ PN ++++ LI G +G + A + K +RE G D + Y
Sbjct: 287 QHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQ 346
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ I V R+ + A L EE+K I P
Sbjct: 347 SMIVVYERAGLVAHAKRLLEELKQPDIVP 375
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P+ YN+++K + + L+ EM L P+ +++ LI G + +E A
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ L+ M G+ PD+V ++T I++ + K +A SLF ++K I P+ V Y +++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ E Q LA +M +AG
Sbjct: 140 YGKAKFYKEAQGLLA---EMKEAG 160
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 171/413 (41%), Gaps = 59/413 (14%)
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y + ++ +L+ + ++ + + F E+ +M+ L + D+ ++NI L +
Sbjct: 67 YSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFV 126
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G LA E++ ++ K K DV TY+ I+ K + A++ DM+ G +P
Sbjct: 127 EGRIDLALEVFEKI----VKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182
Query: 397 N------------------------------------TITWSSLINACANAGLVEQAMHL 420
+ T+ +++LI+ AG +++A +
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
M + GCEP+ N+ L + D A +L + S + + Y+ I
Sbjct: 243 KSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV-YSYNQLLKGIC 301
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
DK + T P +YN ++KA C D L E
Sbjct: 302 KGNCPDKAYLLMTNKMWPKG-----------LCDVVSYNTIIKAFCKIGDTTSAYKLFEE 350
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+ +++TI I A G G+ A ++L M E G+SPD + YTT I +S +
Sbjct: 351 MGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGK 410
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A S+F +M I P+++++ L+ + V + + +Y++M G
Sbjct: 411 VEMAHSIFCDMVEQGISPDVISFNALING---FCKCSRVSEAMHLYEEMQNRG 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++++ M + G+ D+ ++ I +KA G+ +A+++ ++ + L D Y+TI
Sbjct: 346 KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG----LSPDCIFYTTI 401
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + +MA + DM+ G++P+ I++++LIN V +AMHL+EEM G
Sbjct: 402 IDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGS 461
Query: 430 EPNSQCCNILLQACVE------AC-----QFDRAFRLFRS 458
P+ +++ +E AC D+ F L R+
Sbjct: 462 YPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRA 501
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 49/221 (22%)
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + S I AGL+++A+ +F+EM Q+ C S N + + +FD A
Sbjct: 10 LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLA------ 63
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
N +YS R F ++ TY
Sbjct: 64 ----------------------------------------NHYYSQMGTR-GFSLSSFTY 82
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + C ++ + L+++M T+ P+ ++ I + G ++ AL++ + + +
Sbjct: 83 SRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVK 142
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G PDVV YT I + K+ A + +M H P+
Sbjct: 143 NGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + F F++ F K A + D + SP+ TIID G +
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+I+ D+ Q ++ ++ FN+L+N + + +Y+ MQ G D +Y +++
Sbjct: 416 SIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGL 475
Query: 335 CLAGNTVLAQEIYGEV 350
+A ++G++
Sbjct: 476 IEEKKISIACMVWGQM 491
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 168/369 (45%), Gaps = 31/369 (8%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F ++ A +++ + ++ +++ G ++ Y L+ CC G A+
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ K L + +TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEM----GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTL 461
+N G + A +F+EM + G N N L+ C E A + ++ +S+ +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYN+L
Sbjct: 335 NPNLITYNTLIDGFCSV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNVL 379
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ +++TILID S N+E A+Q+ M E G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV Y+ I C++ ++ +A LF+ M ++PN V Y T++ + GS +
Sbjct: 440 VPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY--- 495
Query: 639 QCLAVYQDM 647
+ L +++DM
Sbjct: 496 RALRLFRDM 504
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 185/419 (44%), Gaps = 56/419 (13%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A KV + M S + PN IT+++
Sbjct: 288 FKVFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RS 458
LI+ + G + +A+ L ++ G P+ N+L+ A ++ R
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDK-QSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK + D +D NME + +S VP+ H T
Sbjct: 404 IKPSKVTYTILIDTFARSD---NMETAIQLRSSMEELGLVPDVH---------------T 445
Query: 518 YNILMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
Y++L+ C +K MNE M L PN + + +I G+ AL++
Sbjct: 446 YSVLIHGFC-----IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRL 500
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E ++P+V +Y+ I+V + ++LK+A L E+M I P+ + RA++
Sbjct: 501 FRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRAKT 559
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 29/313 (9%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E+K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSK 463
+E+A LF EM + G N +L+ + + F ++ +T +
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNC 273
Query: 464 TQVALGEDYDGNT-DRISNMEHKDKQSIT------NT------PNFVPNSHYSSFD--KR 508
L + DG T D + ++ ++ NT N D K
Sbjct: 274 VMNQLCK--DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+ P TYN L+ C+ KAL ++++ GLSP+ +++ +L+ G+ G
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A +++K M E G+ P V YT I RS ++ A L M+ + P++ TY L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 627 ARSRYGSLHEVQQ 639
G ++E +
Sbjct: 452 GFCIKGQMNEASR 464
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 63/293 (21%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +INA + ++ +++ F EM+ G P S C N LL V + F++ + F
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
SK +V L + Y E + + SFD + F F P
Sbjct: 155 -SKIKVVL-DVYSFGIVIKGCCEAGEIEK--------------SFDLLVELREFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM GL N ++T+LI +G + ++ +
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM------------------------ 609
M+E G+ P++ Y + + R K AF +F+EM
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 610 -----------KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K Y I PNL+TY TL+ + S+ ++ + L++ +D+ G
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDG---FCSVGKLGKALSLCRDLKSRG 368
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 50/352 (14%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G D+ +YNIL+ C G+ A+++ V + +G + +V TY+ +V
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL---VNEMSRRGC-EPNVITYAILVNG 434
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + A V +M + G+T N++ ++ LI A V A++L EM GC+P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N L+ + + D AFRLF + L DG ++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLL-----------DG--------------AVAN 529
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTT---------------TYNILMKACCT--DYYRVKAL 535
N N+ + +R +F+ T TYN L+KA C + + L
Sbjct: 530 --NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M GL + IS I+I+ G V+ A + L+ G PD+V Y + + +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
R+K+A +LF+ ++ ++P+ TY T + + + G +++ CL Y+ +
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA--CLFFYRGI 697
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 30/300 (10%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VFT+ ++K A + DM G PN+I + +LI+A + V +A+ L E
Sbjct: 218 VFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLE 277
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRI 479
EM GC P+ Q N ++ + + A +L L + G G RI
Sbjct: 278 EMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG-LCRI 336
Query: 480 SNMEHKDK---------QSITNTPNFVPNSHYSSFDKR------------FSFKPTTTTY 518
+ K +I NT + N + S + F F+P TY
Sbjct: 337 GKLNEARKILIKIPCPNNAILNT---LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NILM C + + L+NEM G PN I++ IL++ +G +E A +L M
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++ + V Y I R +++ A +L EM +P+L TY +L+ + + E
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 67/382 (17%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
RDLV+ + + PN+ +++ G+C G ++ + ++ ++ +T+N
Sbjct: 410 RDLVNEM------SRRGCEPNVITYAILVN--GLCKAGLLEEAGLVLHEMSARGLTINSV 461
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+ + L + M G D+ +YN L+ C E +
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI---DEAFRLF 518
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
++ G + +V TY+T++ +Q AL + DML G T + IT++ LI A
Sbjct: 519 HNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + L+E+M+ G ++ CNI++ + + D AF R
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR------------- 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D I+ F P TYN ++ C
Sbjct: 625 ------DAINR----------------------------GFVPDIVTYNSVLNGLC-KVG 649
Query: 531 RVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K +N ++ G+ P+ ++ I G V A E+G P + +
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ + F + +E+
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
N P N Y K S PT T+ I+MKA C + +L+ +M G PN I
Sbjct: 197 NCPQVATNVFYDMLSKGVS--PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI A V AL++L+ M G PDV + I + ++ A L + M
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
P+ +TY LL R G L+E ++ L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 535 LMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ +MR V L P S+ ++++ + A + M G+SP V + +K
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A SL +M + PN + Y TL+ A S+ ++V + L + ++M+ G
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK---NQVSEALKLLEEMFVMG 283
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 183/439 (41%), Gaps = 60/439 (13%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
P + + V + + +L +A++ D + K L S N + ++I + G +
Sbjct: 284 PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES-NATVYTSVIALLCNKGQVSDAL 342
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ED+ V L+ VF ++++ + DL +++ MQK G+ AD ++ L+
Sbjct: 343 RVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGL 402
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C AG A + E + KG L +DV TY+ ++ + A +V +M+ V
Sbjct: 403 CRAGELKEADRVLQE---MVDKG-LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T+++L + G V A L EM G E N N L+ + ++A R
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ ++ ME ++
Sbjct: 519 I-----------------------MTEMEAAGHRT------------------------D 531
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+ C ++ R ++ EM G+ P+ ++ +L++ SG VEG ++L+
Sbjct: 532 VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLE 591
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M E + P+VV Y + +K K +K +++ M ++ PN TY L++ +
Sbjct: 592 WMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKAR 651
Query: 633 SLHEVQQCLAVYQDMWKAG 651
++ E L +Q+M + G
Sbjct: 652 NMKEA---LYFHQEMIEKG 667
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 23/351 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
A++ +L +NV + + +L++ A LK + ++ ++ D+ +Y ++ C+
Sbjct: 245 ALFRELPDKNVCSHNILLKALLS--AGRLK---DACQHFDEMSSPPDVVTYGTMVHGYCV 299
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E + AKG L+ + Y++++ + + AL+V EDM GV
Sbjct: 300 RGELENAVKLLDE---MAAKG-LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVAL 355
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + ++++I+ + G + A LFEEM + G + L+ A + A R+
Sbjct: 356 DAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVL 415
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+ V G D D T + + + ++ H +R + P
Sbjct: 416 QEM------VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV----HNEMVGRRVA--PNVV 463
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L C D L++EM GL N ++ LI+ GN+E A++I+ M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G DV YTT I +S +A ++ +EM I+P++ TY L+
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLM 574
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 59/354 (16%)
Query: 262 IIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQK 317
+ID G C G+ +++ ++ ++ + V N+ + +L + D++ E+ M
Sbjct: 433 LID--GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ ++ +YN L+ C GN A I E +EA G + DV+TY+T++ +
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTE---MEAAG-HRTDVYTYTTLIDTLCKSG 546
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ A + ++ML G+ P+ T++ L+N +G VE L E ML+ PN N
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYN 606
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
L+ + + + K + E Y G M ++
Sbjct: 607 SLM----------------KQYCIDKNMKSTTEIYKG-------MHSQE----------- 632
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILI 555
P TYNIL+K C +AL EM GL S++ LI
Sbjct: 633 -------------VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A MR +G++ + Y+ + + L+ +L +E+
Sbjct: 680 RLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
FD+ S P TY ++ C + L++EM GL N +T +I G
Sbjct: 278 FDE-MSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKG 336
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V AL++L+ M G++ D V +TT I L A LFEEM+ + + VT+
Sbjct: 337 QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHT 396
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ R G L E + V Q+M G
Sbjct: 397 ALINGLCRAGELKEADR---VLQEMVDKG 422
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G C G + + E + +NV N+ +NSLM D +K T E+YK M V
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ +YNIL+K C A N + + +Y + +E KG L+L +YS ++++ K + A
Sbjct: 636 NENTYNILIKGHCKARN--MKEALYFHQEMIE-KG-LRLTASSYSALIRLLNKKKKFSEA 691
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+ M + G+T +S ++ N +E + L +E+++A
Sbjct: 692 RVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEA 736
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 59/361 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+Y D++ N++ +N L+ + K ++ M G D SY ++ + C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E+ + + V Y+ ++ ++ A ++ +M+ G++
Sbjct: 228 EVGLVKEGRELAERFEPV---------VSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++S+LIN N+G +E A +ML+ GC PN + L++ C
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-----------F 327
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T + ++ + F +P
Sbjct: 328 LRGTTFDALDL-----------------------------------WNQMIRGFGLQPNV 352
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN L++ C+ VKA + + M +G SPN ++ LI+ G+++GA+ I
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G P+VV YT ++ R + K+A SL E M P++ T+ ++ G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 634 L 634
L
Sbjct: 473 L 473
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + + ++ + ++ N+ +++L+NV N+ ++ M K G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C L G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN A G ++ A++++ +ML +GC PN +++A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 432 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +++TYN L+ C AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A Q+L ++ PDV++YT I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
RS + L E M I P++ T+ L+
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 42/347 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ +++ G + YN +L L N + Q IY + ++ G + +VFTY+
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTL-LGENRI--QMIYMVYRDMKRDG-FEPNVFTYNV 186
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A K+ +M + G P+ ++++++I++ GLV++ L E
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF---- 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP N L+ + + AF L R + + +
Sbjct: 243 -EPVVSVYNALINGLCKEHDYKGAFELMR-------------------EMVEKGISPNVI 282
Query: 489 SITNTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MN 537
S + N + NS + FSF P T + L+K C AL N
Sbjct: 283 SYSTLINVLCNS--GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 538 EM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M R GL PN +++ L+ GN+ A+ + M E G SP++ Y + I +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
L A ++ +M PN+V Y ++ A R+ E + + +
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 123/318 (38%), Gaps = 39/318 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
PN+ T++ G C G+ +K+ +++ + + NI + SL+N A L +
Sbjct: 350 PNVVAYNTLVQ--GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 463
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRIS 480
E +S N LL A A +L ++ + L G +R +
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
M D S R ++P +Y ++ C R L+
Sbjct: 584 QM--LDLVSC----------------GRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 539 MRTVGLSPNHISWTILID 556
M + G+ P+ +W++LI+
Sbjct: 626 MISAGIVPSIATWSVLIN 643
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + F K+ L A+ ++ PN+ + +++ + ++ ++ E +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+N ++ FN+ + +A L + +V++ M Q+ ++ +YN LL A
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E YG + + +GV + TY+T++ +A +AL++ M+ G +P+ IT
Sbjct: 510 ---EEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 401 WSSLINACANAGLVEQAMHLFE 422
+ +I A G E+A + +
Sbjct: 566 MNMIILAYCKQGKAERAAQMLD 587
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
++H PN+ ++D ++ + ++ + V + +N+L++ NA
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L++ M G D + N+++ A C G A ++ V K + DV +
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK--WRPDVIS 602
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y+ ++ + + + + E M+SAG+ P+ TWS LIN
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 46/352 (13%)
Query: 294 FNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+N A + ++ M + + D+ SY+IL+ C A+++Y ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L +V TY+ + A V E+M++AG +P+ IT+S+LI+ +
Sbjct: 509 IDLNCVP----NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A +QA LFE M+ GC PN+ N LL + + D A LFR V G
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM------VERGC 618
Query: 471 DYDGNTDRISNME--------HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
D DR++ K +Q++ V H P YN L+
Sbjct: 619 D----PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH----------DPDVVAYNCLL 664
Query: 523 KACCTDYYRV------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
K ++R K L M + P+ +S I+ID + ++ A+++ + M +
Sbjct: 665 KG----FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720
Query: 577 D-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
D G SPD+V Y + I +RL +A +F+E+ ++ P+ + LL A
Sbjct: 721 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 52/312 (16%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN LL + C A A I+ + ++ DV +YS ++ F A K+
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFST---MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M+ PN T+++ +N G + A ++EEM+ AGC P+ + L+ A
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ D+A LF +T ++ G
Sbjct: 566 RKHDQAHELF------ETMISRG------------------------------------- 582
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+P TYN L+ C + +A L +M G P+ +++T L+ G +
Sbjct: 583 ----CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A+++ M G PDVVAY +K R+ + +A LF+ M Q +P+ V++ +
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIM 698
Query: 625 LRARSRYGSLHE 636
+ S+ L +
Sbjct: 699 IDGLSKAKRLDD 710
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 131/340 (38%), Gaps = 54/340 (15%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK-GVLKLDVFTY 366
L + + M K G DMA++++L+ C A AQE ++ ++ K F+Y
Sbjct: 393 ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF---LQGMDRKISSRSSSCFSY 449
Query: 367 STIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++++ AK A + M+S P+ +++S LI+ + +A L+++M+
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C PN N L + R R+ + + + VA G
Sbjct: 510 DLNCVPNVTTYNAFLNGLM------RKGRIADAQGVYEEMVAAG---------------- 547
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVG 543
P TY+ L+ + + + L M + G
Sbjct: 548 -------------------------CSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ L+ + A ++ + M E G PD V YTT + +++QA
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+F+EM P++V Y LL+ R G E +Q V
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
K DVFTY+ ++ + + A +V E M++ GV PN T++ L+ + ++A+
Sbjct: 125 FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAV 184
Query: 419 HLFEEMLQAGCEPNS---QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
F EM+ G +P+S Q L+A + +F R F G D +
Sbjct: 185 RFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVF---------------GRDLE-- 227
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------SFKPTTTTYNILMKACCT-- 527
R++ +E K+++ NFV K F KP T Y+ ++ A C
Sbjct: 228 -KRVA-VEMMLKKALL--VNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLE 283
Query: 528 DYYRVKALMNEMRTVGLSP-NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L EM +P N+++WT + SG +E A + + M+E +S Y
Sbjct: 284 NLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVY 342
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I++ + S R+ +A E+ IQP+ T ++++ + G V L++ +
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG---RVDSALSLLET 399
Query: 647 MWKAG 651
M K G
Sbjct: 400 MIKRG 404
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
G ++ +YE++ + + ++ +++L++ HD E+++ M G +
Sbjct: 531 GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH--ELFETMISRGCRPNAV 588
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN LL C A E++ + + +G D TY+T++ F + + A++V
Sbjct: 589 TYNCLLHGLCKESKPDEAHELF---RKMVERGC-DPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++M+S G P+ + ++ L+ AG +A LF+ M+ C+P++ NI++ +
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 446 ACQFDRAFRLF 456
A + D A +F
Sbjct: 705 AKRLDDAVEVF 715
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 156/373 (41%), Gaps = 27/373 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+++N +++ +N L++ + DLK +V++ M GV+ + +Y +L+++ C N
Sbjct: 120 LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERN 179
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +GE + KG K Y + + A K + + D+
Sbjct: 180 SDEAVRFFGE---MVDKG-FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMM 235
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ + L+N +E A LF M+++GC+P++ + ++ A + D AF+LF
Sbjct: 236 LKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLE 294
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ + ++N+ S + + + + S + Y
Sbjct: 295 MAVE------------SKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVY 342
Query: 519 NILMKACCTDYYRVKALMNEMRTVG--LSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++L++ KA + G + P+ + +I +G V+ AL +L+ M +
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSL 634
G PD+ ++ I ++ ++++A + M K + +Y +LL + + +
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 635 HEVQQCLAVYQDM 647
H Q A++ M
Sbjct: 463 H---QAFAIFSTM 472
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 152/370 (41%), Gaps = 57/370 (15%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ Y + + +N + L+ V F V M K G ++ +YNILLK
Sbjct: 93 SFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGL 152
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A + E++ + L DV +Y+T+++ F + K + AL++ +M +G
Sbjct: 153 CRNLEFGKAVSLLREMR----QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + +TW LI+A AG +++AM L +EM G E + L++ + + DR
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF D + +E D P
Sbjct: 269 LF--------------------DEV--LERGD-------------------------SPC 281
Query: 515 TTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L++ C R+K + M G+ PN ++T LID G G + ALQ+L
Sbjct: 282 AITYNTLIRGFCK-LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+M + P+VV Y I + + A + E MK + +P+ +TY +LL
Sbjct: 341 NLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAK 400
Query: 632 GSLHEVQQCL 641
G L E + L
Sbjct: 401 GDLDEASKLL 410
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 169/389 (43%), Gaps = 25/389 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
CG+ + +A+++++ + + +N+L+ LK E+++ M + GV ++ +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYT 319
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y L+ C G T A ++ +L + + +V TY+ I+ AL++
Sbjct: 320 YTGLIDGLCGVGKTKEALQLL----NLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACV 444
E M P+ IT++SL+ G +++A L ML+ +P+ N L+
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG-- 433
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ +R + + L ++ G+ N S ++ D + NS
Sbjct: 434 -LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK--- 489
Query: 505 FDKRFSFKPTTTTYNILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSG 562
P + TY ++ C T V K L+ +MR L P+ + L+ + G
Sbjct: 490 ------IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ A ++ + M+ D PDV+++ I +++ +K A SL M H + P+L TY
Sbjct: 544 TLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYS 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ +R+ L + + ++ + M +G
Sbjct: 604 KLI---NRFLKLGYLDEAISFFDKMIDSG 629
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 178/405 (43%), Gaps = 28/405 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I++ + +R F +L +D + SP T+I G C G ++ I+
Sbjct: 248 IVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR--GFCKLGRLKEASEIF 305
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E + + V N+Y + L++ K L++ M + ++ +YNI++ C
Sbjct: 306 EFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLC-- 363
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGVT 395
++++A + E+ L K + D TY++++ A K+ ML S+
Sbjct: 364 KDSLVADAL--EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ I++++LI+ + QA+ +++ +++ + NILL + +++ ++A L
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMEL 481
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ + SK N+D + M + K + N + S P+
Sbjct: 482 WKQISNSKIVP--------NSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS-----ELPPS 528
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
YN L+ + C +A L EM+ P+ IS+ I+ID +G+++ A +L
Sbjct: 529 VFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLV 588
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
M G+SPD+ Y+ I ++ L +A S F++M +P+
Sbjct: 589 GMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
S P +YN +++ C KAL NEM+ G S + ++W ILIDA +G ++ A
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ +LK M+ G+ D++ YT+ I+ L + +LF+E+ P +TY TL+R
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L E + +++ M + G
Sbjct: 292 FCKLGRLKEASE---IFEFMMERG 312
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + K L AL YD + L + ++ +++ GD K+ +++
Sbjct: 425 ISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQ 484
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N + ++++ L + M+ + + YN LL + C G
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGT 544
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E++ ++ DV +++ ++ A + A + M AG++P+
Sbjct: 545 LDQAWRLFEEMQRDDSFP----DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLF 600
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+S LIN G +++A+ F++M+ +G EP++ C+ +L+ C+ + D+
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 237 LVSALRAYDASK-----KHLSS----PNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQ 285
L S L++ D +K K +S+ PN T+ID G C M ++ + +R
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMID--GFCKTGMLNVAKGLLCKMRLS 523
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ +++ +N L++ L +++ MQ+ D+ S+NI++ AG+ A
Sbjct: 524 ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSA 583
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + + H L D+FTYS ++ F + A+ + M+ +G P+ S
Sbjct: 584 ESLLVGMSH----AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVEACQFDRAFRLFR 457
++ C + G ++ ++++ + + C ++ C + D A RL R
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLR 694
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 212/482 (43%), Gaps = 57/482 (11%)
Query: 207 VNLAIRYACIVPRADILFCNFV----------REFGKKRDLVSALRAYDASKKHLSSPNM 256
V+ +R + P A + F FV + + K ++S R YD ++ +L+
Sbjct: 37 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ--- 93
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
++D+C + I+++L + + VF+ ++ V K L V+
Sbjct: 94 -----LVDLCKFKD---RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVF 145
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
NM K G + + S N LL G T A +Y ++ + G++ DVF S +V
Sbjct: 146 DNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV---GIVP-DVFMVSIMVNA 201
Query: 373 FA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F D K + A VK+ M + GV PN +T+ SLIN + G VE A + + M + G
Sbjct: 202 FCKDGKVDEAAGFVKK-MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 260
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW----TLSKTQVALGEDYDG--NTDRISNMEHK 485
N +L++ + C+ D A ++ R L + A G DG T +I +
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320
Query: 486 DKQSIT---NTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCT 527
+ + T F+ NS + + KR ++ KP + +YN L+ C
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 380
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + +A L ++M G+ P +++ L+ G + ALQI +M + G++PD V
Sbjct: 381 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 440
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y+T + + + + A +L++++ + +T+ T++ + G + E ++ +
Sbjct: 441 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Query: 646 DM 647
D+
Sbjct: 501 DL 502
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 178/404 (44%), Gaps = 26/404 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++I+ GD ++ + + + + V+ N+ + L+ K +V
Sbjct: 225 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 284
Query: 312 YKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ MQ+ ++ D +Y +L+ C G A + E+ L LK ++F ++++
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG----LKTNLFICNSLI 340
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A V M+ + P++ ++++L++ G +A +L ++MLQ G E
Sbjct: 341 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQS 489
P N LL+ FD A +++ + K VA E Y D + ME+ + S
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWH--LMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
+ + R F + T+N ++ C V+A + ++M+ +G SP+
Sbjct: 459 ----------TLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LID + NV A ++ M + +SP + Y + I +S+RL + L
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + PN+VTY L+ + G L + + Y +M + G
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGML---DKAFSSYFEMTENG 608
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 170/401 (42%), Gaps = 27/401 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + K +P+ T++D ++ + +++D+ ++ T + FN++++
Sbjct: 422 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 481
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E++ M+ LG D +Y L+ C A N A ++ G ++
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+++ Y++++ ++ + +M G+TPN +T+ +LI+ G++++A
Sbjct: 542 SIEM----YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+ EM + G N C+ ++ + D A L + V G D
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK------MVDHGFFPDHECF 651
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVK 533
S++ + Q I + S D+ + P YNI + C +
Sbjct: 652 LKSDIRYAAIQKIAD-----------SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + G P++ ++ LI +GNV+ A ++ M G+ P++V Y I
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+S+ + +A LF ++ + PN+VTY TL+ + G++
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 801
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 181/456 (39%), Gaps = 80/456 (17%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL +D K P++ C ++++ G+ + +Y+ + + ++++ + ++
Sbjct: 140 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N D K K M+ LGV ++ +Y+ L+ G+ A+ G +K + K
Sbjct: 200 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK---GVLKFMSEK 256
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINACANAGLVE 415
GV + +V TY+ ++K + A KV M A + P+ + LI+ G ++
Sbjct: 257 GVSR-NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 315
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTL---SKTQVALG 469
A+ L +EML+ G + N CN L+ + + A + W L S + L
Sbjct: 316 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 375
Query: 470 EDY--DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ Y +G+T N+ K Q +PT TYN L+K C
Sbjct: 376 DGYCREGHTSEAFNLCDKMLQE--------------------GIEPTVLTYNTLLKGLC- 414
Query: 528 DYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL------------- 568
RV A + + M G++P+ + ++ L+D N EGA
Sbjct: 415 ---RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471
Query: 569 ----------------------QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+I M++ G SPD + Y T I ++ + QAF +
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 531
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
M+ I P++ Y +L+ + L EV L
Sbjct: 532 GAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 135/341 (39%), Gaps = 37/341 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K++ G ++N ++ C G V A+EI+ ++K L D TY T++
Sbjct: 460 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP----DGITYRTLI 515
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A A KVK M ++P+ ++SLI+ + + + L EM G
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKD- 486
PN L+ + D+AF + T LS + G R+ ++ +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG-LYRLGRIDEANL 634
Query: 487 -KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
Q + + F + + D R++ ++ ++E L
Sbjct: 635 LMQKMVDHGFFPDHECFLKSDIRYA-----------------AIQKIADSLDESCKTFLL 677
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN+I + I I +G V+ A + ++ G PD Y T I + + +AF L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737
Query: 606 FEEMKHYQIQPNLVTYITLL----------RARSRYGSLHE 636
+EM + PN+VTY L+ RA+ + LH+
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 778
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YNI + C G A+ + L KG + D FTY T++ ++ A A +++
Sbjct: 683 YNIAIAGLCKTGKVDDARRFF---SMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLR 738
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ML G+ PN +T+++LIN + V++A LF ++ Q G PN N L+ +
Sbjct: 739 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 798
Query: 447 CQFDRAFRL 455
D AF+L
Sbjct: 799 GNMDAAFKL 807
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 145/382 (37%), Gaps = 49/382 (12%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-----GDYM 273
++ I F + K +V A +D K SP+ RT+ID G C G
Sbjct: 471 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID--GYCKASNVGQAF 528
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K + E + ++ +I ++NSL++ + L ++ M G+ ++ +Y L+
Sbjct: 529 KVKGAME---REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G A Y E+ + L ++ ST+V A + + M+
Sbjct: 586 DGWCKEGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 641
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G P+ + + +++ +E + PN+ NI + + + D
Sbjct: 642 HGFFPDH---ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698
Query: 452 AFRLFRSWTLSK------TQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A R F +L T L Y GN D + +D+
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL--RDEML-------------- 742
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
R P TYN L+ C + R + L +++ GL PN +++ LID
Sbjct: 743 ----RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 798
Query: 562 GNVEGALQILKIMREDGMSPDV 583
GN++ A ++ M E+G+SP +
Sbjct: 799 GNMDAAFKLKDKMIEEGISPSI 820
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + D +Y L+ AGN A + E+ +G++ ++ TY+ ++ ++
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR---RGLVP-NIVTYNALINGLCKSEN 765
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A ++ + G+ PN +T+++LI+ G ++ A L ++M++ G P+ QC
Sbjct: 766 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQC 822
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 172/402 (42%), Gaps = 56/402 (13%)
Query: 283 RSQNVTLNIYVFN----SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
R + +++ +N +L NA L + E ++ MQ+ G D +Y+I+L+ C AG
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAY--EKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPN 397
A+E+ G+++ GV KL+V TYS ++ A AL++ + M G P+
Sbjct: 88 ELDKAKELLGQLRE---SGV-KLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T++SL+ + + +A LFE M +AGCEPN + LL +A + D A RL+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 458 SWT-----------------------------LSKTQVALGEDYD--------GNTDRIS 480
+ V G D G +
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 481 NMEHKDKQSITN-TPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACC-----TDYYRV 532
+ E Q I + + + + +F++ S P+ +N L+ A C D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
M M+ PN ++ I++D + ++ A +++ M G+SPDVV Y+ +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +L +A L EEM + P+ T ++L A S+ G +
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 21/392 (5%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG-VM 321
G+C G+ K++ + LR V LN+ ++ +++ A + LE++K M G +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ ++N LLK C +G + E + +++ AK + +V +YST++ A
Sbjct: 142 PDVVTFNSLLKGLC-SGERM--SEAFVLFEYM-AKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL- 440
A ++ E+M+ P+ + ++S + A V +A +M+ G + ++ + ++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 441 ----QACVEACQFDRAFRLFRSWTLSKT----QVALGEDYDGNTDRISNMEHKDKQSITN 492
+ E Q L RS L + + + ++ + + + + H +S
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS-KR 316
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
P+ V K F P TYNI++ C + L+NEM GLSP+ ++
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ L+D G ++ A +L+ M ++G+ PD + + ++ ++ A S E MK
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
P+LVTY TLL + G + E LA
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 142/368 (38%), Gaps = 61/368 (16%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+E++ S+N + +FN+L++ D + K+M++ ++ +YNI++
Sbjct: 289 FEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN 348
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A AQE+ E+ A L DV TYS +V A + E+M G
Sbjct: 349 LCKAKQLDEAQELVNEM----ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P++ T +S++NA + AG V+ A+ E M G P+ N LL +A + D A
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+K P
Sbjct: 465 TFLAKMVAAKCT-----------------------------------------------P 477
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y I++ A C A+ EM G+ P+ + + L+D +G + AL++L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K PD V + + ++ + + A + E M + TYI ++R +
Sbjct: 538 KTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594
Query: 632 GSLHEVQQ 639
G + + +Q
Sbjct: 595 GKVDKARQ 602
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 164/399 (41%), Gaps = 56/399 (14%)
Query: 267 GICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C S A ++E + N+ +++L++ A L +++ M + +
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-----ADAK 377
D+ +Y + C A A + + + KG K D +ST++ + A+
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDC---CRKMVTKGS-KADAVAFSTVIGILCKKGHAEEA 268
Query: 378 WWQM------------ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
QM A K E+M+S P+ +++LI+A + + + LF+ M
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 426 QAG---CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDG----- 474
C PN + NI++ +A Q D A L ++ LS V DG
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388
Query: 475 NTDRISNM-EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
DR ++ E K+ + P+S + + N L KA DY
Sbjct: 389 KLDRACDLLEEMSKEGV------FPDSFTDA-----------SILNALSKAGKVDY--AL 429
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+ + M+ G +P+ +++ L+D +G ++ A+ L M +PDV +YT I
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
RS + A ++F+EM + P+ V Y +LL +R G
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG 528
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFT 308
SP++ ++D G+C G ++ + E++ + V + + S++N A + +
Sbjct: 371 SPDVVTYSALVD--GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + M+ G D+ +YN LL C AG + + I K + AK DVF+Y+
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGR--IDEAITFLAKMVAAK--CTPDVFSYTI 484
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ + A + ++M+ GV P+T+ + SL++ A GL + A+ L + L
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL--- 541
Query: 429 CEPN 432
C+P+
Sbjct: 542 CKPD 545
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
K+ PN+ ++D +++ + ++ + ++ ++ +++L++ L
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE---AKGVLKLD 362
++ + M K GV D + +L A AG A + HLE A+G D
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA------LSHLETMKARGSTP-D 443
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ TY+T++ A A+ M++A TP+ +++ +I A +G A +F+
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
EM++ G P++ + LL D A L ++
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 192/469 (40%), Gaps = 72/469 (15%)
Query: 233 KKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL 289
K + +R +D K + PN+ ++D G+C G + + ++E + + N+
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD--GLCKFGRFKEVGEVWERMVANNLQP 297
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ + L++ + D+ VY + K G++ D A YN L+K C AG A + +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 348 GE---------------VKHLEAKGVLK----------------LDVFTYSTIVKVFADA 376
+K L G++ D T+ T++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A + E+ +G + ++SS+IN N G + A+ ++E+M + GC+PNS
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 437 NILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSIT 491
N L+ + + A R++ S T + DG ++ ++ +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 492 NTPNFVPN-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCTDYYR 531
N F P+ + Y S DK+ K +NIL+ C+
Sbjct: 538 N--GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 532 VKAL-----MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+AL M E + PN +++ L+D +G ++ A + + EDG+ PD+++Y
Sbjct: 596 DEALHVFSDMKEKKNC--PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
T IK R+ + L +E+ I P ++T+ L+RA +YG +
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 28/433 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + K+ L AL D + P++ ++ C G++ K +++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N+ +N +++ K EV++ M + D+ +Y IL+ C +G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y E+ K L +D Y+++VK F A Q A K + AG+ N
Sbjct: 314 DVDGAARVYSEI----IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ +I ++G+V++A+ L++ + + C P++ L+ + ++AF +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S Q+ + Y + + N+ D + Y DK KP +
Sbjct: 429 EARVSGKQLDVFS-YSSMINGLCNVGRLVDAVKV-----------YEKMDKD-GCKPNSH 475
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN L+ C Y A + ++M G SP I++ LID + + A + + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G +PD+ Y + I+ K++ A S+++++ + ++ +++ + L+ G
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG-- 593
Query: 635 HEVQQCLAVYQDM 647
+V + L V+ DM
Sbjct: 594 -KVDEALHVFSDM 605
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 175/403 (43%), Gaps = 32/403 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM-NVNAHD-LKFTLE 310
+PN+ ++ GD ++ +++ LR + V + +++LM + D L L+
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTI 369
+ M + GV D+ YN LL C AG ++ + VK A+ L TY+ +
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLA----TYNVM 270
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ +V E M++ + P+ IT+ LI+ +G V+ A ++ E+++ G
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGL 330
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------TLSKTQVALGEDYD-GNTD---RI 479
++ N L++ +A + A++ + S L + + +D G D +
Sbjct: 331 VIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIEL 390
Query: 480 SNMEHKDKQSITNTPNF-----------VPNSHYSSFDK-RFSFKPTTT-TYNILMKACC 526
++ KD I +T F N ++ F++ R S K +Y+ ++ C
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
V A + +M G PN + LI A++I M ++G SP V+
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y T I ++++ ++A S+ EM P++ TY +L+R
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 135/321 (42%), Gaps = 49/321 (15%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ +++
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + + V P+ IT+S+L+ A ++ A+ L +EM ++G +P+ C N
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
LL C +A +F++ R++ D++ KD +
Sbjct: 233 ALLGGCFKAGEFEKVMRVW--------------------DKLV----KDPGA-------- 260
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+P TYN+++ C + V + M L P+ I++ ILI
Sbjct: 261 --------------RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG+V+GA ++ + + G+ D Y + +K ++ R+++A+ ++ ++
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 616 PNLVTYITLLRARSRYGSLHE 636
NL TY +++ G + E
Sbjct: 367 -NLRTYNIMIKGLFDSGMVDE 386
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 24/336 (7%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ ++ +YNI+L++ C G+ A ++ ++ + + D TYST++ A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ----VAPDCITYSTLMCGLAKQDRL 209
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNI 438
AL + ++M +GV P+ + +++L+ C AG E+ M +++++++ G PN N+
Sbjct: 210 DHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+L C+F R + W + VA D T I + H + + +
Sbjct: 270 MLDGL---CKFGRFKEVGEVW---ERMVANNLQPDVITYGI--LIH----GLCRSGDVDG 317
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILID 556
+ S + YN L+K C RV+ + G + N ++ I+I
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQ-AGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376
Query: 557 ACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG V+ A+++ ++ +D PD V + T I ++ +AF++FEE + Q
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +Y +++ G L + + VY+ M K G
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDA---VKVYEKMDKDG 469
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
F + + +F +R + P TYNI++++ C D R L + +R ++P+ I+++
Sbjct: 141 FFASLSHGAFGRRIA--PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYST 198
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHY 612
L+ ++ AL +L M G+ PDVV Y + C ++ ++ +++++ K
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PNL TY +L ++G EV +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGE 285
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 192/469 (40%), Gaps = 72/469 (15%)
Query: 233 KKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTL 289
K + +R +D K + PN+ ++D G+C G + + ++E + + N+
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD--GLCKFGRFKEVGEVWERMVANNLQP 297
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ + L++ + D+ VY + K G++ D A YN L+K C AG A + +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 348 GE---------------VKHLEAKGVLK----------------LDVFTYSTIVKVFADA 376
+K L G++ D T+ T++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A + E+ +G + ++SS+IN N G + A+ ++E+M + GC+PNS
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 437 NILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSIT 491
N L+ + + A R++ S T + DG ++ ++ +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 492 NTPNFVPN-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCT---- 527
N F P+ + Y S DK+ K +NIL+ C+
Sbjct: 538 N--GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ V + M E + PN +++ L+D +G ++ A + + EDG+ PD+++Y
Sbjct: 596 DEALHVFSDMKEKKNC--PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
T IK R+ + L +E+ I P ++T+ L+RA +YG +
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 28/433 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + K+ L AL D + P++ ++ C G++ K +++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N+ +N +++ K EV++ M + D+ +Y IL+ C +G
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y E+ K L +D Y+++VK F A Q A K + AG+ N
Sbjct: 314 DVDGAARVYSEI----IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ +I ++G+V++A+ L++ + + C P++ L+ + ++AF +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S Q+ + Y + + N+ D + Y DK KP +
Sbjct: 429 EARVSGKQLDVFS-YSSMINGLCNVGRLVDAVKV-----------YEKMDKD-GCKPNSH 475
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
YN L+ C Y A + ++M G SP I++ LID + + A + + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E+G +PD+ Y + I+ K++ A S+++++ + ++ +++ + L+ G
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG-- 593
Query: 635 HEVQQCLAVYQDM 647
+V + L V+ DM
Sbjct: 594 -KVDEALHVFSDM 605
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ +++
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + + V P+ IT+S+L+ A ++ A+ L +EM ++ +P+ C N
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
LL C +A +F++ R++ D++ KD +
Sbjct: 233 ALLGGCFKAGEFEKVMRVW--------------------DKLV----KDPGA-------- 260
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
+P TYN+++ C + V + M L P+ I++ ILI
Sbjct: 261 --------------RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG+V+GA ++ + + G+ D Y + +K ++ R+++A+ ++ ++
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 616 PNLVTYITLLRARSRYGSLHE 636
NL TY +++ G + E
Sbjct: 367 -NLRTYNIMIKGLFDSGMVDE 386
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 150/336 (44%), Gaps = 24/336 (7%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ ++ +YNI+L++ C G+ A ++ ++ + + D TYST++ A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ----VAPDRITYSTLMCGLAKQDRL 209
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNI 438
AL + ++M + V P+ + +++L+ C AG E+ M +++++++ G PN N+
Sbjct: 210 DHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+L C+F R + W + VA D T I + H + + +
Sbjct: 270 MLDGL---CKFGRFKEVGEVW---ERMVANNLQPDVITYGI--LIH----GLCRSGDVDG 317
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP--NHISWTILID 556
+ S + YN L+K C RV+ + G + N ++ I+I
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQ-AGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376
Query: 557 ACGGSGNVEGALQILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
SG V+ A+++ ++ +D PD V + T I ++ +AF++FEE + Q
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +Y +++ G L + + VY+ M K G
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDA---VKVYEKMDKDG 469
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
F + + +F +R + P TYNI++++ C D R L + +R ++P+ I+++
Sbjct: 141 FFASLSHGAFGRRIA--PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST 198
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHY 612
L+ ++ AL +L M + PDVV Y + C ++ ++ +++++ K
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQ 639
+PNL TY +L ++G EV +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGE 285
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 188/442 (42%), Gaps = 46/442 (10%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL-RSQNVTLNIYVF 294
DL+ AL+ +D ++ +ID GDY K + I+E L + +V N+ +
Sbjct: 201 DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTY 260
Query: 295 NSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N ++N +F +LE+++ M K DM +Y+ L+ C AGN A +Y E+
Sbjct: 261 NIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI-- 318
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED-----MLSAGVTPNTITWSSLINA 407
+ L +D T++ ++ F A K+KE ++ ++++ LI
Sbjct: 319 --VESSLVVDAVTHNAMLNGFCRAG------KIKESFELWMVMGKENCQTVVSYNILIKG 370
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-------- 459
G VE+A+ ++E + + GC P S +L+ + + ++A ++F+
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLD 430
Query: 460 TLSKTQVALGEDYDGNTDR-ISNMEHKDKQSITNTPN--------FVPNSHYS---SFDK 507
+ + + G +G D IS + DK+ P+ FV S +F +
Sbjct: 431 AYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFR 490
Query: 508 RFSFK---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K PT +YN L+K C + + + EM P+ I+ ++L+D
Sbjct: 491 EMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEK 550
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E AL + + + G PD+ Y + +L+ A L+ MK PNLVT
Sbjct: 551 KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRN 610
Query: 623 TLLRARSR---YGSLHEVQQCL 641
TL+ + Y E+ C+
Sbjct: 611 TLMEGLYKVRDYEKASEIWDCI 632
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 18/335 (5%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ +++ + K G + +Y +L+ C G A +I+ E + G KLD + YS
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAED----GPGKLDAYAYS 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++V A+ + M G + + LIN A +E A++ F EM
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P N L++ +A +F A+ + L K + D I+ D
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKE-MLEK---------EWKPDMITCSLLMDG 545
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
N + DK FKP T YNILM C+ AL + M+
Sbjct: 546 LCQEKKIEMALNLWQQALDK--GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ + E A +I + +DG+ PD+++Y IK R+ A
Sbjct: 604 PNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEF 663
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ + I P VT+ L+RA + + + C
Sbjct: 664 LNDALNRGILPTAVTWNILVRAAVNFRTSSVLSAC 698
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 138/347 (39%), Gaps = 57/347 (16%)
Query: 308 TLEVYKNMQKL-GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ ++NMQ + G + SYN LL A A+ + ++ L+ TY
Sbjct: 99 ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQ----TY 154
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++K+ + + A+ + + M S + P+ ++ +LIN G + A+ +F+EM
Sbjct: 155 NILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSV 214
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G + C N+L+ + +D+ +
Sbjct: 215 RGVVADVTCYNMLIDGFFKHGDYDKGKEI------------------------------- 243
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
+ K S P TYNI++ C + + M
Sbjct: 244 ---------------WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNER 288
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ +++ LI +GN++GA+++ K + E + D V + + R+ ++K++F
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ M Q +V+Y L++ G +V++ +++++ + K G
Sbjct: 349 LWMVMGKENCQ-TVVSYNILIKGLFENG---KVEEAISIWELLCKKG 391
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 54/251 (21%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
++I A A + +A+ F+ M GC+P + N LL A VE ++DRA
Sbjct: 85 TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA--------- 135
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+S + + P TYNIL
Sbjct: 136 --------------------------------------ESFSRYFESMDVSPNLQTYNIL 157
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K C KA L++ M + L P+ S+ LI+ G++ GAL++ M G+
Sbjct: 158 IKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGV 217
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
DV Y I + + ++E + K + PN+VTY ++ + G E
Sbjct: 218 VADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDE-- 275
Query: 639 QCLAVYQDMWK 649
L +++ M K
Sbjct: 276 -SLEIWERMTK 285
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 189/459 (41%), Gaps = 79/459 (17%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGE-----------------DYDGNTDRISNMEHKDKQSITNTP 494
+ Q+ LG D T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PNLVTY TL+R Y +L V Q + ++ M G
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKG 522
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 159/383 (41%), Gaps = 36/383 (9%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS--LMNVNAHDLKFTLEVY 312
N+ T+I+ + GD ++ L + + Y + S L A L V+
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M G + +Y LL AG A ++ ++ D Y+T+V
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMR----ADSCAPDTHVYATMVHG 186
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+A + A + E+ +S G PN + +++LI+ NAG +E A+ +FE M C PN
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEH 484
+ L+ ++ + +RA LF ++ T + G+ +G+ + H
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ T VPN T+++L+ A C + + +
Sbjct: 307 -----LMETNGLVPNDW---------------TFSVLIDALCKREKVEEAQLFLGSLVKK 346
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N + +T LID +G ++ A ++++ M +G PD +Y++ I R K+L QA
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
+ E+M IQ + VTY ++
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIII 429
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
PN +LL+ V+ D + +++ + QV L
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 170/382 (44%), Gaps = 26/382 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P M +ID G GD + +ED+R Q + N+ V+ S++ D+
Sbjct: 131 PGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERT 190
Query: 312 YKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ MQ+ GV + +YN ++ + G + ++ V+ + A L LD FT+S
Sbjct: 191 FAEMQRSSGDGVEPNRTTYNAMVHSY---GQQQMMDKMEALVERMRADPGLGLDNFTHSA 247
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V ++ A AL+ + + + G P+ W+++++ AG ++ + ++M + G
Sbjct: 248 VVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLG 307
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG-EDYDGNTDRISNMEHKDK 487
+P++ N ++ A +A F++ + + VA + Y+ D
Sbjct: 308 VKPSTAVYNTIINAFGKARNIHSMMDTFKA--MRRDGVAADVKTYNTLID---------- 355
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLS 545
+ T V + KR +PT T LM A + +V L++ M+ G +
Sbjct: 356 -TWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRA 414
Query: 546 PNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+++ + +LID G G E A ++L M+E G++ + +T+ I+ R+ L +A
Sbjct: 415 PDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEE 474
Query: 605 LFEEMK-HYQIQPNLVTYITLL 625
M Y +P++ T TLL
Sbjct: 475 WLHRMNTDYATKPDIKTLTTLL 496
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 144/363 (39%), Gaps = 65/363 (17%)
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ VF+ L+ A D + +V ++M+++GV M++Y IL+ A AG+
Sbjct: 98 LAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDL-------- 149
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ WQ EDM G+ PN + ++S+I
Sbjct: 150 ---------------------------RRMWQ----AWEDMREQGLRPNVVVYTSVIATL 178
Query: 409 ANAGLVEQAMHLFEEMLQA---GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G V F EM ++ G EPN N ++ + + D+ L +
Sbjct: 179 GKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVER---MRAD 235
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK------RFSFKPTTTTYN 519
LG D N H + + V + +FD + S T +
Sbjct: 236 PGLGLD---------NFTHSAVVAAWSRAGRV-DKALEAFDSIAATGGQPSLHAWTAILH 285
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+L A +D + +++M+ +G+ P+ + +I+A G + N+ + K MR DG+
Sbjct: 286 MLGTAGRSD--EMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGV 343
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ DV Y T I ++ + +A + MK +QP + T +L+ A +R +V +
Sbjct: 344 AADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLR 403
Query: 640 CLA 642
++
Sbjct: 404 LIS 406
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 127/324 (39%), Gaps = 22/324 (6%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV--FTYSTIVKVFADAKWWQMA 382
A Y +L++ C LA ++Y ++ V + +++ + A Q
Sbjct: 58 AKYEMLIEQCFEEKRPDLATQLYDHLRAETTTTQAAAPVPLAVFDVLLQGYGRAGDRQRL 117
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+V+ DM GV P T++ LI+A AG + + +E+M + G PN ++
Sbjct: 118 AQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIAT 177
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSH 501
+ R F ++ Q + G+ + N + M H +Q + +
Sbjct: 178 LGKLGDVAAMERTF-----AEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMD--------K 224
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRV----KAL--MNEMRTVGLSPNHISWTILI 555
+ +R P N A + R KAL + + G P+ +WT ++
Sbjct: 225 MEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAIL 284
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
G +G + L+ L M+ G+ P Y T I +++ + F+ M+ +
Sbjct: 285 HMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVA 344
Query: 616 PNLVTYITLLRARSRYGSLHEVQQ 639
++ TY TL+ ++ G E ++
Sbjct: 345 ADVKTYNTLIDTWAKTGKAVEAEK 368
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+++L++ D R+ + +MR VG+ P ++TILIDA G +G++ Q + MR
Sbjct: 101 FDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMR 160
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYG 632
E G+ P+VV YT+ I + + F EM+ ++PN TY ++ + YG
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHS---YG 217
Query: 633 SLHEVQQCLAVYQDM 647
+ + A+ + M
Sbjct: 218 QQQMMDKMEALVERM 232
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 43/238 (18%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++ + FGK R++ S + + A ++ + ++ T+ID G +++ Y +
Sbjct: 314 VYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLM 373
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + +Y SLM+ A + L + M+K G D +N+L+
Sbjct: 374 KREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLI--------- 424
Query: 341 VLAQEIYGEV-KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ YG + K EA+ VL + Y G+ T
Sbjct: 425 ----DTYGRMGKPEEAEKVLCGAMKEY--------------------------GIALETN 454
Query: 400 TWSSLINACANAGLVEQAMHLFEEM-LQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++S+I A A G +++A M +P+ + LL C+ A R R+
Sbjct: 455 NFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIKTLTTLLSFCIPAADVKRGRRVI 512
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 454 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 46/416 (11%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTD--YYRVKAL 535
PN V S +S + S P T+N L+ A + + + L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDG 465
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 162/348 (46%), Gaps = 17/348 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 295
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 411
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 412 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 570
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 442
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 443 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 535 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMR 602
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 143/357 (40%), Gaps = 62/357 (17%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V A + E++ M + G++ + +YN L+ AC G AQE++
Sbjct: 154 VKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMW------------ 201
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ M++ + PN IT++S+I G + A
Sbjct: 202 ---------------------------DQMVARQIDPNVITYTSMICVLCEEGCIGDAER 234
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNT 476
LF+ M +AG PN N+L+ + + AF L++ L V DG
Sbjct: 235 LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC 294
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
E KD + P RF PT YN LM D +
Sbjct: 295 KAKRFSEAKDM--FRDMP-------------RFGVAPTVPVYNSLMDGAFRSGDAQEALS 339
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM +GL P+ + +I++ G ++ A + L+ +REDG++ + AY I
Sbjct: 340 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ L++A + M ++PN+V+Y +L+ S+ G + Q +A+Y +M G
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKM---QIAMAIYTEMVAKG 453
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 168/411 (40%), Gaps = 56/411 (13%)
Query: 225 CNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN V + K R A +D + P++ T+I+ C G K++ +++ +
Sbjct: 146 CNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMV 205
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + N+ + S++ V + + ++ M++ G+ + +YN+L+ C +
Sbjct: 206 ARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVN 265
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +Y E+ + G++ + ++T++ F AK + A + DM GV P +
Sbjct: 266 SAFVLYQELLN---SGLIP-NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVY 321
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SL++ +G ++A+ L++EM + G P+ C+I+++ + Q A R
Sbjct: 322 NSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLE---- 377
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G DG YN L
Sbjct: 378 -------GVREDG------------------------------------VNLNAAAYNAL 394
Query: 522 MKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + +AL M VG+ PN +S++ LID G ++ A+ I M G+
Sbjct: 395 IDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
P+VV YT I ++ + AF +EM I PN +T L+ R
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 37/349 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN + T+ID G C + +++ ++ D+ V + V+NSLM+ + D + L
Sbjct: 281 PNAVVFTTLID--GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+Y+ M +LG+ D + +I+++ C G +A V+ GV L+ Y+ +
Sbjct: 339 SLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE---DGV-NLNAAAYNAL 394
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + AL M GV PN +++SSLI+ + G ++ AM ++ EM+ G
Sbjct: 395 IDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISN--- 481
EPN L+ + D AFR + +S + + DG +R+ +
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVR 514
Query: 482 --MEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----PTTTTYNILMKACCTD--YYRV 532
MEH + S SF F+ + P + Y L+ D +Y
Sbjct: 515 FVMEHSG----------IKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEA 564
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
L + MR G+ + ++T+LI G V A+ + M + G+ P
Sbjct: 565 GKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 195/453 (43%), Gaps = 39/453 (8%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+ LAI C + R ++L + + +G + A D ++H S + I +I +
Sbjct: 593 LRLAISQGCELDRENLL--SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIM- 649
Query: 267 GICGDYMKSRAIYEDLRSQNVTL---NIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVM 321
+C + A+ E ++++ L + ++ SL+ + F +++ +M+ GV
Sbjct: 650 -LCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 708
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
Y ++ C G A + + E KG+L DV ++ +++ + K WQ
Sbjct: 709 PSDHLYRSMVVTYCKMGFPETAHYL---IDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 765
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A + + + W++LI+A A +G E+A +F M++ G P N L+Q
Sbjct: 766 AESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 825
Query: 442 ACVEACQFDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
A + + D + + + + +SK+ + L D + I F
Sbjct: 826 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI----------------F 869
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
Y K + PT Y I++ A V+A+++EM P+ W +
Sbjct: 870 EVKKIYQGM-KAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSV 928
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ G G+ + Q+ ++++E G+ PD Y T I + R +R ++ SL EM+ +
Sbjct: 929 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 988
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L TY +L+ A +G L V+Q +++ +
Sbjct: 989 EPKLDTYKSLISA---FGKLQMVEQAEELFEGL 1018
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 32/433 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G+ AL Y+ + +H SPN + TI+ V G + I+
Sbjct: 156 FCFVVKWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-- 212
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ + N + V+N++M V A +FT E+ M+ G D+ S+N L+ A +G
Sbjct: 213 RAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGT 272
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V LA E+ EV+ + ++ D+ TY+T++ + + A+KV DM++ P+
Sbjct: 273 MVTNLAIELLNEVR----RSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 328
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ G+ +A LF+++ G P++ N LL A D+ +
Sbjct: 329 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 388
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-PTTT 516
++ G+D + + I +M K Q + + YS D + S + P
Sbjct: 389 D----MVKMGFGKD-EMTYNTIIHMYGKRGQ------HDLAFQLYS--DMKLSGRSPDAV 435
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY +L+ + +A +M+EM + P +++ LI +G A + M
Sbjct: 436 TYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCM 495
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PD +AY+ + + +R +A L++EM + +P+ Y +LR +
Sbjct: 496 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 555
Query: 635 HEVQQCLAVYQDM 647
+V + V +DM
Sbjct: 556 EDVHK---VVKDM 565
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+R + I P DI+ N + ++ +L A++ Y+ H P+++ +I V G C
Sbjct: 285 VRRSGIQP--DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRC 342
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G ++ +++DL S+ + +NSL+ A + + E+ ++M K+G D +Y
Sbjct: 343 GMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTY 402
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ G LA ++Y ++K L + D TY+ ++ A + A +V
Sbjct: 403 NTIIHMYGKRGQHDLAFQLYSDMK-LSGRSP---DAVTYTVLIDSLGKANMIKEAAEVMS 458
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML+A V P T+S+LI A AG +A F+ ML++G +P+ +++L +
Sbjct: 459 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 518
Query: 448 QFDRAFRLFRSWTL 461
+ +A +L++ L
Sbjct: 519 ESGKAMKLYQEMVL 532
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 21/242 (8%)
Query: 415 EQAMHLFEEM-LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
++A+ ++E + L+ PN++ +L +A Q A +F A E
Sbjct: 169 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIF----------ARAEAAS 218
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
GNT ++ N T F + +P ++N L+ A V
Sbjct: 219 GNTVQVYNAMMG---VYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVT 275
Query: 534 ----ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L+NE+R G+ P+ I++ LI AC N+E A+++ M PD+ Y
Sbjct: 276 NLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAM 335
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I V R ++A LF++++ P+ VTY +LL A +R G++ +V++ + +DM K
Sbjct: 336 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE---ICEDMVK 392
Query: 650 AG 651
G
Sbjct: 393 MG 394
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 159/389 (40%), Gaps = 49/389 (12%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY---KN 314
+ +I G Y ++RAI+ + + + N LM D + E+Y +
Sbjct: 784 VWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLD-ELYVVIQE 842
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK---------------HLEAKGV- 358
+Q +G +S ++L A AGN ++IY +K L AKG
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 902
Query: 359 ---------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
K D+ +++++K++ ++ +V + + AG+ P+ T+++
Sbjct: 903 VRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 962
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI E+ + L EM + G EP L+ A + ++A LF LSK
Sbjct: 963 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEG-LLSK 1021
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ DR + H + N+ N K +PT T ++LM
Sbjct: 1022 ---------ECKLDR--SFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1070
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ +A +++ ++ GL + + ++ +IDA +G+ A+Q L M++DG+ P
Sbjct: 1071 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1130
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
D +T ++ S+ +A L + ++
Sbjct: 1131 DHRIWTCFVRAASLSQHTSEAIVLLKALR 1159
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 181/399 (45%), Gaps = 39/399 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + T++ G G ++ A+++ ++ N+ +N ++ + +FT LE+
Sbjct: 347 PNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N +L C G + + ++ +++ GV +L TY+T++
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVC---GKRGMEDYVTRVLEGMKSCGV-ELSRDTYNTLIA 462
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M SAG P T+++L+N + G A + +M G +P
Sbjct: 463 AYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKP 522
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N Q ++LLQ A ++A + + +F SW + +T V + R+ +
Sbjct: 523 NDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIA----NFKCRRLGGI 578
Query: 483 EH--KDKQSITNTPNFV----------PNSHYSS----FD--KRFSFKPTTTTYNILMK- 523
E ++ ++ P+ V N YS FD K+ P TYN LM
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638
Query: 524 -ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
A C++ + + ++N++++ + P+ +S+ +I+ G ++ A +IL M DGM+P
Sbjct: 639 YAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 698
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
VV Y T + + +A + M + ++P +TY
Sbjct: 699 VVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTY 737
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 56/387 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +LR Q V + +N +++V + + M+
Sbjct: 178 TVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 237
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ ACC G L E + L+A+G V TY+ +++VF A
Sbjct: 238 AGVEPDDFTASTVIAACCRDG---LVDEAVAFFEDLKARGHTPC-VVTYNALLQVFGKAG 293
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M G P+ +T++ L A AG E+A + M G PN+ N
Sbjct: 294 NYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYN 353
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A + D A LF D++
Sbjct: 354 TVMTAYGNIGKVDEALALF--------------------DQM------------------ 375
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ P TYN + M + + + ++ EM G +PN ++W ++
Sbjct: 376 ---------KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 426
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G + ++L+ M+ G+ Y T I R AF ++ EM
Sbjct: 427 AVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFA 486
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLA 642
P L TY LL SR G Q ++
Sbjct: 487 PCLTTYNALLNVLSRQGDWSTAQSIVS 513
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 200/459 (43%), Gaps = 71/459 (15%)
Query: 248 KKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-- 304
++ +P + ++DV G G + + A+ +++R+ V + + ++++ D
Sbjct: 200 RRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGL 259
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+ + +++++ G + +YN LL+ AGN A + +K +E G + D
Sbjct: 260 VDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV---LKEMEQDGC-QPDAV 315
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ + +A A +++ A K + M S G+ PN T+++++ A N G V++A+ LF++M
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVAL-----GE 470
++GC PN N +L + +F + + S T +A+ E
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 435
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYN 519
DY T + M+ + +T N + ++ + +FK P TTYN
Sbjct: 436 DY--VTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYN 493
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK----- 572
L+ D+ ++++++MRT G PN S+++L+ GN+ G I K
Sbjct: 494 ALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGG 553
Query: 573 -------IMR-----------------------EDGMSPDVVAYTTAIKVCVRSKRLKQA 602
I+R G +PD+V + + + + ++ +
Sbjct: 554 TVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKV 613
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+F+ +K + P+L+TY +L+ ++ E ++ L
Sbjct: 614 TEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKIL 652
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 183/450 (40%), Gaps = 64/450 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ + T+I C G ++ A +EDL+++ T + +N+L+ V +T L V
Sbjct: 242 PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV 301
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG------------------------NTVLAQEIY 347
K M++ G D +YN L AG NTV+ Y
Sbjct: 302 LKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTA--Y 359
Query: 348 GEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
G + ++ K +V TY+ I+ + + + L++ +M +G TPN
Sbjct: 360 GNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+TW++++ C G+ + + E M G E + N L+ A AF+++
Sbjct: 420 VTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 479
Query: 459 WTLSKTQVALGEDYDGNTDRISNM-EHKDKQSITN---TPNFVPNSH-YS---------- 503
T + L Y+ + +S + QSI + T F PN YS
Sbjct: 480 MTSAGFAPCL-TTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGG 538
Query: 504 ------SFDKRFSFKPTTTTYNILMKAC-----CTDYYRVKALMNEMRTVGLSPNHISWT 552
+ +K ++ IL C ++ E++ G +P+ + +
Sbjct: 539 NIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFN 598
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ +G +I +++ G+SPD++ Y + + + + +A + ++K
Sbjct: 599 SMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSS 658
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Q++P++V+Y T++ + G + E Q+ L+
Sbjct: 659 QVKPDVVSYNTVINGFCKQGLIKEAQRILS 688
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 51/264 (19%)
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G + ++++++A + AG E+A+ LF E+ + G P N++L
Sbjct: 165 LPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVL--------- 215
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D R+ RSW VAL ++ R + +E
Sbjct: 216 DVYGRMGRSW---PRIVALLDEM-----RAAGVE-------------------------- 241
Query: 510 SFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T + ++ ACC D A +++ G +P +++ L+ G +GN A
Sbjct: 242 ---PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEA 298
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L++LK M +DG PD V Y R+ ++A + M + PN TY T++ A
Sbjct: 299 LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTA 358
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
YG++ +V + LA++ M K+G
Sbjct: 359 ---YGNIGKVDEALALFDQMKKSG 379
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K R L +A+ K +P++ I +++ + G Y K I++ ++ ++ ++
Sbjct: 571 KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNILLKACCLAGNTVLAQEIYGE 349
+NSLM++ A + E K + +L V D+ SYN ++ C G AQ I E
Sbjct: 631 TYNSLMDMYAK-CSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSE 689
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ A G+ V TY T+V +A + + A +V M+ + P +T+ ++++
Sbjct: 690 ---MIADGMAPC-VVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYC 745
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
A E+A E+ + + + + L A +E QF R
Sbjct: 746 KAKRFEEARSFLSEVSETDPNFDKKVLHT-LAAYIEDAQFGR 786
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 553 ILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ A G G + +L M G DV AYTT + R+ R ++A LF E++
Sbjct: 142 MVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRR 201
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P LVTY +L R G + +A+ +M AG
Sbjct: 202 QGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMRAAG 239
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 191/461 (41%), Gaps = 83/461 (18%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGEDY---------------DG--NTDRISNMEHKDKQSITNTP 494
+ Q+ LG DG T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM----WK 649
+ PNLVTY TL+R Y +L V Q + ++ M WK
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKGWK 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 156/373 (41%), Gaps = 31/373 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E L S+ N+ + +L+N A D+ + ++ G+ D +Y + C A
Sbjct: 61 ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + +G L+ FTY+ ++ A + A+ V M + P+
Sbjct: 121 GMLTHACRVF---VLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T ++++++ AG E+A L EE + G EPN N L+ A + + A ++F
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 458 SWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSF 505
++ T++ G G +R S M + T + +
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 506 DKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ +F+ P T+++L+ A C + + + G+ N + +T
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G ++ A ++++ M +G PD +Y++ I R K+L QA + E+M
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 613 QIQPNLVTYITLL 625
IQ + VTY ++
Sbjct: 417 GIQASPVTYTIII 429
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
PN +LL+ V+ D + + W ++ + +YD
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDI---WKIADMKDLQESNYD 564
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 185 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 298
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 415
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 416 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 46/416 (11%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 30 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 79
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 135
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 136 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 195
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTD--YYRVKAL 535
PN V S +S + S P T+N L+ A + + + L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDG 427
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 162/348 (46%), Gaps = 17/348 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 257
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 373
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 374 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 427
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 532
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 404
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 405 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 496
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 497 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 536
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 537 SGTYNTLIRAHLRDGDKAASAELIREMR 564
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 177/405 (43%), Gaps = 30/405 (7%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P+ +I+D G+C G + ++ ++ + +N + +N+L++ ++
Sbjct: 42 TPDTVTFNSIMD--GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ G + D+ +Y+IL C G E + VK + G ++ TY+T
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRI---DEAFELVKEMSGNGCTP-NLVTYNT 155
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + A ++ E ++S+G P+ +T++ +++ G +++A+ + E ML+ G
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ L++ + D A +F+ +SK A Y +S + K
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEM-VSKDCTADALAY------VSLVNGYCKS 268
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
S T V + + P YN LM C + + + +M G P
Sbjct: 269 SRTKEAQKVVDGIRGT--------PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 320
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++ I++D G V+ A L+ M G PDVV+Y I ++ + K+A +
Sbjct: 321 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++M I P+ VTY TL+ +++ + + ++M KAG
Sbjct: 381 DQMIQAGIPPDAVTYNTLM---AQFCKEERFDDAVGILKNMIKAG 422
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 56/290 (19%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVFTY+ ++ A A ++ +M+ GVTP+T+T++S+++ AG E+A L
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 422 EEMLQAGCEPNSQCC--NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
M + C P+ CC N L+ + DRA L + S
Sbjct: 69 AVMAERNCRPS--CCTYNTLISGLCKQQNVDRAKTLVDEFVSS----------------- 109
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
F P TY+IL C +A L+
Sbjct: 110 ------------------------------GFVPDVVTYSILADGLCKRGRIDEAFELVK 139
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM G +PN +++ LID + E A ++L+ + G PDVV YT + +
Sbjct: 140 EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEG 199
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
RL +A + E M P+++TY L+ R G + E ++++M
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH---IFKEM 246
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 161/377 (42%), Gaps = 39/377 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ED+ + NI +N +M+ + ++M G + D+ SYNI++
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A+++ ++ + + D TY+T++ F + + A+ + ++M+ AGV
Sbjct: 369 KASKPKEARQVLDQM----IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC---NILLQACVEACQFDRA 452
P+ +T+++LI+ + + A L EML+ GC S C I+ + C E C +A
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV-SACTTYNTIIDRLCKEGC-LKQA 482
Query: 453 FRLFRSWTLSKTQVALGEDYDGNT-------DRISNMEHKDKQSITNTPNFVPNSHYSSF 505
L T G + NT DR+ D+ S S S
Sbjct: 483 LLLMDHMT--------GHGVEANTVTYNIFIDRLCKEGRLDEAS----------SLLSEM 524
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-GLSPNHISWTILIDACGGSGNV 564
D TT L KA D R L EM V GL ++ +LIDA + +
Sbjct: 525 DTLRDEVSYTTVIIGLCKAEQLD--RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 582
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ AL +L++M + G SP V+ Y I + ++ +A+ LF+EM I + V+Y L
Sbjct: 583 DEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642
Query: 625 LRARSRYGSLHEVQQCL 641
+ G E Q L
Sbjct: 643 IYGLCGQGRGKEALQVL 659
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 159/392 (40%), Gaps = 62/392 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ K M G ++ +YN L+ C A T A E+ ++ L + G + DV TY+
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL---LETLVSSGFVP-DVVTYTI 190
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IV ALK+ E ML G TP+ IT+++L+ G V++A H+F+EM+
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDY--DGNTDRISNM- 482
C ++ L+ ++ + A ++ R AL + Y +G D I N+
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 310
Query: 483 -EHKDKQSITN--TPNFVPNS--HYSSFDKRFSF---------KPTTTTYNILMKAC--C 526
+ + + N T N V + + D+ F F P +YNI++
Sbjct: 311 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 370
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + ++++M G+ P+ +++ L+ + A+ ILK M + G+ PD V Y
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430
Query: 587 TTAIKVCVRSKRL------------------------------------KQAFSLFEEMK 610
T I ++ RL KQA L + M
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ ++ N VTY + + G L E L+
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 138/327 (42%), Gaps = 53/327 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + V D+ +YNIL+ C A T A E+ E+ +GV D T+++I+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD---RGVTP-DTVTFNSIMDGLC 56
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A ++ A + M P+ T+++LI+ V++A L +E + +G P+
Sbjct: 57 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV 116
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+IL + + D AF L + + GN TP
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMS-------------GN---------------GCTP 148
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
N V TYN L+ C KA L+ + + G P+ +++T
Sbjct: 149 NLV-------------------TYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I++D G ++ AL++++ M + G +P V+ YT ++ R+ R+ +A +F+EM
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + Y++L+ + E Q+
Sbjct: 250 DCTADALAYVSLVNGYCKSSRTKEAQK 276
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 41/384 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ + R++ID G+C G+ ++ A++ + + + N+ ++N+L+ N +
Sbjct: 354 PDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M + G++ ++ ++NIL+ C G A G VK + +KG D+FT++ +
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD---GLVKVMISKGYFP-DIFTFNIL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ + AL++ + ML GV P+ T++SL+N E M ++ M++ GC
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNME 483
PN NILL++ + D A L ++ +++ V G DG N D
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL----- 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
+ Y+ F K + +T TYNI++ A + + L E
Sbjct: 583 ---------------DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M L P+ ++ +++D +GNV + L M E+G P + I R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYI 622
+ +A + M + P V I
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 167/418 (39%), Gaps = 61/418 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R KK D+ + D K PN++ I G+C G+ + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGC 276
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT-LEVY-KNMQKLGVMADMASYNILLKACCLAGN 339
L Q ++ +N+L+ + KF EVY M G+ D +YN L+ C G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA+ I G+ G + D FTY +++ AL + + L G+ PN I
Sbjct: 337 VQLAERIVGDAVF---NGFVP-DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRS 458
+++LI +N G++ +A L EM + G P Q NIL+ C C D +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-------A 445
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L K ++ G + P T+
Sbjct: 446 DGLVKVMISKG-----------------------------------------YFPDIFTF 464
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ T AL ++ M G+ P+ ++ L++ + E ++ K M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G +P++ + ++ R ++L +A L EEMK+ + P+ VT+ TL+ + G L
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 167/393 (42%), Gaps = 42/393 (10%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ C + G + + ++ + + V+L + FN L+ V D+K ++
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-----KLDVFTYST 368
+ K GV+ ++ +YN+ ++ C G E+ G V+ + G L K DV TY+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRG------ELDGAVRMV---GCLIEQGPKPDVITYNN 291
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +Q A M++ G+ P++ T+++LI G+V+ A + + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ L+ + +RA LF ALG+ N + + +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNE--------ALGKGIKPNVILYNTL----IK 399
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-----CCTDYYRVKALMNEMRTVG 543
++N + + ++ P T+NIL+ C +D L+ M + G
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ ++ ILI +E AL+IL +M ++G+ PDV Y + + ++ + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ M PNL T+ LL + RY L E
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 193/468 (41%), Gaps = 68/468 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ +G+K + A+ ++ + P ++ I+ V G + ++ +Y +R + +
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 288 TLNIYVF--------------------NSL------MNVNAH--------DLKFTLEVYK 313
T ++Y F N++ MNV A+ + F E Y+
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+ GV ++++N LL+ C G+ +++ +V +GVL ++FTY+ +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK---RGVLP-NLFTYNLFI 258
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+ A+++ ++ G P+ IT+++LI C N+ E ++L +M+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL-GKMVNEGL 317
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR--ISNMEHKDK 487
EP+S N L+ + A R+ + G D T R I + H+ +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN------GFVPDQFTYRSLIDGLCHEGE 371
Query: 488 QSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
N + F++ KP YN L+K ++A L NEM G
Sbjct: 372 T----------NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P ++ IL++ G V A ++K+M G PD+ + I +++ A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + M + P++ TY +LL + +V + Y+ M + G
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME---TYKTMVEKG 526
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 154/352 (43%), Gaps = 36/352 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V+ +M+ G+ A + Y ++ C G A + + E+ G+L ++ Y +
Sbjct: 728 QVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHL---IDFAESDGILLNNISLYVNV 784
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + K WQ A V ++ +T + W++LI A A +G E+A +F M++ G
Sbjct: 785 IEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGP 844
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSKTQVALGED---YDGNTDRISN 481
P N LLQA + + D + + + + +SK+ + L D GN +
Sbjct: 845 SPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKK 904
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
+ H K + + PT Y ++ + V+A+++EM
Sbjct: 905 IYHGMKAA--------------------GYFPTMHLYRVMARLLSRGKQVRDVEAMLSEM 944
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ W ++ + +Q+ + ++EDG+ PD Y T I + R R
Sbjct: 945 EEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRP 1004
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ FSL EM+ ++P L TY +L+ + +G V+Q +++++ G
Sbjct: 1005 EEGFSLMHEMRVAGLEPKLDTYKSLV---ASFGKQQLVEQAEELFEELQSKG 1053
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 191/432 (44%), Gaps = 30/432 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
C V+ G++ AL Y+ + +H SPN + TI+ V G + ++ +
Sbjct: 188 LCFVVKSVGQE-SWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVF--M 244
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ N + V+N++M V A +F E+ M++ G D+ S+N L+ A AG
Sbjct: 245 RAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGA 304
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ LA E+ EV+ + L+ D TY+T++ + A + A KV +DM + P+
Sbjct: 305 MMPNLAIELLNEVR----RSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPD 360
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ GL +A LF ++ G P++ N LL A ++ ++
Sbjct: 361 LWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWE 420
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ G+D + + + +M K Q N + Y P T
Sbjct: 421 EMV----KIGFGKD-EMTYNTMIHMYGKQGQ------NELALQLYRDMQSS-GRNPDAVT 468
Query: 518 YNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y +L+ + +M+EM G+ P +++ LI +G A + M
Sbjct: 469 YTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCML 528
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PD +AY+ + + +R K+A +L++EM H I + Y +LR + +
Sbjct: 529 RSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVE 588
Query: 636 EVQQCLAVYQDM 647
++ + V +DM
Sbjct: 589 DIGR---VIRDM 597
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 29/279 (10%)
Query: 204 KPD-------VNLAIRYACIVPRADILFCNFVREFGKKRDLVS----------------A 240
KPD +N ++ ++P I N VR G + D ++ A
Sbjct: 286 KPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEA 345
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ +D + H P+++ +I V G CG K+ ++ DL S+ + +NSL+
Sbjct: 346 AKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYA 405
Query: 301 NAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
A + ++ E+++ M K+G D +YN ++ G LA ++Y + +++ G
Sbjct: 406 FAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLY---RDMQSSG- 461
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
D TY+ ++ A V +ML+ GV P T+S+LI A AG +A
Sbjct: 462 RNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAE 521
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
F+ ML++G P+ +++L + + RA L++
Sbjct: 522 ETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYK 560
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 160/401 (39%), Gaps = 58/401 (14%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N+ + +I+ G + K+ ++ +LR + +T++ V+N+L+ A + ++
Sbjct: 777 NISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIF 836
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G + + N LL+A + G E+Y V+ L+ G K+ + ++
Sbjct: 837 NTMMRDGPSPTVDTINGLLQALIVDGRL---DELYVVVQELQDMG-FKISKSSILLMLDA 892
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
FA A K+ M +AG P + + + V + EM +AG +P+
Sbjct: 893 FARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N +L+ V F + ++++ RI
Sbjct: 953 LSIWNSVLKMYVAIEDFRKTIQVYQ--------------------RI------------- 979
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHIS 550
K +P TYN L+ C D+ + +LM+EMR GL P +
Sbjct: 980 --------------KEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDT 1025
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ L+ + G VE A ++ + ++ G D Y T +K+ S +A LF MK
Sbjct: 1026 YKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMK 1085
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P + T L+ + YGS + Q+ V ++ + G
Sbjct: 1086 DAGVEPTIATMHLLMVS---YGSSGQPQEAEKVLSNLKETG 1123
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 54/293 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG--LVEQAMHL 420
V Y+ ++ V+A + ++ + M G P+ +++++LINA AG + A+ L
Sbjct: 254 VQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIEL 313
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E+ ++G P++ N L+ AC A + A ++F
Sbjct: 314 LNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVF-----------------------D 350
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNE 538
+ME +H+ +P TYN ++ C + + L N+
Sbjct: 351 DME----------------AHHC--------QPDLWTYNAMISVYGRCGLSGKAEQLFND 386
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ + G P+ +S+ L+ A GNVE +I + M + G D + Y T I + + +
Sbjct: 387 LESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQ 446
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A L+ +M+ P+ VTY L+ + G +++ + V +M G
Sbjct: 447 NELALQLYRDMQSSGRNPDAVTYTVLIDS---LGKTNKIAEAAGVMSEMLNTG 496
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 145/353 (41%), Gaps = 55/353 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG 319
++D G+ + + IY +++ T+++Y + + ++ + M++ G
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAG 948
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D++ +N +LK + ++Y +K + L+ D TY+T++ ++
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIK----EDGLEPDEDTYNTLIVMYCRDHRP 1004
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M AG+ P T+ SL+ + LVEQA LFEE+ GC+ + + +
Sbjct: 1005 EEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTM 1064
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ + +A RLF
Sbjct: 1065 MKIYRNSGSHSKAERLF------------------------------------------- 1081
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
S K +PT T ++LM + + +A +++ ++ G + + + ++ +IDA
Sbjct: 1082 ----SMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDA 1137
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+G+ +Q L M+++G+ PD +T I+ S+R +A L ++
Sbjct: 1138 YLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQ 1190
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 139/351 (39%), Gaps = 53/351 (15%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
F + ++ + Y K P M++ R + + A+ ++ +
Sbjct: 893 FARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952
Query: 291 IYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++NS+ M V D + T++VY+ +++ G+ D +YN L+ C +E +
Sbjct: 953 LSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHR---PEEGFS 1009
Query: 349 EVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G+ KLD TY ++V F + + A ++ E++ S G + + +++
Sbjct: 1010 LMHEMRVAGLEPKLD--TYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
N+G +A LF M AG EP ++L+ + + Q A ++
Sbjct: 1068 YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKV------------ 1115
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+SN++ T + V +++ + D YNI ++
Sbjct: 1116 -----------LSNLKETGSNLSTLPYSSVIDAYLRNGD-----------YNIGIQKLI- 1152
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+M+ GL P+H WT I A S A+ +L +++ G
Sbjct: 1153 ----------QMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAG 1193
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 42/417 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I + ++R E++ ++N+T N+ + L++ + + +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K V +YN L+ C A A E Y ++ + G + D+FTY+T++
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAER---ASEAYDLLEEMVYSGCIP-DIFTYTTLIT 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CE 430
F +K AL+V E +++ G P+ +T+S LI+ G +++A+ LF M+++G C
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNTDR 478
PN+ N L+ + D A L + T L + D D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 479 ISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTTTYNILM 522
++ M K TP+ V + H +R S PT TYN ++
Sbjct: 279 LNQMTRKGL-----TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + + PN +S+ I+I A+++++ R +PD
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
VV YTT I R K++ +A ++ +M + PN +TY TL+ G L +
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRAR 450
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 143/359 (39%), Gaps = 61/359 (16%)
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
AD +Y L++ C A G+ + +KG DV+TY+ ++
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGK---MVSKG-FHPDVYTYTAVIHALCVENRLHE 64
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM----------------------- 418
A K E+M + +TPN +T++ LI+ G V++A+
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 419 -----------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
L EEM+ +GC P+ L+ ++ + D A R+F VA
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL------VA 178
Query: 468 LGEDYDGNT-----DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
G D T D + E + K++I + K S P T TYN L+
Sbjct: 179 RGFRPDVVTYSCLIDGLCK-EGRLKEAI---------DLFGRMIKSGSCMPNTVTYNSLI 228
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C +A L+ M G SP+ +++T L++ ++ A +L M G++
Sbjct: 229 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV +T+ + R RL A + EM+ P + TY T+L R L E ++
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 163/423 (38%), Gaps = 73/423 (17%)
Query: 240 ALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
A AYD ++ + S P+++ T+I G C A ++E L ++ ++ +
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLIT--GFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L++ LK ++++ M K G M + +YN L+ C G A + +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ DV TY+T++ F A + M G+TP+ +T++SL++
Sbjct: 249 ETGSSP----DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+H+ EM + C P N +L A Q + A R + L +
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCP---- 356
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
P ++NI+++ C
Sbjct: 357 -----------------------------------------PNVVSFNIMIRGLCKVNRS 375
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTT 588
+A L+ E R +P+ + +T +ID V+ A ++ K++ E G P+ + Y+T
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
I + L +A E+ PN+ TY L+ A + + ++ L DM
Sbjct: 436 LITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL---DDMV 488
Query: 649 KAG 651
+ G
Sbjct: 489 QRG 491
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
FC R DL++ + ++K L+ P++ +++D G+C + S A++ +
Sbjct: 266 FCKLAR-LDDAYDLLNQM-----TRKGLT-PDVVTFTSLMD--GLCRENRLSDAVHILGE 316
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDL----KFTLEVYKNMQKLGVMADMASYNILLKACC 335
+R ++ + +Y +N++++ A+ L KF LE ++ ++ S+NI+++ C
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE------EMDCPPNVVSFNIMIRGLC 370
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGV 394
+ A E+ E + DV Y+T++ K A +V ML G
Sbjct: 371 KVNRSSEAMELVEEARRRRCNP----DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
PN+IT+S+LI NAG++++A E+ GC PN N+L+ A
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDA 470
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S + +++T LI +E AL L M G PDV YT I RL +A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EEM + + PN+VTY L+ + G + E
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDE 99
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 137/362 (37%), Gaps = 65/362 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y+ + L K+GRL+E A+ + ++ G S + ++ + SG R G++D +
Sbjct: 188 YSCLIDGLCKEGRLKE-AIDLFGRMIKSG--SCMPNTVTYNSLISGFC---RMGKMDEAM 241
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
+L+++ E G +P +V + LM + LD+
Sbjct: 242 NLLERMAETGSSP-----------------------DVVTYTTLMNGF----CKLARLDD 274
Query: 194 EFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
+ ++ K PDV + F + + ++ L A+ ++
Sbjct: 275 AYDLLNQMTRKGLTPDV--------------VTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNAHDLK 306
SP +Y TI+D G C A L + N+ FN L VN
Sbjct: 321 SCSPTVYTYNTILD--GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRS--S 376
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + ++ D+ Y ++ C A +Y K LE G L + TY
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR--KMLEEPGCLP-NSITY 433
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST++ +A A + G PN T++ LI+A A E A L ++M+Q
Sbjct: 434 STLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Query: 427 AG 428
G
Sbjct: 490 RG 491
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 64/352 (18%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++++NV + + F LM V A + + M+ D +++IL+ C
Sbjct: 120 MKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERR 179
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQE + +K + DV Y+ +V+ + A A +V +M AG+ PN
Sbjct: 180 ASQAQEFFDSLK-----DKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVY 234
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S +I++ G + +A +F EML AGC+PNS N L++ V+A + ++ +++
Sbjct: 235 TYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQM 294
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KR +P T TYN
Sbjct: 295 -----------------------------------------------KRLGCEPDTVTYN 307
Query: 520 ILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEGALQILKI 573
L++ C D + L + ++ +GL +PN ++ L G+V A ++ K
Sbjct: 308 FLIETHCKD----ENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKK 363
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M+E + V Y T +K+ V SK L EM +I+PN+ TY L+
Sbjct: 364 MKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLI 415
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 42/268 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ N VR + + ++ A R + K PN+Y +ID CG ++ I+ +
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILL-------- 331
+ N +NSLM +V A + L+VY M++LG D +YN L+
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 332 -------------KAC------------CLA--GNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K C C+A G+ A +Y ++K L + +
Sbjct: 319 LEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEA----NTV 374
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++K+F +K M LK+K +M + PN T+ LI G A F EM
Sbjct: 375 TYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREM 434
Query: 425 LQAGC-EPNSQCCNILLQACVEACQFDR 451
+ C P+ +++LQ +A Q +
Sbjct: 435 IDEKCLRPSLPVYDMVLQQLRKAGQLKK 462
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T T+ ILM+ +A+ N M P+ I+++ILI A +
Sbjct: 128 TVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFF 187
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
++ D PDV+ YT ++ R+ + +A +F EMK I+PN+ TY ++ + R
Sbjct: 188 DSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRC 246
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G ++ + ++ +M AG
Sbjct: 247 G---QITRAHDIFAEMLDAG 263
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 189/459 (41%), Gaps = 79/459 (17%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
A+K+HL+S P+ Y + V G C M + A ++ + + + + +
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSF--VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ + A ++ + V+ M+ D Y ++ C AG T A+ +
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEV----LLEEA 203
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ ++ Y+ ++ + +A + ALKV E M +PN T++ LI+ +G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLS-- 462
E+AM LF M++AG EPN L+Q AFRL WT S
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 463 -----------KTQVALGE-----------------DYDGNTDRISNMEHKDKQSITNTP 494
+ Q+ LG D T +I + ++ I+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE-- 381
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWT 552
FVP++H +Y+ L+ C +A ++ +M G+ + +++T
Sbjct: 382 GFVPDAH---------------SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
I+ID EG +I M G++PD+V YT ++ R++ A S+ +M
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PNLVTY TL+R Y +L V Q + ++ M G
Sbjct: 487 GVFPNLVTYNTLIRG---YANLGLVSQAFSTFEVMVGKG 522
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 159/369 (43%), Gaps = 12/369 (3%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE-- 310
N + ++ID G+C G + + + + S+ + + ++SL++ K +
Sbjct: 351 NEVVYTSLID--GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M + G+ A +Y I++ + ++I+ + + A G+ D+ TY+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK---MIATGI-NPDIVTYTVFV 464
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + + A + M+ GV PN +T+++LI AN GLV QA FE M+ G +
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN +LL+ V+ D + +++ + QV L + + +++ + +
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCL 584
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
H+ + + P+ Y ++ CC A L++ M G P+
Sbjct: 585 CRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHL 644
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S+ I+I + GN A ++ + + D + + I ++ + + SL
Sbjct: 645 ESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSV 704
Query: 609 MKHYQIQPN 617
MK + QP+
Sbjct: 705 MKEHGYQPS 713
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 156/373 (41%), Gaps = 31/373 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E L S+ N+ + +L+N A D+ + ++ G+ D +Y + C A
Sbjct: 61 ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ + +G L+ FTY+ ++ A + A+ V M + P+
Sbjct: 121 GMLTHACRVF---VLMPLRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T ++++++ AG E+A L EE + G EPN N L+ A + + A ++F
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 458 SWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNSHYSSF 505
++ T++ G G +R S M + T + +
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 506 DKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ +F+ P T+++L+ A C + + + G+ N + +T
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID +G ++ A ++++ M +G PD +Y++ I R K+L QA + E+M
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Query: 613 QIQPNLVTYITLL 625
IQ + VTY ++
Sbjct: 417 GIQASPVTYTIII 429
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 159/367 (43%), Gaps = 33/367 (8%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN L+ A ++ + M G+ D+ + NIL+ + C A + ++
Sbjct: 70 FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L L+ D T++T+++ AL + + M+ G PN +T+ +LIN
Sbjct: 130 KLG----LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 185
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G A+ L M Q C+P+ ++ + + Q AF LF +G+
Sbjct: 186 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM--------VGQG 237
Query: 472 YDGNTDRISNMEHK-----DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ +++ H + + +T N + NS P ++ ++ A C
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS---------KIMPDVVIFSTVVDALC 288
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A +++ M G+ PN +++ L+D ++ A+++ M +G +P+V+
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
+Y T I + +R+ +A LFEEM ++ PN VTY TL+ G L Q +A++
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL---QDAIALF 405
Query: 645 QDMWKAG 651
+M G
Sbjct: 406 HEMVAHG 412
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 167/382 (43%), Gaps = 28/382 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C G + +++ + + N+ + +L+N + + + ++M++
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 205
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ Y ++ + C A ++ + + +G+ D+FTY++++ + W+
Sbjct: 206 DVVVYTSIIDSLCKDRQVTEAFNLFSK---MVGQGI-SPDIFTYTSLIHSLCNLCEWKHV 261
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ M+++ + P+ + +S++++A G + +A + + M+ G EPN N L+
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A ++F + + + Y+ + ++ DK +
Sbjct: 322 HCLQSEMDEAVKVFDTMVHNGYAPNV-ISYNTLINGYCKIQRMDKATYL----------- 369
Query: 503 SSFDK--RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDA 557
F++ + P T TYN LM C R++ AL +EM G P+ ++ IL+D
Sbjct: 370 --FEEMCQKELIPNTVTYNTLMHGLC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+++ A+ +LK + M PD+ YT I R+ L+ A +F + ++PN
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 486
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
+ TY ++ R G L E +
Sbjct: 487 VRTYTIMINGLCRRGLLDEANK 508
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 169/414 (40%), Gaps = 63/414 (15%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + ++ P++ + +IID +C D + A ++ + Q ++ +I+ + S
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIID--SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 247
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ N + K + M +M D+ ++ ++ A C G A ++ V +
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV---VDMMI 304
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+GV + +V TY+ ++ A+KV + M+ G PN I++++LIN +
Sbjct: 305 IRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 363
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
++A +LFEEM Q PN+ N L+ + A LF VA G+
Sbjct: 364 DKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM------VAHGQ---- 413
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RV 532
P TY IL+ C +
Sbjct: 414 -------------------------------------IPDLATYRILLDYLCKKSHLDEA 436
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
AL+ + + P+ +TI+ID +G +E A I + G+ P+V YT I
Sbjct: 437 MALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 496
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT----LLRARSRYGSLHEVQQCLA 642
R L +A LF EM P+ TY T LL+ + ++ +Q+ LA
Sbjct: 497 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 550
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 163/393 (41%), Gaps = 57/393 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII-DVCGICGDYMKSRAIYE 280
+++ + + K R + A + SP+++ ++I +C +C ++ +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC-EWKHVTTLLN 266
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ +F+++++ + K T +V M GV ++ +YN L+ CL
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 326
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A +++ + H G +V +Y+T++ + + A + E+M + PNT
Sbjct: 327 EMDEAVKVFDTMVH---NGYAP-NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++L++ + G ++ A+ LF EM+ G P+ ILL + D A L +
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK- 441
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
T SNM+ P Y
Sbjct: 442 -----------------TIEGSNMD-----------------------------PDIQIY 455
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
I++ C + + + + + + GL PN ++TI+I+ G ++ A ++ M
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+G SPD Y T + +++K +A L +EM
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N ++ A+ F ML P++ N LL + + Q+ F +LS + G
Sbjct: 44 NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVF------SLSNQMDSFG 97
Query: 470 EDYDGNTDRI--SNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
D T I ++ H N P F +S K + +P T T+ L++
Sbjct: 98 IPPDVYTLNILINSFCH------LNRPGFA----FSVLAKILKLGLQPDTATFTTLIRGL 147
Query: 526 CTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + AL ++M G PN +++ LI+ GN A+++L+ M + PDV
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YT+ I + +++ +AF+LF +M I P++ TY +L+ +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHS 251
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A+ + H P++ R ++D ++ A+ + + N+ +I ++
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+++ A +L+ +++ N+ G+ ++ +Y I++ C G A +++ E ++
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME---MD 514
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
G D TY+TI + K A+++ ++ML+ G + + T + L+ + L
Sbjct: 515 GNGC-SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 573
Query: 415 EQAMHLFEEMLQ 426
+ + E +Q
Sbjct: 574 QSVKQILSEFVQ 585
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 176/392 (44%), Gaps = 37/392 (9%)
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE-DLRSQNVTLNIY-----VFNSLMN 299
A K+ + N + C ++ V Y+K+R + + L Q+ N++ +N+LMN
Sbjct: 92 AGKQSKFTHNRFTCNNLLSV------YVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMN 145
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
A D+K L ++ M+ G+ A + S+NI+L+ C G +A E++ ++ G
Sbjct: 146 GFFKAGDVKKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMS-----G 199
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ ++ +Y+ ++ ++ A+ + + M+ + P+ +T+ +LI+ V++A
Sbjct: 200 IFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEA 259
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
LFEE GC P N ++ + + + A L+ + L D +
Sbjct: 260 YDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMV---REPHLKPDMFTYSA 316
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN 537
I+ + +++N + D S P TYN L+ C KA M
Sbjct: 317 LINGL------NLSNRGEKAYELYEEMLDTGCS--PDVVTYNTLLDGLCKSGCEDKA-ME 367
Query: 538 EMRTVGLS----PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
R +G+ PN I++T+LID + A+++ K M + PD V +TT I+
Sbjct: 368 IFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKL 427
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ R+ +A LFE + +P+ V + T+L
Sbjct: 428 CKESRIDEAHELFESIGK-TCKPDSVLFNTML 458
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + GK+R + A ++ ++ P + T+ID CG + +Y+D
Sbjct: 241 VTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDD 300
Query: 282 L-RSQNVTLNIYVFNSLMN-VN-AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ R ++ +++ +++L+N +N ++ + E+Y+ M G D+ +YN LL C +G
Sbjct: 301 MVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG 360
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A EI+ + + V +V TY+ ++ F A+K+ ++M + P+
Sbjct: 361 CEDKAMEIF---RKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+T++++I +++A LFE + + C+P+S N +L + + D A +L
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKL 473
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 511 FKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGL------------------------ 544
F+P +YN LM D + AL EM+ G+
Sbjct: 133 FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWE 192
Query: 545 ---------SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
SPN IS+TI+ID S V+ A+ + K M + + PDVV Y I +
Sbjct: 193 VFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+R+K+A+ LFEE + P +VTY T++ + G ++ L +Y DM
Sbjct: 253 QRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG---RIENALTLYDDM 301
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 126/335 (37%), Gaps = 58/335 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ +ID G ++ ++E+ R++ + +N++++ ++ L +
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297
Query: 312 YKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
Y +M ++ + DM +Y+ L+ L+ A E+Y E+ DV TY+T++
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP----DVVTYNTLL 353
Query: 371 KVFADAKWWQMALKVKEDMLSAGV-TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+++ M V PN IT++ LI+ + A+ L +EM
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P++ ++Q + + D A LF S + KT
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFES--IGKT------------------------- 446
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
KP + +N ++ C T K L + M G +P
Sbjct: 447 ---------------------CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++T L+ +G AL + M E G P+
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 195/453 (43%), Gaps = 39/453 (8%)
Query: 207 VNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC 266
+ LAI C + R ++L + + +G + A D ++H S + I +I +
Sbjct: 625 LRLAISQGCELDRENLL--SILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIM- 681
Query: 267 GICGDYMKSRAIYEDLRSQNVTL---NIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVM 321
+C + A+ E ++++ L + ++ SL+ + F +++ +M+ GV
Sbjct: 682 -LCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 740
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
Y ++ C G A + + E KG+L DV ++ +++ + K WQ
Sbjct: 741 PSDHLYRSMVVTYCKMGFPETAHYL---IDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 797
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A + + + W++LI+A A +G E+A +F M++ G P N L+Q
Sbjct: 798 AESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 857
Query: 442 ACVEACQFDRAFRLFR-----SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
A + + D + + + + +SK+ + L D + I F
Sbjct: 858 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI----------------F 901
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
Y K + PT Y I++ A V+A+++EM P+ W +
Sbjct: 902 EVKKIYQGM-KAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSV 960
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+ G G+ + Q+ ++++E G+ PD Y T I + R +R ++ SL EM+ +
Sbjct: 961 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 1020
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P L TY +L+ A +G L V+Q +++ +
Sbjct: 1021 EPKLDTYKSLISA---FGKLQMVEQAEELFEGL 1050
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 195/433 (45%), Gaps = 32/433 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G+ AL Y+ + +H SPN + TI+ V G + I+
Sbjct: 188 FCFVVKWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-- 244
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ N + V+N++M V A +FT E+ M+ G D+ S+N L+ A +G
Sbjct: 245 RAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGT 304
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V LA E+ EV+ + ++ D+ TY+T++ + + A+KV DM++ P+
Sbjct: 305 MVTNLAIELLNEVR----RSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 360
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ G+ +A LF+++ G P++ N LL A D+ +
Sbjct: 361 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 420
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK-PTTT 516
++ G+D + + I +M K Q + + YS D + S + P
Sbjct: 421 D----MVKMGFGKD-EMTYNTIIHMYGKRGQ------HDLAFQLYS--DMKLSGRSPDAV 467
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY +L+ + +A +M+EM + P +++ LI +G A + M
Sbjct: 468 TYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCM 527
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G+ PD +AY+ + + +R +A L++EM + +P+ Y +LR +
Sbjct: 528 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 587
Query: 635 HEVQQCLAVYQDM 647
+V + V +DM
Sbjct: 588 EDVHK---VVKDM 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+R + I P DI+ N + ++ +L A++ Y+ H P+++ +I V G C
Sbjct: 317 VRRSGIQP--DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRC 374
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G ++ +++DL S+ + +NSL+ A + + E+ ++M K+G D +Y
Sbjct: 375 GMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTY 434
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ G LA ++Y ++K L + D TY+ ++ A + A +V
Sbjct: 435 NTIIHMYGKRGQHDLAFQLYSDMK-LSGRSP---DAVTYTVLIDSLGKANMIKEAAEVMS 490
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML+A V P T+S+LI A AG +A F+ ML++G +P+ +++L +
Sbjct: 491 EMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 550
Query: 448 QFDRAFRLFRSWTL 461
+ +A +L++ L
Sbjct: 551 ESGKAMKLYQEMVL 564
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 160/389 (41%), Gaps = 49/389 (12%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY---KN 314
+ +I G Y ++RAI+ + + + N LM D + E+Y +
Sbjct: 816 VWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLD-ELYVVIQE 874
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK--------HLE-------AKG-- 357
+Q +G +S ++L A AGN ++IY +K HL AKG
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKR 934
Query: 358 --------------VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
K D+ +++++K++ ++ +V + + AG+ P+ T+++
Sbjct: 935 VRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNT 994
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI E+ + L EM + G EP L+ A + ++A LF LSK
Sbjct: 995 LILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEG-LLSK 1053
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ DR + H + N+ N K +PT T ++LM
Sbjct: 1054 ---------ECKLDR--SFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1102
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ +A +++ ++ GL + + ++ +IDA +G+ A+Q L M++DG+ P
Sbjct: 1103 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1162
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
D +T ++ S+ +A L + ++
Sbjct: 1163 DHRIWTCFVRAASLSQHTSEAIVLLKALR 1191
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVK----ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+P ++N L+ A V L+NE+R G+ P+ I++ LI AC N+E A
Sbjct: 286 EPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEA 345
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++ M PD+ Y I V R ++A LF++++ P+ VTY +LL A
Sbjct: 346 VKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA 405
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G++ +V++ + +DM K G
Sbjct: 406 FAREGNVDKVKE---ICEDMVKMG 426
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 177/423 (41%), Gaps = 52/423 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK SA+R +D K++ P I T++ + G ++ + +
Sbjct: 232 VTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHE 291
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + +Y + L+ + ++ VYKNM K G D+ N L+ +
Sbjct: 292 MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDR 351
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNT 398
A E++ E++ L +V TY+TI+K +F D A E M GV P++
Sbjct: 352 LKEAVELFEEMRLLNCTP----NVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSS 407
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+S LI+ VE+A+ L EEM + G P L+ + +A +++ A LF+
Sbjct: 408 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQE 467
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L E+ ++ R+ Y+ K F
Sbjct: 468 ---------LKENCGSSSVRV----------------------YAVMIKHF--------- 487
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
C + L NEM+ +G P+ ++ LI + ++ A + + M E+G
Sbjct: 488 -----GKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PD+ ++ + R+ K+A +F +MK I+P+ V+Y T+L SR G E
Sbjct: 543 CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEAT 602
Query: 639 QCL 641
+ +
Sbjct: 603 KLM 605
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+YN ++ G+ E+Y E + ++G D TYS ++ F A++
Sbjct: 196 GTYNSVILMLMQEGHHEKVHELYNE---MCSEGHCFPDTVTYSALISAFGKLNRDDSAVR 252
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ ++M G+ P +++L+ G VE+A++L EM C P L++
Sbjct: 253 LFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLG 312
Query: 445 EACQFDRAFRLFRSWTLS--KTQVALGEDYD---GNTDRISN-MEHKDKQSITN-TPNFV 497
++ + + A+ ++++ K V L + G +DR+ +E ++ + N TPN V
Sbjct: 313 KSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVV 372
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY---RVKALMNEMRTVGLSPNHISWTIL 554
TYN ++K+ D + + M+ G+ P+ +++IL
Sbjct: 373 -------------------TYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + VE AL +L+ M E G P AY + I ++KR + A LF+E+K
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ Y +++ +G + + ++ +M K G
Sbjct: 474 SSSVRVYAVMIK---HFGKCGRFNEAMGLFNEMKKLG 507
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 136/354 (38%), Gaps = 72/354 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P +Y +I G G + +Y+++ ++ + N+L+N+ + LK +E+
Sbjct: 299 PTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVEL 358
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ L ++ +YN ++K+ L + E ++ ++ GV+ FTYS ++
Sbjct: 359 FEEMRLLNCTPNVVTYNTIIKS--LFEDKAPPSEASSWLERMKKDGVVP-SSFTYSILID 415
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA-------------------- 411
F + AL + E+M G P + SLIN+ A
Sbjct: 416 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSS 475
Query: 412 ---------------GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +AM LF EM + GC P+ N L+ V A D AF LF
Sbjct: 476 SVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLF 535
Query: 457 RSWTL--------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
R+ S + G G R M K K S
Sbjct: 536 RTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSS------------------- 576
Query: 509 FSFKPTTTTYNILMKACCTD---YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ KP +YN ++ C + + LM EM + G + I+++ +++A G
Sbjct: 577 -TIKPDAVSYNTVL-GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVG 628
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + +A + K++ S ++ + +I G CG + ++
Sbjct: 439 PPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMG 498
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ +++ ++Y +N+L+ V A + +++ M++ G D+ S+NI+L
Sbjct: 499 LFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLA 558
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E++ ++K +K D +Y+T++ + A ++ A K+ ++M S G
Sbjct: 559 RTGGPKRAMEMFAKMK----SSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFE 614
Query: 396 PNTITWSSLINACA 409
+ IT+SS++ A
Sbjct: 615 YDLITYSSILEAVG 628
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLS-PNHISWTILIDACGGSGNVEGAL 568
+PT TYN ILM + +V L NEM + G P+ ++++ LI A G + A+
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M+E+G+ P YTT + + + ++++A +L EM+ + P + TY L+R
Sbjct: 252 RLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGL 311
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G V+ VY++M K G
Sbjct: 312 GKSG---RVEDAYGVYKNMLKDG 331
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 163/379 (43%), Gaps = 55/379 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--T 308
L N+ + T+I C G ++ +YE + S+ +++ ++ LM+ +F
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ + M++ G ++ +Y+ LL + C G + + + + AKG ++ Y+
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNG---MWDDARAMLDQMLAKG-FSMNSQGYNG 423
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
I+ A ++ ++M S G P+ T++++I N L+E+A H+F +++ G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N N L+ A + ++ RL L Q+ D IS
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL----------DVIS-------- 525
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSP 546
YN L+KA C + R AL+ EM T G+ P
Sbjct: 526 -----------------------------YNGLIKALCKEGNVDRSMALLEEMVTKGIKP 556
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N+ S+ +LI+ +G V AL++ K M G++PD+V Y T I + A +L
Sbjct: 557 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616
Query: 607 EEMKHYQIQPNLVTYITLL 625
E++ + + P++VTY L+
Sbjct: 617 EKLPNENVHPDIVTYNILI 635
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 34/318 (10%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N +++ C G A E+Y + + +KG DV TYS ++ + A+++ +
Sbjct: 317 NTVIRGCLTEGKLARATELY---EMMGSKGCPP-DVHTYSILMHGLCKLGRFGSAVRMLD 372
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G PN +T+S+L+++ G+ + A + ++ML G NSQ N ++ A +
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNT--------DRISNMEHKDKQSITNTPNFVPN 499
+ D+A RL + K+Q + NT D + EH + I V N
Sbjct: 433 KLDQATRLVQEM---KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE--GVVAN 487
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
TYN L+ A + + L +EM G + IS+ LI A
Sbjct: 488 G---------------ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GNV+ ++ +L+ M G+ P+ +Y I ++ +++ A L +EM + + P+
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592
Query: 618 LVTYITLLRARSRYGSLH 635
+VTY TL+ + G H
Sbjct: 593 IVTYNTLINGLCKVGWTH 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 26/324 (8%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R D ++ +PN+ T++ G + +RA+ + + ++ ++N +N ++
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D K + + M+ G D+ +YN ++ C N L +E ++L +
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC---NNDLMEEAEHIFRNLIEE 482
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV+ + TY+T++ WQ L++ +ML G + I+++ LI A G V++
Sbjct: 483 GVVA-NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
+M L EEM+ G +PN+ N+L+ E C +A ++ + LSK + G D T
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLIN---ELC---KAGKVRDALELSKEMLNQGLTPDIVT 595
Query: 477 -DRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
+ + N K + N +PN + P TYNIL+ C
Sbjct: 596 YNTLINGLCKVGWTHAALNLLEKLPNE---------NVHPDIVTYNILISWHCKVRLLDD 646
Query: 534 A--LMNEMRTVGLSPNHISWTILI 555
A L+++ + G+ PN +W +++
Sbjct: 647 AAMLLDKAISGGIVPNERTWGMMV 670
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 165/426 (38%), Gaps = 65/426 (15%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
G+ D ++ LR +H P+ + +T+I G ++ + +++
Sbjct: 189 RLGRAGDALALLRGM---ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ FN L+ ++ + M G M + +Y LL+ C A +
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G + +++V +T+++ A ++ E M S G P+ T+S L++
Sbjct: 306 GRLP--------EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHG 357
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G A+ + +EM + GC PN + LL + +D A R L+K
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA-RAMLDQMLAK---- 412
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
F + YN ++ A C
Sbjct: 413 ------------------------------------------GFSMNSQGYNGIIYALCK 430
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D +A L+ EM++ G P+ ++ +I + +E A I + + E+G+ + +
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGIT 490
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y T I +R+ R ++ L EM + Q ++++Y L++A + G+ V + +A+ +
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN---VDRSMALLE 547
Query: 646 DMWKAG 651
+M G
Sbjct: 548 EMVTKG 553
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 100/272 (36%), Gaps = 22/272 (8%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ A A AL + ML V P T T+ A G A+ L M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ GC P++ ++ A V A L L +G D NT +
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL------MGCAADVNTFNDLVLGL 257
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
+ V D+ + P+ TY L++ C R + +
Sbjct: 258 CGLGRVREAARLV--------DRMMTQGCMPSVVTYGFLLQGLC----RTRQADEACAML 305
Query: 543 GLSP--NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P N + +I C G + A ++ ++M G PDV Y+ + + R
Sbjct: 306 GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFG 365
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
A + +EM+ PN+VTY TLL + R G
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 196/459 (42%), Gaps = 74/459 (16%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKN 314
+ RT++DV G ++ + +++R +++ V +LM ++ L ++K
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
K G++ Y +L++ C G T Q+ Y + + +G+L F S ++K
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMT---QKAYELCRQMTGQGLLP-STFELSLVLKGLL 378
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + W+ A+ + E+M +G+ P+ T+++LI+ A + +A++LF+ M +AG +P+
Sbjct: 379 NDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Query: 435 CCNILLQA-CVEACQFDRAFRLFRSW-------------TLSKTQVALGEDYDGNTDRIS 480
N LL C + C D A +L+ TL + +A +D+D +
Sbjct: 438 TYNSLLMGYCKKGC-MDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA-KKDFDNAYALLD 495
Query: 481 NMEHKDKQSITNTPNFVPNS--------HYSSFDKRF---SFKPTTTTYNI--------- 520
M+ T N + N K F F PT TYN
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555
Query: 521 LMKACCTDYYRVK----------------------------ALMNEMRTVGLSPNHISWT 552
+M + T Y +++ ++N++R GL P+ +++
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LI+ GN+ ALQ+L I+ +DG++P+ V Y + I +K+ +E M
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I + TY TL+ S+ G+ V L +Y +M G
Sbjct: 676 GIVADTSTYTTLIDGFSKDGN---VAFALELYSEMMAKG 711
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 30/411 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+ N + + L AL +D KK P++ +++ G C G ++ +Y +
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL--MGYCKKGCMDEAVKLYSE 461
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N+ + +LM + D + M++ GV + +YN+L+ C+
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
E+ G +K ++G + + TY++I+ F A A V + M G+ PN I
Sbjct: 522 VC---EVDGMLKSFMSEGFIPT-MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++S I+ G + A+ + ++ + G +P+ N L+ + A +L
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL--- 634
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTT 516
+ L + NT +++ IT N S F + + T+
Sbjct: 635 -----VILLKDGLAPNTVVYNSL-------ITGYKNLNMMKEVSKFYESMIKGGIVADTS 682
Query: 517 TYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY L+ D AL +EM G P+ ++T L SG+++GA ++L+ M
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
R + P+V Y I +R +L++AF L +EM + IQP+ TY L+
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 42/331 (12%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+ A+GV+ D+ + + ++ A + AL + +M G + + +L++AC
Sbjct: 147 HMVARGVVP-DIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------------ 459
G+ E A+ LF+EM A +P+ + + + A + RA R+ R
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265
Query: 460 -TLSKTQVALG--EDYDGNTDRISNMEHKD--------------KQSITNTPNFVPNSHY 502
T+ V G E+ D + + K +Q + N N +
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL- 324
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
+ PT Y +L++ C KA L +M GL P+ ++++
Sbjct: 325 -----KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLN 379
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+ A+ + + M + G+ PDV Y I ++ +L++A +LF+ MK ++P++ T
Sbjct: 380 DRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y +LL + G + E + +Y +M G
Sbjct: 439 YNSLLMGYCKKGCMDEA---VKLYSEMPMEG 466
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE + + + + +L++ + D + F LE+Y M G + D ++ L C
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G+ A+++ E++ L+ ++ +VF Y+ ++ + Q A ++ ++ML+ G+
Sbjct: 728 RSGDIDGAKKLLEEMRRLD----VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQ 783
Query: 396 PNTITWSSLIN 406
P+ T+ L++
Sbjct: 784 PDDTTYDILVS 794
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 170/429 (39%), Gaps = 54/429 (12%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL+ + + P++ I ++D + IY +++ + LN+Y +N L+
Sbjct: 127 ALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLK 186
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE------------ 345
+ + ++ M G + D SY ++ + C G A+E
Sbjct: 187 ALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVY 246
Query: 346 ---IYGEVKHLEAKGVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
I G + + + V +L DV TYST++ ++ +MAL V M
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC------VE 445
G +PN T++SL+ G + +A+ L+ M+Q G EPN+ N L+ VE
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + + T L + + D + E +K ITN
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM-ITN------------- 412
Query: 506 DKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P Y ++ C + + L+ M PN I++ I SG
Sbjct: 413 ----GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGK 468
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E A+++L MR+ G +P+V Y + +KR ++A + E++ +I+ NLVTY T
Sbjct: 469 TEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNT 528
Query: 624 LLRARSRYG 632
+L G
Sbjct: 529 ILSGFCHAG 537
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 29/311 (9%)
Query: 364 FTYSTIVKVFA---DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
TY+T++K D Q L++ M G++ N + +INA AGL EQA+
Sbjct: 74 LTYTTMIKRLGYERDIDGIQYLLQL---MKLEGISCNEDLFVIVINAYRRAGLAEQALKT 130
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLSKTQVAL-- 468
F + + GC+P+ + N +L A + +F ++ + +T + AL
Sbjct: 131 FYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCK 190
Query: 469 GEDYDGNTDRISNMEHK----DKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILM 522
+ D ++ M +K D S T + + + S K YN L+
Sbjct: 191 NDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALI 250
Query: 523 KACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C ++ V L NEM G+ P+ I+++ +I+ GNVE AL +L M G S
Sbjct: 251 NGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS 310
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+V +T+ +K RL +A L+ M +PN V Y TL+ YG + E
Sbjct: 311 PNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEA--- 367
Query: 641 LAVYQDMWKAG 651
++V Q M + G
Sbjct: 368 VSVSQKMERNG 378
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
+ + F K DLV A ++ + PN+ + ++DV +C + M + A++ E+
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV--LCRNSMFNHALHLIEN 443
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N N FN+ + + ++ ++V M++ G ++ +YN +L A
Sbjct: 444 MANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKR 503
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A +I GE++ +E +K ++ TY+TI+ F A ++ AL++ +L G P++I
Sbjct: 504 TREALQIVGEIEEME----IKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSI 559
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG 428
T++++I A G V+ A+ L + + + G
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK +V A+ +++ PN T+ID GD + + I+ + + N
Sbjct: 361 YGK---MVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417
Query: 291 IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ V+ +++V + F L + +NM + ++N +K C +G T A ++
Sbjct: 418 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+++ +V TY+ ++ +AK + AL++ ++ + N +T++++++
Sbjct: 478 QMRQYGCAP----NVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGF 533
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+AG+ + A+ + ++L G +P+S N ++ A + + A +L T
Sbjct: 534 CHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLT 585
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 490 ITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ N PN + H+ S SFK T TY ++K D ++ L+ M+ G+S
Sbjct: 47 LKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISC 106
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + I+I+A +G E AL+ + E G P V Y + + + + ++
Sbjct: 107 NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIY 166
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
MK I+ N+ TY LL+A + + ++ LA
Sbjct: 167 NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLA 202
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P I F F++ A++ + +++ +PN+ ++D ++
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
I ++ + N+ +N++++ H K L++ + G D +YN ++ A C
Sbjct: 510 IVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYC 569
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ V L KG DVFTY++++ + A+ + M++ G+
Sbjct: 570 KQGEVKTAIQL---VDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGIC 626
Query: 396 PNTITWSSLINACANAGLVEQAMHL 420
PN TW++L+ GL + HL
Sbjct: 627 PNRATWNALVR-----GLFSKLGHL 646
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 20/311 (6%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG D SY L+ C G T A ++ ++ ++ K +++L+ Y+T++ K
Sbjct: 154 LGFHLDQVSYGTLIHGLCKVGETRAALDL---LQRVDGK-LVQLNAVMYNTVIYGMCKDK 209
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A + +M+S G++PN +T+S+LI+ G ++ A+ LF +++ +P+ N
Sbjct: 210 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 269
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQSITNTPNF 496
IL+ + + +F + + + + Y+ D + E +SI NT
Sbjct: 270 ILVDGFCKDRKMKEGKTVF-AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM-- 326
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
+ P +YNIL+ C KA L NEM + PN +++ L
Sbjct: 327 ----------AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID SG + ALQ++ M + G+ P+++ Y + I ++ ++ +A +L + K I
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436
Query: 615 QPNLVTYITLL 625
QP++ TY L+
Sbjct: 437 QPSMYTYTILI 447
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 155/398 (38%), Gaps = 75/398 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SPN+ +I + G + ++ + +N+ + Y FN L++ D +K
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G++ D+ +YN L+ CL A+ I+ + A+G + D+ +Y+ ++
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM----AQGGVNPDIRSYNILI 342
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K A+ + +M + PN +T++SLI+ + +G + A+ L ++M G
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 402
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N ++ A + Q D+A L + KD+
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKF-------------------------KDQ--- 434
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
+P+ TY IL+ C + G +
Sbjct: 435 -------------------GIQPSMYTYTILIDGLC-------------KVEGYDITVNT 462
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++I G + AL +L M++ P+ V Y I+ + + +A LF EM
Sbjct: 463 YNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM- 521
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+T L R+ S S ++ Q L + Q W
Sbjct: 522 --------ITRGLLNRSASYPCSSMKIHQSLTMVQHTW 551
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 124/308 (40%), Gaps = 41/308 (13%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K++ +YS+ F A+ + +L TP ++ ++ + + +
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 420 LFEEMLQAGCEPNSQCCNILL----QACVEACQFDRAFRLFR----SWTLSKTQVALGED 471
L ++M G +PN CNIL+ Q + CQ +AF LF + QV+ G
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAF-LFHDKLVALGFHLDQVSYGTL 166
Query: 472 YDG------NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
G + ++ D + + + YN ++
Sbjct: 167 IHGLCKVGETRAALDLLQRVDGKLV---------------------QLNAVMYNTVIYGM 205
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C D + A L +EM + G+SPN ++++ LI G ++ A+ + + + + PD
Sbjct: 206 CKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDG 265
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + + +++K+ ++F M I P++VTY +L+ Y + EV ++
Sbjct: 266 YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG---YCLVKEVNTAKSI 322
Query: 644 YQDMWKAG 651
+ M + G
Sbjct: 323 FNTMAQGG 330
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 174/421 (41%), Gaps = 39/421 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
EFG D A++ + +KKH C+ +++ M + Y ++
Sbjct: 174 EFGYVSD---AIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPP 230
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+Y FN LMN +K ++ ++K G+ S+N L+ C +GN +E +
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN---LEEGF 287
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+E V DVFTYS ++ + A + ++M G+ PN +T+++LIN
Sbjct: 288 RLKMVMEEFRVFP-DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT------- 460
G V+ A+ ++++M G + + N L+ + F A + T
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406
Query: 461 -LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ T + G +G+ + M + + N +
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN--------------------VAFT 446
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C D V A + EM GL P+ ++T+++D G+V+ ++LK M+ D
Sbjct: 447 AIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD 506
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P V+ Y + + ++K A L M + + P+ +TY LL+ ++G L +
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDF 566
Query: 638 Q 638
Q
Sbjct: 567 Q 567
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 152/357 (42%), Gaps = 30/357 (8%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
+EG++ + ++ + G+ P + S L+ C+ SG +E L V+EEF
Sbjct: 244 KEGKVKDAQLIFDEIRKTGLQPTAV---SFNTLINGYCK----SGNLEEGFRLKMVMEEF 296
Query: 185 RLPVKELDEEFRIVQLC--VNKPDVNLAIRYAC---IVPRADILFCNFVREFGKKRDLVS 239
R+ I LC D N + C +VP D+ F + K +
Sbjct: 297 RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPN-DVTFTTLINGQCKNGRVDL 355
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL Y ++ + T+ID G+C G + ++R ++ + + + + + +L
Sbjct: 356 ALEIYQQMFTKGLKADLVLYNTLID--GLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413
Query: 298 MNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ + DL+ LE+ K M K G+ D ++ ++ C G V A+ E+
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM----L 469
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+ LK D TY+ ++ F +M K+ ++M S G P IT++ L+N G V+
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
A L ML G P+ NILLQ C+ + + KT++ L DY
Sbjct: 530 NADMLLNAMLNLGVVPDDITYNILLQG---HCKHGK----LGDFQNVKTEMGLVSDY 579
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 52/273 (19%)
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+AL+ ++L +G PN T++ L+N G V+ A +F+E+ + G +P + N L+
Sbjct: 215 VALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
++ + FRL ++ + E
Sbjct: 275 NGYCKSGNLEEGFRL---------KMVMEE------------------------------ 295
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
F P TY+ L+ C + A L EM GL PN +++T LI+
Sbjct: 296 --------FRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQ 347
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
+G V+ AL+I + M G+ D+V Y T I + ++A EM + P+
Sbjct: 348 CKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDK 407
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TLL + G L + L + ++M K G
Sbjct: 408 FTYTTLLDGSCKEGDL---ELALEMRKEMVKEG 437
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 131/572 (22%), Positives = 247/572 (43%), Gaps = 62/572 (10%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y ++ L K GRL+E E +V + VS S+++ + +G++K + +CV
Sbjct: 294 YNNIIHGLCKSGRLDEAYRFKEKMVKEK--VS--PSLITYSVFINGLIKLEKIDEANCV- 348
Query: 134 GVLKKLNELGVAPLELFDGS---GFKLLKNECQRL------LDSGEVEMFVGLMEVLEEF 184
LK+++ELG P E+ + G+ + N + L L G V L +++ F
Sbjct: 349 --LKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGF 406
Query: 185 RLP-----VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + EE L +N+ ++ I + C+ R + +F+RE L+
Sbjct: 407 CKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF-VTALHFIREM-----LLR 460
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
LR PN + T+ V G+C G ++ ++ L + NI N+L
Sbjct: 461 NLR-----------PNDGLLTTL--VSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL 507
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ A +++ TL++ ++M + G++ D +YN L+ CC G +E + E+K
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK---VKEGF-ELKEEMV 563
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K ++ D++T++ ++ +A A ++ + G PN T+ +I+ A VE
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVE 623
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+ +L E++ E NS N L++A + AFRL R S+ + Y
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRL-RDDMKSRGVLLSCATYSSL 682
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVK 533
+ N+ D H ++ P Y ++ +V
Sbjct: 683 MHGLCNIGLVDDA-----------KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ EM + + PN ++TI+ID G + A ++L M E G+ PD V Y
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ ++++AF + +EM + + +TY TL+
Sbjct: 792 CKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 187/443 (42%), Gaps = 34/443 (7%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF-----GKKRDLVSALRAYDASK 248
F I Q+ D NL V AD+L + +F G D+ S L +K
Sbjct: 163 HFEIAQIMA---DFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLL-----AK 214
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLK 306
K L P++ C ++ + KS +Y+ + + ++++F++++N H
Sbjct: 215 KGLF-PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHRED 273
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ ++ M+KLGV ++ +YN ++ C +G E Y K K + + TY
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRL---DEAY-RFKEKMVKEKVSPSLITY 329
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S + + A V ++M G PN + +++LI+ G + +A+ + ++ML
Sbjct: 330 SVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLS 389
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G PNS N L+Q ++ Q +A + +G N S + +
Sbjct: 390 KGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM--------IGRGLPINQGSFSMVIN-- 439
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG--L 544
+ FV H+ + +P L+ C + +A+ R +G
Sbjct: 440 --WLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF 497
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++ LI +GN++ L++L+ M E G+ D + Y T I C + ++K+ F
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFE 557
Query: 605 LFEEMKHYQIQPNLVTYITLLRA 627
L EEM IQP++ T+ LL
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHG 580
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 188/439 (42%), Gaps = 41/439 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
VP ++++ + + K ++ AL+ D SPN ++I G C +
Sbjct: 358 VPN-EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQ--GFCKSDQIGQ 414
Query: 277 A--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLK 332
A + E++ + + +N F+ ++N +F L + M + + L+
Sbjct: 415 AENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVS 474
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C AG A E++ L KG + ++ T + ++ A Q LK+ DML
Sbjct: 475 GLCKAGKQGEAVELWCR---LLGKGFVP-NIVTSNALIHGLCKAGNMQETLKLLRDMLER 530
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G+ + IT+++LI+ C G V++ L EEM++ G +P+ N+LL A + D A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590
Query: 453 FRLFRSWTLSKTQVALGEDY------DG--NTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
RL W K + Y DG +++ E+ + ++
Sbjct: 591 SRL---WHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK------------ 635
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
+ + YN L++A C + A L ++M++ G+ + +++ L+ G
Sbjct: 636 -----KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ A +L MR++G+ P+VV YTT I + ++ + + +EM + I PN TY
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750
Query: 623 TLLRARSRYGSLHEVQQCL 641
++ + G E + L
Sbjct: 751 IMIDGFCKLGKTKEAAKLL 769
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 24/232 (10%)
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A +F + + G P+ + C LL + V+A + +++ ++ L + D +
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLG----GIIPDVHLFS 260
Query: 477 DRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DY 529
I+ H++ +I +S +K P TYN ++ C +
Sbjct: 261 TMINAFCKGHREDDAI---------GLFSKMEK-LGVAPNVVTYNNIIHGLCKSGRLDEA 310
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K M + + +SP+ I++++ I+ ++ A +LK M E G P+ V Y T
Sbjct: 311 YRFKEKMVKEK---VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTL 367
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
I + + +A + ++M I PN VT +L++ + + + + L
Sbjct: 368 IDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVL 419
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M + + +Y I++ C G T A ++ E + KG+L D TY+
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE---MTEKGILP-DAVTYNAFT 788
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ A KV ++M S V + IT+++LI+ C
Sbjct: 789 NGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826
>gi|440794290|gb|ELR15456.1| pentatricopeptide repeat domain/PPR repeatcontaining protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 551
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 180/435 (41%), Gaps = 93/435 (21%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTL 309
++ I T+I + GD+ + A+ + +R + + + + +L+ + H L
Sbjct: 62 DVAIFSTLIKIFAAGGDWARCEALMQHMRDEKIKPTVVTYTNLLKYCERVESWHKAAEVL 121
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E K + G+ D+ Y ++ CC + A + E+++ +GV K ++FTY+++
Sbjct: 122 EQMK-AEAPGLKPDVVFYTAMVNVCCKRNDLTQALRVLAEMRN---EGV-KPNIFTYASL 176
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-G 428
V + K + AL + E+M + PN ++SLIN C + AM LF++M +
Sbjct: 177 VNICEREKNLKKALDLLEEMKDENIQPNVYIYTSLINVCEKKRDLVTAMKLFDDMTRLYR 236
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
PN+ N LL CVE DR +
Sbjct: 237 IRPNTFTFNSLLNVCVEKRDLDRGMEVL-------------------------------- 264
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
++ VPN T+T+N L C K L+ M+T G+SP
Sbjct: 265 ALMRQHQVVPN---------------TSTFNSLASLCAKTGNAAKGLELLATMKTTGVSP 309
Query: 547 NHISWTILIDACGG---SGN---------------------VEGALQIL-KIMREDGMSP 581
+++++T LI AC GN +E AL +L ++ RE ++P
Sbjct: 310 DNLTFTSLIAACRARDTEGNDAADTADSTAAQARESTASPPLEQALSLLDRMQREFNVAP 369
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMK-----HYQIQPNLVTYITLLRARSRYGSLHE 636
D + T + VC+RS+RL A + + K + +Q + Y L+ ++ G +
Sbjct: 370 DNITLITLMSVCLRSRRLGYALRAYGQAKAELARNRALQLDKENYYELVNLCAKNG---Q 426
Query: 637 VQQCLAVYQDMWKAG 651
++ L + DM AG
Sbjct: 427 WRRGLEIVSDMENAG 441
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 175/416 (42%), Gaps = 46/416 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+C V + K +++ ++A K P++ +++VC D ++ + ++R
Sbjct: 107 YCERVESWHKAAEVLEQMKAEAPGLK----PDVVFYTAMVNVCCKRNDLTQALRVLAEMR 162
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ V NI+ + SL+N+ +LK L++ + M+ + ++ Y L+ C + V
Sbjct: 163 NEGVKPNIFTYASLVNICEREKNLKKALDLLEEMKDENIQPNVYIYTSLINVCEKKRDLV 222
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ ++ L ++ + FT+++++ V + + ++V M V PNT T+
Sbjct: 223 TAMKLFDDMTRLYR---IRPNTFTFNSLLNVCVEKRDLDRGMEVLALMRQHQVVPNTSTF 279
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SL + CA G + + L M G P+ N+ + + AC+
Sbjct: 280 NSLASLCAKTGNAAKGLELLATMKTTGVSPD----NLTFTSLIAACR------------- 322
Query: 462 SKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D +GN D + + ++S + P S + F+ P T
Sbjct: 323 -------ARDTEGNDAADTADSTAAQARESTASPPLEQALSLLDRMQREFNVAPDNITLI 375
Query: 520 ILMKACCTD---------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
LM C Y + KA + R + L + + L++ C +G L+I
Sbjct: 376 TLMSVCLRSRRLGYALRAYGQAKAELARNRALQLDKEN--YYELVNLCAKNGQWRRGLEI 433
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ M G++P V Y + ++ ++ L+ A + M+ +++ + T + L R
Sbjct: 434 VSDMENAGLTPSVRIYNSFLRNFDPTQDLEDAKEVVRLMRSKEVEEDDTTKVLLRR 489
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN 537
++ ++ K++ S T N + ++ R F + I + A D+ R +ALM
Sbjct: 29 KVKDLSDKERMSAAQTLYERMNKLHDNYSARL-FDVAIFSTLIKIFAAGGDWARCEALMQ 87
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVAYTTAIKVCVR 595
MR + P +++T L+ C + A ++L+ M+ + G+ PDVV YT + VC +
Sbjct: 88 HMRDEKIKPTVVTYTNLLKYCERVESWHKAAEVLEQMKAEAPGLKPDVVFYTAMVNVCCK 147
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L QA + EM++ ++PN+ TY +L+ R +L + L +D
Sbjct: 148 RNDLTQALRVLAEMRNEGVKPNIFTYASLVNICEREKNLKKALDLLEEMKD 198
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 157/327 (48%), Gaps = 36/327 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++++M+K V + +YN L+ + C G A+ + +K D FTY+ ++
Sbjct: 70 IFESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKK-----YCDPDEFTYAALI 124
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F ++ L++ E+ML+ G+ PN ++ +++A + +G EQ + LFE M++ C
Sbjct: 125 NGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECR 184
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI--SNMEHKDKQ 488
P+ + +L++A + + D AF + + S+ LG Y+ +R+ +N H +
Sbjct: 185 PDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGA-YNTLMNRLGKANKAHAALE 243
Query: 489 ---SITNTPNFVP------------------NSHYSSFDK-RFSFKPTTTTYNILM---- 522
I + PN+ P + +S + K R F+P +YN L+
Sbjct: 244 IFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPDIFSYNTLLGRLG 303
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+A D + +++++M G+ + I++ IL++ +GN++ AL L+ M+ G SP
Sbjct: 304 RAGRVDLF--ASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSSGFSPT 361
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A + +++ R A ++ +EM
Sbjct: 362 PSALEVLVNSLLKAGRFGAAEAVVQEM 388
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 156/368 (42%), Gaps = 54/368 (14%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ ED+ S + + F ++M + DL L + + M + G S N+++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + D +T++T+V A + A+++ + ML G
Sbjct: 271 KEGRV---EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++S+I+ G V++A+ ++M+ C PN+ N L+ + Q + A L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T SK P
Sbjct: 388 ARVLT-SK----------------------------------------------GILPDV 400
Query: 516 TTYNILMKA-CCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N L++ C T +RV L EMR+ G P+ ++ +LID+ G ++ AL +LK
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G + V+ Y T I ++ ++++A +F+EM+ + + N VTY TL+ +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 634 LHEVQQCL 641
+ + Q +
Sbjct: 521 VEDASQLM 528
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 55/358 (15%)
Query: 292 YVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y FN+L+N A +K +E+ M + G D+ +YN ++ C G A E +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQ 355
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+ + + TY+T++ + A ++ + S G+ P+ T++SLI
Sbjct: 356 MITRDCSP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AM LFEEM GCEP+ N+L+ + + D A + + LS ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV- 470
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--T 527
TYN L+ C
Sbjct: 471 ----------------------------------------------ITYNTLIDGFCKAN 484
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + +EM G+S N +++ LID S VE A Q++ M +G PD Y
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ + R +K+A + + M +P++VTY TL+ + G + + L Q
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 174/386 (45%), Gaps = 35/386 (9%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ Y T+++ G+C G + I + + + ++Y +NS+++ ++K +
Sbjct: 293 PDQYTFNTLVN--GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E M + +YN L+ C A E+ + L +KG+L DV T++++
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL---ARVLTSKGILP-DVCTFNSL 406
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + ++A+++ E+M S G P+ T++ LI++ + G +++A+++ ++M +GC
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEH 484
+ N L+ +A + A +F + S+ V DG + R+ +
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQ 526
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTV 542
Q I KP TYN L+ C D + ++ M +
Sbjct: 527 LMDQMIMEGQ-----------------KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ +++ LI +G VE A ++L+ ++ G++ AY I+ R ++ +A
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEA 629
Query: 603 FSLFEEM-KHYQIQPNLVTYITLLRA 627
+LF EM + + P+ V+Y + R
Sbjct: 630 INLFREMLEQNEAAPDAVSYRIVFRG 655
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 151/409 (36%), Gaps = 89/409 (21%)
Query: 236 DLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
D +ALR ++ ASKK SP + I+ G G + R I ED+++ + F
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPF 121
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L +E Y + L EI G V +
Sbjct: 122 LIL-----------IESYAQFE-------------------------LQDEILGVVHWMI 145
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
LK D Y+ ++ + D ++ M G+ P+ T++ LI A A +
Sbjct: 146 DDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
A+ + E+M G P+ + ++Q +E D A R+ + Q+
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI-------REQMV------- 251
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
F + + N+++ C + RV+
Sbjct: 252 ---------------------------------EFGCSWSNVSVNVIVHGFCKEG-RVED 277
Query: 535 LMNEMRTV----GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+N ++ + G P+ ++ L++ +G+V+ A++I+ +M ++G PDV Y + I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ +K+A ++M PN VTY TL+ + + E +
Sbjct: 338 SGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 26/338 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN T+I ++ + L S+ + ++ FNSL+ + + +E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M+ G D +YN+L+ + C G E +K +E G + V TY+T++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKL---DEALNMLKQMELSGCAR-SVITYNTLI 477
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A + A ++ ++M GV+ N++T+++LI+ + VE A L ++M+ G +
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRISNMEHK 485
P+ N LL +A + ++ T + + V G G R+
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ P+++ F + TT N+ +R NE +
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINL---------FREMLEQNEA-----A 643
Query: 546 PNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPD 582
P+ +S+ I+ C G G + A+ L + E G P+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M++ GV AD +YN L+ C +G A + ++ + + ++ +V T++
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL---MRDMVMRDIVP-NVITFTA 190
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF + A+K+ E+M V P+ T++SLIN G V++A + + M+ G
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ ++ + D +LFR Q L D I +
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLVGDTITYNTIIQGYFQAGR- 305
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
P++ F R +P TY+IL+ C ++ KAL+ M+ +
Sbjct: 306 ---------PDAAQEIF-SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 355
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+I GNVE A + + + G+ PDVV+YTT I R ++ ++ L+
Sbjct: 356 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 415
Query: 607 EEMKHYQIQP 616
+M+ + P
Sbjct: 416 RKMQEDGLLP 425
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 160/389 (41%), Gaps = 74/389 (19%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V + + +DL +L + +M+ G+ D+ SYNI++ C V+A + G++
Sbjct: 16 VLSKIAKSKNYDLVISL--FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM-- 71
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
K + DV T S+++ F A+ + M G P+ + ++++I+ G
Sbjct: 72 --MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
LV A+ LF+ M + G ++ N L+ + ++ A RL R +
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR---------- 179
Query: 473 DGNTDRISNMEHKDKQSITNTPN---FVPNSHYSSFDK------RFSFKPTTTTYNILMK 523
D + N+ IT T FV +S K R P TYN L+
Sbjct: 180 ----DIVPNV-------ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 228
Query: 524 ACCTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C + RV K +++ M T G P+ +++ LI+ S V+ ++ + M + G+
Sbjct: 229 GLCM-HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287
Query: 581 PDVVAYTTAIK---------------------------------VCVRSKRLKQAFSLFE 607
D + Y T I+ +C+ + R+++A LFE
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM-NWRVEKALVLFE 346
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
M+ +I+ ++ TY ++ + G++ +
Sbjct: 347 NMQKSEIELDITTYNIVIHGMCKIGNVED 375
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+E G+ D+++Y+ ++ + +AL V M+ G P+ +T SSLIN
Sbjct: 35 HMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 93
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSK 463
V A+ L +M + G P+ N ++ + + A LF R+ ++
Sbjct: 94 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 153
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ G G R S+ + + + VPN +F T ++ +K
Sbjct: 154 NSLVAGLCCSG---RWSDAARLMRDMVMR--DIVPNV--------ITF---TAVIDVFVK 197
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L EM + P+ ++ LI+ G V+ A Q+L +M G PDV
Sbjct: 198 E--GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T I +SKR+ + LF EM + + +TY T+++ + G Q+ +
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 314
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN+ +IDV G + ++ +YE++ + V +++ +NSL +N + ++ K
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL--INGLCMHGRVDEAK 240
Query: 314 NMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M L G + D+ +YN L+ C + +++ E+ G D TY+TI
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTI 296
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A A ++ M S PN T+S L+ VE+A+ LFE M ++
Sbjct: 297 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRS 458
E + NI++ + + A+ LFRS
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRS 382
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+F ++P T + L+ C A L+++M +G P+ + + +ID G V
Sbjct: 73 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M DG+ D V Y + + S R A L +M I PN++T+ ++
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192
Query: 626 RARSRYGSLHEVQQCLAVYQDM 647
+ G E + +Y++M
Sbjct: 193 DVFVKEGKFSEA---MKLYEEM 211
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + +I+ FN +++ + K F ++ + M + G D+ SY IL+
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAG 393
AG A EI+ + + + D + +V A+ +A + V E++ SA
Sbjct: 160 FRAGKVTDAVEIWNAM----IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V +T+ +++LI+ AG +E+A L M + GCEP+ N+LL + RA
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S Q+ Y+ R + H DK P
Sbjct: 276 GVMAEMVRSGIQLD-AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD---------- 324
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y+ L++ C ++ + L EMR G+ N +++T LI A GN A ++L
Sbjct: 325 -VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+SPD + YTT + +S + +A+ +F +M ++I P+ ++Y +L+ R
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 632 GSLHEVQQCLAVYQDM 647
G V + + +++DM
Sbjct: 444 G---RVTEAIKLFEDM 456
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
YM DL + NV LN Y N++ LK V M + G+ D SYN LL
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNM-------LKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 332 KACCLAGNTVLAQEIYG-EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
K C + + Y VK +E +G DV +YST+++ F A + A ++ E+M
Sbjct: 298 KRHCRVSH---PDKCYNFMVKEMEPRGF--CDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ N +T++SLI A G A L ++M + G P+ +L ++ D
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 451 RAFRLF 456
+A+ +F
Sbjct: 413 KAYGVF 418
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 42/324 (12%)
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA+ IY ++K + L FTYS + K + + + DM + G P+ +
Sbjct: 62 LAEAIYWDMKPMG----FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAF 117
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ V A+ F M+Q G EP+ IL+ A + A ++ +
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177
Query: 462 SKTQ--------VALGEDYDGNTDRISNMEHKD-KQSITNTPNFVPNSHYSSFDK----- 507
S + +G + D M ++ K + V N+ S F K
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237
Query: 508 ----------RFSFKPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSPNHIS 550
+ +P TYN+L+ +YY R + +M EM G+ + S
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLL-----NYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 551 WTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ L+ C S + ++K M G DVV+Y+T I+ R+ ++A+ LFEEM
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
+ + N+VTY +L++A R G+
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGN 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + + +++ M++ G++ ++ +Y L+KA GN+ +A+++ ++ L L
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG----LSP 393
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+TI+ + A V DM+ +TP+ I+++SLI+ +G V +A+ LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M C P+ ++ + + A++++
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
K+ ++E++R + + +N+ + SL+ + ++ ++ M +LG+ D Y +L
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +GN A ++ ++ E + D +Y++++ + A+K+ EDM
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHE----ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +T+ +I + A ++++M+ G + + L++A
Sbjct: 459 KECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>gi|356529805|ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1092
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 57/348 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTL 309
PN++ +ID C G K+ Y +RS+NV + VFN+L+ A D F +
Sbjct: 528 PNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDV 587
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ + D + LLKAC AG A+E+Y V+ KG ++ Y+
Sbjct: 588 LAEMTAETQPIDPDHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEV----YTIA 643
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + W+ A V DM G+ P+ I S+LI+ +A ++ A + +E + G
Sbjct: 644 INSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEARKGGI 703
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ L+ AC A + +A L+
Sbjct: 704 LIGIMSYSSLMGACSNARNWQKALELYE-------------------------------- 731
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
+ K T +T N L+ A C KAL + EM+ +GL PN
Sbjct: 732 ---------------YLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLRPN 776
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I+++ILI A ++E A +L + ++DG+ P+++ I +C R
Sbjct: 777 SITFSILIVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCIIGMCQR 824
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 16/306 (5%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
++++N+L+ C + ++ E +V L L+ D Y+T++ A + +
Sbjct: 460 LSTFNMLMSVCASSQDS----EGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMF 515
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V M+++GV PN T+ +LI+ CA AG V +A + M +P+ N L+ AC
Sbjct: 516 EVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAAC 575
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
++ DRAF + T ++TQ D + I + ++ T
Sbjct: 576 AQSGALDRAFDVLAEMT-AETQ-----PIDPDHVTIGAL----LKACTKAGQVERAKEVY 625
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
++++ K Y I + +C D+ + N+M G+ P+ I + LID G +
Sbjct: 626 KMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHA 685
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A +L+ R+ G+ +++Y++ + C ++ ++A L+E +K ++ + T
Sbjct: 686 KKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTV 745
Query: 622 ITLLRA 627
LL A
Sbjct: 746 NALLTA 751
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 533 KALMNEMRTVGLSPNHI--SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
KA+ + L PN + ++ +L+ C S + EGA Q+L+++++ + PD YTT I
Sbjct: 443 KAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLYTTLI 502
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
C +S ++ F +F +M + ++PN+ TY L+ +R G +V + Y M
Sbjct: 503 LTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAG---QVAKAFGAYGIM 556
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 508 RFSFKPTTTTYNILMKACCTDY-----YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R P +T+N+LM C + ++V L+ + R L P+ +T LI C SG
Sbjct: 453 RLIPNPMLSTFNMLMSVCASSQDSEGAFQVLQLLKDAR---LEPDCKLYTTLILTCAKSG 509
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
V+ ++ M G+ P+V Y I C R+ ++ +AF + M+ ++P+ V +
Sbjct: 510 KVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFN 569
Query: 623 TLLRARSRYGSLHEVQQCLA 642
L+ A ++ G+L LA
Sbjct: 570 ALIAACAQSGALDRAFDVLA 589
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ ++M G+ PN ++ LID C +G V A IMR + PD V + I C
Sbjct: 517 VFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACA 576
Query: 595 RSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+S L +AF + EM + I P+ VT LL+A ++ G + ++ + Q
Sbjct: 577 QSGALDRAFDVLAEMTAETQPIDPDHVTIGALLKACTKAGQVERAKEVYKMVQ 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 116/306 (37%), Gaps = 58/306 (18%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K +E KG+L + ++ + K A+K D + P T++ L++ CA
Sbjct: 416 LKDMETKGLLDMTKVYHAKFFNICKKRK----AVKEAFDFIRLIPNPMLSTFNMLMSVCA 471
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
++ E A + + + A EP+ + L+ C ++ + D F +F S +
Sbjct: 472 SSQDSEGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVE---- 527
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
PN H TY L+ C
Sbjct: 528 ----------------------------PNVH---------------TYGALIDGCARAG 544
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED--GMSPDVVA 585
KA MR+ + P+ + + LI AC SG ++ A +L M + + PD V
Sbjct: 545 QVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDHVT 604
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+K C ++ ++++A +++ ++ Y I+ Y + + S+ G VY
Sbjct: 605 IGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAH---TVYN 661
Query: 646 DMWKAG 651
DM + G
Sbjct: 662 DMTQKG 667
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 167/404 (41%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 127 PDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + ++ Y+ ++ A C L E YG + KG+ DV TYST+
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALC---KYQLVSEAYGLFSEMTVKGI-SADVVTYSTL 240
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + PN T++ L++A G V++A + ML+A
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ + L+ + +A +F + +L
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL---------------------------- 332
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C + +AL EM + P
Sbjct: 333 -------------------MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ LID SG + ++ MR+ G DV+ Y++ I ++ L +A +LF
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+MK +I+PN+ T+ LL + G L + Q+ V+QD+ G
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE---VFQDLLTKG 474
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 168/408 (41%), Gaps = 62/408 (15%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 172 NGVCKIGDTRGAIKLLRKIDG---RLTKPNVEMYSTIID--ALCKYQLVSEAYGLFSEMT 226
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +++L+ LK + + M + ++ +YNIL+ A C G
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K DV TYST++ + + A V M GVTP+ T+
Sbjct: 287 EAKSVLA----VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ LIN +V++A++LF+EM Q P + L+ ++ R+ W L
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC------KSGRIPYVWDL 396
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G+ D TY+ L
Sbjct: 397 IDEMRDRGQPAD-----------------------------------------VITYSSL 415
Query: 522 MKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + + R AL N+M+ + PN ++TIL+D G ++ A ++ + + G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+V Y I + L++A ++ +M+ PN T+ T++ A
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 32/313 (10%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
LE KG+ + D+ T + ++ F V +L G P+T+T ++LI G
Sbjct: 85 LELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR--SWTLSKTQVALGE 470
V++A+H +++L G + N L+ + A +L R L+K V E
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV---E 200
Query: 471 DYDGNTDRISNMEHKDK-----QSITNTPNFVPNSHYSSFDKRF---------------- 509
Y D + + + +T YS+ F
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 510 ---SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ P TYNIL+ A C + K+++ M + P+ I+++ L+D V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + M G++PDV YT I ++K + +A +LF+EM + P +VTY +L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 625 LRARSRYGSLHEV 637
+ + G + V
Sbjct: 381 IDGLCKSGRIPYV 393
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 121/248 (48%), Gaps = 11/248 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
AC+ P I + + + ++ A ++A +P+++ +I+ G C + M
Sbjct: 298 ACVKPDV-ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 274 KSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ ++++ +N+ I ++SL++ + + + ++ M+ G AD+ +Y+
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C G+ A ++ ++K E ++ ++FT++ ++ + A +V +D+
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L+ G N T++ +IN GL+E+A+ + +M GC PN+ ++ A + +
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 450 DRAFRLFR 457
D+A +L R
Sbjct: 531 DKAEKLLR 538
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P + ++ID G+C G + +++R
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRIPYVWDLIDEMRD 402
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++SL++ N H L + ++ M+ + ++ ++ ILL C G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGH-LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG L+V+TY+ ++ + AL + M G PN T+
Sbjct: 462 DAQEVFQD---LLTKGY-HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
++I A ++A L +M+ G
Sbjct: 518 ETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMK--ACCTDYYRVKALMNEM 539
H SI N + V S F++ + P +N ++ A Y +L + +
Sbjct: 31 HSQPPSIQNVDDAV-----SQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I+ ILI+ G + +L + + G PD V T IK ++
Sbjct: 86 ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K+A +++ Q N V+Y TL+ + G
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 42/417 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +I + ++R E++ ++N+T N+ + L++ + + +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K V +YN L+ C A A E Y ++ + G + D+FTY+T++
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAER---ASEAYDLLEEMVYSGCIP-DIFTYTTLIT 158
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-CE 430
F +K AL+V E +++ G P+ +T+S LI+ G +++A+ LF M+++G C
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY------DGNTDR 478
PN+ N L+ + D A L + T L + D D
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 479 ISNMEHKDKQSITNTPNFVPNS----------------HYSSFDKRFSFKPTTTTYNILM 522
++ M K TP+ V + H +R S PT TYN ++
Sbjct: 279 LNQMTRKGL-----TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 523 KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C +A + + PN +S+ I+I A+++++ R +PD
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
VV YTT I R K++ +A ++ +M + PN +TY TL+ G L +
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR 450
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 143/359 (39%), Gaps = 61/359 (16%)
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
AD +Y L++ C A G+ + +KG DV+TY+ ++
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGK---MVSKG-FHPDVYTYTAVIHALCVENRLHE 64
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM----------------------- 418
A K E+M + +TPN +T++ LI+ G V++A+
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 419 -----------HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
L EEM+ +GC P+ L+ ++ + D A R+F VA
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL------VA 178
Query: 468 LGEDYDGNT-----DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
G D T D + E + K++I + K S P T TYN L+
Sbjct: 179 RGFRPDVVTYSCLIDGLCK-EGRLKEAI---------DLFGRMIKSGSCMPNTVTYNSLI 228
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C +A L+ M G SP+ +++T L++ ++ A +L M G++
Sbjct: 229 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV +T+ + R RL A + EM+ P + TY T+L R L E ++
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 163/423 (38%), Gaps = 73/423 (17%)
Query: 240 ALRAYDASKKHLSS---PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVF 294
A AYD ++ + S P+++ T+I G C A ++E L ++ ++ +
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLIT--GFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+ L++ LK ++++ M K G M + +YN L+ C G A + +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ DV TY+T++ F A + M G+TP+ +T++SL++
Sbjct: 249 ETGSSP----DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+H+ EM + C P N +L A Q + A R + L +
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA----RKFMLEEMDCP---- 356
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
P ++NI+++ C
Sbjct: 357 -----------------------------------------PNVVSFNIMIRGLCKVNRS 375
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDGMSPDVVAYTT 588
+A L+ E R +P+ + +T +ID V+ A ++ K++ E G P+ + Y+T
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ + L +A E+ PN+ TY L+ A + + ++ L DM
Sbjct: 436 LVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL---DDMV 488
Query: 649 KAG 651
+ G
Sbjct: 489 QRG 491
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
FC R DL++ + ++K L+ P++ +++D G+C + S A++ +
Sbjct: 266 FCKLAR-LDDAYDLLNQM-----TRKGLT-PDVVTFTSLMD--GLCRENRLSDAVHILGE 316
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDL----KFTLEVYKNMQKLGVMADMASYNILLKACC 335
+R ++ + +Y +N++++ A+ L KF LE ++ ++ S+NI+++ C
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE------EMDCPPNVVSFNIMIRGLC 370
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGV 394
+ A E+ E + DV Y+T++ K A +V ML G
Sbjct: 371 KVNRSSEAMELVEEARRRRCNP----DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
PN+IT+S+L+ NAG++++A E+ GC PN N+L+ A
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDA 470
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
S + +++T LI +E AL L M G PDV YT I RL +A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EEM + + PN+VTY L+ + G + E
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDE 99
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 137/362 (37%), Gaps = 65/362 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y+ + L K+GRL+E A+ + ++ G S + ++ + SG R G++D +
Sbjct: 188 YSCLIDGLCKEGRLKE-AIDLFGRMIKSG--SCMPNTVTYNSLISGFC---RMGKMDEAM 241
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
+L+++ E G +P +V + LM + LD+
Sbjct: 242 NLLERMAETGSSP-----------------------DVVTYTTLMNGF----CKLARLDD 274
Query: 194 EFRIVQLCVNK---PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKH 250
+ ++ K PDV + F + + ++ L A+ ++
Sbjct: 275 AYDLLNQMTRKGLTPDV--------------VTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN----SLMNVNAHDLK 306
SP +Y TI+D G C A L + N+ FN L VN
Sbjct: 321 SCSPTVYTYNTILD--GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRS--S 376
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + ++ D+ Y ++ C A +Y K LE G L + TY
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR--KMLEEPGCLP-NSITY 433
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
ST+V +A A + G PN T++ LI+A A E A L ++M+Q
Sbjct: 434 STLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Query: 427 AG 428
G
Sbjct: 490 RG 491
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 178/438 (40%), Gaps = 67/438 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--Y 279
I + + F K RD A R D +K P+ + TII G+C + A+ Y
Sbjct: 34 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK--GLCDNGRVDSALVHY 91
Query: 280 EDLRSQN----VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
D++ +T I V + D LE +M + G ++ +YN L+ C
Sbjct: 92 RDMQRHCAPSVITYTILVDALCKSARISDASLILE---DMIEAGCAPNVVTYNTLINGFC 148
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
GN A ++ ++ + DVFTY+ ++ + + Q K+ ++M+ G
Sbjct: 149 KLGNMDEAVVLFNQM----LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN IT+++L+++ +G A +L + ML+ C+P+ N+++ + Q D A+ L
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F+ T D+ + P
Sbjct: 265 FQLMT-------------------------DRGCL----------------------PDI 277
Query: 516 TTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYNI++ C + L+ M G P+ +++ ++ + V+ A ++ ++
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+R G DVV +T I +S+RL A L EM+ P++V Y L+ +
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG---FCK 394
Query: 634 LHEVQQCLAVYQDMWKAG 651
++ + LA + +M G
Sbjct: 395 ADQLDKSLAFFSEMLDKG 412
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 134/348 (38%), Gaps = 58/348 (16%)
Query: 343 AQEIYGEVK-HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN---- 397
AQE Y K HL G+ D TYST++ F A+ +Q A ++ ++M G+ P+
Sbjct: 14 AQEAYDLFKNHL--CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVY 71
Query: 398 ------------------------------TITWSSLINACANAGLVEQAMHLFEEMLQA 427
IT++ L++A + + A + E+M++A
Sbjct: 72 NTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEA 131
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN N L+ + D A LF + + Y+ D E
Sbjct: 132 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT-YNILIDGYCKQER--- 187
Query: 488 QSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
P + ++ +P TYN LM + + A L M
Sbjct: 188 ----------PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+H ++ ++ID G ++ A ++ ++M + G PD+ Y I R+ R+ A
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L E M P++VTY +++ + + E + VY+ + G
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE---VYEVLRNGG 342
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+ ++ F K Q A + ++ L +P++IT+S+LIN A +QA L +EM +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ N +++ + + D A
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSAL--------------------------------- 88
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
HY + + P+ TY IL+ A C A ++ +M G
Sbjct: 89 -------------VHYRDMQRHCA--PSVITYTILVDALCKSARISDASLILEDMIEAGC 133
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LI+ GN++ A+ + M E+ SPDV Y I + +R +
Sbjct: 134 APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 193
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYG 632
L +EM Y +PN +TY TL+ + + G
Sbjct: 194 LLQEMVKYGCEPNFITYNTLMDSLVKSG 221
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ + +ID+ G + +++ + + +IY +N +++ A+ + ++
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + G D+ +YN ++ C A A E+Y +++ G LDV T ST++
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN----GGYFLDVVTCSTLID 355
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A K+ +M G P+ + ++ LI+ A +++++ F EML GC P
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + E + ++ +NS+++ A + EVY+ ++ G D+ + + L+
Sbjct: 296 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C + A+++ ++ +E G DV Y+ ++ F A +L +ML
Sbjct: 356 GLCKSRRLDDAEKL---LREMERNGSAP-DVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
G P IT+S +I+ + V L + ML+ G
Sbjct: 412 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 178/404 (44%), Gaps = 50/404 (12%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E K DL+ LR + S PN+ I T+ID C G+ K++ ++ ++ +
Sbjct: 178 EIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231
Query: 290 NIYVFNSLMNVNAHDL------KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + L+ H L K E+Y+ MQ+ GV ++ +YN ++ C G T A
Sbjct: 232 NEWTYTVLI----HGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDA 287
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+++ E++ +GV ++ TY+T++ A KV + M S G+ PN IT+++
Sbjct: 288 FKLFDEMRE---RGV-SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI+ G + +A+ L ++ G P+ NIL+ + A ++ +
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ +++ Y D + M++ +K +P + P TY++
Sbjct: 404 IKPSKIT----YTILIDTFARMDNMEKAIQLRSPM-----------EELGLTPDVHTYSV 448
Query: 521 LMKACCTDYYRVKALMNE-------MRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
L+ C +K MNE M L PN + + ++ G+ AL++ +
Sbjct: 449 LIHGFC-----IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
M E + P+V +Y I+V + ++ K+A L E+M I P+
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 168/369 (45%), Gaps = 31/369 (8%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F ++ A +++ + ++ +++ G ++ Y L+ CC G A+
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ K L + +TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEM----GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVE--ACQFDRAFRLFRSWTL 461
+N G + A LF+EM + G N N L+ C E A + ++ +S +
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYNIL
Sbjct: 335 NPNLITYNTLIDGFCGV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNIL 379
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ I++TILID N+E A+Q+ M E G+
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+PDV Y+ I C++ ++ +A LF+ M +++PN V Y T++ + GS +
Sbjct: 440 TPDVHTYSVLIHGFCIKG-QMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSY--- 495
Query: 639 QCLAVYQDM 647
+ L ++++M
Sbjct: 496 RALRLFREM 504
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E+K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A LF EM + G N +L+ + + F ++ L Y
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNL---YT 270
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
N + N KD ++ + FD + TYN L+ C +
Sbjct: 271 YNC--VMNQHCKDGRT---------KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A +M++M++ G++PN I++ LID G G + AL + + ++ G+SP +V Y
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + A + +EM+ I+P+ +TY L+ +R ++ + Q
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQ 429
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 25/248 (10%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +INA + ++ ++ F EM+ G P S C N LL V + F++ +R F
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
SK +V D D + I + I SFD + F F P
Sbjct: 155 -SKIKV----DLDVYSFGIVIKGCCEAGEIE-----------KSFDLLVELREFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM GL N ++T+LI +G + ++ +
Sbjct: 199 VIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+EDG+ P++ Y + + R K AF LF+EM+ + N+VTY TL+ R
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 634 LHEVQQCL 641
+E + +
Sbjct: 319 ANEANKVM 326
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKL 318
I V G C GD + + +++ + + + + L++ A +++ +++ M++L
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFTYSTIVKVFADA 376
G+ D+ +Y++L+ C+ G A ++ + K LE V+ Y+T+V +
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVI------YNTMVLGYCKE 491
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
AL++ +M + PN ++ +I ++A L E+M+ G +P+
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551
Query: 437 NILLQA 442
N++ +A
Sbjct: 552 NLISRA 557
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 53/318 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M K G ++ +YN L+ + A A ++ +++ + + D TY T+
Sbjct: 404 KLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEP----DRVTYCTL 459
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A + +A+ + E M G++P+T T+S +IN +G + A LF EM+ GC
Sbjct: 460 IDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 519
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN NIL+ +A + A L+R D Q+
Sbjct: 520 VPNIVTYNILIALQAKARNYQTALELYR----------------------------DMQN 551
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPN 547
FKP TY+I+M+ C +A+ EMR P+
Sbjct: 552 A-------------------GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPD 592
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ +L+D G +GNVE A + M G+ P+V + + +R RL A++L +
Sbjct: 593 EPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQ 652
Query: 608 EMKHYQIQPNLVTYITLL 625
M + P+L TY LL
Sbjct: 653 NMVTLGLNPSLQTYTLLL 670
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 41/300 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY+T+V + A+ + K+ E M+ G PN +T++ LI++ A + +A+++F
Sbjct: 382 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGED 471
+M + GCEP+ L+ +A D A ++ ++T S LG+
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 472 YDGNTDRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCT 527
GN + E D+ + PN V TYNIL ++A
Sbjct: 502 --GNLSAAHRLFCEMVDQGCV---PNIV-------------------TYNILIALQAKAR 537
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+Y L +M+ G P+ ++++I+++ G G +E A + MR++ PD Y
Sbjct: 538 NYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYG 597
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + ++ +++A+ + M + PN+ T +LL A R +H + + Q+M
Sbjct: 598 LLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLR---VHRLPDAYNLLQNM 654
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L AL ++ ++ P+ T+ID+ G + ++YE
Sbjct: 419 VTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYER 478
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ + + ++ ++N + +L ++ M G + ++ +YNIL+ A N
Sbjct: 479 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 538
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+Y ++++ K D TYS +++V + + A V +M P+
Sbjct: 539 YQTALELYRDMQN----AGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEP 594
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A + ML+AG PN CN LL A F R RL ++
Sbjct: 595 VYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSA------FLRVHRLPDAY 648
Query: 460 TLSKTQVALG 469
L + V LG
Sbjct: 649 NLLQNMVTLG 658
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y+ ++ SP+ + +I+ G G+ + ++ +
Sbjct: 454 VTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCE 513
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q NI +N L + A + + LE+Y++MQ G D +Y+I+++ G
Sbjct: 514 MVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGY 573
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E++ + D Y +V ++ A + A + ML AG+ PN
Sbjct: 574 LEEAEAVFFEMR----QNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVP 629
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++A + A +L + M+ G P+ Q +LL C EA +D F
Sbjct: 630 TCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGF 684
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P TYN L+ + Y +AL N+M+ +G P+ +++ LID +G ++ A+
Sbjct: 415 QPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMS 474
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+E G+SPD Y+ I +S L A LF EM PN+VTY L L+A
Sbjct: 475 MYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQA 534
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 535 KAR-----NYQTALELYRDMQNAG 553
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ M+ VGLSP+ +++++I+ G SGN+ A ++ M + G P++V Y I +
Sbjct: 474 SMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 533
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC-LAVYQDMW 648
+++ + A L+ +M++ +P+ VTY ++ G L E + + Q+ W
Sbjct: 534 AKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHW 589
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L+ M +DG P+VV Y I R+ L
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A ++F +M+ +P+ VTY TL+ ++ G L +++Y+ M + G
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFL---DVAMSMYERMQEVG 483
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 44/415 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE--QAMHLFEEMLQAG 428
+A + + +L+V + M G P T++ LIN GLVE QA+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-----GLVEKRQAVEILDEMTLAG 651
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SN 481
N ++Q +AF F V + Y+ + R+ S
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSA 710
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + S N P R SF YNIL+ D + L+ +M
Sbjct: 711 LAVTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQM 752
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 867
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 189/459 (41%), Gaps = 64/459 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYD------GNTDRISNMEHKDKQSITNTPN---FVP--NSHYS 503
K V L + GN DR K+ Q + + P F+P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
S D R S + PT T+N L+ V+ +++EM G+S N ++T
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVE-ILDEMTLAGVSANEHTYT 660
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 661 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 720
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I N Y L+ +R G + E + Q M K G
Sbjct: 721 NIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 756
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 195/473 (41%), Gaps = 69/473 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K +A +D +K+ + N I II C C + ++ A+
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
I ++++I+A G +++A+ +EM + P ++ ++ ++ R+ +F
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 457 -RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T +G ++ +E D+ ++ N H
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVS---ANEH-------------- 657
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK- 572
TY +M+ A D + ++ GL + ++ L+ AC SG ++ AL + K
Sbjct: 658 -TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 716
Query: 573 ----------------------------------IMREDGMSPDVVAYTTAIKVCVRSKR 598
M+++G+ PD+ YT+ I C ++
Sbjct: 717 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 776
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 777 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMG 826
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M++ GV AD +YN L+ C +G A + ++ + + ++ +V T++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL---MRDMVMRDIVP-NVITFTA 249
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF + A+K+ E+M V P+ T++SLIN G V++A + + M+ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ ++ + D +LFR Q L D I +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLVGDTITYNTIIQGYFQAGR- 364
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
P++ F R +P TY+IL+ C ++ KAL+ M+ +
Sbjct: 365 ---------PDAAQEIF-SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+I GNVE A + + + G+ PDVV+YTT I R ++ ++ L+
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 607 EEMKHYQIQP 616
+M+ + P
Sbjct: 475 RKMQEDGLLP 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 155/380 (40%), Gaps = 72/380 (18%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ + + ++ +M+ G+ D+ SYNI++ C V+A + G++ +
Sbjct: 82 SKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEP---- 137
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV T S+++ F A+ + M G P+ + ++++I+ GLV A+ LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M + G ++ N L+ + ++ A RL R + D + N
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR--------------DIVPN 243
Query: 482 MEHKDKQSITNTPN---FVPNSHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRV 532
+ IT T FV +S K R P TYN L+ C + RV
Sbjct: 244 V-------ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRV 295
Query: 533 ---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
K +++ M T G P+ +++ LI+ S V+ ++ + M + G+ D + Y T
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 590 IK---------------------------------VCVRSKRLKQAFSLFEEMKHYQIQP 616
I+ +C+ + R+++A LFE M+ +I+
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM-NWRVEKALVLFENMQKSEIEL 414
Query: 617 NLVTYITLLRARSRYGSLHE 636
++ TY ++ + G++ +
Sbjct: 415 DITTYNIVIHGMCKIGNVED 434
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+E G+ D+++Y+ ++ + +AL V M+ G P+ +T SSLIN
Sbjct: 94 HMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 152
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSK 463
V A+ L +M + G P+ N ++ + + A LF R+ ++
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ G G R S+ + + + VPN +F T ++ +K
Sbjct: 213 NSLVAGLCCSG---RWSDAARLMRDMVMR--DIVPNV--------ITF---TAVIDVFVK 256
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L EM + P+ ++ LI+ G V+ A Q+L +M G PDV
Sbjct: 257 E--GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T I +SKR+ + LF EM + + +TY T+++ + G Q+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN+ +IDV G + ++ +YE++ + V +++ +NSL +N + ++ K
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL--INGLCMHGRVDEAK 299
Query: 314 NMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M L G + D+ +YN L+ C + +++ E+ G D TY+TI
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTI 355
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A A ++ M S PN T+S L+ VE+A+ LFE M ++
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRS 458
E + NI++ + + A+ LFRS
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+F ++P T + L+ C A L+++M +G P+ + + +ID G V
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M DG+ D V Y + + S R A L +M I PN++T+ ++
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 626 RARSRYGSLHEVQQCLAVYQDM 647
+ G E + +Y++M
Sbjct: 252 DVFVKEGKFSEA---MKLYEEM 270
>gi|449457967|ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 194/427 (45%), Gaps = 56/427 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G L +A++ Y K + PN++I T+ID+ I G + +Y
Sbjct: 518 LLICS-CKELGH---LENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLS 573
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
LRS + L++ +N ++ + K G + D AC +
Sbjct: 574 LRSSGIPLDLIAYNVVVRMYV--------------KAGSLED---------ACSVLDLMA 610
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
Q+I ++ L L ++ +V AD + +L +GV+ + +
Sbjct: 611 EQQDIVPDIYLLRDM----LRIYQRCGMVHKLADLYY---------RILKSGVSWDQEMY 657
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN C+ A V++ LF+EMLQ G PN+ N++L ++ F +A LF L
Sbjct: 658 NCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF---GL 714
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
++ + L + NT ++KD +++++T V ++ F S + +
Sbjct: 715 AQKR-GLVDAISYNTMISVYGKNKDFKNMSST---VQKMKFNGFS--VSLEAYNCMLDAY 768
Query: 522 MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
K C + +R +++ M+ +H ++ I+I+ G G ++ ++L ++ G+ P
Sbjct: 769 GKECQMENFR--SVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEP 826
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D+ +Y T IK + +++A L +EM+ +I+P+ +TYI ++RA R E
Sbjct: 827 DLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLE----- 881
Query: 642 AVYQDMW 648
AV +W
Sbjct: 882 AVKWSLW 888
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 41/318 (12%)
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLIN 406
G + + + G LK +V Y+ +++V + W A K+ E++ + G + +++LI
Sbjct: 149 GFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIY 208
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR---AFRLFRSWTL-- 461
AC + VEQ F ML+ +PN +L+ + C AF R++ +
Sbjct: 209 ACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVC 268
Query: 462 -----SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S + + + + + + +DK I N N+V
Sbjct: 269 ETAYASMITIYIRMNLYDKAEEVIQLMQEDK-VIPNLENWV------------------- 308
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+++ A C +A + M G S N I++ LI G + N++ A ++ +
Sbjct: 309 ---VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGI 365
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ G+ PD Y + I+ R+ K A ++E+K PN TL+ +++
Sbjct: 366 KNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAK---- 421
Query: 635 HEVQQ-CLAVYQDMWKAG 651
HE + L DM K G
Sbjct: 422 HEDEAGTLKTLNDMLKIG 439
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 146/394 (37%), Gaps = 102/394 (25%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ +M++ G +++ +YN L+ A N AQ ++ +K+ GV + D TY +++
Sbjct: 326 VFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKN---SGV-EPDETTYRSMI 381
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A ++MA +++ G PN+ +LIN A + +ML+ GC
Sbjct: 382 EGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCR 441
Query: 431 PNS----------------------------------QCCNILLQACVEACQFDRAFRLF 456
P+S C+IL+ A V+ C D A ++
Sbjct: 442 PSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVL 501
Query: 457 R--SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R W + L + + ++E+ K Y+ KR + KP
Sbjct: 502 REKEWKDHHFEENLYHLLICSCKELGHLENAIKI-------------YTQLPKREN-KP- 546
Query: 515 TTTYNILMKACCTDYYRV-------KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
N+ + D Y + + L +R+ G+ + I++ +++ +G++E A
Sbjct: 547 ----NLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDA 602
Query: 568 LQILKIMRED------------------------------------GMSPDVVAYTTAIK 591
+L +M E G+S D Y I
Sbjct: 603 CSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVIN 662
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
C R+ + + LF+EM PN VT +L
Sbjct: 663 CCSRALPVDELSRLFDEMLQCGFAPNTVTLNVML 696
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV + MQ+ V+ ++ ++ ++L A C G A+ ++ +E G ++ Y+T+
Sbjct: 290 EVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFAS---MEEAG-FSSNIIAYNTL 345
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A ++ + ++GV P+ T+ S+I AG + A ++E+ + G
Sbjct: 346 ITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGY 405
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM--EHKDK 487
PNS N+ ++A D A L KT + + + + N+ ++
Sbjct: 406 MPNSS--NLFTLINLQAKHEDEAGTL-------KTLNDMLKIGCRPSSIVGNVLQAYEKA 456
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM---KACCTDYYRVKALMNEMRTVGL 544
+ + + P + S Y R T+ ++M K C D + +R
Sbjct: 457 RRMKSVPVLLTGSFY-----RKVLSSQTSCSILVMAYVKHCLVD-----DALKVLREKEW 506
Query: 545 SPNHIS---WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+H + +LI +C G++E A++I + + P++ T I + R
Sbjct: 507 KDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSD 566
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE---VQQCLAVYQDM 647
L+ ++ I +L+ Y ++R + GSL + V +A QD+
Sbjct: 567 GEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDI 615
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 56/345 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+ +K + + G+ ++ +Y L+ C +G A + ++ K + +V TYS
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM----IKRKITPNVITYSA 265
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F A ++ E+M+ + P+ +T+SSLIN +++A +F+ M+ G
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ +A + + +LFR + ++
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS--------------------------QR 359
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSP 546
+ N T TYN L++ D + + ++M + G+SP
Sbjct: 360 GLVN---------------------NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ IL+ +G +E AL I + M++ M D+V YTT I+ ++ +++ A+ LF
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++P++VTY T++ G HEV+ A+Y M + G
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE---ALYTKMKQEG 500
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 160/375 (42%), Gaps = 33/375 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I FN L++ V + + K M+ LG+ D+ ++NI++ C LA +
Sbjct: 84 SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVL 143
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + D T ++V F A+ + + M+ G P+ + ++++I++
Sbjct: 144 GKMLKLGYEP----DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDS 199
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
V A+ F+E+ + G PN L+ + +++ A RL R K
Sbjct: 200 LCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPN 259
Query: 464 --TQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSS--------------FD 506
T AL + + N + E ++ ++ P+ V S + FD
Sbjct: 260 VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 507 KRFSFK--PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGS 561
S P +YN L+ C RV+ L +M GL N +++ LI
Sbjct: 320 LMVSKGCFPDVVSYNTLINGFCK-AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G+V+ A + M G+SPD+ Y + + L++A +FE+M+ ++ ++VTY
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438
Query: 622 ITLLRARSRYGSLHE 636
T+++ + G + +
Sbjct: 439 TTVIQGMCKTGKVED 453
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 170/408 (41%), Gaps = 84/408 (20%)
Query: 204 KPDV---NLAIRYACIVPRADILFCNFVREFGKK-------------RDLVSALRAYDAS 247
+PD+ N I C R + +F +E G+K L ++ R DA+
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDAL-DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 248 K------KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-V 300
+ K +PN+ ++D G ++++ I+E++ ++ +I ++SL+N +
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 301 NAHD-LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
HD + +++ M G D+ SYN L+ C A +++ + + +G++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF---RKMSQRGLV 362
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ TY+T+++ F A + M S GV+P+ T++ L+ + GL+E+A+
Sbjct: 363 N-NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE+M ++ + + ++Q + + + A+ LF S +L
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK----------------- 464
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMN 537
KP TY +M CT + V+AL
Sbjct: 465 ------------------------------GLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+M+ GL N ++L C G G++ + +++K M G +P ++
Sbjct: 495 KMKQEGLMKND---SML---CLGDGDITISAELIKKMLSCGYAPSLLG 536
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
++P YN ++ + C AL E+ G+ PN +++T L++ SG
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + ++P+V+ Y+ + V++ ++ +A +FEEM I P++VTY +L+
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303
Query: 627 ARSRYGSLHEVQQ 639
+ + E Q
Sbjct: 304 GLCLHDRIDEANQ 316
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 517 TYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
T+NI++ CC +++ +M +G P+ ++ L++ V A+ ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD+VAY I +++R+ A F+E+ I+PN+VTY L+ G
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 635 HEVQQCLAVYQDMWK 649
++ + L +DM K
Sbjct: 242 NDAARLL---RDMIK 253
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ ++P T L+ C RV +L+++M +G P+ +++ +ID+ + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRV 206
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
AL K + G+ P+VV YT + S R A L +M +I PN++TY L
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWK 649
L A + G + E ++ ++++M +
Sbjct: 267 LDAFVKNGKVLEAKE---IFEEMVR 288
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 181/440 (41%), Gaps = 79/440 (17%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E G ++ + KGV+ + TY+T++ +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAG---FSKEAAGVIEMMTKKGVMP-NAITYTTVIDAYG 397
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G +PN
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
TW++++ C N G+ + +F EM G EP+ N L+ A A +++
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
T + +A D+ + IS+M+ K
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK---------------------- 555
Query: 508 RFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
FKPT T+Y+++++ A +Y ++ + N ++ + P+ + L+ A +
Sbjct: 556 --GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G+ + + ++ G PD+V + + + + R+ QA + E ++ + P+LVTY +L+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 626 RARSRYGSLHEVQQCLAVYQ 645
R G + ++ L +
Sbjct: 674 DMYVRRGECWKAEEILKTLE 693
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 172/405 (42%), Gaps = 41/405 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN T+ID G G ++ ++ ++ N +N+++++ + +++
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + A++N +L C G ++ E+K + D T++T++
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG----FEPDRDTFNTLIS 499
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M AG T+++L+NA A G ++ +M G +P
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 432 NSQCCNILLQACVEACQF---------DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+++LQ + + + ++F SW L +T + ++N
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL------------LANF 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + + + K+ +KP +N ++ + Y + + ++ +R
Sbjct: 608 KCR---------ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ +++ L+D G A +ILK + + + PD+V+Y T IK R ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ---QCLA 642
+A + EM I+P + TY T + + G E++ +C+A
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 170/404 (42%), Gaps = 34/404 (8%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM 315
+ + + G Y + + + + Q L++ + ++++ + K+ +++++ M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+++G + +YN++L G + ++I G + + +KG LK D FT ST++ A
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEMRSKG-LKFDEFTCSTVLSACAR 293
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A + ++ S G P T+T+++L+ AG+ +A+ + +EM + C +S
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 436 CNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDK 487
N L+ A V A A + T ++ T V G D + + K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
++ VPN+ +++ S + N ++K C +M++ G SPN
Sbjct: 414 EA-----GCVPNT--CTYNAVLSLLGKKSRSNEMIKMLC-----------DMKSNGCSPN 455
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+W ++ CG G + ++ + M+ G PD + T I R A ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + TY LL A +R G + V DM G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGEN---VISDMKSKG 556
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I E
Sbjct: 602 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG- 715
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 716 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 400 TWSSLINACANAGLVEQAMHL 420
T+ +++ AG +AM
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDF 793
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P+ + RT++ C S + + ++ +FNS++++ + + +
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++++ G+ D+ +YN L+ G A+EI +K LE K LK D+ +Y+T++K
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI---LKTLE-KSQLKPDLVSYNTVIK 709
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A+++ +M G+ P T+++ ++ G+ + + E M + C P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 432 NSQCCNILLQACVEACQFDRA 452
N +++ A ++ A
Sbjct: 770 NELTFKMVVDGYCRAGKYSEA 790
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 183/456 (40%), Gaps = 39/456 (8%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P F +R + + AL +D SP++ ++D Y ++ A
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R++ +I +N L+N N D+ L + N+ G D +Y +LK+ C
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Query: 336 LAGNTVLAQEIYGEVKHLEAKGV---LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
E + EV+ L A+ D T++TIV A++V + M
Sbjct: 368 -------GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G + +T+SS+++ + G V+ A+ L + GC+P++ +L+ Q++RA
Sbjct: 421 GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480
Query: 453 FRLFRSWTLSK--------TQVALGEDYDGNTDR----ISNMEHKDKQSITNTPNFVPNS 500
L S V G DR + M T N + +
Sbjct: 481 EELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDG 540
Query: 501 --HYSSFDKRFSF---------KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
+ S D KP T+N L+K C + + LM M P+
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD 600
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +I + G + A++ LKIM E+G P+ Y+ + +++ + + A L
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
M + P+L+TY T++ ++ G + E L V
Sbjct: 661 GMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRV 694
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 169/391 (43%), Gaps = 36/391 (9%)
Query: 268 ICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
+CG + + + ++ S N + FN+++ + +EV +M + G +AD
Sbjct: 366 LCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVAD 425
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y+ +L C G A E+ +K K D Y+T++K + W+ A
Sbjct: 426 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP----DTIAYTTVLKGLCSTEQWERAE 481
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA- 442
++ +ML + P+ +T+++++ + GLV++A+ + E+M + GC P+ N ++
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Query: 443 CVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
C E+C D A L +S V G DR + E Q + N
Sbjct: 542 CNESC-IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE----QLMANM---- 592
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
R + P T+N ++ + C +A+ + M G PN +++I++
Sbjct: 593 ---------MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA +G + AL++L M +PD++ Y T I ++ ++++A L M +
Sbjct: 644 DALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
P+ TY +L R + L QD
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQD 732
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 56/312 (17%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG A + +YN ++ C AG A+ + + D FT++ +++
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP-------FPPDTFTFNPLIRALCVRG 265
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL V +DML G +P+ +T+S L++A QAM L +EM GCEP+ N
Sbjct: 266 RIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+L+ A D A + ++N P
Sbjct: 326 VLINAMCNEGDVDEALNI----------------------------------LSNLP--- 348
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
SH KP TY ++K+ C + V+ L+ EM + +P+ +++ ++
Sbjct: 349 --SH--------GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G V+ A++++ M E G D+V Y++ + R+ A L +K Y +
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458
Query: 616 PNLVTYITLLRA 627
P+ + Y T+L+
Sbjct: 459 PDTIAYTTVLKG 470
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Query: 412 GLVEQAMHLFEEMLQAG---CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G +++A+ LF+ M G C P C NIL++ + A R+F + S T V
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPC-NILIKRLCSDGRVSDAERVFAALGPSATVVTY 222
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH------------------YSSFDKRF- 509
+G R +E D + + N F P++ + FD
Sbjct: 223 NTMVNGYC-RAGRIE--DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279
Query: 510 -SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ TY+IL+ A C + Y + AL++EMR G P+ +++ +LI+A G+V+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL IL + G PD V YT +K S+R K+ L EM P+ VT+ T++
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399
Query: 627 ARSRYG 632
+ + G
Sbjct: 400 SLCQQG 405
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 139/337 (41%), Gaps = 57/337 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V + M + G D+ +YN ++ C A E+ +++ K D+ T++T
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP----DIVTFNT 571
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K W+ A ++ +M+ + P+ +T++++I + GL+ QA+ + M + G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PNS +I++ A ++A + A L T
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMT---------------------------- 663
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLS 545
TP+ + TYN ++ T +++ ++ +R + GL
Sbjct: 664 --NGTPDLI-------------------TYNTVISN-LTKAGKMEEALDLLRVMVSNGLC 701
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L + A+++L+ +++ G+SPD Y + R +R A
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F M P+ TY+ LL A + G L E ++ LA
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 10/214 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P ++ F + +K L A+ ++ PN ++D G K++A
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG---KAQA 654
Query: 278 IYEDLRSQ-NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
E L N T ++ +N++++ A ++ L++ + M G+ D +Y L
Sbjct: 655 ALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGV 714
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C T A + ++ ++ G L D Y+ ++ F + +A+ M+S+G
Sbjct: 715 CREDGTDRAVRM---LRRVQDTG-LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGC 770
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
P+ T+ L+ A A GL+++A L + G
Sbjct: 771 MPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 171/403 (42%), Gaps = 40/403 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ G G K+ + + ++ N+ +N+++ + L+ +++
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N +L C G ++ E+K + + T++ ++
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG----FEPNRDTFNALIG 498
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ +K+ E+M+ AG TP T+++L+NA A G E A + +M G +P
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Query: 432 NSQCCNILLQACVEACQFDRAF----------RLFRSWTLSKTQVALGEDYDGNTDRISN 481
N +++L C R +F SW L +T V ++N
Sbjct: 559 NETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV------------LAN 605
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + + F K +KP +N ++ + Y R ++ +
Sbjct: 606 FKRRALMGMERA--------FQEFCKH-GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R GL P+ +++ L+D G +ILK +++ G PD+V+Y T IK R +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++A EM I+P +VTY T + S G EV++ ++
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 177/420 (42%), Gaps = 27/420 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
VR G++ ALR D S ++ TI+ G Y ++ ++E +R +
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +++V L + M+ G+ D + + ++ AC G A+
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + +K ++G + FTY+++++VF A + AL + ++M P+ +T++ L
Sbjct: 301 KFFARLK---SEGYVA-GTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK- 463
+ A AG E+ + M++ G PN+ ++ A +A + D+A FR S
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGC 416
Query: 464 -TQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V G + S +E D + PNS T+N +
Sbjct: 417 VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNS---------------VTWNTM 461
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + V + EM++ G PN ++ LI A G G+ +++ + M + G
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGF 521
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P V Y + R + A S+ +MK +PN +Y +L ++ G+ +++
Sbjct: 522 TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 199/469 (42%), Gaps = 67/469 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ +K SP + ++DV G G + K + +++RS + + + ++++
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVI 287
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + L + + ++ G +A +YN LL+ AG + E +K +E K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG---IYSEALSILKEME-K 343
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D+ TY+ +V + A + + + M+ G+ PN IT++++INA AG ++
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LG 469
A+ F +M ++GC PN N +L + + + + RS + V L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSFKP 513
+ + N ++ +S PN N+ ++ + + F P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ A D+ ++++ +M++ G PN S++++++ GN G +I
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIE 583
Query: 572 K------------IMR-----------------------EDGMSPDVVAYTTAIKVCVRS 596
+ ++R + G PD+V + + + + ++
Sbjct: 584 EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN 643
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
K +A + ++ +QP+LVTY +L+ +R G + ++ L Q
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 154/381 (40%), Gaps = 24/381 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GKK L + + + +PN T++ +CG G + ++ +++S N
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
FN+L+ +++Y+ M K G + +YN LL A G+ A+ +
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESV-- 547
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +++KG K + +YS ++ +A + K++E++ + + P+ I +L+ A
Sbjct: 548 -ILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLAN 605
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ F+E + G +P+ N +L + +DRA + R S Q L
Sbjct: 606 FKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDL 665
Query: 469 GEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ D + K ++ + ++ KP +YN ++K C
Sbjct: 666 -VTYNSLMDMYARGGECWKGEEILKGI-------------QKSGGKPDLVSYNTVIKGFC 711
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A+ ++EM G+ P +++ + G G +++ M + P+ +
Sbjct: 712 RQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNEL 771
Query: 585 AYTTAIKVCVRSKRLKQAFSL 605
Y + + K+ K+A
Sbjct: 772 TYKIVVDGYCKGKKYKEAMDF 792
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 507 KRFSFKPTTTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG- 562
++ PT TYN+++ + ++ L++EMR+ GL + + + +I ACG G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 563 -----------NVEG-----------------------ALQILKIMREDGMSPDVVAYTT 588
EG AL ILK M ++ PD+V Y
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ VR+ ++ + M I PN +TY T++ A YG + + L+ ++ M
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINA---YGKAGKEDKALSFFRQMK 412
Query: 649 KAG 651
++G
Sbjct: 413 ESG 415
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGALQILKIMREDGMSPDVVAYT 587
Y R + +MR GLSP +++ +++D G G + L +L MR +G+ D +
Sbjct: 225 YERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCS 284
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I C R L +A F +K TY +LL+ + G E L++ ++M
Sbjct: 285 TVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEA---LSILKEM 341
Query: 648 WK 649
K
Sbjct: 342 EK 343
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++E+ S + +WT ++ A G E A+ + + MR+ G+SP +V Y + V
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 595 RSKR-LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ R + L +EM+ ++ + T T++ A R G L E ++ A
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFA 304
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 176/403 (43%), Gaps = 35/403 (8%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGV 320
I + G+C GD + +Y D+ + L++ V+NSL+ ++ T E +K G
Sbjct: 304 ILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK-GFCEVGRTGEAWKFWDSTGF 362
Query: 321 --MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + +YNI+ K +G A E+ +K LE D T+ T++ + +
Sbjct: 363 SGIRQITTYNIMTKGLLDSGMVSEATEL---LKQLENDASCSPDKVTFGTLIHGLCENGY 419
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++ ED ++G + ++SS+IN G A +++ M++ GC+PNS N
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSITN---TP 494
L+ + + A +++ T S Y+ D + E +++ S+T
Sbjct: 480 LINGFCRVSKINDAIKIYIEMT-SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLER 538
Query: 495 NFVPN-SHYSSF------DKRF-------------SFKPTTTTYNILMKACCTDYYRVKA 534
F P+ Y+S DK+ + +NIL+ C+ +A
Sbjct: 539 GFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEA 598
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ EM+ SPN +++ L+D G+++ A + + ++G+ PD+V Y T IK
Sbjct: 599 FCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKG 658
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
R + L E+ I P ++T+ L+RA +YG +
Sbjct: 659 LCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 56/335 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV-----NAHDL 305
SP+ T+I G+C + +RA I ED R+ L+++ ++S++N HD
Sbjct: 401 SPDKVTFGTLIH--GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
EVYKNM K G + YN L+ C A +IY E + + G + T
Sbjct: 459 N---EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE---MTSNGCCPT-IIT 511
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A+ +Q A + ++ML G P+ T++SLI V+ A+ +++E+L
Sbjct: 512 YNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL 571
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG + + NIL+ A + D AF ++ +E K
Sbjct: 572 DAGLQVDVMVHNILIHGLCSAGKVDEAFCIY-------------------------LEMK 606
Query: 486 DKQSITN--TPNFVPNSHY--SSFDKRFS---------FKPTTTTYNILMKACCTDYYRV 532
+K N T N + + Y S DK S KP TYN +K C+
Sbjct: 607 EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTP 666
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ L+NE+ G+ P I+W+IL+ A G ++
Sbjct: 667 EGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 175/458 (38%), Gaps = 66/458 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + K L +AL D + + ++ C G + K+ ++E
Sbjct: 194 VTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQ 253
Query: 282 L-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L R + N+ + +++ K EV+ M AD +Y IL+ C +G
Sbjct: 254 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ A +Y ++ K L LDV Y++++K F + A K + +G+ T
Sbjct: 314 DVDSAARVYSDM----VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT 369
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++ + ++G+V +A L +++ A C P+ L+ E +RAF +
Sbjct: 370 -TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S ++ + Y +R K T+ N V Y + K KP +
Sbjct: 429 DARNSGEELDVFS-YSSMINRFC------KDGRTHDANEV----YKNMVKD-GCKPNSHV 476
Query: 518 YNILMKACCTDYYRVKALMN------EMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
YN L+ C RV + + EM + G P I++ LID + + A +
Sbjct: 477 YNALINGFC----RVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLT 532
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSK---------------------------------- 597
K M E G PD+ Y + I+ R K
Sbjct: 533 KEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSA 592
Query: 598 -RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++ +AF ++ EMK PNLVTY TL+ GS+
Sbjct: 593 GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 156/377 (41%), Gaps = 19/377 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ I+ GD ++ +++ LR + V + +++LM+ + HD L L+
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M GV AD YN LL C G A +++ + L ++ TY ++
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVW---EQLVRDPGASPNLATYKVML 271
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
++ A +V M++ +T+T+ LI+ +G V+ A ++ +M++AG
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N L++ E + A++ + S S + T I D +
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI-------TTYNIMTKGLLDSGMV 384
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
+ + + S P T+ L+ C + Y +A ++ + R G +
Sbjct: 385 SEATELL-----KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
S++ +I+ G A ++ K M +DG P+ Y I R ++ A ++ E
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499
Query: 609 MKHYQIQPNLVTYITLL 625
M P ++TY TL+
Sbjct: 500 MTSNGCCPTIITYNTLI 516
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 146/361 (40%), Gaps = 31/361 (8%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG + S+N LL A A A + + H + ++ TY+ I++
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A+ + + GV P+ +T+S+L++ A ++ A+ L +EM G + ++ C N
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 438 ILLQACVEACQFDRAFRLFR--------SWTLSKTQVALG-----EDYDGNTDRISNMEH 484
LL C F++A +++ S L+ +V L + + S M
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292
Query: 485 KDKQSITNTPNFVPNSHYSSFD-----------KRFSFKPTTTTYNILMKACCTDYYRVK 533
+ Q+ T T + + S D + + YN L+K C + R
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC-EVGRTG 351
Query: 534 ALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAI 590
+ G S ++ I+ SG V A ++LK + D SPD V + T I
Sbjct: 352 EAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ +AF + E+ ++ + ++ +Y +++ + G H+ + VY++M K
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE---VYKNMVKD 468
Query: 651 G 651
G
Sbjct: 469 G 469
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 186/402 (46%), Gaps = 31/402 (7%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKN 314
Y C +I+ G +++ A+Y+++ + + ++N ++ + L+ V +
Sbjct: 59 YTC--LIETLLSVGRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRI 116
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+ LG+ + +Y ILL AG ++ + + ++ KG +L+ F YS ++ ++
Sbjct: 117 LDDLGLHRNQETYEILLDYNVNAGRL---EDTWSVINEMKQKG-FQLNSFVYSKVIGLYR 172
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D W+ A+ + E++ G+ + ++S+I+ G +++A+ + M Q G P+
Sbjct: 173 DNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIV 232
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQV-ALGEDYDGNTDRISNMEHKDKQSITNT 493
N L++ +A +A LF SK Q L D IS + + K +I
Sbjct: 233 TWNSLIRWHCKAGNLSKALELF-----SKMQAQGLYPDPKILVTIISRLAEQGKWNIIR- 286
Query: 494 PNFVPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHI 549
+FD K + +K + Y IL+ + + ++ +++ G+ P+
Sbjct: 287 ---------ENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSAS 337
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ +L +A G E +++L++M +G+ P+++ I + R ++A S++ M
Sbjct: 338 MFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHM 397
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K I P++VTY TL++A R EV + +Y +M +G
Sbjct: 398 KESGISPDVVTYSTLMKAYIRARKFDEVPE---IYSEMESSG 436
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 24/324 (7%)
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
NVNA L+ T V M++ G + Y+ K L + + ++ G ++ + G
Sbjct: 136 NVNAGRLEDTWSVINEMKQKGFQLNSFVYS---KVIGLYRDNGMWKKAIGIIEEIREMG- 191
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD Y++I+ F AL+V +M G+TP+ +TW+SLI AG + +A+
Sbjct: 192 MPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKAL 251
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFD---RAFRLFRSWTLSKTQV--ALGEDYD 473
LF +M G P+ + ++ E +++ F + +SW K+ A+ D
Sbjct: 252 ELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIY 311
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
G R + E + S + +P++ F Y + C +V
Sbjct: 312 GQYGRFQDAE--ECISALKSEGILPSASM--------FCVLANAYA--QQGLCEQTVKVL 359
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LM G+ PN I +LI+A G +G AL I M+E G+SPDVV Y+T +K
Sbjct: 360 QLM---EAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAY 416
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPN 617
+R+++ + ++ EM+ P+
Sbjct: 417 IRARKFDEVPEIYSEMESSGCTPD 440
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
Query: 167 DSGEVEMFVGLMEVLEEFRLPVK---------------ELDEEFRIVQLCVNKPDVNLAI 211
D+G + +G++E + E +P+ ELDE ++ +
Sbjct: 173 DNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLS----------NM 222
Query: 212 RYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+ I P DI+ N +R K +L AL + + P+ I TII G
Sbjct: 223 QQQGITP--DIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQG 280
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYN 328
+ R ++ ++S + ++ L+++ +F E ++ G++ + +
Sbjct: 281 KWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFC 340
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+L A G L ++ ++ +EA+G+ + ++ + ++ F A + AL +
Sbjct: 341 VLANAYAQQG---LCEQTVKVLQLMEAEGI-EPNLIMLNVLINAFGIAGRHREALSIYHH 396
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M +G++P+ +T+S+L+ A A ++ ++ EM +GC P+ + IL A + +
Sbjct: 397 MKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDKKAREILQAALMVLGR 456
Query: 449 FDRAFRLF 456
+ F++F
Sbjct: 457 RNCKFQIF 464
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C G+V+ A+ +L M+ G P ++YT I+ + R +A +L++EM + ++P
Sbjct: 31 CCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEMMCFGLKPR 90
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L Y +LR + G L ++ L + D+
Sbjct: 91 LKLYNIMLRGFLKKGLLRVAERVLRILDDL 120
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 173/392 (44%), Gaps = 42/392 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ K++ ++ ++ + N + L+N K E
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ MQ+ GV ++ +YN ++ C G T A +++ E++ +GV ++ TY+T++
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE---RGV-SCNIVTYNTLI 310
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A KV + M S G+ PN IT+++LI+ G + +A+ L ++ G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ NIL+ A ++ R SK + D +D NME
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD---NMEKA 427
Query: 486 DKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE------ 538
+ ++ VP+ H TY++L+ C +K MNE
Sbjct: 428 IQLRLSMEELGLVPDVH---------------TYSVLIHGFC-----IKGQMNEASRLFK 467
Query: 539 -MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M PN + + +I G+ AL++LK M E ++P+V +Y I+V + +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K+A L E+M I P+ + RA++
Sbjct: 528 KSKEAERLVEKMIDSGIDPSTSILSLISRAKN 559
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 28/363 (7%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F L+ A +++ + ++ + + G ++ Y L+ CC G A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ L L + TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEMGKLG----LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTL 461
+N G + A +F+EM + G N N L+ + + A ++ +S +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYNIL
Sbjct: 335 NPNLITYNTLIDGFCGV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNIL 379
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ +++TILID S N+E A+Q+ M E G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV Y+ I C++ ++ +A LF+ M +PN V Y T++ + GS +
Sbjct: 440 VPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 639 QCL 641
+ L
Sbjct: 499 KLL 501
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A LF EM + G N + +L+ + + F ++ L Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL---YT 270
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
N + N KD ++ + FD + TYN L+ C +
Sbjct: 271 YNC--VMNQLCKDGRT---------KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A ++++M++ G++PN I++ LID G G + AL + + ++ G+SP +V Y
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ R A + +EM+ I+P+ VTY L+ +R ++ + Q
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 25/246 (10%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +IN+ + + ++ F EM+ G P S C N LL V + F++ + F
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
+K++V L + Y E + + SFD F F P
Sbjct: 155 -NKSKVVL-DVYSFGILIKGCCEAGEIEK--------------SFDLLIELTEFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM +GL N ++T+LI+ +G + ++ +
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+EDG+ P++ Y + + R K AF +F+EM+ + N+VTY TL+ R
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 634 LHEVQQ 639
L+E +
Sbjct: 319 LNEANK 324
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ +D A + +D ++ S N+ T+I G+C + + A + + ++S +
Sbjct: 282 GRTKD---AFQVFDEMRERGVSCNIVTYNTLIG--GLCREMKLNEANKVVDQMKSDGINP 336
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N+L++ L L + ++++ G+ + +YNIL+ C G+T A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM- 395
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
VK +E +G+ K TY+ ++ FA + + A++++ M G+ P+ T+S LI+
Sbjct: 396 --VKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCN-ILLQACVEACQFDRAFRLFR 457
G + +A LF+ M++ CEPN N ++L C E + RA +L +
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY-RALKLLK 502
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 170/406 (41%), Gaps = 64/406 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY---EDLRS-QNV 287
G+ D +S L + + P++ + I+D G+C +A+ E +RS
Sbjct: 186 GRVGDALSVLDGMSGPESDVC-PDVVMLNNIVD--GLCKTGRLQQAVKFVEERMRSVHGC 242
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
N +N L + A ++ E+ M+K V + + N ++ C G A E
Sbjct: 243 APNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALE 302
Query: 346 IYGEVKHL--EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E + + EA+G + TYST+V F +A+++ +M+ G +P+ I + +
Sbjct: 303 FFREKRTVWPEARG----NAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+I+ AG ++ A + M +AG + +++ NIL+ F R RL ++ L
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGG------FCRRKRLNEAYEL-- 410
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
LGE K +P TYN L+
Sbjct: 411 ----LGEM-----------------------------------KEAGLQPDVYTYNTLLS 431
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C D+ V L+ +M G P+ +++ LI G ++ AL+I + M E G+ P
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQP 491
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ V Y T I +S+ A LF+EM+ + N+ T+ LL+
Sbjct: 492 NTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKG 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 152/376 (40%), Gaps = 49/376 (13%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R + + L + + FN+L++ A DL +++ +M+ V ++ +Y IL+K
Sbjct: 121 ARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVK 180
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLS 391
C AG A + + E+ + DV + IV Q A+K V+E M S
Sbjct: 181 GLCKAGRVGDALSVLDGMSGPESD--VCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238
Query: 392 A-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G PNT+T++ L +A AG V A L +M + PN+ N ++ +
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A FR + + + GN ++T YS+ F
Sbjct: 299 AALEFFRE------KRTVWPEARGN-------------AVT----------YSTLVGAFL 329
Query: 511 FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T + M+ L +EM G SP+ I + +I +G ++ A +
Sbjct: 330 H---TNNVGVAME-----------LFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSM 375
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M++ G D AY I R KRL +A+ L EMK +QP++ TY TLL +
Sbjct: 376 ATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCK 435
Query: 631 YGSLHEVQQCLAVYQD 646
G V + L D
Sbjct: 436 AGDFLAVDELLGKMID 451
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V F ++ A+ + +SP+ + T+I G + ++
Sbjct: 319 VTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATS 378
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ L+ +N L+ L E+ M++ G+ D+ +YN LL C AG+
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGD 438
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ E+ G++ G + V T+ T++ + AL++ M +G+ PNT+
Sbjct: 439 FLAVDELLGKM----IDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTV 494
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+++LI+ + A+ LF+EM + N N LL+ + ++AF L
Sbjct: 495 IYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y IL ++ + + L + + P+ ++ L+DA +G++ G Q+ MR+
Sbjct: 107 YKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDA 166
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNLVTYITLLRARSRYGSLH 635
+ P+VV Y +K ++ R+ A S+ + M + + P++V ++ + G L
Sbjct: 167 SVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQ 226
Query: 636 E 636
+
Sbjct: 227 Q 227
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 73/351 (20%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVY 312
++Y I +C ++ + D++ + V N++ ++LMNV LK L+V+
Sbjct: 135 DVYTYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVF------- 364
++MQ+ G++ ++ +YN L+ ++YG++ E A VL+ F
Sbjct: 195 EDMQRDGIVPNVVTYNTLI-------------DVYGKLGQWEQALQVLRRMKFQGIEPVT 241
Query: 365 -TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + WQ AL++ E+M +AG NT ++++LI+A + AG + Q + + +
Sbjct: 242 RTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQ 301
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M+Q GCE + + L+ AC ++ ++ A R F
Sbjct: 302 MVQQGCERSVITYSSLISACEKSGEWQLALRFFDECL----------------------- 338
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRT 541
KD N PN T+N L+ AC + + + L M+
Sbjct: 339 -KD--------NCRPN---------------VITFNSLITACAQGAQWEKARELFELMQQ 374
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
G +P+ +++T LI A G + ALQ + M+ G PD + Y I
Sbjct: 375 QGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDT 425
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 52/331 (15%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+AD+ +Y + C A A E+ +++ +GV + +V T+S ++ V +
Sbjct: 133 LADVYTYTAAISICVSAQQLERALELSADMQR---RGVQR-NVHTHSALMNVCIKCGQLK 188
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+AL V EDM G+ PN +T+++LI+ G EQA+ + M G EP ++ N L+
Sbjct: 189 LALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLM 248
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
AC + Q+ A +L+ E + NT ++ N+
Sbjct: 249 IACNTSGQWQTALQLYE-------------------------EMRAAGHALNTTSY--NA 281
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
S+ K TY +++ C R+V I+++ LI AC
Sbjct: 282 LISAHSKAGDLPQVLDTYRQMVQQGCE------------RSV------ITYSSLISACEK 323
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
SG + AL+ +D P+V+ + + I C + + ++A LFE M+ P++VT
Sbjct: 324 SGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVT 383
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y L+ A R G + Q L +Q M G
Sbjct: 384 YTALISAYERGG---KWQLALQAFQAMQAKG 411
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+IDV G G + ++ + ++ Q + +N+LM + + L++
Sbjct: 204 PNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQL 263
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M+ G + SYN L+ A AG+ + Y + + +G + V TYS+++
Sbjct: 264 YEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTY---RQMVQQGCER-SVITYSSLIS 319
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ WQ+AL+ ++ L PN IT++SLI ACA E+A LFE M Q GC P
Sbjct: 320 ACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTP 379
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRS 458
+ L+ A ++ A + F++
Sbjct: 380 DVVTYTALISAYERGGKWQLALQAFQA 406
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 124/305 (40%), Gaps = 57/305 (18%)
Query: 330 LLKACCLAGNTVLAQEIYGEVKHL--EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LLK G AQE + V L + DV+TY+ + + A+ + AL++
Sbjct: 101 LLKELARTGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAISICVSAQQLERALELSA 160
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DM GV N T S+L+N C G ++ A+ ++E+M + G PN N L+ +
Sbjct: 161 DMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLG 220
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q+++A ++ R
Sbjct: 221 QWEQALQVLR-------------------------------------------------- 230
Query: 508 RFSFK---PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
R F+ P T TYN LM AC T + L EMR G + N S+ LI A +G
Sbjct: 231 RMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAG 290
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++ L + M + G V+ Y++ I C +S + A F+E +PN++T+
Sbjct: 291 DLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFN 350
Query: 623 TLLRA 627
+L+ A
Sbjct: 351 SLITA 355
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
IVP + + + +GK AL+ K P T++ C G + +
Sbjct: 202 IVPNV-VTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTA 260
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+YE++R+ LN +N+L++ + A DL L+ Y+ M + G + +Y+ L+ A
Sbjct: 261 LQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISA 320
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C +G LA + E K + +V T+++++ A W+ A ++ E M G
Sbjct: 321 CEKSGEWQLALRFFDECL----KDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQG 376
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
TP+ +T+++LI+A G + A+ F+ M GC+P+S N ++
Sbjct: 377 CTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAII 423
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 67/377 (17%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGN 339
+R Q V +N+ F +M A K VY M+K GV+ ++A++N LL A C + N
Sbjct: 128 MRRQGV-VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKN 186
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQEI+ ++ G D TYS +++ + A KV DML AG P+ +
Sbjct: 187 VRKAQEIFEQMN-----GRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIV 241
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ ++++ G VE+A+ + ++M GC+P + ++L+ + + A F
Sbjct: 242 TYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATF--- 298
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
D D I P YN
Sbjct: 299 ------------LDMQKDGIV--------------------------------PDVVVYN 314
Query: 520 ILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
L+ A C + +RV M++M G++PN +W I+++ G + A ++ + M
Sbjct: 315 ALVTAFCKVKKFDNAFRV---MDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRM 371
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ PD YT IK+ + RL+ A +++ M+ Q P++ T+ L+ G
Sbjct: 372 IKR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKG-- 428
Query: 635 HEVQQCLAVYQDMWKAG 651
EV Q + +DM + G
Sbjct: 429 -EVSQACVLLEDMIEKG 444
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 126/276 (45%), Gaps = 41/276 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYED 281
F +R++ + + + A+ ++ +K+ PN+ +++ C +C + K++ I+E
Sbjct: 139 FGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLL--CALCKSKNVRKAQEIFEQ 196
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + + ++ L+ A +L +VY +M G D+ +Y I++ + C G
Sbjct: 197 MNGR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGR 255
Query: 340 T----VLAQE-----------IYGEVKH-----------------LEAKGVLKLDVFTYS 367
+ Q+ IY + H ++ G++ DV Y+
Sbjct: 256 VEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVP-DVVVYN 314
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+V F K + A +V +DM G+TPN+ TW+ ++N + G ++A +F M++
Sbjct: 315 ALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR 374
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
C+P+S ++++ E + + A ++++ L +
Sbjct: 375 -CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQ 409
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
P +I ++ G+ + A + D++ + ++ V+N+L+ KF
Sbjct: 272 QPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFR 331
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTI 369
V +M+ G+ + ++NI+L G A ++ +K + D TY+ +
Sbjct: 332 VMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQP------DSDTYTMM 385
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+K+F + +MALKV + M P+ T+S LIN + G V QA L E+M++ G
Sbjct: 386 IKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 445
Query: 430 EPNSQCCNILLQ 441
P L Q
Sbjct: 446 RPPGSTFGKLRQ 457
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 44/415 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE--QAMHLFEEMLQAG 428
+A + + +L+V + M G P T++ LIN GLVE QA+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-----GLVEKRQAVEILDEMTLAG 651
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SN 481
N ++Q +AF F V + Y+ + R+ S
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSA 710
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ + S N P R SF YNIL+ D + L+ +M
Sbjct: 711 LAVTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQM 752
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 600 KQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 867
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 189/459 (41%), Gaps = 64/459 (13%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYD------GNTDRISNMEHKDKQSITNTPN---FVP--NSHYS 503
K V L + GN DR K+ Q + + P F+P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWT 552
S D R S + PT T+N L+ V+ +++EM G+S N ++T
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVE-ILDEMTLAGVSANEHTYT 660
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 661 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 720
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I N Y L+ +R G + E + Q M K G
Sbjct: 721 NIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 756
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 195/473 (41%), Gaps = 69/473 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYE 280
+ + V F K +A +D +K+ + N I II C C + ++ A+
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ + + I +++++M+ D K L V+K +++ G + +Y L+ G
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ +K K LK TYS ++ F K W A V EDM+ G+ P+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
I ++++I+A G +++A+ +EM + P ++ ++ ++ R+ +F
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 457 -RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T +G ++ +E D+ ++ N H
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVS---ANEH-------------- 657
Query: 516 TTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK- 572
TY +M+ A D + ++ GL + ++ L+ AC SG ++ AL + K
Sbjct: 658 -TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 716
Query: 573 ----------------------------------IMREDGMSPDVVAYTTAIKVCVRSKR 598
M+++G+ PD+ YT+ I C ++
Sbjct: 717 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 776
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A EEM+ ++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 777 MNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMG 826
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 171/403 (42%), Gaps = 40/403 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN T+I+ G G K+ + + ++ N+ +N+++ + L+ +++
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N +L C G ++ E+K + + T++ ++
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCG----FEPNRDTFNALIG 498
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ +K+ E+M+ AG TP T+++L+NA A G E A + +M G +P
Sbjct: 499 AYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Query: 432 NSQCCNILLQACVEACQFDRAF----------RLFRSWTLSKTQVALGEDYDGNTDRISN 481
N +++L C R +F SW L +T V ++N
Sbjct: 559 NETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV------------LAN 605
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + + F K +KP +N ++ + Y R ++ +
Sbjct: 606 FKRRALMGMERA--------FQEFCKH-GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R GL P+ +++ L+D G +ILK +++ G PD+V+Y T IK R +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
++A EM I+P +VTY T + S G EV++ ++
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 177/420 (42%), Gaps = 27/420 (6%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
VR G++ ALR D S ++ TI+ G Y ++ ++E +R +
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +++V L + M+ G+ D + + ++ AC G A+
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+ + +K ++G + FTY+++++VF A + AL + ++M P+ +T++ L
Sbjct: 301 KFFARLK---SEGYVA-GTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK- 463
+ A AG E+ + M++ G PN+ ++ A +A + D+A FR S
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGC 416
Query: 464 -TQVALGEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
V G + S +E D + PNS T+N +
Sbjct: 417 VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNS---------------VTWNTM 461
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + V + EM++ G PN ++ LI A G G+ +++ + M + G
Sbjct: 462 LAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGF 521
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P V Y + R + A S+ +MK +PN +Y +L ++ G+ +++
Sbjct: 522 TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 199/469 (42%), Gaps = 67/469 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ +K SP + ++DV G G + K + +++RS + + + ++++
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVI 287
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + L + + ++ G +A +YN LL+ AG + E +K +E K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG---IYSEALSILKEME-K 343
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D+ TY+ +V + A + + + M+ G+ PN IT++++INA AG ++
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVA----LG 469
A+ F +M ++GC PN N +L + + + + RS + V L
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSFKP 513
+ + N ++ +S PN N+ ++ + + F P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ A D+ ++++ +M++ G PN S++++++ GN G +I
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIE 583
Query: 572 K------------IMR-----------------------EDGMSPDVVAYTTAIKVCVRS 596
+ ++R + G PD+V + + + + ++
Sbjct: 584 EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKN 643
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
K +A + ++ +QP+LVTY +L+ +R G + ++ L Q
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 154/381 (40%), Gaps = 24/381 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
GKK L + + + +PN T++ +CG G + ++ +++S N
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 291 IYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
FN+L+ +++Y+ M K G + +YN LL A G+ A+ +
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESV-- 547
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +++KG K + +YS ++ +A + K++E++ + + P+ I +L+ A
Sbjct: 548 -ILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLAN 605
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
+ F+E + G +P+ N +L + +DRA + R S Q L
Sbjct: 606 FKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDL 665
Query: 469 GEDYDGNTDRISNMEH--KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ D + K ++ + ++ KP +YN ++K C
Sbjct: 666 -VTYNSLMDMYARGGECWKGEEILKGI-------------QKSGGKPDLVSYNTVIKGFC 711
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+A+ ++EM G+ P +++ + G G +++ M + P+ +
Sbjct: 712 RQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNEL 771
Query: 585 AYTTAIKVCVRSKRLKQAFSL 605
Y + + K+ K+A
Sbjct: 772 TYKIVVDGYCKGKKYKEAMDF 792
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 507 KRFSFKPTTTTYNILMKA---CCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG- 562
++ PT TYN+++ + ++ L++EMR+ GL + + + +I ACG G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 563 -----------NVEG-----------------------ALQILKIMREDGMSPDVVAYTT 588
EG AL ILK M ++ PD+V Y
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ VR+ ++ + M I PN +TY T++ A YG + + L+ ++ M
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINA---YGKAGKEDKALSFFRQMK 412
Query: 649 KAG 651
++G
Sbjct: 413 ESG 415
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGALQILKIMREDGMSPDVVAYT 587
Y R + +MR GLSP +++ +++D G G + L +L MR +G+ D +
Sbjct: 225 YERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCS 284
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I C R L +A F +K TY +LL+ + G E L++ ++M
Sbjct: 285 TVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEA---LSILKEM 341
Query: 648 WK 649
K
Sbjct: 342 EK 343
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++E+ S + +WT ++ A G E A+ + + MR+ G+SP +V Y + V
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 595 RSKR-LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ R + L +EM+ ++ + T T++ A R G L E ++ A
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFA 304
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 136/314 (43%), Gaps = 29/314 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY ++ A W+ A+ + +DML A + P+ T+++LINAC ++G +A+
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------V 466
+ ++M G P+ NI+L A Q+ +A F +K +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-------------SFKP 513
LG+ D ++M K + + F H S KP
Sbjct: 295 KLGQSSQA-LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN LM A AL + +++ G+ P+ +S+T L+++ G S A ++
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+MR++ P+VV Y I + L +A +F +M+ I+PN+V+ TLL A SR
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 632 GSLHEVQQCLAVYQ 645
V L+ Q
Sbjct: 474 KKKVNVDTVLSAAQ 487
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 30/313 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++++ A W A + +M P+ T+ +LINA AG AM+L ++ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------LSKTQVAL-----GEDYD 473
+A P+ N L+ AC + + A + + T L + L G Y
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 474 GNTDRISNMEHKDKQSITNTPNFVP-------------NSHYSSFDKRFSFKPTTTTYNI 520
M+ + T T N + + S +KR +P T+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+M + + +A+ M GL PN +S+ L+ A G AL +L ++++G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ PDVV+YT + RS++ +A +F M+ + +PN+VTY L+ A YGS +
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA---YGSNGFLA 442
Query: 639 QCLAVYQDMWKAG 651
+ + +++ M + G
Sbjct: 443 EAVEIFRQMEQDG 455
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 173/414 (41%), Gaps = 44/414 (10%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIY 292
R AL ++ K P+ II G ++ ++ +R + ++
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 293 VFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
F S+M++ + +K +E V++ M G+ ++ SYN L+ A + G + A + G
Sbjct: 322 TFTSIMHL--YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++K G++ DV +Y+ ++ + ++ A +V M PN +T+++LI+A
Sbjct: 380 DIKQ---NGIIP-DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQ 465
+ G + +A+ +F +M Q G +PN LL AC + D +S ++
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
A Y+ N +K + Y S K+ K + T+ IL+
Sbjct: 496 AA----YNSAIGSYINAAELEKAI----------ALYQSMRKK-KVKADSVTFTILISGS 540
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + Y + + EM + + G V A I M+ G PDV
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTK------------EGQVTEAESIFNQMKMAGCEPDV 588
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+AYT+ + S++ +A LF EM+ I+P+ + L+RA ++ G V
Sbjct: 589 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 642
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 175/410 (42%), Gaps = 47/410 (11%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + + +++L+N + A ++ + + +M + + ++YN L+
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC +GN A E+ K + GV D+ T++ ++ + + + AL E M
Sbjct: 221 NACGSSGNWREALEV---CKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS---------------- 433
A V P+T T++ +I + G QA+ LF M + A C P+
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 434 QCCNILLQACV------EACQFDRAFRLFRSWTLSKTQVALGEDYDGN---TDRIS---- 480
+ C + +A V ++ + +S T +++ D N D +S
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 481 -NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
N + +Q F+ ++ KP TYN L+ A ++ + +A +
Sbjct: 397 LNSYGRSRQPGKAKEVFL-------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G+ PN +S L+ AC S +L + G++ + AY +AI + +
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 509
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L++A +L++ M+ +++ + VT+ L+ R E L +D+
Sbjct: 510 ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G L A+ + ++ PN+ T++ C + +
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+S+ + LN +NS + +NA +L+ + +Y++M+K V AD ++ IL+ C
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E++ L + V +I QM + AG P+ I
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEGQVTEAESIFN--------QMKM--------AGCEPDVI 589
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
++S+++A + +A LF EM G EP+S C+ L++A + Q F L
Sbjct: 590 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 645
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 205/491 (41%), Gaps = 76/491 (15%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC--GICGDYMKSRAIYEDLRS 284
V + + RD AL K P++ +I C G+ Y R +++++++
Sbjct: 182 LVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFR-LFQEMQA 240
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V ++ V+N L+ AH + + +Q G++AD SY L+ + G T
Sbjct: 241 EGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAE 300
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ + E+K + LK Y+T++ ++ Q VK + G++ N IT+
Sbjct: 301 AEALLEEMKWYGLRPNLK----AYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYC 356
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----- 457
LI+A A AGL+++ L++EM PN+ ++ + Q+ + +L R
Sbjct: 357 LLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416
Query: 458 ------------------SWTLSKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFV 497
+ L + ++A + DG D +S D P
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
+Y + PT T+NI++ + V ++ EMR+ G+ PN +++T L+
Sbjct: 477 RKLYYKMVND--GCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLV 534
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYT------TAIKVCVRS------------- 596
D + + A++ L+ M+EDGM P AY+ + +C ++
Sbjct: 535 DVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIE 594
Query: 597 ----------------KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
R ++AF++FE +K + + +TY TL++A R L EV
Sbjct: 595 INLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVS-- 652
Query: 641 LAVYQDMWKAG 651
V+ +M KAG
Sbjct: 653 -GVFDEMIKAG 662
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 132/299 (44%), Gaps = 53/299 (17%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
++ A + P A + + + FG+ R L A A+ + P++ ++ID C G
Sbjct: 413 MQQAGVTPDAHV-YNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAG 471
Query: 271 DYMKSRAIY-----------------------------------EDLRSQNVTLNIYVFN 295
+++R +Y E++RS+ + N+ +
Sbjct: 472 QPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYT 531
Query: 296 SLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
+L++V A F +E + M++ G+ +Y+ L A G + ++ ++ +
Sbjct: 532 TLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLG---MCEQTLHVLQTM 588
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E + + ++++ + ++ F+ A Q A V E + AG+T + IT+++L+ A A
Sbjct: 589 EKENI-EINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEK 647
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+++ +F+EM++AGC P+ + ++L AFR F+ LS + E+Y
Sbjct: 648 LDEVSGVFDEMIKAGCRPDGKAKDMLRS----------AFR-FKERELSPKDKSFAEEY 695
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 172/401 (42%), Gaps = 43/401 (10%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++++ +N+ N +N+L++ ++ L + M++ V ++ +YN LL
Sbjct: 211 ARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270
Query: 333 ACCLAGNTVLAQEIYGEVK----------------HLEAKG--------VLKLDVFTYST 368
C +G A+E+ E++ H G +++D TY
Sbjct: 271 GLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI 330
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A +V ++ GVTP+ I+++ L+NA G V++A+ E+M + G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EPN N ++ E + D A +W + + + I+ K
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHA----ETWVRRMVEKGVSPTVETYNSLINGYGQKG-- 444
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
+FV + + KP +Y L+ C D + A ++ +M G+SP
Sbjct: 445 ------HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +LI+A ++ A + M + G+ +V Y T I R+ R+K+A LF
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+M P+++TY +L+ S Y Q+CL +Y M
Sbjct: 559 LQMAGKGCNPDVITYNSLI---SGYAKSVNTQKCLELYDKM 596
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 166/390 (42%), Gaps = 34/390 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C G K+ + L VT + +N L+N D+K + + M++ G+
Sbjct: 334 GLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEP 393
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ ++N ++ C G A+ V+ + KGV V TY++++ + +
Sbjct: 394 NRITFNTVISKFCETGEVDHAETW---VRRMVEKGV-SPTVETYNSLINGYGQKGHFVRC 449
Query: 383 LKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+ ++M AG+ PN I++ SLIN C + L++ + + +M+ G PN++ N+L++
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI-VLADMIGRGVSPNAEIYNMLIE 508
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNT 493
A + AFR F S L G +G + ++ + N
Sbjct: 509 ASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNP 568
Query: 494 PNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACCTD-YYRVKALMN 537
NS S + K KPT T++ L+ AC + + +
Sbjct: 569 DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQ 628
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM + L P+ + +I + GNV A+ + + M + G+ D V Y + I +R +
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R+ + L ++MK + P + TY L++
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKG 718
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 170/406 (41%), Gaps = 46/406 (11%)
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
H+S P + ++ +C + ++ +Y +R + N L+ V++ +
Sbjct: 83 HVSKP--FFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEK 140
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
TL V+ ++ G D +Y ++A + + E+ +K + G + VF Y+
Sbjct: 141 TLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL---MKSMVKDG-MGPSVFAYN 196
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
++ + + A K+ ++M+ + PNT+T+++LI+ G +E+A+ E M +
Sbjct: 197 LVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRL-------------FRSWTLSKTQVALGED--Y 472
E N N LL + + D A + F S+ G+D +
Sbjct: 257 NVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLF 316
Query: 473 DGNTDRISNMEH-----------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
DG RI + + +++ V N P+ +YNIL
Sbjct: 317 DGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN----------GVTPSKISYNIL 366
Query: 522 MKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ A C + KA++ +M GL PN I++ +I +G V+ A ++ M E G+
Sbjct: 367 VNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGV 426
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
SP V Y + I + + F +EM I+PN+++Y +L+
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLI 472
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 192/468 (41%), Gaps = 58/468 (12%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNE-CQRLLDSGEVEMFVGLMEVLEE 183
R GRI+ VL KL E GV P ++ + +L N CQ G+V+ + E +EE
Sbjct: 337 RVGRIEKAEEVLAKLVENGVTPSKI----SYNILVNAYCQ----EGDVKKAILTTEQMEE 388
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYA------CIVPRADILFCNFVREFGKKRDL 237
L + I + C +V+ A + + P + + + + +G+K
Sbjct: 389 RGLEPNRITFNTVISKFC-ETGEVDHAETWVRRMVEKGVSPTVET-YNSLINGYGQKGHF 446
Query: 238 VSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIYVFN 295
V D K PN+ ++I+ +C D + + + D+ + V+ N ++N
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINC--LCKDRKLIDAEIVLADMIGRGVSPNAEIYN 504
Query: 296 SLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL 353
L+ + LK + M + G+ A + +YN L+ G A++++ +
Sbjct: 505 MLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF---LQM 561
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
KG DV TY++++ +A + Q L++ + M G+ P T+ LI AC G+
Sbjct: 562 AGKGC-NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V +F+EMLQ P+ N ++ + E + ++ +L + V G D D
Sbjct: 621 VTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGN------VMKAMSLHQQMVDQGVDCD 673
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYR 531
T + + + ++ + V + K P TYNIL+K C D+
Sbjct: 674 KVTYNSLILAYLRDRRVSEIKHLVDDM------KAKGLVPKVDTYNILIKGLCDLKDFNG 727
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
EM GL +L NV Q++ +RE+GM
Sbjct: 728 AYFWYREMVERGL--------LL--------NVSMCYQLISGLREEGM 759
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACG 559
YS+ K F P+T + N L++ + + A+ ++ G P+ +++ + A
Sbjct: 110 YSTMRKD-GFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAV 168
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+++ +++K M +DGM P V AY + + +R+K A LF+EM + PN V
Sbjct: 169 MLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTV 228
Query: 620 TYITLLRARSRYGSLHE 636
TY TL+ + G + E
Sbjct: 229 TYNTLIDGYCKVGGIEE 245
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 49/241 (20%)
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+L+ C+ + ++++A L+ M + G P+++ N LL+ V++ F++ +F S
Sbjct: 92 NLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDS 151
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
T +P Y +
Sbjct: 152 GT-----------------------------------------------RPDAVAYGKAV 164
Query: 523 KACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+A D + LM M G+ P+ ++ +++ ++ A ++ M + M
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V Y T I + +++A E MK ++ NLVTY +LL G + + ++
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 641 L 641
L
Sbjct: 285 L 285
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 186/419 (44%), Gaps = 62/419 (14%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR-SQNVTLNIYVF 294
DL A ++ K++ + P+ I ++D C GD + + +++ SQ + L+ +
Sbjct: 373 DLKLAFSLFEEYKQY-NQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQLDEITY 431
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
N+L+ L L +++ M+ +G+ + S+N LL +C +A + E++
Sbjct: 432 NTLIKGCGRKKRLNDALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMR- 490
Query: 353 LEAKGVLKLDVFTYSTIVKVF----ADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINA 407
+ G+ D FTYS +V ++ A+ + E + G P+ I ++SLI+A
Sbjct: 491 -KQYGIFP-DNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDA 548
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C +++ M LF EM EP+S IL++A + + AF++F
Sbjct: 549 CVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFE---------- 598
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
E K K+ N TY L+ AC
Sbjct: 599 ---------------EMKQKKIPIND----------------------VTYGCLVDACVR 621
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS-PDVV 584
+ +AL +++M++ L N + +T +I E A++ +M++ + P+++
Sbjct: 622 NDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFDLMKQSPKTYPNLI 681
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
Y + + V++ L QA LF+E+ +I+P+L+T+ TLL+ R G++ + + + +
Sbjct: 682 TYNSLLDGMVKNGLLNQADKLFQELVDSKIKPDLITFSTLLKGHCRKGNMKRLNETVQI 740
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 158/392 (40%), Gaps = 55/392 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF----NSLMNVNAHDLKFT 308
P + T+ID K+ +E+L+ + + + N L N + DLK
Sbjct: 318 QPTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKLA 377
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ ++ D YN LL AC AG+ ++ E+K
Sbjct: 378 FSLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQ---------------- 420
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
S + + IT+++LI C + A++LFEEM G
Sbjct: 421 ----------------------SQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIG 458
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME--HKD 486
+PN N LL +CV+ + + A+R F + Q + D + ++ ++ H +
Sbjct: 459 IKPNRISFNSLLDSCVKCNKMNIAWRYFEEM---RKQYGIFPDNFTYSILVNGIKTNHSN 515
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGL 544
+ + + + FKP YN L+ AC + + L EM+ +
Sbjct: 516 RDELLRAITLLEQIQETG-----QFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQI 570
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
P+ +++ ILI A G ++ GA +I + M++ + + V Y + CVR+ RL QA
Sbjct: 571 EPSSVTYGILIKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQ 630
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++MK + N V Y T+++ + E
Sbjct: 631 FIDQMKSQNLPINTVLYTTIIKGFCKLNQTEE 662
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 171/444 (38%), Gaps = 71/444 (15%)
Query: 201 CVNKPDVNLA------IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
C+N D+N ++ + + +I + ++ G+K+ L AL ++ K P
Sbjct: 402 CINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIKP 461
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQ------NVTLNIYVFNSLMN-VNAHDLKF 307
N +++D C C + +E++R Q N T +I V N N +L
Sbjct: 462 NRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLR 521
Query: 308 TLEVYKNMQKLGVM-ADMASYNILLKACCLAGNTVLAQEIYGEVKH--LEAKGVLKLDVF 364
+ + + +Q+ G D YN L+ AC E++ E+K+ +E V
Sbjct: 522 AITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSV------ 575
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY ++K + A K+ E+M + N +T+ L++AC ++QA+ ++M
Sbjct: 576 TYGILIKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQM 635
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
N+ +++ + Q + A + F
Sbjct: 636 KSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFDLM------------------------- 670
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTV 542
KQS PN + TYN L+ + + L E+
Sbjct: 671 --KQSPKTYPNLI-------------------TYNSLLDGMVKNGLLNQADKLFQELVDS 709
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ P+ I+++ L+ GN++ + ++IM +SPD ++ C+ ++
Sbjct: 710 KIKPDLITFSTLLKGHCRKGNMKRLNETVQIMTGLQISPDESLLQLILEACLNQQQYHIG 769
Query: 603 FSLFEEMKHYQIQPNLVTYITLLR 626
+F++ H QI + +T++R
Sbjct: 770 VQIFDQFCH-QIPQSTQLLLTIIR 792
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MSPDVVAYTTAIKVCVRSKRLK 600
+ L P I + LID VE A +L MR+ + P +V T I ++ + +
Sbjct: 279 INLHPTDIFFNKLIDYAFRKSQVEMAEYLLVFMRDQAKIQPTIVTINTMIDQYFKNNQRE 338
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRA 627
+A+ FE +K Q +P+ TY TL+
Sbjct: 339 KAWKTFENLKLTQTKPDNFTYTTLING 365
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 175/435 (40%), Gaps = 62/435 (14%)
Query: 216 IVPRAD--ILFCNFVREFG-----KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGI 268
++PR+ + F VR FG K + L +++ + P +++ ++
Sbjct: 8 VLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVR 67
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMAS 326
G Y + +++ L S+ +T +I L+N H L F + + K+G +M +
Sbjct: 68 MGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVT 127
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
+N L+ C+ G A + L AKG LD F+Y +++ + AL++
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLD---LMAKGY-PLDEFSYGSLINGLCKNGQTRDALQLL 183
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ M V PN IT+S++I+ L+ A+ LF + G + N L+ C
Sbjct: 184 QKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSV 243
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
Q+ A RL
Sbjct: 244 GQWREATRLLTMMV---------------------------------------------- 257
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
R + P T+NIL+ A C + V+A + M G P+ +++ L++ S NV
Sbjct: 258 -RGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNV 316
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++ M + G+ PDV+ Y I + + +A LF+E++ + PNL TY +L
Sbjct: 317 SEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL 376
Query: 625 LRARSRYGSLHEVQQ 639
+ + G + VQ+
Sbjct: 377 IDGLCKLGRMSCVQE 391
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 69/405 (17%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTL 289
G+ RD AL+ ++ L PN+ T+ID G+C D + + A+ + + S+ + +
Sbjct: 174 GQTRD---ALQLLQKMEEDLVRPNLITYSTVID--GLCKDRLIADALRLFSLVTSRGILV 228
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NSL++ + + + M + + D ++NIL+ A C G V AQ ++
Sbjct: 229 DVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVF 288
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ K K D+ TY+ +++ F + A ++ M+ G+ P+ + ++ LIN
Sbjct: 289 A----VMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+V++AM LF+E+ PN N L+ C+ R +S Q
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG---LCKLGR---------MSCVQ-- 390
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
E D DR QS P TYNI + A C
Sbjct: 391 --ELVDEMCDR--------GQS-----------------------PDIVTYNIFLDAFCK 417
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDA-CGGSG--NVEGALQILKIMREDGMSPD 582
Y + +L ++ G+ P+ + ++++ C G E ALQ L I G P+
Sbjct: 418 SKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLI---HGCCPN 473
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V YT I + +A +L +M P+ VT+ T++ A
Sbjct: 474 VRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGA 518
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 135/361 (37%), Gaps = 58/361 (16%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+VF+ L+ V + ++ + G+ +A+ IL+ C + A + G
Sbjct: 55 IFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLG 114
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ K + ++ T++T++ F A+ + D+++ G + ++ SLIN
Sbjct: 115 TI----LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGL 170
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
G A+ L ++M + PN + ++ + A RLF T V
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILV-- 228
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT- 527
YN L+ CC+
Sbjct: 229 ---------------------------------------------DVVAYNSLIHGCCSV 243
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L+ M ++P+ ++ IL+DA G + A + +M + G PD+V Y
Sbjct: 244 GQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTY 303
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ S + +A LF M ++P+++ Y L+ Y + V + + ++++
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING---YCKIDMVDEAMVLFKE 360
Query: 647 M 647
+
Sbjct: 361 I 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ +++++R +N+ N+ +NSL++ + E+ M G D+ +YNI L
Sbjct: 353 EAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFL 412
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C + A ++ ++ +G+ D + Y IV+ F + ++A + + +L
Sbjct: 413 DAFCKSKPYEKAISLFRQI----VQGIWP-DFYMYDVIVENFCKGEKLKIAEEALQHLLI 467
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN T++ +INA ++AM L +M C P++ ++ A E + D+
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDK 527
Query: 452 AFRL 455
A +L
Sbjct: 528 AEKL 531
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 149/376 (39%), Gaps = 60/376 (15%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R I +L + N+ +N + L + F V+ + K+G + D ++ L+K
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGL-------IPFAFSVFAKILKMGYVPDTITFTTLIK 163
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL G A + +V L D +Y T++ + AL + + +
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALG----FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGN 219
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V PN + ++++I++ LV +A LF EM+ G P+ + L+ + + A
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
LF L + K
Sbjct: 280 IDLFNKMILE-----------------------------------------------NIK 292
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+NIL+ A C D K + + M G+ PN +++ L+D V A I
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M + G++PD+ +Y+ I + K+ +A +LF+EM I P++VTY +L+ S+
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 631 YGSLHEVQQCLAVYQD 646
G + Q + D
Sbjct: 413 SGRISYALQLVDQMHD 428
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+L NV + + +S+ V + F L + M G+ D+ +Y+ L+ C+ G
Sbjct: 219 NLVQPNVVMYNTIIDSMCKVKLVNEAFDL--FSEMISKGISPDVVTYSALISGFCILGKL 276
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +++ ++ LE +K DV+T++ +V F + V + M+ G+ PN +T
Sbjct: 277 NDAIDLFNKMI-LEN---IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++ V +A +F M Q G P+ Q +I++ + +FD A LF+
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
K + Y D +S I+ V H D+ PT TYN
Sbjct: 393 -RKNIIPDVVTYSSLIDGLSK-----SGRISYALQLVDQMH----DR--GVPPTIRTYNS 440
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ A C + + AL+ +++ G+ PN +++ILI SG +E A ++ + + G
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ +V YT I+ +A +L +M+ P+ TY
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 58/382 (15%)
Query: 242 RAYDASKKHLS---SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+D + +S SP++ +I I G + ++ + +N+ ++Y FN L+
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
N D +K V+ M K G+ + +YN L+ CL A+ I+ + A+
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM----AQ 358
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G + D+ +YS ++ F K + A+ + ++M + P+ +T+SSLI+ + +G +
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ L ++M G P + N +L A + Q D+A L L+K
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL-----LTKL------------ 461
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
KDK +P TY+IL+K C +
Sbjct: 462 --------KDK----------------------GIQPNMYTYSILIKGLCQSGKLEDARK 491
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ + G + N ++TI+I G AL +L M ++G PD Y I
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551
Query: 595 RSKRLKQAFSLFEEMKHYQIQP 616
+ A L EM ++P
Sbjct: 552 KKDENDMAEKLLREMIARGVRP 573
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 133/324 (41%), Gaps = 53/324 (16%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ YN ++ + C L E + + +KG+ DV TYS ++ F
Sbjct: 221 VQPNVVMYNTIIDSMC---KVKLVNEAFDLFSEMISKGI-SPDVVTYSALISGFCILGKL 276
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A+ + M+ + P+ T++ L+NA G +++ +F+ M++ G +PN N L
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + ++A +F T+++ V
Sbjct: 337 MDGYCLVKEVNKAKSIFN--TMAQGGV--------------------------------- 361
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
P +Y+I++ C + L EM + P+ ++++ LID
Sbjct: 362 ------------NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG + ALQ++ M + G+ P + Y + + + ++ +A +L ++K IQPN
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
+ TY L++ + G L + ++
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVF 493
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 45/304 (14%)
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
F ++ I+ +K + L + + M G+ PN + + LIN GL+ A +F +
Sbjct: 86 FEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 145
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---------- 473
+L+ G P++ L++ Q +AF LF VALG +D
Sbjct: 146 ILKMGYVPDTITFTTLIKGLCLKGQIQQAF-LFHDKV-----VALGFHFDQISYGTLIHG 199
Query: 474 ----GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T ++ + ++ +P YN ++ + C
Sbjct: 200 LCKVGETRAALDLLQRVDGNLV--------------------QPNVVMYNTIIDSMCKVK 239
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A L +EM + G+SP+ ++++ LI G + A+ + M + + PDV +
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + ++K+ ++F+ M I+PN VTY +L+ Y + EV + +++ M
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG---YCLVKEVNKAKSIFNTM 356
Query: 648 WKAG 651
+ G
Sbjct: 357 AQGG 360
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 182/428 (42%), Gaps = 50/428 (11%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDG---RLAKPNVEMYNTIID--ALCKYQLVSEAYGLFSEMT 160
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ N+ +++L+ LK L + M + ++ +YNIL+ A C G
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + K +K +V TYST++ + + A V M GVTP+ ++
Sbjct: 221 EAKSVLA----VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN V++A++LF+EM+ + P QF++ F
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFPP--------------IIQFNKILDSFAKMKH 322
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS--HYSSFDKRFS--------- 510
T V+L +E K Q T N + N H FS
Sbjct: 323 YSTAVSLSH----------RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P+T T N L+K C KAL +++ G N +S+ LI+ G+ GA+
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L+ + P+V Y+T I + + + +A+ LF EM I ++VTY TL+
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492
Query: 629 SRYGSLHE 636
G L E
Sbjct: 493 CIVGKLKE 500
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 165/404 (40%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ T+I G+C G K+ ++ L +Q LN + +L+N D + +
Sbjct: 375 PSTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + + ++ Y+ ++ A C L E YG + KG+ DV TYST+
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALC---KYQLVSEAYGLFSEMTVKGI-SADVVTYSTL 488
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A+ + +M+ + P+ T++ L++A G V++A + ML+A
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ N L+ + + +A +F + +L
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL---------------------------- 580
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
P TY IL+ C +AL EM + P+
Sbjct: 581 -------------------MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++++ L+D SG + ++ MR+ G DV+ Y + I ++ L +A +LF
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+MK I+PN T+ LL + G L + Q+ V+QD+ G
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE---VFQDLLTKG 722
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 78/416 (18%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLR 283
N V + G R + LR D L+ PN+ + TIID +C + S A ++ ++
Sbjct: 420 NGVCKIGDTRGAIKLLRKIDG---RLTKPNVEMYSTIID--ALCKYQLVSEAYGLFSEMT 474
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ ++ +++L+ LK + + M + D+ +Y IL+ A
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA-------- 526
Query: 342 LAQEIYGEVKHLEAKGVL--------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
L +E G+VK EAK VL K DVFTY+T++ + + A V M G
Sbjct: 527 LGKE--GKVK--EAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
VTP+ T++ LIN + +V++A++LF+EM Q P++ + L+ ++
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC------KSG 636
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R+ W D I M + + +
Sbjct: 637 RISYVW-----------------DLIDEMRDRGQPA------------------------ 655
Query: 514 TTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + + + AL N+M+ G+ PN ++TIL+D G ++ A ++
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + G DV Y I + L++A ++ +M+ PN VT+ ++ A
Sbjct: 716 QDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
+P+++ +I+ G C M A+ ++++ +N+ + ++SL++ + + +
Sbjct: 584 TPDVHTYTILIN--GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYV 641
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ M+ G AD+ +YN L+ C G+ A ++ ++K +G+ + + FT++
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD---QGI-RPNTFTFTI 697
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A +V +D+L+ G + ++ +I GL+E+A+ + +M + G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR 457
C PN+ +I++ A + + D+A +L R
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLR 786
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
SI N + V S + KR + P T T N L+K C +AL +++ G
Sbjct: 38 SIQNVDDAVSLSVLTKILKR-GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQL 96
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +S+ LI+ G+ A++ L+ + P+V Y T I + + + +A+ LF
Sbjct: 97 NQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLF 156
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
EM I N+VTY TL+ G L E L V
Sbjct: 157 SEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNV 193
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 133/355 (37%), Gaps = 34/355 (9%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K L + + G + SY L+ C G+T A + ++ AK +V
Sbjct: 79 VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKP----NVE 134
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+TI+ + A + +M G++ N +T+S+LI G +++A+ L M
Sbjct: 135 MYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVM 194
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ PN NIL+ A + + A + + + DG
Sbjct: 195 VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDG---YFLV 251
Query: 482 MEHKDKQSITNTPNFV---PNSH-----------YSSFDKRFS-FK-------PTTTTYN 519
E K Q + N + + P+ H DK + FK P +N
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFN 311
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ A Y +L + + G+ P+ + ILI+ G + +L + +
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR 371
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G P V T IK ++K+A +++ Q N V+Y TL+ + G
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
+ F K + + AL + + P+ +++D G+C G + +++R
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD--GLCKSGRISYVWDLIDEMRD 650
Query: 285 QNVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ ++ +NSL++ N H L + ++ M+ G+ + ++ ILL C G
Sbjct: 651 RGQPADVITYNSLIDGLCKNGH-LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
AQE++ + L KG LDV+ Y+ ++ + AL + M G PN +T+
Sbjct: 710 DAQEVF---QDLLTKG-YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG 428
+INA ++A L +M+ G
Sbjct: 766 DIIINALFKKDENDKAEKLLRQMIARG 792
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 177/431 (41%), Gaps = 35/431 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN R + + L S+ PN+ +I+ G K+ ++ ++
Sbjct: 175 FCNEKR----AEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM 230
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + N+ + ++++ A + V++ M GV D +YN L+ G
Sbjct: 231 DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW- 289
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + A G LK D +TY +++ + + A + + M+ G+ PN +
Sbjct: 290 --KEVVRMLEEMSAHG-LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RS 458
LI+ A G + + L M++ G P+ NI+ A + D A +F +
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 459 WTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITN--TPN-FVPNSHYSSF-------- 505
LS V G D R+ + K Q + PN FV NS
Sbjct: 407 QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 506 DKRFSF-------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
K F F +P +N ++ CT +KA L++ M VG P IS+T LI
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIG 526
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G ++ A + L +M G+ PD Y T + R+ R+ A+ +F EM I P
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 617 NLVTYITLLRA 627
+VTY T+L
Sbjct: 587 GVVTYSTILHG 597
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 156/366 (42%), Gaps = 42/366 (11%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTI 369
K M +LG D+ SYN LLK C N A+E E+ H+ A + +V +Y+ +
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFC---NEKRAEEAL-ELLHMMADSQGRSCPPNVVSYAIV 209
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A + +M+ G+ PN +T++++I+ A +V++A +F++M+ G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGE--DYDGNTDRISNMEH 484
+P++ N L+ + ++ R+ + L G +Y N R
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 485 KDKQSITN--TPN----------FVPNSHYSSFDKRFSF------KPTTTTYNILMKACC 526
I PN + S + P +NI+ A
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA-- 387
Query: 527 TDYYRVKALM-------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
Y KA++ N+M+ GLSP+ +++ LIDA G V+ A+ M +G+
Sbjct: 388 ---YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P++ + + + + ++A + EM + I+P++V + T+L G + + Q+
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 640 CLAVYQ 645
+ + +
Sbjct: 505 LIDLME 510
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 152/391 (38%), Gaps = 55/391 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ ++ K+ SP++ +ID G + + + ++ V N
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I+VFNSL+ + E Y M G+ D+ +N +L C G + AQ +
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL-- 505
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ +E G + V +Y+T++ A K + MLS G+ P+ T+++L++
Sbjct: 506 -IDLMERVGT-RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG ++ A +F EML+ G P + +L +F A L+
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL----------- 612
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFKPTTTTYNILMKACC 526
NM KQ N + N S + D+ F L ++ C
Sbjct: 613 ------------NMITSGKQWNIWIYNIILNGLSKNNCVDEAFK----------LFQSLC 650
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ ++++ ++ I+I A SG E A+ + + G+ PDV Y
Sbjct: 651 SKDFQLEI--------------TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ + L++ LF M+ PN
Sbjct: 697 CLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGL------SPNHISWTILIDACGGSGNVEG 566
P TY+IL+ C R+ L + T GL N+I L+ + +
Sbjct: 92 PDPCTYSILIGCFC----RMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147
Query: 567 ALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ---PNLVTYI 622
A+ IL K M E G +PDVV+Y T +K KR ++A L M Q + PN+V+Y
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 623 TLLRA 627
++
Sbjct: 208 IVING 212
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 55/352 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ E++ S V + F +LM + ++ L V M + G + N+L+ C
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ G ++ A G + D TY+T V ALKV + ML G
Sbjct: 277 KMGRV---EDALGYIQKEIADG-FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ T++++IN + G +++A + +M+ GC P++ N L+ A + + A L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T+ P
Sbjct: 393 ARELTVK-----------------------------------------------GLSPDV 405
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+NIL+ A C D + L EM++ G +P+ +++ ILID G + AL +LK
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
M +G V Y T I + R+++A +F++M + I + VT+ TL+
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 154/353 (43%), Gaps = 30/353 (8%)
Query: 290 NIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+++ +N+++N + +L + M G + D ++N L+ A C +E
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL---EEAL 390
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ L KG L DV+T++ ++ + +++ E+M S+G P+ +T++ LI+
Sbjct: 391 DLARELTVKG-LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKT 464
+ G + A+ L +EM GC ++ N ++ A + + + A +F + +S++
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 465 QVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
V DG RI + +Q + + +P+ TYN ++
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMV-----------------KEGLQPSNITYNSIL 552
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + ++ M G + +++ LI+ +G + AL++L+ MR G+
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
P AY I+ R L+ A SLF EM P+ +TY + R R G
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGG 665
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 36/370 (9%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L + V + V+N L+NV A +K VY M G+ D+ + N L+KA C A
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + E+ + + D T++T+++ F + + AL+VK M+ G +P +
Sbjct: 211 VRTAVLMLEEM----SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T + LIN G VE A+ ++ + G EP+ N + C+ CQ S
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVH-CL--CQNGHV-----SH 318
Query: 460 TLSKTQVALGEDYDGNTDRIS--------NMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
L + L E +D + + N E + + I N D+
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVN----------QMVDR--GC 366
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TTT+N L+ A C+ +AL E+ GLSP+ ++ ILI+A G+ ++
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + M+ G +PD V Y I +L A L +EM+ + VTY T++ A
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486
Query: 630 RYGSLHEVQQ 639
+ + E ++
Sbjct: 487 KQMRIEEAEE 496
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 133/599 (22%), Positives = 246/599 (41%), Gaps = 71/599 (11%)
Query: 88 EEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPL 147
E+FA S V E + K + + +++ G+V+ +R + GV++ E A L
Sbjct: 83 EDFA---PSRAVYEEIIQKLGTAGAFDLM-EGLVREMRREGHEAGAGVVRSFVE-SYARL 137
Query: 148 ELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDV 207
FD L++N+ + ++ L+ VL E +K L+ + + +PDV
Sbjct: 138 RRFD-DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS-RMKLLESVYNEMTDRGIQPDV 195
Query: 208 ---NLAIRYAC------------------IVPRADILFCNFVREFGKKRDLVSALRAYDA 246
N I+ C V + F ++ F ++ + +ALR
Sbjct: 196 VTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255
Query: 247 SKKHLSSPNMYICRTIIDVCGICG--------DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+ SP +I+ G C Y++ + I + VT N +V +
Sbjct: 256 MMETGCSPTRVTVNVLIN--GYCKMGRVEDALGYIQ-KEIADGFEPDQVTYNTFV--HCL 310
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
N H + L+V M + G D+ +YN ++ CL+ N L E G V + +G
Sbjct: 311 CQNGH-VSHALKVMDLMLQEGHDPDVFTYNTVIN--CLSKNGEL-DEAKGIVNQMVDRGC 366
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L D T++T++ + AL + ++ G++P+ T++ LINA G +
Sbjct: 367 LP-DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGN 475
LFEEM +GC P+ NIL+ + A L + S ++ V Y+
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT----YNTI 481
Query: 476 TDRI-SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D + M ++ + + + D + T+N L+ C A
Sbjct: 482 IDALCKQMRIEEAEEV-----------FDQMDAH-GISRSAVTFNTLIDGLCKAKRIDDA 529
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
L+ +M GL P++I++ ++ G+++ A IL+ M +G DVV Y T I
Sbjct: 530 TELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLING 589
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ R + A L M+ I+P Y ++++ R +L + L+++++M + G
Sbjct: 590 LCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA---LSLFREMTEVG 645
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 134/339 (39%), Gaps = 56/339 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SP++Y +I+ GD ++E+++S + +N L++ + L L+
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K M+ G +YN ++ A C A+E++ + ++A G+ + V T++T++
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ---MDAHGISRSAV-TFNTLI 517
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
AK A ++ E M+ G+ P+ IT++S++ G +++A + E M G E
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ L+ +A + A +L R +
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIK---------------------------- 609
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNH 548
+PT YN ++++ + +L EM VG P+
Sbjct: 610 -------------------GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650
Query: 549 ISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAY 586
+++ I+ C G G ++ A L M G P+ ++
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSF 689
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 168/395 (42%), Gaps = 25/395 (6%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
T I V G+C G + R + ED Q NI +N+L++ D++ ++ ++
Sbjct: 188 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 247
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + + +Y ++ C G+ + E + ++G L ++V Y+TI+
Sbjct: 248 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLME---MNSRG-LTVNVQVYNTIIDARYKH 303
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
A++ E M+ G P+ +T+++LI+ G V +A L E+ L G PN
Sbjct: 304 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 363
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L+ A + +DRA +W + T+ D + + + + T
Sbjct: 364 TPLIHAYCKQGGYDRA----SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR- 418
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+R F P YNILM C + K L+ EM + P+ + L
Sbjct: 419 ------EKMLERGVF-PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 471
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
+D +GN++ A ++ ++ E GM+P +V Y IK + +K A + MK +
Sbjct: 472 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 531
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
P+ TY T++ Y H++ ++++M K
Sbjct: 532 APDEFTYSTVIDG---YVKQHDLDGAQKMFREMVK 563
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 55/386 (14%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
+I+F N + + KK D+ A + K P + II+ G C GD+
Sbjct: 219 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN--GFCKKGDFKAIDR 276
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ ++ S+ +T+N+ V+N++++ + H +K +E + M + G D+ +YN L+
Sbjct: 277 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK-AVETIEGMIECGCKPDIVTYNTLISGS 335
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C G A ++ ++ KG++ + F+Y+ ++ + + A +M G
Sbjct: 336 CRDGKVSEADQL---LEQALGKGLMP-NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH 391
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T+ +L++ AG V+ A+ + E+ML+ G P++ NIL+
Sbjct: 392 KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG------------ 439
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI--------TNTPNFVPNSHYSSFD 506
L + + L ++ L E D QS+ T F+ N +
Sbjct: 440 LCKKFKLPAAKLLLAEMLD--------------QSVLPDAFVYATLVDGFIRNGNLDEAR 485
Query: 507 KRFSF------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDAC 558
K F P YN ++K C A+ +N M+ L+P+ +++ +ID
Sbjct: 486 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 545
Query: 559 GGSGNVEGALQILKIMREDGMSPDVV 584
+++GA ++ + M + P+V+
Sbjct: 546 VKQHDLDGAQKMFREMVKMKCKPNVM 571
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 197/438 (44%), Gaps = 29/438 (6%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + F K L +D + SPN+ + +I+ G C G + ++ A+
Sbjct: 81 VVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN--GFCKKGLWREATAVL 138
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++Y + ++ D + L+++ M + G +YN+L+ C
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VT 395
G A +I+ + + KG +L+V +Y+T++ + A+K+ +L G V
Sbjct: 199 GCIGDAFKIF---ETMLEKGK-RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ IT++++I G +++A+ +++ M++ G N C+IL+ +++ D+A L
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
++ V Y D M + NF S K PT
Sbjct: 315 WKR-VHKLGLVPSSTTYSVMIDGFCKM---------HMLNFAKG--LFSRMKISGLSPTL 362
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN LM + C + + + L EM+ P+ IS+ I+ID +G++ A ++L
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ G++PD Y++ I + ++++A F+ M I P+ Y +L++ +G
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG---FGL 479
Query: 634 LHEVQQCLAVYQDMWKAG 651
E+++ + + + M G
Sbjct: 480 NDEIEEVINLLRQMADMG 497
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 185/436 (42%), Gaps = 29/436 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
+C + K+ + A+R K+ ++ + T+I G C G + +A++++
Sbjct: 48 YCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLIS--GFCSKGCLDRGKALFDE 105
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ N+ V++ L+N + V M + G+ D+ +Y ++ C G
Sbjct: 106 MLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR 165
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +++ + KG + TY+ ++ A K+ E ML G +
Sbjct: 166 ARKALDLF---DLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAG--CEPNSQCCNILLQACVEACQFDRAFRLFR 457
++++LI N G +++AM LF +L+ G EP+ N ++Q + + D+A ++
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY- 280
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
T + G + T I E+ I H + P++TT
Sbjct: 281 -----DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH------KLGLVPSSTT 329
Query: 518 YNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y++++ C + K L + M+ GLSP + L+ + ++E A ++ + M+
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E PD +++ I +++ + A L +M+ + P+ TY + + S+ G +
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449
Query: 636 EVQQCLAVYQDMWKAG 651
E + + M +G
Sbjct: 450 EAK---GAFDSMIASG 462
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 185/432 (42%), Gaps = 51/432 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P++ TII+ G+C + +A+ ++ + N + + LM+ ++ +
Sbjct: 8 PDIVSYNTIIN--GLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M++ G+ D+ Y+ L+ C G + ++ E+ LE KG+ +V YS +
Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM--LE-KGI-SPNVVVYSCL 121
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F W+ A V M G+ P+ T++ +I G +A+ LF+ M + G
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 430 EPNSQCCNILLQA-CVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRIS 480
EP++ N+L+ C E C D AF++F R +S + +G +G D
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGD-AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE-- 238
Query: 481 NMEHKDKQSITNTPNFV-PN---------------------SHYSSFDKRFSFKPTTTTY 518
K S+ N+V P+ Y + +R SF T +
Sbjct: 239 --AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 519 NIL---MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
++ +K+ D + L + +GL P+ +++++ID + A + M+
Sbjct: 297 ILIGEYIKSGIID--KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+SP + Y T + + L+QA LF+EMK +P+ +++ ++ + G +H
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414
Query: 636 EVQQCLAVYQDM 647
++ L Q M
Sbjct: 415 SAKELLNDMQQM 426
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KR + P +YN ++ C + KA L+ EM PN ++ IL+D G V
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A+++L M+ G+ DVV Y+T I L + +LF+EM I PN+V Y L
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + G E AV M + G
Sbjct: 122 INGFCKKGLWREAT---AVLHTMTERG 145
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+ + PD+V+Y T I + KRL++A L EM+ +PN TY L+ + G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 634 LHEVQQCLA 642
+ E + L
Sbjct: 61 VEEAMRLLG 69
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M+ + + P+ +S+ +I+ +E A+ +L M P+ Y + + R
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++A L EMK ++ ++V Y TL+ G L + A++ +M + G
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK---ALFDEMLEKG 110
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEV 311
P++ +ID G Y K+ + Y +L T + Y + L+ V
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 155
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 156 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLIN 211
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG EP
Sbjct: 212 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 271
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEHK 485
+ N L++A + RA + + + +G + D + I H+
Sbjct: 272 DVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 325
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D Q++ KR PT ++ +L+ A + + ++N+M G
Sbjct: 326 DAQAVFEV------------MKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 373
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 374 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARME 433
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 434 ELFRSLPARNLIPDVVTWTSRIGAYSRR---KQYNRCLEVFEEMIDAG 478
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 138/316 (43%), Gaps = 29/316 (9%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 45 SNRIWGSLDSLSPNHTTWDDIINVA--VQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 102
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 103 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 162
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTT 517
+ V DG M+ D Q F+ KR +P+T T
Sbjct: 163 GFPPSAVVYNAYIDG------LMKGGDTQKAVEI-----------FERMKRDRCQPSTAT 205
Query: 518 YNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y +L+ + Y + +EMR+ PN ++T L++A G E A +I + ++
Sbjct: 206 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 265
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
E G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LH
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LH 324
Query: 636 EVQQCLAVYQDMWKAG 651
E Q AV++ M + G
Sbjct: 325 EDAQ--AVFEVMKRLG 338
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 165 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 224
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 225 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 284
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 285 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 340
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 396
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 106/288 (36%), Gaps = 69/288 (23%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK AL+ + + PN+ +++ G K+ I+E L+ + +
Sbjct: 213 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI------------------- 329
+Y +N+LM A E++ MQ +G D ASYNI
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 330 ----------------LLKACCLAGNTVLAQEI----------------------YGEVK 351
LL A AG +EI YG +
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 392
Query: 352 HLEA---------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
E KG D+ TY+ ++ ++ A ++ ++ + + + P+ +TW+
Sbjct: 393 QFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWT 452
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC-NILLQACVEACQF 449
S I A + + + +FEEM+ AGC P+ N+LL+ + F
Sbjct: 453 SRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVLLKVAIFMASF 500
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 168/393 (42%), Gaps = 26/393 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
II + G K+ AI+ ++++ + +NS++ + H+ ++ E+Y M G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220
Query: 320 -VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D +Y+ L+ A C G A + E+K + K+ Y+ ++ +
Sbjct: 221 QCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKI----YTMLMALLFKLDN 276
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + E+M P+ T++ LI AG +++A + F EM + GC P++ N
Sbjct: 277 VHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNN 336
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A + D A +LF +T + NT + E K + S
Sbjct: 337 MINFLGKAGRLDDAIKLFEEM---ETLRCIPSVVTYNTIIKALFESKSRVS--------- 384
Query: 499 NSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTI 553
SS+ +R P+ TY+IL+ C KA+M EM G P ++
Sbjct: 385 --EISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA G + + A ++ + ++E+ S Y IK ++ RL A LF+EM
Sbjct: 443 LIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLG 502
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
PN+ Y L+ +R G L E + QD
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQD 535
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 197/486 (40%), Gaps = 49/486 (10%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V++ E ++++Q V P C+V ++ + +R G + + A+ +
Sbjct: 132 VEQYGEMWKMIQEMVRNP--------VCVVTPMEL--SDIIRMLGNAKMISKAVAIFYQI 181
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL-NIYVFNSLMN----VNA 302
K P + ++I + G+Y K +Y ++ ++ + +++L++ +
Sbjct: 182 KARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGR 241
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D L M+ G+ Y +L+ N A ++ E++H + D
Sbjct: 242 QDSAIWL--LNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRH----QYCRPD 295
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
VFTY+ +++ A A +M G P+T+ +++IN AG ++ A+ LFE
Sbjct: 296 VFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFE 355
Query: 423 EMLQAGCEPNSQCCNILLQACVEA----CQFDRAFRLFRSWTLSKTQVALGEDYDG--NT 476
EM C P+ N +++A E+ + F + +S + DG T
Sbjct: 356 EMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKT 415
Query: 477 DRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
+R +E D++ P S + K + + L + C + RV
Sbjct: 416 NRTEKAMMLLEEMDEKGFPPCPA-AYCSLIDALGKAKRYDLANELFQELKENCGSSSARV 474
Query: 533 KALM-----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
A+M +EM +G +PN ++ L+ +G ++ AL ++ M+
Sbjct: 475 YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G PD+ +Y + ++ +A + MK I+P+ V+Y T+L A S G
Sbjct: 535 DHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFE 594
Query: 636 EVQQCL 641
E + +
Sbjct: 595 EAAKLM 600
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 39/365 (10%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
++E++R Q +++ + L+ A L + M++ G D N ++
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL 341
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK--------WWQMALKVK 386
AG A +++ E++ L V TY+TI+K ++K W+
Sbjct: 342 GKAGRLDDAIKLFEEMETLRCIP----SVVTYNTIIKALFESKSRVSEISSWF------- 390
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E M +G++P+ T+S LI+ E+AM L EEM + G P L+ A +A
Sbjct: 391 ERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
++D A LF+ L E+ ++ R+ + K + V FD
Sbjct: 451 KRYDLANELFQE---------LKENCGSSSARVYAVMIKHLGKAGRLDDAV-----DLFD 496
Query: 507 K--RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSG 562
+ R P YN LM +AL M M+ G P+ S+ I+++A +G
Sbjct: 497 EMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A+ +L M++ + PD V+Y T + + ++A L +EM +L+TY
Sbjct: 557 GPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYS 616
Query: 623 TLLRA 627
++L A
Sbjct: 617 SILEA 621
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVD 493
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ G + D+ SYNI+L A
Sbjct: 494 LFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALA 553
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A + +K + +K D +Y+T++ + A ++ A K+ ++M + G
Sbjct: 554 KTGGPDRAMGMLCNMK----QSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFD 609
Query: 396 PNTITWSSLINACANAGLVEQ 416
+ IT+SS++ A G V+Q
Sbjct: 610 YDLITYSSILEAI---GKVDQ 627
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 180/415 (43%), Gaps = 29/415 (6%)
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFN 295
D++ A +D + P + ++ Y + ++Y +R ++ +++ N
Sbjct: 70 DVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLN 129
Query: 296 SLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC---CLAGNTVLAQEIYGEV 350
L N N + + L + + G + D+ +YN L+K C G+ A+EI+ E+
Sbjct: 130 ILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM 189
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K A+G++ +V +YS++V F A + + ++ +M+ GV PN + ++ LI+
Sbjct: 190 K---AQGMIP-NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCK 245
Query: 411 AGLV---EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A LF M GCE N IL+ + + + A L+ QV
Sbjct: 246 EGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP----QVG 301
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ + ++ + K N V + S D + Y I + C
Sbjct: 302 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVD--------SCIYVIFLDGLCK 353
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + L NE+++ + S++ LID +G VE A + K + ++G+ P+VV
Sbjct: 354 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 413
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITLLRARSRYGSLHEV 637
I R +++ +A LFE+M+ + P+++TY TLLR L EV
Sbjct: 414 CNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 468
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 9/241 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVC---GICGDYMKSRAI 278
I + + V F L + R ++ PN+ +ID+ G GD +R +
Sbjct: 199 ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKL 258
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCL 336
+ + S+ N + L+N K + +Y M ++G ++ +Y+ LL
Sbjct: 259 FLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQ 318
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A +++G +K A G+ +D Y + A+++ ++ S
Sbjct: 319 TGKVGDANKLFGVMK---ASGI-SVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKL 374
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ ++S LI+ AG VE A F+++ Q G +PN CNI++ Q D+A LF
Sbjct: 375 DFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILF 434
Query: 457 R 457
Sbjct: 435 E 435
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 101/289 (34%), Gaps = 55/289 (19%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC---ANAGLVE 415
L D+FT + + + L +L G P+ +T+++LI G +
Sbjct: 121 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHED 180
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A +FEEM G PN + L+ A + + + RLF Q
Sbjct: 181 EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQ---------- 230
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-----DYY 530
P +N+L+ C D
Sbjct: 231 -------------------------------------PNLVQFNVLIDILCKEGKIGDLS 253
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L M + G N IS+TILI+ VE A+ + M + G P+V Y+T +
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 313
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+++ ++ A LF MK I + Y+ L + G L E +
Sbjct: 314 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 362
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 108/287 (37%), Gaps = 51/287 (17%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ ++ A + + M AG++P+ T + L N N V + + +
Sbjct: 92 SFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGI 151
Query: 425 LQAGCEPNSQCCNILLQACVEACQF---DRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
L+ G P+ N L++ C+ D A +F
Sbjct: 152 LRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFE------------------------ 187
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
E K + I PN + YSS F C K L NEM
Sbjct: 188 -EMKAQGMI---PNVI---SYSSLVHGF--------------CCAGKLEESKRLFNEMVD 226
Query: 542 VGLSPNHISWTILIDAC---GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
G+ PN + + +LID G G++ A ++ M G + ++YT I + +
Sbjct: 227 QGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWK 286
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+++A +L+ EM +PN+ TY TLL + G + + + V +
Sbjct: 287 VEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMK 333
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 500 SHYSSFDKRFS------FKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHIS 550
+HYS ++ P T NIL C + RV A M + G P+ ++
Sbjct: 104 NHYSQLFSLYNKMRLAGLSPDLFTLNILANCLC-NLNRVSEGLAAMTGILRRGYIPDIVT 162
Query: 551 WTILIDACGG---SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ LI G G+ + A +I + M+ GM P+V++Y++ + + +L+++ LF
Sbjct: 163 YNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFN 222
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM +QPNLV + L+ + G + ++ ++ M G
Sbjct: 223 EMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKG 266
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ ++ D SY+ L+ C AG +A E + K L +G L+ +V T +
Sbjct: 361 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF---KQLSQEG-LQPNVVTCNI 416
Query: 369 IVKVFADAKWWQMA---LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ F + A + E M G TP+ IT+++L+ + +E+ ++L +M
Sbjct: 417 MIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 476
Query: 426 Q 426
+
Sbjct: 477 K 477
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 179/418 (42%), Gaps = 77/418 (18%)
Query: 248 KKHLSSPNMYICRTIIDVC--GICGDYMKSRAIYEDL-RSQNV-TLNIYVFNSLMN--VN 301
K+ +S + + ++ +C G+ G+ + A+ E L R + + L++ +N+L++
Sbjct: 143 KRGVSWDGVTVSTALVGLCRTGLVGE---AAALAEMLVRGRGIDGLDVVGWNALIDGYCK 199
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
D+ L V + M GV D+ YN L+ +G+ A E+ V+ ++A GV +
Sbjct: 200 VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEV---VERMKADGV-EP 255
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+V TY+ ++ + K A + E M+ +GV P+ +T S+L++ G +A LF
Sbjct: 256 NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALF 315
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G PN L+ + +A + + L +S+ V Y DR+
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM-VSRGVVMDLVMYTALMDRLGK 374
Query: 482 ----MEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
E KD QS TPNFV
Sbjct: 375 EGKIEEAKDVLRHAQSDNITPNFV------------------------------------ 398
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++T+L+DA +GN++GA Q+L M E + P+VV +++ I
Sbjct: 399 ----------------TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
V+ L +A +MK I PN+VTY TL+ ++ + L VY+DM G
Sbjct: 443 VKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF---QGQEAALDVYRDMLHEG 497
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 168/408 (41%), Gaps = 35/408 (8%)
Query: 254 PNMYICRTIID------VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
PN+ +II+ G DYM+ ++ + N+ + +L++
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRK------MKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ L+VY++M GV A+ + L+ GN A+ ++ K ++ +G+L LD
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALF---KDMDERGLL-LDHVN 539
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+T++ A KV ++++ ++P+ + ++ IN G +A +EM
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G EP+ N ++ A + +A +L + + + L T + +E
Sbjct: 600 NTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL---ITYTTLVVGLLE-- 654
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVG 543
+ F+ N S+ F PT+ T+ +++AC + + M G
Sbjct: 655 --AGVVKKAKFLLNEMASA-----GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAG 707
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L + + L+ G A +L M G++PD + + I +S L AF
Sbjct: 708 LHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++ +M H + PN+ T+ TLL G + E L+ DM K G
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS---DMKKVG 812
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 179/434 (41%), Gaps = 58/434 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + F K + +AL Y N ++ ++++ G+ + A+++D
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + L+ + +LM+ ++ +V + + + + D YN+ + C G
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGK 587
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ E+++ L+ D TY+T++ ALK+ ++M + PN I
Sbjct: 588 FSEAKSFLKEMRNTG----LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ AG+V++A L EM AG P S +LQAC + + D +
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIH--- 700
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ +G H D T YN
Sbjct: 701 -----ELMMGAGL-----------HAD----------------------------ITVYN 716
Query: 520 ILMKA-CCTDYYR-VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ CC R +++EM T G++P+ I++ LI S +++ A I M
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+SP++ + T + + R+ +A ++ +MK ++PN +TY L+ + Y
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV---TGYAKKSNK 833
Query: 638 QQCLAVYQDMWKAG 651
+ L +Y +M G
Sbjct: 834 VEALRLYCEMVSKG 847
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/424 (18%), Positives = 164/424 (38%), Gaps = 82/424 (19%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
SP+ + I+ G + ++++ +++R+ + + +N+++ + K + L+
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ-------------------------- 344
+ K M++ + ++ +Y L+ AG A+
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACS 688
Query: 345 -----EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
++ E+ L L D+ Y+T+V V + A V ++ML+ G+ P+TI
Sbjct: 689 GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI 748
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + ++ A ++ +ML G PN N LL + A R+ +
Sbjct: 749 TFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG------LESAGRIGEAD 802
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T+ +S+M K+ +P TY+
Sbjct: 803 TV-----------------LSDM------------------------KKVGLEPNNLTYD 821
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
IL+ +V+A L EM + G P ++ L+ +G + A ++ M+
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ Y + + + + L ++MK +P+ T ++ RA SR G E
Sbjct: 882 GVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEA 941
Query: 638 QQCL 641
++ L
Sbjct: 942 RRLL 945
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
AIY + Q ++ NI FN+L+ +A + V +M+K+G+ + +Y+IL+
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
N V A +Y E + +KG + TY++++ FA A A ++ +M GV
Sbjct: 828 AKKSNKVEALRLYCE---MVSKGFIP-KASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ T+ L+N + + L ++M + G +P+ + + +A A R
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943
Query: 455 LFRS 458
L ++
Sbjct: 944 LLKT 947
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 187/427 (43%), Gaps = 43/427 (10%)
Query: 222 ILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
++F N + + + KK DL A R K P + +I+ G C G++ +
Sbjct: 236 VVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALIN--GFCKAGEFEAVDQL 293
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKA 333
++ ++ + +N+ VFN++++ + K+ L E + M ++G D+ +YN ++
Sbjct: 294 LTEMAARGLNMNVKVFNNVIDA---EFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINF 350
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A E + K +G+L + F+Y+ ++ + + A + + G
Sbjct: 351 SCKGGRIKEADEFLEKAKE---RGLLP-NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIG 406
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
P+ +++ + I+ G ++ A+ + E+M++ G P++Q N+L+ + +F A
Sbjct: 407 EKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP-AM 465
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF---- 509
+L S L + N++ T F+ N K F
Sbjct: 466 KLLLSEMLDR-----------------NVQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508
Query: 510 --SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P YN ++K C AL +N+M+ V +P+ +++ +ID ++
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M + P+V+ YT+ I + + +A +F MK + + PN+VTY TL+
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628
Query: 626 RARSRYG 632
+ G
Sbjct: 629 GGFFKAG 635
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 157/404 (38%), Gaps = 26/404 (6%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS-QNVTLNIYVFNSLMN--VNAHDL 305
+HL P +I G G ++ ++ +R N + NSL+N V + +
Sbjct: 120 QHLK-PTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKV 178
Query: 306 KFTLEVYKNMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L++Y M + G + D + +I++K C G + + VK KG +
Sbjct: 179 DVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRL---VKDRWGKGCVPH 235
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
VF Y+ I+ + Q A + +++ GV P T+ +LIN AG E L
Sbjct: 236 VVF-YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLL 294
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM G N + N ++ A + +A R ++ G D I N
Sbjct: 295 TEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMA----EMGCGPDITTYNTMI-N 349
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
K + I F+ + K P +Y LM A C DY + ++ +
Sbjct: 350 FSCKGGR-IKEADEFLEKA------KERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRI 402
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G P+ +S+ I G ++ AL + + M E G+ PD Y + ++ R
Sbjct: 403 AEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRF 462
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
L EM +QP++ + TL+ R G L E + V
Sbjct: 463 PAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKV 506
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 55/277 (19%)
Query: 217 VPRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYICR 260
V A +LF + E G+K DLVS AL + + P+ I
Sbjct: 393 VKAAGMLF--RIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQ 316
++ G+C G + + + ++ +NV ++YVF +LM+ + +L ++++K +
Sbjct: 451 VLMS--GLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508
Query: 317 KLGVMADMASYNILLKACCLAG-------------NTVLAQEIY-------GEVKHLEAK 356
+ GV + YN ++K C G N A + Y G VK +
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568
Query: 357 GVLKL-----------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
LK+ +V TY++++ F A KV M S + PN +T+++L+
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
AG E+A +FE ML GC PN + L+
Sbjct: 629 GGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLING 665
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 117/299 (39%), Gaps = 64/299 (21%)
Query: 124 IREGRIDCVVGVLKKLNELGVAP---------LELFDGSGFKLLKNECQRLLDSG---EV 171
+ G ID + V +K+ E GV P L F +K +LD +V
Sbjct: 422 VVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDV 481
Query: 172 EMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
+F LM+ + ELDE +I ++ + K + Y ++ FC +F
Sbjct: 482 YVFATLMDGF----IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG----FC----KF 529
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK D +S L + K +P+ Y T+ID Y+K
Sbjct: 530 GKMTDALSCL---NKMKNVHHAPDEYTYSTVID------GYVKQ---------------- 564
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
HD+ L+++ M K ++ +Y L+ C + + A++++ +K
Sbjct: 565 -----------HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMK 613
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ L +V TY+T+V F A + A + E ML G PN T+ LIN N
Sbjct: 614 SFD----LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 99/301 (32%), Gaps = 65/301 (21%)
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + SSL+ A+ + + + E M +P + + L+ A E+ DRA +LF
Sbjct: 90 DGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLF 149
Query: 457 RS---------WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ ++ + G G D + K Q+ T V N S K
Sbjct: 150 HTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVK 209
Query: 508 RF-------------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
P YN+++ C D + E++ G+ P
Sbjct: 210 GLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLP 269
Query: 547 NHISWTILIDACGGSGNVEGALQIL----------------------------------- 571
++ LI+ +G E Q+L
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETM 329
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E G PD+ Y T I + R+K+A E+ K + PN +Y L+ A +
Sbjct: 330 RRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQ 389
Query: 632 G 632
G
Sbjct: 390 G 390
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 163/392 (41%), Gaps = 59/392 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN I T++ G+C G+ KS ++ + +Q +N + +L+N + + +
Sbjct: 200 PNTIILTTLMK--GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + ++ D+ YN ++ C L E Y + ++G+ DV TYST+
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLC---KDKLVNEAYDFYTEMNSRGIFP-DVITYSTL 313
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A A + +M + P+ T++ LI+A G +++A +L M + G
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN + L+ + A ++F + +T+V
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV--QTEV----------------------- 408
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
P+ +YNI++ C +A L+ EM + PN
Sbjct: 409 ----------------------NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LID SG + AL ++K + G DV+ YT+ + +++ L +A +LF
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+MK IQPN TY L+ + L Q+
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 130/329 (39%), Gaps = 53/329 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ Y M G+ D+ +Y+ L+ CLAG + A + E + K + DV+TY+ +
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE---MTLKNI-NPDVYTYTIL 348
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A + M GV PN +T+S+L++ G V A +F M+Q
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ NI++ + D A L R M HK
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLRE-----------------------MLHK---- 441
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
N VPN T TYN L+ C A LM E+ G +
Sbjct: 442 -----NVVPN---------------TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++T L+D + N++ A+ + M+E G+ P+ YT I + RLK A LF+
Sbjct: 482 VITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQ 541
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ ++ TY ++ + G L E
Sbjct: 542 HILVKGCCIDVYTYNVMIGGLCKEGMLDE 570
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 15/293 (5%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E KG+ + D+ T S ++ F + V +L G PNTI ++L+
Sbjct: 156 KQMEVKGI-EPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCL 214
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V++++H ++++ G + N LL + + A +L R T+ +
Sbjct: 215 KGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVM 274
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
Y+ D + KDK + +F Y+ + R F P TY+ L+ C
Sbjct: 275 -YNTIIDGLC----KDKL-VNEAYDF-----YTEMNSRGIF-PDVITYSTLICGFCLAGQ 322
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ A L+NEM ++P+ ++TILIDA G ++ A +L +M ++G+ P+VV Y+T
Sbjct: 323 LMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYST 382
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + A +F M ++ P++ +Y ++ + S+ E L
Sbjct: 383 LMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 255 NMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
N +C I + G+C A + ++ +NV N +NSL++ + T L+
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALD 468
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ K + G AD+ +Y LL C N A ++ ++K +G+ + + +TY+ ++
Sbjct: 469 LMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKE---RGI-QPNKYTYTALI 524
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A K+ + +L G + T++ +I G++++A+ + +M GC
Sbjct: 525 DGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCI 584
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
P++ I++++ E + D+A +L
Sbjct: 585 PDAVTFEIIIRSLFEKDENDKAEKLLH 611
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 40/181 (22%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV--GLSPNHISWTILIDACGGSGNVE 565
+ ++P T LMK C K+L + V G N +S+ L++ G
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254
Query: 566 GALQILKI-----------------------------------MREDGMSPDVVAYTTAI 590
A+++L++ M G+ PDV+ Y+T I
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ +L AFSL EM I P++ TY L+ A + G L E + L V M K
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGV---MTKE 371
Query: 651 G 651
G
Sbjct: 372 G 372
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN ++ID G+C G + + ++L + ++ + SL++ +L +
Sbjct: 445 PNTVTYNSLID--GLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI 502
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G+ + +Y L+ C AQ+++ +H+ KG +DV+TY+ +
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLF---QHILVKGCC-IDVYTYNVM 558
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ AL +K M G P+ +T+ +I + ++A L EM+ G
Sbjct: 559 IGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 22/270 (8%)
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC----------CNILL 440
+ G+ PN +T S LIN + G + + + ++L+ G +PNS C I L
Sbjct: 4 AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKL 63
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+E DR+ R + S + H SI + V +
Sbjct: 64 PRMIE----DRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHD----VVHD 115
Query: 501 HYSSFDKRFSFK--PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
S F+ + P+ + ++ + + +L +M G+ P+ ++ +ILI+
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
G + + +L + + G P+ + TT +K +K++ +++ Q
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
N V+Y TLL + G + L + +D
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIED 265
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 192/449 (42%), Gaps = 40/449 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLN 290
K D+ L ++ K SP ++I +ID G+C + +++++ ++ + +
Sbjct: 564 KLSDVGKGLELFNRMKHDRISPTVFIYNVLID--GLCKVRQMKDAEQLFDEMLARRLLPS 621
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ D + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 622 LITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLT 681
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K +G + D FT+S + ++ AL V E + +G+ N T S L+NA
Sbjct: 682 EMKD---QGFVP-DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------- 460
G +E+A + + G PN N ++ A +
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797
Query: 461 -----LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
L +T LG D + ++ M+ K T N + + FDK F
Sbjct: 798 LAYNCLIRTFCELG-DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLK 856
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SPN + +LID C G
Sbjct: 857 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKG 916
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + + M + G+ ++V Y T I + +L +A + E+ ++P++ TY
Sbjct: 917 KIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYN 976
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ S Y VQ+C+A+Y++M +G
Sbjct: 977 SLI---SGYRFAGNVQRCIALYEEMKTSG 1002
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 172/447 (38%), Gaps = 77/447 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP ++L+ + + +K DLV A DA +K P+ +I GD +
Sbjct: 758 LVPN-EVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENA 816
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
++ + V+ ++ +N L+ +F ++ K M+ G M ++ SY L+
Sbjct: 817 EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINC 876
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ +L +I VK DM G
Sbjct: 877 LC-KGSKLLEAQI--------------------------------------VKRDMEDRG 897
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ--------ACVE 445
V+PN ++ LI+ C + G +E A EEM + G E N N L+ A E
Sbjct: 898 VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAE 957
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ + + + + + G + GN R + + K S
Sbjct: 958 DMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTS---------------- 1001
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KPT TY++L+ C + + K + EM L P+ + + ++ G++
Sbjct: 1002 ----GIKPTLKTYHLLISLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDM 1054
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ A + K M E + D Y + I ++ +L + SL +EMK +++P TY +
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + + + Y++M + G
Sbjct: 1115 VKG---HCEMKDYMGAYVWYREMQEKG 1138
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 147/367 (40%), Gaps = 47/367 (12%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 583
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ + + A ++ ++ML+ + P+ IT+++LI+ G E++
Sbjct: 584 SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ LF++ + + L
Sbjct: 644 VRERMKADNIEPSLITFNTLLKG------------LFKAGMVEDAENVL----------- 680
Query: 480 SNMEHKDKQSITNTPNF-VPNSHYSSFDKRFS------------FKPTTTTYNILMKACC 526
E KD+ + + F + YSS DK + K T +IL+ A C
Sbjct: 681 --TEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ KA ++ GL PN + + +ID G++ GA + M + GM PD +
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
AY I+ ++ A +MK + P++ TY L+ YG +E +C +
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDLL 855
Query: 645 QDMWKAG 651
++M G
Sbjct: 856 KEMEDNG 862
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 187/437 (42%), Gaps = 53/437 (12%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R F + D+ +A + + K SP++ +I G ++ K + +++
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N+ + +L+N K LE V ++M+ GV ++ YN+L+ CC G
Sbjct: 863 TMPNVVSYGTLINCLCKGSKL-LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI--- 918
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML----SAGVTPNTI 399
++ + + + KG+ +L++ TY+T++ D L EDML G+ P+
Sbjct: 919 EDAFRFSEEMFKKGI-ELNLVTYNTLI----DGLSMNGKLAEAEDMLLEISRKGLKPDVF 973
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV-EACQFDRAFRLFRS 458
T++SLI+ AG V++ + L+EEM +G +P + ++L+ C E + + ++F
Sbjct: 974 TYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTK--KIFGE 1031
Query: 459 WTLSKTQVALGE-----DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+L + G+ D+ N++ KQ I + DK
Sbjct: 1032 MSLQPDLLVYNGVLHCYAVHGDMDKAFNLQ---KQMIEKS---------IGLDK------ 1073
Query: 514 TTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN IL + V++L++EM+ + P ++ I++ + GA
Sbjct: 1074 --TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWY 1131
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M+E G+ DV + R K+A ++ EM ++ +V RS
Sbjct: 1132 REMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIVDEDLSATERS-- 1189
Query: 632 GSLHEVQQCLAVYQDMW 648
E Q+C V QD +
Sbjct: 1190 ---FENQEC--VLQDKY 1201
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R G+ P+ S T+L+D + + + + E P Y AI+ V+
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + LF MKH +I P + Y L+ + + + +Q
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQ 608
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 57/386 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+++I + C G Y K + +++ S + N+Y++ + D K ++
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+K GV+ ++ +Y+ ++ C GN A +Y E+ E L +V + T+V
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE----LLPNVVVFGTLVD 312
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A+ A + M+ GV PN ++ LI+ +G + +A+ L EM P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 432 NSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ IL+ C+E Q A RLF Q +
Sbjct: 373 DVFTYTILINGLCIED-QVAEANRLF-------------------------------QKM 400
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
N F P++ TYN L+ C +Y +A L +EM G+ PN
Sbjct: 401 KNERIF----------------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I+++ LID +++ A+ + M G+ PDVV YT I + +K+A L+ +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSL 634
M I PN T+ L+ + G L
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRL 530
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 178/410 (43%), Gaps = 32/410 (7%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
++ + + + A + ++ KKH PN+Y +ID G C G+ ++ +Y+++
Sbjct: 240 YILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID--GYCKTGNVRQAYGLYKEILV 297
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ N+ VF +L++ A +L ++ +M K GV ++ YN L+ C +GN +
Sbjct: 298 AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + E++ L L DVFTY+ ++ A ++ + M + + P++ T++
Sbjct: 358 AVGLLSEMESLN----LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ +EQA+ L EM +G EPN + L+ A L+ T+
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 463 K------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
T AL D + + E S PN H + +K
Sbjct: 474 GIVPDVVTYTAL---IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ I D+Y+ N+ R+ NH+ +T LI+ +G + A + MR
Sbjct: 531 SVAI-------DFYQEN---NQQRSCW---NHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
G++PD+ +Y + +K ++ KR+ L +M I PNL+ L R
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 21/342 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M G++ D+ Y +L + C G +++ E+ L +K +V+ Y+ +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG----IKPNVYIYTIYIL 242
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E M GV PN T+S++I+ G V QA L++E+L A P
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ F +A L + +L V G D N + + H +S
Sbjct: 303 NVVVFGTLVDG------FCKARELVTARSLFVHMVKFG--VDPNLYVYNCLIHGHCKS-- 352
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + S + + P TY IL+ C + +A L +M+ + P+
Sbjct: 353 --GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI N+E AL + M G+ P+++ ++T I + +K A L+ EM
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I P++VTY L+ A + ++ E L +Y DM +AG
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEA---LRLYSDMLEAG 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F V F K R+LV+A + K PN+Y+ +I G+ +++ + +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S N++ +++ + L+N + +++ M+ + A+YN L+ C N
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E + A GV + ++ T+ST++ + + + + A+ + +M G+ P+ +
Sbjct: 425 MEQALDLCSE---MTASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
T+++LI+A +++A+ L+ +ML+AG PN
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 191/433 (44%), Gaps = 27/433 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L C +E G +S L +A HLSS + Y C +I+ G G ++ +++++
Sbjct: 90 LICECCKE-GDLDRAMSLLSQMEAKGFHLSSTS-YAC--LIEALGNVGRTSEADMLFKEM 145
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ +++SL+ + L V K M LG+ +Y I L AG
Sbjct: 146 VCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRL 205
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++ + + ++ KG L+ F YS +V ++ D W+ A++V E++ G++ +T
Sbjct: 206 ---EDTWSTINEMKQKG-FPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHI 261
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+S+I+ G +++A+ LF++M + G PN N L++ + F +AF LF
Sbjct: 262 CNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFT--- 318
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ L D IS + + K I ++ S R + K Y +
Sbjct: 319 -DMQEQGLYPDPKIFVTIISCLGEQGKWDII-------KKYFESMKIRGN-KEYGAVYAV 369
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + + +++ G+ + + +L +A G E + +L+IM +G
Sbjct: 370 LVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEG 429
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ P++V I + R +A S++ +K + P++VTY TL++A R EV
Sbjct: 430 IEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVP 489
Query: 639 QCLAVYQDMWKAG 651
+Y++M G
Sbjct: 490 ---IIYKEMENDG 499
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 115/240 (47%), Gaps = 7/240 (2%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
D CN + FGK +L AL+ + +K PN+ ++I GD+MK+ ++
Sbjct: 258 DTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLF 317
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
D++ Q + + +F ++++ K+ + + +++M+ G A Y +L+
Sbjct: 318 TDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQY 377
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A E V+ L+++GVL + + + +A + + V + M + G+ PN
Sbjct: 378 GKFQNAGEC---VQALKSEGVL-VSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPN 433
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ + LINA NAG +A+ ++ + ++G P+ L++A + A +FD +++
Sbjct: 434 IVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYK 493
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEH 484
E +S C+ L+ C + DRA L + + LS T A + GN R S +
Sbjct: 81 ELSSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADM 140
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTV 542
K+ + + +KP Y+ L++ ++ EM +
Sbjct: 141 LFKEMVC-----------------YGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDL 183
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ + ++ I +D G+G +E + M++ G + Y+ + + + K+A
Sbjct: 184 GIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKA 243
Query: 603 FSLFEEMKHYQIQPNLVTYI--TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ EE++ I +L T+I +++ +YG L E L +++ M K G
Sbjct: 244 IEVLEEIRERGI--SLDTHICNSIIDTFGKYGELDEA---LKLFKKMQKEG 289
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 258 ICRTIIDVCGICGDYMKSRAIY-----EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY 312
+C +I CG S+ ++ DL S N L Y + K +E++
Sbjct: 698 LCNALIHAYAWCGSLALSKQVFNEMGCRDLVSWNSMLKSYAIHG-------QTKDAVELF 750
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-KLDVFTYSTIVK 371
Q++ V D A++ +LL AC G +++ + + GV+ +LD YS +V
Sbjct: 751 ---QRMNVCTDSATFVVLLSACSHVGFVDEGVKLFNCMS--DDHGVVPQLD--HYSCMVD 803
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG---LVEQAMHLFEEMLQ 426
++ A + +E + + P+++ WSSL+ +C G L + A F+E+ Q
Sbjct: 804 LYGGAG---KIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGKTPLAKSAADKFKELDQ 858
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 179/422 (42%), Gaps = 72/422 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G L SA++ Y K PN++I T+ID+ G + + +Y
Sbjct: 294 LLICS-CKELGH---LDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQFNEGEKLYMK 349
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+S + L++ F+ + M V A LK V + M+K DM
Sbjct: 350 LKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEK---EKDMVP------------- 393
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
D++ + +++V+ + +L +GV +
Sbjct: 394 ----------------------DIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQE 431
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LIN CA A V + LF EMLQ G +PN+ N++L +A F++A LF
Sbjct: 432 LYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELF--- 488
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + L + NT + +D +++ +T H FD F + YN
Sbjct: 489 -MMARKRGLVDVISYNTIIAAYGRKRDFKNMASTI------HTMQFD---GFSVSLEAYN 538
Query: 520 ILMKACCTDYYRVKALMNEMRTV-------GLSPNHISWTILIDACGGSGNVEGALQILK 572
C D Y + M R+V + +H ++ I+++ G G ++ +L
Sbjct: 539 -----CVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLT 593
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---ITLLRARS 629
+RE G+ PD+ +Y T IK + ++ A L +EM+ ++P+ +TY IT L+
Sbjct: 594 ELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRQNGVEPDKITYTNLITTLQKND 653
Query: 630 RY 631
+Y
Sbjct: 654 KY 655
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 165/384 (42%), Gaps = 48/384 (12%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASY 327
Y K+ + +R V LN+ N L+ +NA+ + LE + MQ+ + +Y
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLE--NWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAY 118
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA------DAKWWQM 381
NIL+ A N V AQ ++ +++ L+ D TY ++++ + +A+W+
Sbjct: 119 NILITGYGKASNMVAAQRLFSGIQN----AGLEPDDTTYRSMIEGWGRVGNYKEAEWYYK 174
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
LK G PN+ +LIN A G E A ++ML+ GC+ +S LL+
Sbjct: 175 ELK------RLGFKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSS-ILGTLLK 227
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + + D+ L + V + N+ I + + + + +
Sbjct: 228 AYEKVGRIDKIPFLLKGSFYQHVTV------NQNSCSILVIAYVKNLLVDEAIKLLGDKK 281
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN-------HISWTIL 554
++ D F Y++L+ +C + L + ++ L P HIS T +
Sbjct: 282 WN--DPVFE----DNLYHLLICSC----KELGHLDSAVKIYSLMPKSDDRPNLHISCT-M 330
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQ 613
ID G ++ ++ G+ DV+A++ I++ V++ LK A S+ E M K
Sbjct: 331 IDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKD 390
Query: 614 IQPNLVTYITLLRARSRYGSLHEV 637
+ P++ + +LR + G + ++
Sbjct: 391 MVPDIYLFRDMLRVYQQCGMMDKL 414
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y + + ++ MR + N +W +L++A G +E A Q+L M+E SP +VAY
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNI 120
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I ++ + A LF +++ ++P+ TY +++ R G+ E +
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAE 170
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ + L+ M+ SP +++ ILI G + N+ A ++ ++ G+ PD Y + I
Sbjct: 98 KAEQLLVAMQEAKFSPTIVAYNILITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMI 157
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ R K+A ++E+K +PN TL+ ++ +G E C + DM K
Sbjct: 158 EGWGRVGNYKEAEWYYKELKRLGFKPNSPNLYTLINLQAEHGD--EEGACRTL-DDMLKI 214
Query: 651 G 651
G
Sbjct: 215 G 215
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 134 GVLKKLNELGVAPLE---LFDGSGFKLLKNECQRLLDSGEVEMFVG--LMEVLEEFRLPV 188
G++ KLN+L L+ ++D + L N C R L GE+ L + +
Sbjct: 409 GMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITF 468
Query: 189 KELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDAS 247
+ + + +L ++ + R +V D++ N + +G+KRD +
Sbjct: 469 NVMLDVYAKAKLFNKARELFMMARKRGLV---DVISYNTIIAAYGRKRDFKNMASTIHTM 525
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF 307
+ S ++ ++D G G R++ + +++ + T + Y +N +MN+ +L +
Sbjct: 526 QFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYG-ELGW 584
Query: 308 TLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
EV + +L G+ D+ SYN L+KA +AG + ++ G VK + GV + D
Sbjct: 585 IDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAG---MVEDAVGLVKEMRQNGV-EPDKI 640
Query: 365 TYSTIVKV------FADAKWWQMALK 384
TY+ ++ + +A W + +K
Sbjct: 641 TYTNLITTLQKNDKYLEAVKWSLWMK 666
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/310 (18%), Positives = 114/310 (36%), Gaps = 60/310 (19%)
Query: 340 TVLAQEIYGEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPN 397
T + Q GE +++ K + LDV +S +++++ A + A V E M + P+
Sbjct: 335 TTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPD 394
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++ G++++ L+ ++L++G + + N L+ C A RLF
Sbjct: 395 IYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLF- 453
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ M + F P T T
Sbjct: 454 ----------------------NEMLQR------------------------GFDPNTIT 467
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNH------ISWTILIDACGGSGNVEGALQIL 571
+N+++ D Y L N+ R + + IS+ +I A G + + +
Sbjct: 468 FNVML-----DVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAYGRKRDFKNMASTI 522
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M+ DG S + AY + + +++ S+ + MK+ + TY ++
Sbjct: 523 HTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGEL 582
Query: 632 GSLHEVQQCL 641
G + EV L
Sbjct: 583 GWIDEVAGVL 592
>gi|399216092|emb|CCF72780.1| unnamed protein product [Babesia microti strain RI]
Length = 1520
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 169/407 (41%), Gaps = 91/407 (22%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY--VFNSLMNVNAHDLKFTLEVYKNM 315
IC+ + + C C + ++ + DL +++ + Y + ++ + +N+ D LE
Sbjct: 878 ICQVLNNTC--CINQLQQLLMMTDLLQYHMSNDFYSAILDACIRINSPD--HLLESVNKY 933
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-------------------------- 349
+K G D+ +Y +L+K + N + ++ E
Sbjct: 934 KKFGFHPDLQTYGLLIKFFSSSDNVMECFHLWNEMTSLYGYELNEVTYGCMFDALVSNNM 993
Query: 350 -------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+K ++ +K + YST++K F K AL + ML GV PNTIT++
Sbjct: 994 LDEALSLLKDMKKNSNIKPNTIIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYN 1053
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTL 461
S+I+ACA G + +A +L E+ML EP+ + +++ CV++ DR+ +L R+ +
Sbjct: 1054 SIIDACARVGDMNKAANLLEDMLNNNIEPDLITFSTVIKGYCVQS-NMDRSLQLLRAMS- 1111
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
KP YN L
Sbjct: 1112 ----------------------------------------------ERGIKPDGILYNSL 1125
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL-KIMREDG 578
+ C + + L +EM+ G++P++ + TILI G G ++ A Q++ ++ R+
Sbjct: 1126 LDGCVKSGRPWLCQQLWDEMQENGIAPSNFTLTILIKMYGRLGQLDKAFQLMDELPRKYN 1185
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ + YT + C+ + + K A +F M I P+ TY T++
Sbjct: 1186 IQTNTHVYTCLMSACITNGKYKMALDVFNCMNGNGIVPDSKTYETII 1232
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ ++ FG+ + L AL Y PN +IID C GD K+ + ED
Sbjct: 1015 IIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYNSIIDACARVGDMNKAANLLED 1074
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + N+ ++ F++++ ++ +L++ + M + G+ D YN LL C +G
Sbjct: 1075 MLNNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGR 1134
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNT 398
L Q+++ E ++ G+ + FT + ++K++ A ++ +++ + NT
Sbjct: 1135 PWLCQQLWDE---MQENGIAPSN-FTLTILIKMYGRLGQLDKAFQLMDELPRKYNIQTNT 1190
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
++ L++AC G + A+ +F M G P+S+ ++ ++
Sbjct: 1191 HVYTCLMSACITNGKYKMALDVFNCMNGNGIVPDSKTYETIIFGAIKG 1238
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D K PN I T+I G + N LNIY+
Sbjct: 1003 DMKKNSNIKPNTIIYSTLIKGFG-------------QTKQLNKALNIYL----------- 1038
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
M GV+ + +YN ++ AC G+ A + ++ ++ D+
Sbjct: 1039 ---------TMLDEGVVPNTITYNSIIDACARVGDMNKAANLLEDM----LNNNIEPDLI 1085
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T+ST++K + +L++ M G+ P+ I ++SL++ C +G L++EM
Sbjct: 1086 TFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGRPWLCQQLWDEM 1145
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ G P++ IL++ Q D+AF+L
Sbjct: 1146 QENGIAPSNFTLTILIKMYGRLGQLDKAFQL 1176
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 36/403 (8%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
R IYE+ + + FN+L+N +K LE+ M + G D+ +YN L+
Sbjct: 290 RFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G A EI + H+ ++ + + TY+T++ + A ++ + S G
Sbjct: 347 LCKLGEIDEAVEI---LHHMVSRDC-EPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V P+ T++SLI E AM LFEEM + GC+P+ +IL+++ + A
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 454 RLFRSWTLS---KTQVALGEDYDG---------NTDRISNMEHKDKQSITNTPNFVPNSH 501
L + LS + V DG D ME + T N + N
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522
Query: 502 YSS---------FDKRF--SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
S D+ KP TY ++K C D R ++ M G P+
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G V+ A ++L+ ++ GM AY I+ + KR K+A LF E
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M P+++TY + R G +Q+ + +M + G
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGG--PIQEAVDFTVEMLEKG 683
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 145/340 (42%), Gaps = 27/340 (7%)
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ V D YN+ L A L + ++ ++ + DV T++ +++
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKM----VADAVPPDVSTFNILIRALCK 211
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A + A+ + EDM + G+ P+ T+++L+ VE A+ + E M+++GCE S
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271
Query: 436 CNILLQACVEACQFDRAFR-LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N+L+ + + + A R ++ QV +G + T
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNG---------------LCRTG 316
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ F F+ TYN L+ C + +++ M + PN +++
Sbjct: 317 HIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYN 376
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKH 611
LI +VE A ++ +++ G+ PDV + + I+ +C+ S R + A LFEEMK
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR-EIAMELFEEMKE 435
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P+ TY L+ + S +++ L + ++M +G
Sbjct: 436 KGCDPDEFTYSILIESLC---SERRLKEALMLLKEMELSG 472
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+K ++ +NM G D+ +Y L+ C AG +A ++ ++ ++ KG++ L
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKL---LRSVQMKGMV-LTP 617
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFE 422
Y+ +++ K + A+++ +M+ G P+ IT+ + C G +++A+
Sbjct: 618 QAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTV 677
Query: 423 EMLQAGCEP 431
EML+ G P
Sbjct: 678 EMLEKGILP 686
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 96/232 (41%), Gaps = 45/232 (19%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSL 297
A+ ++ K+ P+ + +I+ +C + A+ +++ N+ V+N+L
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIE--SLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ + + +++ M+ LGV +YN L+ C + A ++ + +
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQL---MDQMIM 540
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G LK D FTY+T++K F + A + ++M G P+ +T+ +LI AG V+
Sbjct: 541 EG-LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVD 599
Query: 416 -----------------------------------QAMHLFEEMLQAGCEPN 432
+AM LF EM++ G P+
Sbjct: 600 VASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 32/327 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++K V AD+ Y+ ++ + C A +Y E + AKG+ +V+T+S +V
Sbjct: 138 LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSE---MIAKGIFP-NVYTFSILVDALC 193
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ + A+ + M+ GV PN +T+ ++++ V +A+++F M+Q G EPN
Sbjct: 194 KDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVW 253
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDG--NTDRIS-NMEHKDK- 487
C NI++ + + D A LF+ K V DG +IS ++E D+
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+SI T + + TYN L+ A C +++ +A L+ E++ G+
Sbjct: 314 RSIGKTVDII-------------------TYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++T LID G +E A I + + +G V Y I + +A +L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ P+ V+Y T++ A S G
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKG 441
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 61/336 (18%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D SY IL+ C G T A ++ K + DV YSTI+ K+
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQML-------RKTWVNADVVMYSTIIDSLCKGKF 162
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A ++ +M++ G+ PN T+S L++A +QAM+L M++ G +PN
Sbjct: 163 VTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGA 222
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ Q ++A +F V + E
Sbjct: 223 IMDGYCLVNQVNKALNIF--------NVMVQE---------------------------- 246
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
+P YNI++ C RV MN EM ++P+ +++ ILI
Sbjct: 247 -----------GVEPNVWCYNIIINGLCKKK-RVDEAMNLFKEMHWKKINPDVVTYNILI 294
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G + +L+++ MR G + D++ Y + + ++ L QA +L +E+K IQ
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN+ TY TL+ + G L + ++Q++ G
Sbjct: 355 PNVCTYTTLIDGLCKDGRL---EDAYVIFQEILTEG 387
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 22/288 (7%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ LE G+ K + T + ++ + + +L G PN+IT+++LI
Sbjct: 34 RQLEFNGI-KPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCL 92
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +A+ + ++ G + + IL+ + + A ++ R T V +
Sbjct: 93 NGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK-TWVNADVVM-- 149
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTD 528
Y D + + FV +++ YS + F P T++IL+ A C D
Sbjct: 150 -YSTIIDSLCKGK------------FVTDAYRLYSEMIAKGIF-PNVYTFSILVDALCKD 195
Query: 529 YYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+A L+ M G+ PN +++ ++D V AL I +M ++G+ P+V Y
Sbjct: 196 RKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCY 255
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
I + KR+ +A +LF+EM +I P++VTY L+ + G +
Sbjct: 256 NIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL ++ + PN++ C II + G+C A +++++ + + ++ +N L
Sbjct: 236 ALNIFNVMVQEGVEPNVW-CYNII-INGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ + +LE+ M+ +G D+ +YN LL A C N L Q I VK ++
Sbjct: 294 IDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALC--KNHHLDQAI-TLVKEIKD 350
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
+G+ + +V TY+T++ + A + +++L+ G T++ +IN GL +
Sbjct: 351 QGI-QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFD 409
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+A+ L M C P++ ++ A E + + +L
Sbjct: 410 EALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLL 450
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
KK+ + A+ + +P++ +ID G+C G S + +++RS T++
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILID--GLCKLGKISTSLELVDEMRSIGKTVD 321
Query: 291 IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT----VLAQ 344
I +NSL++ H L + + K ++ G+ ++ +Y L+ C G V+ Q
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
EI E H+ V+TY+ ++ + AL + M P+ +++ ++
Sbjct: 382 EILTEGYHIT--------VWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETI 433
Query: 405 INACANAGLVEQAMHLFEEMLQAG 428
I A + G + L M+ G
Sbjct: 434 IYALSEKGETVKTNKLLCAMIVRG 457
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 209/525 (39%), Gaps = 83/525 (15%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEV-EMFVGLMEVLEEFRLPVKELDE 193
+L ++ E+GV P S +L R+ D G V ++ G++ R + +
Sbjct: 230 ILSRMREVGVRP----SSSAISILFRLLLRVGDYGSVWKLLRGMI------RDGPRPCNH 279
Query: 194 EFRIVQLCV-NKPDVNLAIRYACIVPR----ADI----LFCNFVREFGKKRDLVSALRAY 244
F I+ LC K + +A ++P+ D+ + N R G+ D AL
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD---ALGFL 336
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNA 302
K+ P++ TII G+ +++R I+E ++ ++ N+ ++N+LM+ A
Sbjct: 337 HLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKA 396
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D+ +Y+ M+ G+ D A++NIL+ G + E++ + + L D
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD----WSLSSLVPD 452
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
Y V A A++ EDML G+ P+ + ++S+I A + AG + A ++
Sbjct: 453 CSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYK 512
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML G P+S C+ +L LG G ++
Sbjct: 513 IMLMFGLVPSSSTCSSML---------------------------LGLSKKGRLQEARDL 545
Query: 483 EHK--DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT----YNILMKACCTDYYRVKALM 536
+K DK N F D F T Y + + C D A +
Sbjct: 546 LYKMIDKGLPVNKVAFT-----VLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFI 600
Query: 537 N----------------EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ EM G PN+ + LI G + AL++ + MR+ G+
Sbjct: 601 DGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLL 660
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
PD+ I + R+K AF F EM H + P+ VTY TL+
Sbjct: 661 PDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLI 705
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 146/348 (41%), Gaps = 31/348 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K D+ +YNIL+ A + G T A HL K K + T+STI+ F
Sbjct: 304 MPKFCCEPDVYAYNILINAYRIRGRTSDALGFL----HLMIKNGCKPSLITFSTIITAFC 359
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A K+ E + G++PN +++L++ A V QA L+EEM G P+
Sbjct: 360 NEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGA 419
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSK---------TQVALGEDYDGNTDRISN---- 481
NIL+ + + ++ LFR W+LS VA G + G D
Sbjct: 420 TFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVA-GLCWAGQLDEAMQFLED 478
Query: 482 -MEHKDKQSITNTPNFVPNSHYSSFDKR----------FSFKPTTTTYNILMKACCTD-- 528
+E S+ + + + F+ F P+++T + ++
Sbjct: 479 MLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGR 538
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L+ +M GL N +++T+L+D G+ GA + M G+ PD +A++
Sbjct: 539 LQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSA 598
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
I ++ +++A+ F EM PN Y +L+ G LHE
Sbjct: 599 FIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHE 646
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 192/437 (43%), Gaps = 39/437 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F + ++V A + ++ ++ SPN+ + T++ D ++ +YE+
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEE 408
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF-----TLEVYKNMQKLGVMADMASYNILLKACCL 336
+R + + + FN L+ A + K+ + E++++ ++ D + Y++ + C
Sbjct: 409 MRDKGIAPDGATFNILV---AGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
AG A + ++ + KG + V +++++ ++ A + A K + ML G+ P
Sbjct: 466 AGQLDEAMQF---LEDMLEKG-MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVP 521
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ T SS++ + G +++A L +M+ G N +LL + A L+
Sbjct: 522 SSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLW 581
Query: 457 ---RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFD------ 506
+ + +A DG + E + S + FVPN+ Y+S
Sbjct: 582 YEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNC 641
Query: 507 -------------KRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHIS 550
++ P T NI++ C + R+K+ + EM +G++P+ ++
Sbjct: 642 GKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE-GRMKSAFDAFAEMHHIGVTPDTVT 700
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI ++ A + L M G PD+ Y I+ S+++ +A ++ +E+
Sbjct: 701 YNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI 760
Query: 611 HYQIQPNLVTYITLLRA 627
+ PN VTY T++ A
Sbjct: 761 AVGVVPNTVTYNTMMNA 777
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 38/245 (15%)
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
++L+ N+ + +++ + M + G P+S +IL + + + ++L R
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLR---- 267
Query: 462 SKTQVALGEDYDGNTDRISNME-------HKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
G DG N K + + FV +F +P
Sbjct: 268 -------GMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVM--------PKFCCEPD 312
Query: 515 TTTYNILMKACCTDYYRVKA-------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
YNIL+ A YR++ ++ M G P+ I+++ +I A GNV A
Sbjct: 313 VYAYNILINA-----YRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEA 367
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+I + ++E G+SP+V Y T + +++ + QA L+EEM+ I P+ T+ L+
Sbjct: 368 RKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAG 427
Query: 628 RSRYG 632
+YG
Sbjct: 428 NYKYG 432
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 123/321 (38%), Gaps = 59/321 (18%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
++NI++ C G +A+ + + K + DV+ Y+ ++ + AL
Sbjct: 280 NFNIMILCFCQKGYLRVAESLL----FVMPKFCCEPDVYAYNILINAYRIRGRTSDALGF 335
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M+ G P+ IT+S++I A N G V +A +FE + + G PN N L+ +
Sbjct: 336 LHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFK 395
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A +A L+ E +DK
Sbjct: 396 ARDVCQANMLYE-------------------------EMRDK------------------ 412
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA-----LMNEMRTVGLSPNHISWTILIDACGG 560
P T+NIL+ +Y K L + L P+ + + +
Sbjct: 413 ----GIAPDGATFNILVAG---NYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G ++ A+Q L+ M E GM P VVA+ + I R+ A ++ M + + P+ T
Sbjct: 466 AGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSST 525
Query: 621 YITLLRARSRYGSLHEVQQCL 641
++L S+ G L E + L
Sbjct: 526 CSSMLLGLSKKGRLQEARDLL 546
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP+ T++ ++ A C + V+A + ++ VGLSPN + L+ + +V A
Sbjct: 345 KPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANM 404
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ + MR+ G++PD + + + + ++ LF + + P+ Y +
Sbjct: 405 LYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLC 464
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
G L E Q L +DM + G
Sbjct: 465 WAGQLDEAMQFL---EDMLEKG 483
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 181/475 (38%), Gaps = 82/475 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC + + + L +A++ +K PN+ +C T I V + K+ E ++
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC------ 335
+ N+ +N L+ + H ++ +E+ M G D SY ++ C
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240
Query: 336 --------------LAGNTVLAQEIYGEVKHLEAKGVLK-----------LDVFTYSTIV 370
LA I+ KH A L+ +D YS IV
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ +M + G P+ +T++++IN + AG V QA + ++M + GC+
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCK 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN T+S T G GN+ M K +
Sbjct: 361 PN---------------------------TVSYTAFLKGLCQKGNSSEAREM-MKASEEQ 392
Query: 491 TNTPNFVPNS---HYSSFDKRFS-------------FKPTTTTYNILMKACCT--DYYRV 532
TPN + S H + + S F PT N+L+++ C
Sbjct: 393 WWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEA 452
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K M E +G + N +++T +I ++E AL +L M PD V YTT I
Sbjct: 453 KKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDA 512
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ R+++A L +M I P VTY T++ RYG + V+ L + M
Sbjct: 513 LGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIH---RYGQIGRVEDLLNLLDKM 564
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 128/312 (41%), Gaps = 25/312 (8%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y ++ V + K Q A +V M+ G+ + ++ + + AG + AM +
Sbjct: 82 DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--- 472
M +AG EPN CN + V A ++A R L T L + Y
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201
Query: 473 ---DGNTDRISNMEHK----DKQSITNTPNFVPNSH-----YSSFDKRFSFK--PTTTTY 518
+ + IS M K DK S F+ + +K K TY
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ C + +AL + E + G + + ++ ++D+ G ++ A +I+ M
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G PDVV YT I ++ + QA + ++M + +PN V+Y L+ + G+ E
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381
Query: 637 VQQCLAVYQDMW 648
++ + ++ W
Sbjct: 382 AREMMKASEEQW 393
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 151/341 (44%), Gaps = 48/341 (14%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M G D+ +YNIL+ C G+ A+++ V + +G + +V TY+ +V
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL---VNEMSRRGC-EPNVITYAILVNG 434
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + A V +M + G+T N++ ++ LI A V A++L EM GC+P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N L+ + + D AFRLF + L DG ++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLL-----------DG--------------AVAN 529
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTT---------------TYNILMKACCT--DYYRVKAL 535
N N+ + +R +F+ T TYN L+KA C + + L
Sbjct: 530 --NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M GL + IS I+I+ G V+ A + L+ G PD+V Y + + +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
R+K+A +LF+ ++ ++P+ TY T + + + G +++
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 152/366 (41%), Gaps = 31/366 (8%)
Query: 276 RAIY---EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
RA+Y +S ++ L I V + V + V+ +M GV + ++ I++K
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATN-------VFYDMLSKGVSPTVFTFGIVMK 226
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A C+ A + ++ + G + + Y T++ + ALK+ E+M
Sbjct: 227 ALCMFNEVDSACSL---LRDMTKHGCVP-NSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P+ T++ +I+ + A L + ML G P++ LL + + A
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
++ + L +G + + + K+ QS N F F+
Sbjct: 343 RKILIKIPCPNNAI-LNTLING---YVMSGQLKEAQSFLNETMI-----------NFGFQ 387
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYNILM C + + L+NEM G PN I++ IL++ +G +E A +
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G++ + V Y I R +++ A +L EM +P+L TY +L+ +
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507
Query: 631 YGSLHE 636
+ E
Sbjct: 508 VDRIDE 513
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 146/382 (38%), Gaps = 67/382 (17%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIY 292
RDLV+ + + PN+ +++ G+C G ++ + ++ ++ +T+N
Sbjct: 410 RDLVNEM------SRRGCEPNVITYAILVN--GLCKAGLLEEAGLVLHEMSARGLTINSV 461
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++N L+ + L + M G D+ +YN L+ C E +
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI---DEAFRLF 518
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
++ G + +V TY+T++ +Q AL + DML G T + IT++ LI A
Sbjct: 519 HNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G +E+ + L+E+M+ G ++ CNI++ + + D AF R
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR------------- 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D I+ F P TYN ++ C
Sbjct: 625 ------DAINR----------------------------GFVPDIVTYNSVLNGLC-KVG 649
Query: 531 RVKALMN---EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
R+K +N ++ G+ P+ ++ I G V A E+G P + +
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709
Query: 588 TAIKVCVRSKRLKQAFSLFEEM 609
+ ++ + F + +E+
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHI 549
N P N Y K S PT T+ I+MKA C + +L+ +M G PN I
Sbjct: 197 NCPQVATNVFYDMLSKGVS--PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ LI A V AL++L+ M G PDV + I + ++ A L + M
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
P+ +TY LL R G L+E ++ L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 535 LMNEMRTVGL-SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ +MR V L P S+ ++++ + A + M G+SP V + +K
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A SL +M + PN + Y TL+ A S+ ++V + L + ++M+ G
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK---NQVSEALKLLEEMFVMG 283
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 39/375 (10%)
Query: 289 LNIYVFNSLM-NVNAHDLKFTLE-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+Y FN+L+ + D+ + + VY + GV + ++N ++ C G A +
Sbjct: 160 FTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLV 219
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ ++ + L D FTY++++ + A +V + M+ G PN++T+S+LIN
Sbjct: 220 FNKIFQFD----LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLIN 275
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW------- 459
N G + +AM + EEM + G EP + + + + + D A L RS
Sbjct: 276 GLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSP 335
Query: 460 -TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ T + G G + M HK + VPN T TY
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKE-----GLVPN---------------TVTY 375
Query: 519 NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ CT+ + + + M G N ++ +I G ++E A+ + M +
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLK 435
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG SP VV Y T I ++ L A MK +P+ TY L+ + G L
Sbjct: 436 DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495
Query: 637 VQQCLAVYQDMWKAG 651
+ + +M K G
Sbjct: 496 AT---SFFYEMLKCG 507
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 176/432 (40%), Gaps = 33/432 (7%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + GK + SA Y P++ T+I++ G ++ ++ +
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 284 SQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + + + SL+ + + K EV+ M K G + +Y+ L+ C G
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A ++ E + KG+ + V+TY+ + D A+ + M G +P+ T+
Sbjct: 285 EAMDMLEE---MTEKGI-EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+++I+ AG +E A+ ++ +ML+ G PN+ N L+ +F A ++F W
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF-DWME 399
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSIT--------NTPNFVP---------NSHYSS 504
+A + Y+ + M+ +K + +P V Y +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459
Query: 505 FDKRFSF-------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILI 555
RF + +P TY L+ C + EM G+SPN ++T +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
D G ++ AL + + M E+G S + Y I + R +A +M +Q
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579
Query: 616 PNLVTYITLLRA 627
PN +TY +L+
Sbjct: 580 PNTITYTSLING 591
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 124/323 (38%), Gaps = 22/323 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M K G+ + +Y ++ C G +A ++ + +E G + TY+ I+
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF---ERMEENGC-SASIETYNAIIS 555
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A K M G+ PNTIT++SLIN A +F EM + C P
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ L+ + + D A RL T+ D + +S + + + +
Sbjct: 616 NAHTYTSLIYGLCQEGKVDAAERL--------TENGCEPTIDTYSTLVSGLCREGRSN-- 665
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
V N K P+ Y L+ A C AL N M G P+
Sbjct: 666 EASQLVENM------KEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF 719
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ +LI A G E AL I + + + + D++ +T + ++ M
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779
Query: 610 KHYQIQPNLVTYITLLRARSRYG 632
+ P+L TYI L R S+ G
Sbjct: 780 ESRNCTPSLHTYIILARELSKVG 802
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ +++++T++ A V + S+GV P+ +T++++IN G V++
Sbjct: 156 GLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQE 215
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ +F ++ Q P++ L+ + D+AF +F
Sbjct: 216 AVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF-------------------- 255
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA-- 534
DR+ KD P + TY+ L+ C + +A
Sbjct: 256 DRMV----KD-----------------------GCNPNSVTYSTLINGLCNEGRIGEAMD 288
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ EM G+ P ++T+ I + G V+ A+ +++ M + G SP V YT I
Sbjct: 289 MLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLF 348
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR---ARSRYG 632
R+ +++ A ++ +M + PN VTY L+ R+G
Sbjct: 349 RAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ I+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A + E+K + K+ Y+ I+ +F AL + E+M
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKI----YTMIISLFFKLDNVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H + EM + GC+P++ N ++ +A + D
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KR 508
+LF +S + NT + E K + S +S F+ K
Sbjct: 353 DGLKLFEEMGVSH---CIPNVVTYNTIIKALFESKSRVSEV----------FSWFERMKG 399
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P+ TY+IL+ C KA+M EM G P ++ LIDA G + +
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ + ++E+ S Y IK ++ RL A +LF+EM PN+ Y L+
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMS 519
Query: 627 ARSRYGSLHE 636
+R L E
Sbjct: 520 GLARACMLDE 529
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 172/407 (42%), Gaps = 47/407 (11%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R + K++ P I II + + + +++E++R +++ + L+
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELI 307
Query: 299 NV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A + Y MQ+ G D N ++ AG + +K E
Sbjct: 308 RGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAG------RLDDGLKLFEEM 361
Query: 357 GVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLIN 406
GV +V TY+TI+K ++K W+ E M +G++P+ T+S LI+
Sbjct: 362 GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF-------ERMKGSGISPSPFTYSILID 414
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+E+AM L EEM + G P L+ A +A ++D A LF+
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE-------- 466
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILM-- 522
L E+ ++ R+ + K + + + FD+ + P YN LM
Sbjct: 467 -LKENCGSSSARVYAVMIKHLGKAGRLDDAI-----NLFDEMSKLGCTPNVYAYNALMSG 520
Query: 523 --KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+AC D M +M+ G P+ S+ I+++ +G A+++L M+ +
Sbjct: 521 LARACMLD--EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIK 578
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
PD V+Y T + + ++A L +EM + +L+TY ++L A
Sbjct: 579 PDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
+PT YN I+M Y +V L NEM G P+ ++++ LI A G + A+
Sbjct: 191 QPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAI 250
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++L M+E+GM P YT I + + + A SLFEEM++ +P++ TY L+R
Sbjct: 251 RLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGL 310
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G + E Y +M + G
Sbjct: 311 GKAGRIDEAYH---FYHEMQREG 330
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ+ G + D+ SYNI+L
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ +K+ +K D +Y+T++ + A ++ A ++ ++M + G
Sbjct: 558 KTGGPHRAMEMLTNMKN----STIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 614 YDLITYSSILEA 625
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 158/392 (40%), Gaps = 31/392 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNM 315
+ R ++ G G ++ + ++RS + L + N ++ V F +V+ M
Sbjct: 113 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 172
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ GV D S+ L+ CC G +E+ + + G LD T + +V+ +
Sbjct: 173 TRAGVCPDERSFRALVVVCCREGKV---EEVDALLAAMWRYG-FSLDNATCTVVVRSLCE 228
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
++ + ML G PN + +++ I+ V+QA H+ EEM+ G +PN
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQS 489
L+ + +RAFRLF S + Y N + M E K ++
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSS-------YKPNVHTYTVMIGGYCREGKLARA 341
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
V KP T TY L+ C + R LMN+M+ G PN
Sbjct: 342 EMLLVRMVEQ----------GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 391
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ +ID G ++ A ++L++ G+ D + YT I + + A LF+
Sbjct: 392 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 451
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
M P++ Y +L+ + + E Q+
Sbjct: 452 RMVENGCCPDIEAYTSLISTYCQQRQMEESQK 483
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 15/286 (5%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L L V T + +++V + + A KV + M AGV P+ ++ +L+ C G VE+
Sbjct: 142 LPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVD 201
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L M + G ++ C +++++ E +F FR + T + +Y D
Sbjct: 202 ALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV-VNYTAWIDG 260
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--- 535
+ + KQ+ V KP T+ L+ C + +A
Sbjct: 261 LCKRRYV-KQAFHVLEEMVGRG----------LKPNVYTHTTLIDGLCKIGWTERAFRLF 309
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +++ PN ++T++I G + A +L M E G+ P+ YTT I +
Sbjct: 310 LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCK 369
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+AF L +MK PN+ TY ++ + G + E + L
Sbjct: 370 GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 415
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 135/324 (41%), Gaps = 21/324 (6%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
+K V + M G+ ++ ++ L+ C G T A ++ +K +++ K +V
Sbjct: 267 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLF--LKLIKSSS-YKPNVH 323
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+ ++ + A + M+ G+ PNT T+++LI G ++A L +M
Sbjct: 324 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
Q G PN N ++ + + A+++ R T + G +D T I EH
Sbjct: 384 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT------SQGLKFDKITYTILITEH 437
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFK--PTTTTYNILMKACCTDYY--RVKALMNEMR 540
+ IT + FD+ P Y L+ C + ++
Sbjct: 438 CKQGHITYALDL--------FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCL 489
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+GL P ++T +I G AL++ + M ++G D + Y I + RL+
Sbjct: 490 MIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLE 549
Query: 601 QAFSLFEEMKHYQIQPNLVTYITL 624
+A +L+E M ++ P VT +TL
Sbjct: 550 EAKALYEGMLDKRLVPCEVTRVTL 573
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 21/258 (8%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
PN T+I G C G + ++ + ++ + NIY +N++++ K E
Sbjct: 355 PNTNTYTTLIG--GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ-EA 411
Query: 312 YKNMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
YK ++ G+ D +Y IL+ C G+ A +++ + G D+ Y++
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF---DRMVENGCCP-DIEAYTS 467
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + + K + L G+ P T++S+I G A+ +FE M+Q G
Sbjct: 468 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY---DGNTDRI 479
C +S L+ + + + A L+ + T+V L +Y + + +
Sbjct: 528 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAV 587
Query: 480 SNMEHKDKQSITNTPNFV 497
S ++ DK+ +T + V
Sbjct: 588 SVLDRLDKRQQVHTVDVV 605
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 153/366 (41%), Gaps = 61/366 (16%)
Query: 270 GDYMKSRAIYEDLRSQN------VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVM 321
G ++ +++ LRS N ++Y + + ++ ++ D+ LE+ + M+ +
Sbjct: 117 GKDRRAMELFDWLRSANERSPLRALCDVYSYTATISLCIHGQDVDRALELMQEMRSRNIE 176
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y L+ C G LA +IY ++ + +V TY+T+V V+ W+
Sbjct: 177 RNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMP----NVVTYNTLVDVYGKLGQWER 232
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ V + M GV P T+++LI AC +A+ +++ +L G PNS N L+
Sbjct: 233 AIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALIS 292
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A + Q +A +++ E N DR
Sbjct: 293 AYGKTTQLGKALEVYQ------------EMLRQNMDR----------------------- 317
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ TY+ L+ AC + + NEM+ PN +++ L+ AC
Sbjct: 318 ------------SVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACA 365
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G E A ++ + M G +PDVV YT I R + ++A F +M +P+ +
Sbjct: 366 QGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAI 425
Query: 620 TYITLL 625
Y ++
Sbjct: 426 VYNAII 431
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 39/299 (13%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV++Y+ + + + AL++ ++M S + N T+++L+N C G + A+ ++
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIY 202
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
M C PN N L+ + Q++RA + +
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHV-----------------------LDV 239
Query: 482 MEHKDKQSITNTPNFV---------PNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYY 530
M+H+ + + T N + P + + + S F P +TTYN L+ A
Sbjct: 240 MKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQ 299
Query: 531 RVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL EM + + I+++ LI AC +G E AL+I M++D P+ V Y +
Sbjct: 300 LGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNS 359
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ C + + ++A +FE+M + P++VTY L+ A R G + Q+ L + M
Sbjct: 360 LVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGG---QWQKALQAFHKM 415
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 12/239 (5%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A I C ++ + +L+ +R+ + + N++ +++VC CG + IY
Sbjct: 149 ATISLCIHGQDVDRALELMQEMRSRNIER------NVHTYTALMNVCIKCGKLPLALDIY 202
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R+ N N+ +N+L++V + + V M+ GV + +YN L+ AC +
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMC 262
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A +Y + L + G + TY+ ++ + AL+V ++ML + +
Sbjct: 263 NQPREALAVY---QRLLSDG-FTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRS 318
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
IT+SSLI+AC AG E A+ +F EM Q C PN+ N L+ AC + Q+++A +F
Sbjct: 319 VITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVF 377
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 23/316 (7%)
Query: 155 FKLLKNECQRL-LDSGEVEMFVGLMEVLEEFRLPVKELDEEFR---IVQLCVNKPDVNLA 210
F+ L ++ RL D +E+F L E R P++ L + + + LC++ DV+ A
Sbjct: 106 FRALHHDLSRLGKDRRAMELFDWLRSANE--RSPLRALCDVYSYTATISLCIHGQDVDRA 163
Query: 211 IRYACIVPRADI--------LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTI 262
+ + +I N + GK L AL Y++ + PN+ T+
Sbjct: 164 LELMQEMRSRNIERNVHTYTALMNVCIKCGK---LPLALDIYNSMRAVNCMPNVVTYNTL 220
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
+DV G G + ++ + + ++ + V + +N+L+ + + L VY+ + G
Sbjct: 221 VDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGF 280
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +YN L+ A A E+Y E+ + + V TYS+++ A W+
Sbjct: 281 TPNSTTYNALISAYGKTTQLGKALEVYQEM----LRQNMDRSVITYSSLISACEKAGQWE 336
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL++ +M PNT+T++SL+ ACA G E+A +FE+M GC P+ L+
Sbjct: 337 TALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALI 396
Query: 441 QACVEACQFDRAFRLF 456
A Q+ +A + F
Sbjct: 397 SAYERGGQWQKALQAF 412
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + V +GK A+ D K P + T+I C +C ++ A+Y+
Sbjct: 215 VTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQR 274
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L S T N +N+L++ L LEVY+ M + + + +Y+ L+ AC AG
Sbjct: 275 LLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQ 334
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A I+ E++ + K V + TY+++V A W+ A +V E M + G TP+ +
Sbjct: 335 WETALRIFNEMQ--QDKCVP--NTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVV 390
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
T+++LI+A G ++A+ F +M GC+P++ N ++ E
Sbjct: 391 TYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLWE 436
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
CN RE AL Y +PN +I G K+ +Y+++
Sbjct: 261 MCNQPRE---------ALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEML 311
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
QN+ ++ ++SL++ A + L ++ MQ+ + + +YN L+ AC G
Sbjct: 312 RQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWE 371
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E++ + + A G DV TY+ ++ + WQ AL+ M G P+ I +
Sbjct: 372 KAAEVF---EQMNAHGCTP-DVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVY 427
Query: 402 SSLINACANAGLV---EQAMHLFEEMLQAG 428
+++I+ G++ +A+ LF +Q G
Sbjct: 428 NAIIDTLWETGIIWAQGKALQLFMTAVQQG 457
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 182/437 (41%), Gaps = 68/437 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D ++ + + K +D A + K+ P + I+D G+C G + +
Sbjct: 45 DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD--GLCKAGRTKDAVKL 102
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+++R + + NIY +N ++ + K E K ++++ G D+ +YN +K C
Sbjct: 103 LDEMRDKGCSPNIYTYNVIVEGLCEERKLD-EAKKMLEEMAVRGYFPDVVTYNSFIKGLC 161
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E + A+ + DV +Y+T++ + A ++ + M + G T
Sbjct: 162 KCDRV-------DEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+SSLI+ G VE+AM L + ML+ GC PN N LL A L
Sbjct: 215 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA------------L 262
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R + K + D + ME R F P
Sbjct: 263 HRLGHIGKAE-----------DMLVEME------------------------RRGFTPDV 287
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+YN + C + KA+ + M G +PN S+++L++ ++ A+ +++
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYG 632
RE D++ YT + + R +A +LF ++ +I +P++ Y +L + +
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR- 406
Query: 633 SLHEVQQCLAVYQDMWK 649
++ + L +++ M +
Sbjct: 407 --RQIDKALQIHKQMLE 421
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 32/350 (9%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D ++ ILL+ C + A+++ G +K + G + D Y+ ++ ++ AK + A
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEM---GCVPDDAI-YNALISGYSKAKDFGQA 64
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K +M+ P +T++++++ AG + A+ L +EM GC PN N++++
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 443 CVEACQFDRAFRLFRSWTLS---KTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
E + D A ++ + V G DR+ K + TP+ V
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDE-ARKFLARMPVTPDVV 183
Query: 498 P-----NSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEM 539
N S D + + P TY+ L+ C + R L++ M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+G PN +++ L+ A G++ A +L M G +PDVV+Y I +++R+
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE----VQQCLAVYQ 645
K+A ++F+ M PN +Y L+ + L + V+Q YQ
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ 353
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 182/445 (40%), Gaps = 45/445 (10%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
+ + N V K A++ D + SPN+Y I++ G+C + +++ +
Sbjct: 81 VTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE--GLCEERKLDEAKKML 138
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E++ + ++ +NS + E K + ++ V D+ SY ++ C +G+
Sbjct: 139 EEMAVRGYFPDVVTYNSFIK-GLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD 197
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + ++ + +G DV TYS+++ F + A+ + + ML G PN +
Sbjct: 198 LDSASRMLDQMTN---RGCTP-DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--- 456
++SL+ A G + +A + EM + G P+ N + +A + +A +F
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313
Query: 457 ---------RSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNT-------PNFVPN 499
S+++ ++ ++ D D I+ +E ++K I +
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELD---DAITLVEQAREKYQIVDILLYTVLLDGLCKG 370
Query: 500 SHYSSFDKRFS-------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP-NHISW 551
+ FS +P YN+++ + C KAL + + + N ++W
Sbjct: 371 GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTW 430
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
IL+ + A +L M ++G PD V Y T + + + A LFEE
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Query: 612 YQIQPNLVTYITLLRARSRYGSLHE 636
P++VTY L+ G +HE
Sbjct: 491 GGCVPDVVTYSALIT-----GLVHE 510
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 135/340 (39%), Gaps = 57/340 (16%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K++A+++ + + T N ++ L+ +L + + + ++ + D+ Y +LL
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML- 390
C G A ++ +V L+ K + + DVF Y+ ++ + AL++ + ML
Sbjct: 365 DGLCKGGRFDEACALFSKV--LDEK-ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421
Query: 391 ---------------------------------SAGVTPNTITWSSLINACANAGLVEQA 417
G P+ +T+ +L++A G A
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 481
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK-TQVALGEDYDGNT 476
+ LFEE ++ GC P+ + L+ V + A+ LF ++ + LG +G+
Sbjct: 482 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSG 541
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
D + + +S + PN+ +F K S K L+KA + + L
Sbjct: 542 DLGLKLFVELIES-----DVEPNAR--TFGKEISGK--------LVKA--ESLGKARGLF 584
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ G P+ LID G++E A +I M++
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ IL+ S +E A Q+L M+E G PD Y I ++K QAF
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
EM P +VTY ++ + G + + L +D
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRD 108
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/241 (17%), Positives = 108/241 (44%), Gaps = 40/241 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
V E KK++L A+ + +++ ++ + ++D G+C G + ++ A++ +
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLD--GLCKGGRFDEACALFSKVLD 385
Query: 285 QNVT-LNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +++ +N +++ + + L+++K M + ++ ++NIL+ C+
Sbjct: 386 EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLS 444
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + + + +G + D TY T+V AL++ E+ + G P+ +T+
Sbjct: 445 DAETM---LLTMVDEGFIP-DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 500
Query: 402 SSLINACANAGLVEQA----------------------------MHLFEEMLQAGCEPNS 433
S+LI + + E+A + LF E++++ EPN+
Sbjct: 501 SALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560
Query: 434 Q 434
+
Sbjct: 561 R 561
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 22/323 (6%)
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N+ L A C +G+ A+ + + L + DV TY+T++ A V
Sbjct: 14 NVCLAALCRSGSLERAESVLIDAILLG----MPPDVVTYNTLLAAHCRAAGLDAGFAVLR 69
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M AGV PN +T++SLI A + GL +A+ LF+EML+AG P++ N+L+ +
Sbjct: 70 RMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSG 129
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ A+R+F K Y+ D + H TN + +
Sbjct: 130 HPEDAYRVFADMA-EKGVTPCTTTYNTLLDGLFKAGHA-----TNAYRMF------RYLQ 177
Query: 508 RFSFKPTTTTYNILMKACC----TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
R TYN ++ C Y R+ ++ E+ +PN +++T ++ C G
Sbjct: 178 RVGLPVGIVTYNTMINGLCRSGKVGYARM--ILRELGRTEHTPNAVTYTTVMKCCFRYGR 235
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ L+ + E G PDV Y T I V+ R+++A + E M + + Y T
Sbjct: 236 FDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNT 295
Query: 624 LLRARSRYGSLHEVQQCLAVYQD 646
L+ R + G L + + L++ ++
Sbjct: 296 LIHLRCQEGKLDDAFELLSMMEE 318
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 26/372 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT---LEVYKNMQKLGVMADMASYNILLKA 333
A+ +R V N +NSL+ V A + T L+++ M + G+ D SYN+L+
Sbjct: 66 AVLRRMREAGVWPNAVTYNSLI-VAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHC 124
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+G+ A ++ ++ KGV TY+T++ A A ++ + G
Sbjct: 125 LFRSGHPEDAYRVFADMAE---KGVTPCTT-TYNTLLDGLFKAGHATNAYRMFRYLQRVG 180
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ +T++++IN +G V A + E+ + PN+ +++ C +FD+
Sbjct: 181 LPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGL 240
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
F LS + D IS + K + N YS + +
Sbjct: 241 ETF----LSLLEGGHIPDVFPYCTVISALVKKGRVEEANA--------YSELMIQSGSRL 288
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T YN L+ C + A L++ M GL + +++IL++ G++E A + L
Sbjct: 289 DTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQL 348
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M M +VVAY + +S ++ A L +MK + TY +L+ R
Sbjct: 349 CYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDMK----LKDDFTYTSLVHGLCRV 404
Query: 632 GSLHEVQQCLAV 643
G H + L +
Sbjct: 405 GRYHMASKFLRI 416
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 148/334 (44%), Gaps = 21/334 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
E+ +++K+G+ ++ Y L+ CC G+ A+ ++ ++ + L + +TY+
Sbjct: 172 FELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVN----LVANQYTYTV 227
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ++ E M GV PN T++ +IN N G + +A LF+EM + G
Sbjct: 228 LINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRG 287
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
N N L+ + A +L + + + G ++ TD + ME +
Sbjct: 288 VVSNVVTYNTLISGLCRKTRIWEAEKLVDQ--MKRAGYSNGGNWVDVTDLVREMEERGIS 345
Query: 489 SITNTPNFVPNSH------------YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKA 534
T + N+H YSS +K P Y +L+ C +
Sbjct: 346 PSKVTYTILTNAHVRLGDMEKAFHFYSSMEK-VGLVPDVHIYGVLLHGLCVKGNMKEASK 404
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L M + L PN + + +I+ +GN AL+ LK M + + P+V +Y++ I +
Sbjct: 405 LFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILC 464
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ + ++A L +M+ ++P++ Y + +A+
Sbjct: 465 KDGKWQEAEILLNKMRGSGLEPSVSIYNIISKAK 498
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E KG ++LDV+TY ++K +A + ++ D+ G++PN + +++LI+ C G
Sbjct: 143 EVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGD 202
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V +A LF +M + N +L+ + F LF L L Y+
Sbjct: 203 VRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNL-YTYN 261
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACC----- 526
+ N E K ++ Y FD+ + TYN L+ C
Sbjct: 262 CMINEFCN-EGKLHKA------------YELFDEMCKRGVVSNVVTYNTLISGLCRKTRI 308
Query: 527 ------------------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
++ V L+ EM G+SP+ +++TIL +A G++E A
Sbjct: 309 WEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAF 368
Query: 569 QILKIMREDGMSPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M + G+ PDV Y + +CV+ +K+A LF M +++PN V Y T++
Sbjct: 369 HFYSSMEKVGLVPDVHIYGVLLHGLCVKG-NMKEASKLFRSMAEMKLEPNEVVYNTMING 427
Query: 628 RSRYGSLHEVQQCLAVYQD 646
+ G+ + L +D
Sbjct: 428 YCKAGNSFRALRFLKEMED 446
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 136/364 (37%), Gaps = 76/364 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD +++ ++ + N+ N Y + L+N K E
Sbjct: 184 SPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFE 243
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ MQ GV ++ +YN ++ C G A E++ E + +GV+ +V TY+T++
Sbjct: 244 LFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDE---MCKRGVVS-NVVTYNTLI 299
Query: 371 K---------------------VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+++ W + +M G++P+ +T++ L NA
Sbjct: 300 SGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHV 359
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G +E+A H + M + G P+ +LL A +LFRS K +
Sbjct: 360 RLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLE---- 415
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
P YN ++ C
Sbjct: 416 -------------------------------------------PNEVVYNTMINGYCKAG 432
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ +R + EM L PN S++ I G + A +L MR G+ P V Y
Sbjct: 433 NSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYN 492
Query: 588 TAIK 591
K
Sbjct: 493 IISK 496
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 118/294 (40%), Gaps = 53/294 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K+ Y +I+ V+ + ++A+ M+ G+ +++L+++ + E+
Sbjct: 80 KISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWF 139
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+F E ++ E + I+++ C EA F + F L +
Sbjct: 140 VFNE-VKGKIELDVYTYGIMIKGCCEAGVFYKGFEL-----------------------L 175
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMN 537
+++E + P Y L+ CC D R K L N
Sbjct: 176 TDLE------------------------KMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFN 211
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M V L N ++T+LI+ G + ++ + M+ DG+ P++ Y I
Sbjct: 212 KMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEG 271
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L +A+ LF+EM + N+VTY TL+ R + E ++ + M +AG
Sbjct: 272 KLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLV---DQMKRAG 322
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 166/393 (42%), Gaps = 26/393 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
II + G K+ AI+ ++ + +NS++ + H+ ++ E+Y M G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 320 -VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
D +Y+ L+ A C G A + E+K + K+ Y+ ++ +F
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKI----YTMLIALFFKLNN 276
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + E+M P+ T++ LI AG ++A + F EM + GC P++ N
Sbjct: 277 VHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINN 336
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++ +A + D A +LF T + NT + E K + S
Sbjct: 337 MINFLGKAGRLDDAVKLFEEMG---TLQCIPSVVTYNTIIKALFESKSRIS--------- 384
Query: 499 NSHYSSFDKRF---SFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTI 553
SS+ +R P+ TY+IL+ C KA+M EM G P ++
Sbjct: 385 --EISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LIDA G + + A ++ + ++E+ S Y IK ++ RL A +LF+EM
Sbjct: 443 LIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLG 502
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
PN+ Y L+ +R G L E + Q+
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQE 535
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 43/405 (10%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R + K + P I +I + + + ++E++R Q +++ + L+
Sbjct: 244 SAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELI 303
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+F + M++ G D N ++ AG A VK E
Sbjct: 304 RGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA------VKLFEEM 357
Query: 357 GVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLIN 406
G L+ V TY+TI+K ++K W+ E M +G++P+ T+S LI+
Sbjct: 358 GTLQCIPSVVTYNTIIKALFESKSRISEISSWF-------ERMKGSGISPSPFTYSILID 410
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
E+AM L EEM + G P L+ A +A ++D A LF+
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQE-------- 462
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKA 524
L E+ ++ R+ + K + V + FD+ + P YN LM
Sbjct: 463 -LKENCGSSSARVYAVMIKHLGKAGRLDDAV-----NLFDEMNKLGCTPNVYAYNALMSG 516
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+AL M M+ G P+ S+ I+++ +G A+++L M++ + PD
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
V+Y T + + ++A L +EM + +L+TY ++L A
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 196/487 (40%), Gaps = 51/487 (10%)
Query: 188 VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDAS 247
V++ E ++++Q V P C+V ++ + +R G + + A+ +
Sbjct: 132 VEQYGEMWKMIQEMVRNP--------VCVVTPMEL--SDIIRMLGNAKMISKAVAIFYQI 181
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN------VTLNIYVFNSLMNVN 301
K P ++I + G Y K +Y ++ ++ VT + + ++ +
Sbjct: 182 KVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALI-SAFCKLG 240
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
D + + M+ G+ Y +L+ N A ++ E++H +
Sbjct: 241 RQD--SAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRP---- 294
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DVFTY+ +++ A + A +M G P+T+ +++IN AG ++ A+ LF
Sbjct: 295 DVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLF 354
Query: 422 EEMLQAGCEPNSQCCNILLQACVEA----CQFDRAFRLFRSWTLSKTQVALGEDYDG--N 475
EEM C P+ N +++A E+ + F + +S + DG
Sbjct: 355 EEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCK 414
Query: 476 TDRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
T+R +E D++ P S + K + + L + C + R
Sbjct: 415 TNRTEKAMMLLEEMDEKGFPPCPA-AYCSLIDALGKAKRYDIAHELFQELKENCGSSSAR 473
Query: 532 VKALM-----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
V A+M +EM +G +PN ++ L+ +G ++ AL ++ M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+E G PD+ +Y + ++ +A + MK I+P+ V+Y T+L A S G
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLF 593
Query: 635 HEVQQCL 641
E + +
Sbjct: 594 EEAAKLM 600
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + A + K++ S + + +I G G +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVN 493
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ T N+Y +N+LM+ A L L + MQ+ G + D+ SYNI+L
Sbjct: 494 LFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLA 553
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ +K + +K D +Y+T++ + A ++ A K+ ++M G
Sbjct: 554 KTGGPHRAMEMLSNMK----QSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFE 609
Query: 396 PNTITWSSLINA 407
+ IT+SS++ A
Sbjct: 610 YDLITYSSILEA 621
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 153/368 (41%), Gaps = 35/368 (9%)
Query: 290 NIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ FNSL++ A +L+ E++ +M++ V D+ +Y ILL C AG L +
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAG---LVGDAL 186
Query: 348 GEVKHLEAKGV-LKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSA-GVTPNTITWSSL 404
+ + + G + D+ +T+V Q A+ V E M G PNT+T++ L
Sbjct: 187 KVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCL 246
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR----SWT 460
+AC G ++ A + E M + G PN N ++ + A FR +W
Sbjct: 247 ADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWL 306
Query: 461 LSK----------------TQVALG-----EDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ VAL E D + M +T V
Sbjct: 307 EARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDA 366
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ ++ K+ FK YNIL+ C + L EM+ GL P+ ++ L+
Sbjct: 367 CNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSC 426
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G+ ++L M +DG P VV + T + ++ + +A +F M +IQPN
Sbjct: 427 LCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPN 486
Query: 618 LVTYITLL 625
V Y TL+
Sbjct: 487 TVIYNTLI 494
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 69/402 (17%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIID----VCGICG-DYMKSRAIYEDLRSQNV---TLNI 291
AL+ D +SSP +C I+ V G+C ++ ++ D R + V N
Sbjct: 185 ALKVLD----RMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNT 240
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N L + D+ ++ + M+K GV ++ + N ++ C G A + + E
Sbjct: 241 VTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFRE 300
Query: 350 VKH--LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ LEA+G + TYST+V F +A+++ +M G P+ + + ++I+
Sbjct: 301 KRTTWLEARG----NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
AG + A ++ M +AG + + + NIL+ + A +LF
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEM-------- 408
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
K +P TYN L+ C
Sbjct: 409 ---------------------------------------KGAGLQPDVYTYNTLLSCLCK 429
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D+ V L+ M G P+ +++ L+ +G + AL+I + M E + P+ V
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVI 489
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y T I +S+ + A LF+EM+ + N+ TY LL+
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKG 531
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVM 321
++D C I MK D ++ N+ + + ++ AH L ++ M+ G+
Sbjct: 363 LVDACNIAAS-MKKAGFKLDRKAYNILIGGFCRKKRLH-EAHQL------FEEMKGAGLQ 414
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +YN LL C AG+ E+ G + + V T+ T+V + A
Sbjct: 415 PDVYTYNTLLSCLCKAGDFSAVDELLGNM----IDDGCQPSVVTFGTLVHGYCKAGKTDE 470
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
ALK+ M A + PNT+ +++LI+ + V+ A+ LF+EM + N N LL+
Sbjct: 471 ALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLK 530
Query: 442 ACVEACQFDRAFRLF 456
+ ++AF L
Sbjct: 531 GLQDKNMPEKAFELM 545
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 113/304 (37%), Gaps = 56/304 (18%)
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A G DV T+++++ A + ++ M A V P+ +T+ L+N AGLV
Sbjct: 123 AAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLV 182
Query: 415 EQAMHLFEEMLQAGCEPNSQCCN--ILLQACVEA-CQFDRAFRLFRSWTLSKTQVALGED 471
A+ + + M P S C ++L V+ C+ R
Sbjct: 183 GDALKVLDRM----SSPGSDVCADIVILNTVVDGLCKIGRL------------------- 219
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDY 529
D I ++ + +Q PN T TYN L ACC D
Sbjct: 220 ----QDAIVFVDERMRQVHGCAPN-------------------TVTYNCLADACCRVGDI 256
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP--DVVAYT 587
++ M G++PN I+ ++ G V AL + R + + V Y+
Sbjct: 257 DMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYS 316
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + + + A LF EM P+ V Y T++ ++ G L V C + M
Sbjct: 317 TLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRL--VDAC-NIAASM 373
Query: 648 WKAG 651
KAG
Sbjct: 374 KKAG 377
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++E+++ + ++Y +N+L++ A D E+ NM G + ++ L+
Sbjct: 400 EAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLV 459
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C AG T A +I+ + EA+ ++ + Y+T++ ++ +A+K+ ++M
Sbjct: 460 HGYCKAGKTDEALKIFRSMG--EAR--IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRE 515
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V N T+++L+ + + E+A L ++M + C P+ ++L++ E + +R
Sbjct: 516 NNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETER 575
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 6/204 (2%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ F +K+ L A + ++ K P++Y T++ GD+ + ++
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ F +L++ A L+++++M + + + YN L+ C + +A
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E++ + + +V TY+ ++K D + A ++ + M TP+ +T L
Sbjct: 508 KLFDEMR----ENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVL 563
Query: 405 INACANAGLVEQAMHLFEEMLQAG 428
+ G E+ E+ + G
Sbjct: 564 MEWLPEIGETERLKCFMEQRDEKG 587
>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13800
gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 883
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 128/577 (22%), Positives = 230/577 (39%), Gaps = 90/577 (15%)
Query: 120 IVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
I + I GR D VVG ++ LG+ D + L+ R D E+E + +
Sbjct: 189 ISRMIASGRSDMVVGFFWEIERLGLDA----DAHTYVLVVQALWRNDDKEELEKLLSRL- 243
Query: 180 VLEEFRLP-VKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKK---- 234
++ E R P V L+ I LC+N+ I Y + P D + G
Sbjct: 244 LISETRNPCVFYLN---FIEGLCLNQ---MTDIAYFLLQPLRDANILVDKSDLGIAYRKV 297
Query: 235 -RDLVSALRAYDAS------KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
R L +R DA +KH P++Y+ II+ + K+ ++ + +
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 288 TLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+N + +S++ F+ +++K ++ + D YN+ A G A E
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ E + KG+ DV Y+T++ A + +M G TP+ + ++ L
Sbjct: 418 LFRE---MTGKGIAP-DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
A GL ++A + M G +P N++++ ++A + D+A + S
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES------- 526
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN-------SHYSSFDKRFSFKPTTTTY 518
+EHK ++ N + V H R F + Y
Sbjct: 527 ----------------LEHKSRE---NDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 519 NILMKACCT--DYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
L + C DY + + L++ M +G+ P + LI A NV A + +I+
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR------- 628
+ PD+ YT I R KQA++LFE+MK ++P++VTY LL +
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKR 687
Query: 629 ------------------SRYGSLHEVQQCLAVYQDM 647
+RY L+++++ A+++DM
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 180/424 (42%), Gaps = 46/424 (10%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K ++ A+ ++ K N I +I+ G++ ++ ++++ R N++L+
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N + ++ +E+++ M G+ D+ +Y L+ CCL G A ++
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL---- 453
Query: 351 KHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+E G K D+ Y+ + A Q A + + M + GV P +T + +I
Sbjct: 454 -MIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI 512
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC---QFDRAFRL----------- 455
+AG +++A +E + E ++ +++ C C F+R RL
Sbjct: 513 DAGELDKAEAFYESLEHKSRENDA---SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT 569
Query: 456 -FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN--------TPNFVPNSHYSSFD 506
F S K ++ +D DR+ + + ++S+ N +
Sbjct: 570 LFTSLCAEKDYISKAQDL---LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 507 KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
P TY I++ C + + AL +M+ + P+ +++++L+ N
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NS 679
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ L + + M + PDVV YT I LK+ ++LF++MK +I P++VTY L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 625 LRAR 628
L+ +
Sbjct: 740 LKNK 743
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 32/310 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M KLGV + + Y L+ A C N A+E + + L K ++ D+FTY+ +
Sbjct: 586 DLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF---EILVTKKIVP-DLFTYTIM 641
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + + A + EDM V P+ +T+S L+N+ + + + EM
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDV 694
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ I++ + + LF+ + + ++ D +
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKD--MKRREIV-----------------PDVVT 735
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
T P + S K F KP Y +L+ C D K + ++M G+ P+
Sbjct: 736 YTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+T LI C G ++ A I M E G+ PDVV YT I C R+ + +A L +
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
Query: 608 EMKHYQIQPN 617
EM I+P
Sbjct: 856 EMLEKGIKPT 865
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D K A+++D++ + + ++ + L+ N + + E M+ V D+ Y +L
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLK-NKPERNLSRE----MKAFDVKPDVFYYTVL 767
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G+ A+ I+ ++ + + D Y+ ++ + + A + + M+
Sbjct: 768 IDWQCKIGDLGEAKRIFDQM----IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+GV P+ + +++LI C G V +A+ L +EML+ G +P
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 177/407 (43%), Gaps = 53/407 (13%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD--YMKSRAIYEDLRSQNVTLNIY 292
RDL++ L +Y +S + + G+C + ++ ++ +N N
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTL--------LKGLCASKRWDDVEELFAEMMEKNCMPNEV 283
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
F+ L+ ++ ++V + M + + NI++ + C G + + +
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRV---DDAFKFL 340
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
++ + G D +Y+T++K A+ W A ++ ++M+ PN +T+++ I
Sbjct: 341 NNMGSYGC-NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ 399
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSW-----TLSKT 464
GL+EQA+ L E+M + GC N L+ CV+ D A LFRS T++ T
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG-HIDSALELFRSMPCKPNTITYT 458
Query: 465 QVALG----EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ G E D + ++ M H+D P T+N+
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLHRD------------------------CPPNVVTFNV 494
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C + +A L+ +M G +PN I++ L D + E AL++L + G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SPDV+ +++ I + + R+++A +F + ++P + Y +L
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 50/356 (14%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + + G D+ +YN L+ C G+ A+ + G + + D +TY+ ++
Sbjct: 97 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-------VAPDAYTYTPLI 149
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+V D AL + +DML G PN +T++ L+ A C N+G EQAM + +EM GC
Sbjct: 150 RVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF-EQAMAVLDEMRAKGC 208
Query: 430 EPNSQCCNILLQACVEACQFDRAF----RLF----RSWTLSKTQVALG----EDYDGNTD 477
PN N+++ + D A RLF + T+S T + G + +D +
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEE 268
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKAL 535
+ M K N +PN T+++L++ C R +
Sbjct: 269 LFAEMMEK---------NCMPNE---------------VTFDMLIRFFCRGGMVERAIQV 304
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +M + N I+I++ G V+ A + L M G +PD ++YTT +K R
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++R A L +EM PN VT+ T + + G ++Q + + + M + G
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL---IEQAIMLIEQMQEHG 417
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 196/491 (39%), Gaps = 93/491 (18%)
Query: 196 RIVQLCVNK----PDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
R+V+L ++ PDV L + L N R G+ D LRA + S
Sbjct: 60 RLVELSASRDGEAPDVYLCTK----------LIRNLCRR-GRTSDAARVLRAAEGSG--- 105
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S +++ T+ V G C Y A + S V + Y + L+ V + + L
Sbjct: 106 SPVDVFAYNTL--VAGYC-RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADAL 162
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV----------- 358
+ +M + G ++ +Y +LL+A C A + E++ AKG
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR---AKGCTPNIVTYNVII 219
Query: 359 -----------------------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ D +Y+T++K +K W ++ +M+
Sbjct: 220 NGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 279
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+ LI G+VE+A+ + ++M + C N+ CNI++ + + + D AF+
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKF 339
Query: 456 FRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ T+S T V G +R ++ + K+ + N
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGL---CRAERWNDAKELLKEMVRN--------------- 381
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ P T+N + C +A+M +M+ G + +++ L++ G+++
Sbjct: 382 --NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ + M P+ + YTT + ++RL A L EM H PN+VT+ L+
Sbjct: 440 SALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496
Query: 626 RARSRYGSLHE 636
+ G L E
Sbjct: 497 NFFCQKGFLDE 507
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 197/480 (41%), Gaps = 68/480 (14%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC-QRLLDSGEVEMFVGLMEVLEE 183
REGR+D +L +L G P + S LLK C + D E E+F E++E+
Sbjct: 224 REGRVDDARDLLNRLFSYGCQPDTV---SYTTLLKGLCASKRWDDVE-ELFA---EMMEK 276
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYAC---IVPRA--------------DILFCN 226
+P N+ ++ IR+ C +V RA + CN
Sbjct: 277 NCMP---------------NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCN 321
Query: 227 FV-REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLR 283
V K+ + A + + + +P+ T++ G+C + ++ + +++
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK--GLCRAERWNDAKELLKEMV 379
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
N N FN+ + + ++ + + + MQ+ G + +YN L+ C+ G+
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A E++ + K + TY+T++ +A+ A ++ +ML PN +T+
Sbjct: 440 SALELFRSMP-------CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L+N G +++A+ L E+M++ GC PN N L + C + A L +
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGL-V 551
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
SK + D + I + +D+ + H + + +P YN +
Sbjct: 552 SK---GVSPDVITFSSIIGILSKEDR-----VEEAIQMFHLA---QDIGMRPKALVYNKI 600
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + A+ + M + G PN ++ ILI+ G ++ A +L ++ G+
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 165/399 (41%), Gaps = 37/399 (9%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 209
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 265
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 266 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNM-EHKDKQSITNTP 494
D+A + + K + L + Y NT R + M E K+ I
Sbjct: 326 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
PN +Y L+ C D + L EM G P+ +++
Sbjct: 383 GVRPNH---------------VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++D G++ A + M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 428 VMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PNLV Y L+ ++ G E Q +Y +M G
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDG 523
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 326
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 417
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K NEM GL P
Sbjct: 418 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---NEMEKKGLVP 456
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 517 DNMLGDGLTPDDALYSALV------GSLH 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V N + +L+++ N D+ +++ M G + +YN+++ G+
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ E +E KG++ D+++Y+ +V +AL++ E+M G PN + ++
Sbjct: 442 AERFKNE---MEKKGLVP-DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+LI+ A G E+A L++ ML G P+ + L A V + D+
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPD----DALYSALVGSLHTDK 542
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 182/456 (39%), Gaps = 65/456 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDL--RSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN Y ++ G + A+ +D+ R T +Y A + +
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V +++ G D+ + N++L+A C G E ++ L + DV +Y+ ++
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPV---DEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC- 429
+ A+ W + E+M++AG PN +T+S+LI GL E+ + +M + GC
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 430 ----------------------------------EPNSQCCNILLQACVEACQFDRAFRL 455
PN C N LL+ A +++ A L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 456 F-----RSWTLSKTQVALGEDY---DGNTDRI-----SNMEHK-DKQSITNTPNFVPNSH 501
+ L + D+ +G DR+ +EH IT T
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 502 YSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
D+ +P T +Y I++K C+ V A LM++M G PN ++
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI+ G VE A+++LK M +G SPD+++Y+T I ++ +A L M
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ PN + Y ++ A S G +++V Q QD
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 201/517 (38%), Gaps = 98/517 (18%)
Query: 133 VGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELD 192
VGVL+ L+ G A D L+ Q + D G V+ E RL +++L
Sbjct: 166 VGVLRDLHGRGCA----LDVGNCNLVL---QAVCDQGPVD---------EAVRL-LRDLL 208
Query: 193 EEFRIVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
F +PDV N +R C+ R +G +DL+ + A
Sbjct: 209 PSFGC------EPDVVSYNAVLRGLCMA-----------RRWGHVQDLMEEMVAAGCP-- 249
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKF 307
PN+ T+I G + + ++ + ++ ++ ++++ L+
Sbjct: 250 ----PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ M G+ ++ YN LLK C A A+ + E+ + LD T++
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP----LDDVTFN 361
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+V ++V E ML G P+ IT++++IN GL+++A+ L M
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC PN+ I+L+ A +R + E
Sbjct: 422 GCRPNTVSYTIVLKGLCSA------------------------------ERWVDAEELMS 451
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
Q I P T+N L+ C +A L+ +M G S
Sbjct: 452 QMIQQ-----------------GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ IS++ +ID G +GN + AL++L +M + GMSP+ + Y++ R+ + +
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
FE ++ ++ + V Y ++ + + G + LA
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 120/318 (37%), Gaps = 55/318 (17%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ C AG A+ + V + + +TY +V+ AL V
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVP-------VAPNAYTYFPLVRALCARGRIADALAVL 134
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DM G P + + A A A+ + ++ GC + CN++LQA +
Sbjct: 135 DDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQ 194
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
D A RL R + +P+
Sbjct: 195 GPVDEAVRLLR-------------------------------------DLLPS------- 210
Query: 507 KRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
F +P +YN +++ C + V+ LM EM G PN ++++ LI +G
Sbjct: 211 --FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLF 268
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ++ M E G +PDV Y T I + +RL+ A + M Y + PN+V Y TL
Sbjct: 269 ERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL 328
Query: 625 LRARSRYGSLHEVQQCLA 642
L+ E + LA
Sbjct: 329 LKGLCSADRWEEAEGLLA 346
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 253 SPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFT 308
SPN+ T++ G+C + ++ + ++ ++ L+ FN L++ + +
Sbjct: 319 SPNVVCYNTLLK--GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+EV + M + G M D+ +Y ++ C G L E ++ + A G + + +Y+
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEG---LIDEAVMLLRSMAACGC-RPNTVSYTI 432
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A+ W A ++ M+ G PN +T+++LIN GLVEQA+ L ++ML G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C P+ + ++ +A D A L T+ + +A +G +++
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMR 540
M + + + + N+ SS KR TD R + M
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGE----------------TD--RAIEFLAYMV 594
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ G PN ++TILI G V+ A +IL
Sbjct: 595 SSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 178/397 (44%), Gaps = 37/397 (9%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + N Y + L+ + D VY +M + G D+ ++N+LL A
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQK 238
Query: 340 TVLAQEIYGEVK--HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A +++ ++K H E D FTY+ ++++ A +L + + ML G T N
Sbjct: 239 VDKAYKVFEDMKRRHCEP------DTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLN 292
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ---FDRAFR 454
I ++++I A A + ++A+ LF +M++ GC+PN ++LL V Q D
Sbjct: 293 LIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVE 352
Query: 455 LFRSWT-------LSKTQVALGEDYDGNTDRISNM----EHKDKQSITNTPNFVPNSH-- 501
+ + + +T LG + + NM + DK + + + +S
Sbjct: 353 MSKKYMNKQIYAYFVRTLSKLGHSSEAHR-LFCNMWNVHDKGDKDAYMSMLESLCSSGKI 411
Query: 502 YSSFD--KRFSFKPTTT---TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTIL 554
+ D RF K TT YN + A + L +M+ G P+ ++ IL
Sbjct: 412 AEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNIL 471
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I + G +G V+ A++I + + PDV++Y + I ++ + +A F+EM+ +
Sbjct: 472 ISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 531
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P++VTY TL+ +G +V+ +++ +M G
Sbjct: 532 NPDVVTYSTLIEC---FGKTDKVEMACSLFDEMIAEG 565
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 42/394 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ +Y D+ +L+I+ FN L++ A D K +V+++M++ D +Y I++
Sbjct: 206 KAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMI 265
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ AG T E + + KG L++ Y+T+++ A + A+ + M+
Sbjct: 266 RMTGKAGKT---DESLALFQAMLEKG-FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVE 321
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G PN T+S L+N G + + ++ E + N Q ++ +
Sbjct: 322 NGCQPNEFTYSVLLNVLVAEGQLNKLDNIVE---MSKKYMNKQIYAYFVRTLSKLGHSSE 378
Query: 452 AFRLF-RSWTL-----SKTQVALGEDY--DGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
A RLF W + +++ E G ++ ++ + T + N+ ++
Sbjct: 379 AHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFT 438
Query: 504 SFD---------------KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNEMRTV 542
+ K+ P TYNIL+ + Y R + E+
Sbjct: 439 ALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISS----YGRAGRVDSAVKIFEELENS 494
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
P+ IS+ LI+ G +G+V+ A K M+E G++PDVV Y+T I+ ++ +++ A
Sbjct: 495 NCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMA 554
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
SLF+EM PNLVTY LL R G E
Sbjct: 555 CSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAE 588
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 174/457 (38%), Gaps = 89/457 (19%)
Query: 221 DILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
DI N + + K + + A + ++ K+ P+ + +I + G G +S A++
Sbjct: 222 DIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALF 281
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDL--------------------KFTLEVYKN----- 314
+ + + TLN+ +N+++ A +FT V N
Sbjct: 282 QAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAE 341
Query: 315 --MQKLGVMADMAS-------YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ KL + +M+ Y ++ G++ A ++ + ++ KG D
Sbjct: 342 GQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKG----DKDA 397
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y ++++ + A+ + +T +TI ++++ A V L+E+M
Sbjct: 398 YMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMK 457
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
Q G P+ NIL+ + A + D A ++F S Q
Sbjct: 458 QDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQ-------------------- 497
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
P +YN L+ D EM+ G
Sbjct: 498 ---------------------------PDVISYNSLINCLGKNGDVDEAHMRFKEMQEKG 530
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L+P+ ++++ LI+ G + VE A + M +G SP++V Y + RS R +A
Sbjct: 531 LNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAV 590
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARS-RYGSLHEVQQ 639
L+ ++K + P+ +TY L R +S R+G L +Q
Sbjct: 591 DLYAKLKQQGLTPDSITYAVLERLQSGRHGKLRVRRQ 627
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 197/471 (41%), Gaps = 71/471 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
A+ ++ K+ SP + I+DV G G + K + E++RS+ + + + ++++
Sbjct: 236 AINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVL 295
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A + L+ + + ++ G +YN LL+ AG A + E++
Sbjct: 296 SACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCP 355
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
D TY+ +V +A A + + A V E M GV PN IT++++I+A AG ++
Sbjct: 356 A----DSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDE 411
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSKTQVA 467
A+ LF M +AGC PN+ N +L + + + ++ F + T +A
Sbjct: 412 ALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILA 471
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNF-VPNSHYSSFDK---------------RFSF 511
L + D+ N ++ +S P+ N+ S++ + R F
Sbjct: 472 LCG--NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 529
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN------ 563
TTYN L+ A D+ + ++++M++ G P S+++++ GN
Sbjct: 530 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 589
Query: 564 -----------------------------VEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ G+ + + ++ G PD+V + + + +
Sbjct: 590 IEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 649
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
R+ QA + + + + P+LVTY +L+ R G + ++ L +
Sbjct: 650 RNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 172/437 (39%), Gaps = 65/437 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P A I + + +GK AL+ + + K+ PN ++ + G +
Sbjct: 389 VMPNA-ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEM 447
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ D++S N +N+++ + N KF V++ M+ G D ++N L+ A
Sbjct: 448 IKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 507
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G+ V A ++YGE+ + V TY+ ++ A W+ V DM S G
Sbjct: 508 YGRCGSEVDASKMYGEM----TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 563
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA---CVEACQFD 450
P ++S ++ A G + E + + P+ LL A C +
Sbjct: 564 FKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSE 623
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
RAF LF K+
Sbjct: 624 RAFTLF--------------------------------------------------KKHG 633
Query: 511 FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+KP +N ++ + Y + + ++ + GL+P+ +++ L+D G A
Sbjct: 634 YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAE 693
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR-- 626
+ILK + + + PD+V+Y T IK R +++A + EM I+P + TY T +
Sbjct: 694 EILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 753
Query: 627 -ARSRYGSLHEVQQCLA 642
A YG + +V +C+A
Sbjct: 754 TAMGMYGEIEDVIECMA 770
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 190/472 (40%), Gaps = 114/472 (24%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 289 FTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 348
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E ++ + KGV+ + TY+T++ +
Sbjct: 349 MEENNCPADSVTYNELVAAYARAG---FSKEAAVVIEMMTQKGVMP-NAITYTTVIDAYG 404
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G PN
Sbjct: 405 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRA 464
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
TW++++ C N G+ + +F EM G EP+ N L+ A A +++
Sbjct: 465 TWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 524
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
T + +A D+ + IS+M+ K
Sbjct: 525 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK---------------------- 562
Query: 508 RFSFKPTTTTYNILMK--ACCTDYY---RVKALMNE---------MRTV----------- 542
FKPT T+Y+++++ A +Y R++ +NE +RT+
Sbjct: 563 --GFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALA 620
Query: 543 ------------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
G P+ + + ++ + + A IL+ + EDG++PD+V Y + +
Sbjct: 621 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLM 680
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ VR +A + + ++ Q++P+LV+Y T+++ R G + E + L+
Sbjct: 681 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLS 732
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 153/375 (40%), Gaps = 52/375 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQK 317
TI+ G Y K+ ++E ++ + + +N +++V + L V + M+
Sbjct: 222 TILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRS 281
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G+ D + + +L AC G A++ + E+K + TY+ +++VF A
Sbjct: 282 KGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCG----YEPGTVTYNALLQVFGKAG 337
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL V ++M +++T++ L+ A A AG ++A + E M Q G PN+
Sbjct: 338 VYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYT 397
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A +A + D A +LF S K+ + NT +
Sbjct: 398 TVIDAYGKAGKEDEALKLFYSM-------------------------KEAGCVPNTCTY- 431
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
N+ S K+ + N ++K C +M++ G PN +W ++
Sbjct: 432 -NAVLSMLGKK-------SRSNEMIKMLC-----------DMKSNGCFPNRATWNTILAL 472
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
CG G + ++ + M+ G PD + T I R A ++ EM
Sbjct: 473 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 532
Query: 618 LVTYITLLRARSRYG 632
+ TY LL A +R G
Sbjct: 533 VTTYNALLNALARKG 547
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 143/369 (38%), Gaps = 92/369 (24%)
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWW 379
M D+ +Y +L A G A ++ +K + L TY+ I+ VF + W
Sbjct: 214 MLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTL----VTYNVILDVFGKMGRSW 269
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ L V E+M S G+ + T S++++ACA GL+ +A F E+ G EP + N L
Sbjct: 270 RKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNAL 329
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
LQ +A + A + + ME N P
Sbjct: 330 LQVFGKAGVYTEALSVLK-----------------------EMEE------NNCP----- 355
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTV-GLSPNHISWTILIDA 557
+ TYN L+ A + + A++ EM T G+ PN I++T +IDA
Sbjct: 356 -------------ADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDA 402
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL------------ 605
G +G + AL++ M+E G P+ Y + + + R + +
Sbjct: 403 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPN 462
Query: 606 -----------------------FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F EMK +P+ T+ TL+ A R GS + +
Sbjct: 463 RATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK--- 519
Query: 643 VYQDMWKAG 651
+Y +M +AG
Sbjct: 520 MYGEMTRAG 528
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 51/297 (17%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G LKLD +V++ + +A K+ + + + ++++++A + G E+
Sbjct: 176 GALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEK 235
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A++LFE M + G P N++L D ++ RSW + LG
Sbjct: 236 AINLFERMKEMGPSPTLVTYNVIL---------DVFGKMGRSW-----RKILG------- 274
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKA 534
+ M K + FD+ T + ++ AC + K
Sbjct: 275 -VLEEMRSKGLK----------------FDE--------FTCSTVLSACAREGLLREAKD 309
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
E+++ G P +++ L+ G +G AL +LK M E+ D V Y +
Sbjct: 310 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYA 369
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R+ K+A + E M + PN +TY T++ A YG + + L ++ M +AG
Sbjct: 370 RAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDA---YGKAGKEDEALKLFYSMKEAG 423
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I +
Sbjct: 609 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQS 663
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 664 IHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKG- 722
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 723 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNEL 779
Query: 400 TWSSLINACANAGLVEQAM 418
T+ +++ AG +AM
Sbjct: 780 TFKMVVDGYCRAGKYSEAM 798
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P+ + RT++ C S + + ++ +FNS++++ + + +
Sbjct: 601 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 660
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+++ + G+ D+ +YN L+ G A+EI +K LE K LK D+ +Y+T++K
Sbjct: 661 LQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEI---LKTLE-KSQLKPDLVSYNTVIK 716
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F Q A+++ +M G+ P T+++ ++ G+ + + E M + C P
Sbjct: 717 GFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRP 776
Query: 432 NSQCCNILLQACVEACQFDRA 452
N +++ A ++ A
Sbjct: 777 NELTFKMVVDGYCRAGKYSEA 797
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 27/339 (7%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG D SY L+ C G T A ++ V +++ +V Y+TI+ K
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD----GNLVQPNVVMYNTIIDSMCKVK 239
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
A + +M+S G++P+ +T+S+LI+ G ++ A+ LF +M+ +P+ N
Sbjct: 240 LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299
Query: 438 ILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL+ A + + F + + V DG E +SI NT
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG---YCLVKEVNKAKSIFNTM 356
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWT 552
+ P +Y+I++ C + L EM + P+ ++++
Sbjct: 357 ------------AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
LID SG + ALQ++ M + G+ P++ Y + + ++ ++ +A +L + K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QP++ TY L++ + G L + ++ V++D+ G
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARK---VFEDLLVKG 500
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 161/383 (42%), Gaps = 32/383 (8%)
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
M+ R I +L + N+ +N + L + F V+ + K+G + D ++ L K
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGL-------IPFAFSVFAKILKMGYVPDTITFTTLSK 163
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
CL G A + +V L D +Y T++ + AL + + +
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALG----FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGN 219
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
V PN + ++++I++ LV +A LF EM+ G P+ + L+ + A
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDA 279
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFS 510
LF L + + Y N + N KD + + FD +
Sbjct: 280 IDLFNKMILENIKPDV---YTFNI--LVNAFCKDGKM---------KEGKTVFDMMMKQG 325
Query: 511 FKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
KP TYN LM C + + K++ N M G++P+ S++I+I+ + A+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K M + PDVV Y++ I +S R+ A L ++M + PN+ TY ++L A
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ H+V + +A+ G
Sbjct: 446 CK---THQVDKAIALLTKFKDKG 465
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 55/361 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ +I I G + ++ + +N+ ++Y FN L+N D +K
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ M K G+ + +YN L+ CL A+ I+ + A+G + D+ +YS ++
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM----AQGGVNPDIQSYSIMI 372
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F K + A+ + ++M + P+ +T+SSLI+ + +G + A+ L ++M G
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N +L A + Q D+A L + KDK
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKF-------------------------KDK--- 464
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
F+P +TY+IL+K C + + ++ G + +
Sbjct: 465 -------------------GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++TI+I G AL +L M ++G PD Y I + A L E
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
Query: 609 M 609
M
Sbjct: 566 M 566
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 18/315 (5%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++ M G+ D+ +Y+ L+ C+ G A +++ ++ LE +K DV+T++
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI-LEN---IKPDVYTFNI 300
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V F + V + M+ G+ PN +T++SL++ V +A +F M Q G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ Q +I++ + +FD A LF+ K + Y D +S
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH-RKNIIPDVVTYSSLIDGLSK-----SG 414
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSP 546
I+ V H D+ P TYN ++ A C + + AL+ + + G P
Sbjct: 415 RISYALQLVDQMH----DR--GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++ILI SG +E A ++ + + G + DV AYT I+ +A +L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 607 EEMKHYQIQPNLVTY 621
+M+ P+ TY
Sbjct: 529 SKMEDNGCIPDAKTY 543
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+ F K + A+ + + P++ ++ID G + + + + + V
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 288 TLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NI +NS+++ H + + + + G D+++Y+IL+K C +G A++
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
++ + L KG LDV+ Y+ +++ F + AL + M G P+ T+ +I
Sbjct: 492 VFED---LLVKGY-NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + A L EM+ G N
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y+ V L +M G+ PN ++ ILI+ G + A + + + G PD + +TT
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
K +++QAF +++ + ++Y TL+ + G
Sbjct: 161 LSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG 204
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 64/330 (19%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK---GVLKLDVFTYS 367
V + M +LG + D+ SYN LLK C + A E+ H+ A G DV +Y+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL----HMMADDRGGGSPPDVVSYN 205
Query: 368 TIVKVF--------ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
T++ F A+ A++V M+ GV P+ +T++S+++ ++G ++A+
Sbjct: 206 TVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
++M G EPN + L+ + + A ++F S T
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT------------------- 306
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
KR +P TY L++ C + +++ L +
Sbjct: 307 ---------------------------KR-GLEPDIATYRTLLQGHCKEGRVIESEKLFD 338
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M +G+ P+ I++ LID C +G ++ A ++L M G+ PD+V Y T I R
Sbjct: 339 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 398
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R+ A +LF+EM + PN++TY +L+
Sbjct: 399 RMDDALALFKEMVSSGVSPNIITYNIILQG 428
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 57/351 (16%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMA 322
G C AI + +RS V N+ ++SLMN + + T +++ +M K G+
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+A+Y LL+ C G + +++++ L + +K D+ TY+T++ A A
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLF----DLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
K+ M+S GV P+ +T+ +LIN ++ A+ LF+EM+ +G PN NI+LQ
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ A L+ S T S TQ+ L
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLEL---------------------------------- 454
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGG 560
+TYNI++ C + +AL + L ++ I+I A
Sbjct: 455 -------------STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
G ++ A + +G+ PDV Y+ + + L++ LF M+
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 162/398 (40%), Gaps = 43/398 (10%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V H + Y M + G V + +Y IL
Sbjct: 39 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDM 389
+ CC AG L G V K ++D T++ ++K + AD + V M
Sbjct: 99 IGCCCRAGRLDLGFAALGNV----VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ---AGCEPNSQCCNILLQACVEA 446
G P+ ++++L+ + ++A+ L M G P+ N +L
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG---- 210
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
F+ +K + D + ++ M T N + + + SS
Sbjct: 211 --------FFKEGIQTKLTA---QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 259
Query: 507 KRFSF-----------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTI 553
+ + +P TY+ LM C + +A + + M GL P+ ++
Sbjct: 260 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 319
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
L+ G V + ++ +M G+ PD++ Y T I C + ++ +A L M
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 379
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P++VTY TL+ Y + + LA++++M +G
Sbjct: 380 VKPDIVTYGTLING---YCRVSRMDDALALFKEMVSSG 414
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 146/367 (39%), Gaps = 54/367 (14%)
Query: 281 DLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
D+ S N LN + + + A + +EV M K GVM D +YN +L C +G
Sbjct: 200 DVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 259
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+E G +K + + GV + +V TYS+++ A K+ + M G+ P+
Sbjct: 260 ---PKEAIGTLKKMRSDGV-EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ +L+ G V ++ LF+ M++ G +P+ N L+ C A + D A +L S
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V++G KP TY
Sbjct: 376 ------VSVG-----------------------------------------VKPDIVTYG 388
Query: 520 ILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ C + AL EM + G+SPN I++ I++ + A ++ + +
Sbjct: 389 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 448
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G ++ Y + ++ +A +F+ + +Q T+ ++ A + G + E
Sbjct: 449 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 508
Query: 638 QQCLAVY 644
+ A +
Sbjct: 509 KDLFAAH 515
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ ++++ G ++R I++ + + + +I + +L+ + + + + ++
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M ++GV D+ +YN L+ CCLAG A ++ + + + GV K D+ TY T++
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL---LASMVSVGV-KPDIVTYGTLIN 392
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL + ++M+S+GV+PN IT++ ++ + A L+ + ++G +
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
NI+L + D A R+F++ L+ Q+
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 487
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+ID C + G ++ + + S V +I + +L+N + L +
Sbjct: 347 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 406
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+K M GV ++ +YNI+L+ T A+E+Y + K +L++ TY+ I+
Sbjct: 407 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI----TKSGTQLELSTYNIILH 462
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AL++ +++ + T T++ +I A G +++A LF G P
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSW 459
+ + +++ + +E + LF S
Sbjct: 523 DVRTYSLMAENLIEQGSLEELDDLFLSM 550
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 29/299 (9%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
LDV +Y+T++K AD+K A ++ E++ +AG +PN + ++++I+ AG +E +
Sbjct: 106 LDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 165
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FEEM + C P +++ +A A ++F + K V Y D S
Sbjct: 166 FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM-VQKGCVPDTITYTTLIDGFS 224
Query: 481 NMEHKDKQS------ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-DYY-RV 532
D+ +T P +PT TY ++ C D
Sbjct: 225 KASKMDEARKLLDVMLTKGP-----------------EPTAVTYGSIVHGFCKLDMINEA 267
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K ++ +MR G P +T L+ G E A Q+L M G +PDV+ YT+ I +
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 327
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R+ +A +F+ M P+ +TY T+++ S+ G++ + L + M K+G
Sbjct: 328 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL---MAKSG 383
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 173/427 (40%), Gaps = 61/427 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIY 279
I + + F K + A + D P +I+ G C M +++ +
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH--GFCKLDMINEAKEVI 271
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+R + +++F SL++ ++ + +V M G D+ Y L+
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 331
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + KG D TY TI++ F+ + A ++ E M +GV P+
Sbjct: 332 GRVPEARHVF---DSMIEKGCAP-DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++SL++ V+QA +++ M+ +G +PN+ N+L+ + + DRAF LF+
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L K +V PT +
Sbjct: 448 EM-LEKEEVP---------------------------------------------PTLVS 461
Query: 518 YNILMKACCTDYYRVKALMN--EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y IL+ +A + EM G+ P ++T LI + +G + A ++++ M
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL---LRARSRYG 632
+ G++PDV AY+ I + S + A+ +F+EM PN VTY L RA R
Sbjct: 522 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 581
Query: 633 SLHEVQQ 639
L V+Q
Sbjct: 582 DLEAVKQ 588
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 176/408 (43%), Gaps = 47/408 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+L++ + N+ + ++++ + A ++ L+ ++ M + +Y +++ C
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A A +++ + + KG + D TY+T++ F+ A A K+ + ML+ G
Sbjct: 190 KAQMLPDACKVF---EQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P +T+ S+++ ++ +A + +M + GCEP LL + + + A+++
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 456 FRSWTLS--KTQVALGE---DYDGNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF 509
T V L D +T R+ H I P++ Y + + F
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNF 363
Query: 510 S-------------------FKPTTTTYNILMKACCTDYYRVK------ALMNEMRTVGL 544
S P YN LM Y +++ + + M G+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG----YVKLERVDQAFGVYDRMVASGI 419
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++ +L+ G + A + K M E + + P +V+YT I ++ R+ +AF
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+EM I P TY +L+ + ++ G + E ++ + +DM K G
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV---EDMVKLG 524
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 61/239 (25%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P ++++++I+ A+ +++A F M+ GCEP+ L+ +A Q
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+L Q++ KRF +
Sbjct: 62 HKLLN------------------------------QAL----------------KRF--R 73
Query: 513 PTTTTYNILMKACC------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P Y ++ C T Y+R T S + IS+T +I S ++
Sbjct: 74 PDVFLYTSVIHGYCKAGDLDTGYFRA-------VTPKASLDVISYTTVIKGLADSKRIDE 126
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ + ++ G SP+VVAYT I +++ R++ FEEM P TY ++
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 39/161 (24%)
Query: 512 KPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDA-C-GGSGNV 564
+PT +YN ++ + + Y+ N M G P+ I++T LI C G V
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYK---FFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 565 EGAL--QILKIMRED-----------------------GMSP----DVVAYTTAIKVCVR 595
L Q LK R D ++P DV++YTT IK
Sbjct: 61 GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
SKR+ +A LFEE+K PN+V Y ++ + G + +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIED 161
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 146/349 (41%), Gaps = 59/349 (16%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ + FNSL+ L +++ M G D SY L++ C G A E++
Sbjct: 163 DAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF 222
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E++ + D++T++ +VK DA+ + L + + M G P T +++L++
Sbjct: 223 RELE--------QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
E+A + EM G P + C ++ A + A R+F S L +
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE-- 332
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
P TYN +++ C
Sbjct: 333 ---------------------------------------------PNVWTYNAMVQGFCN 347
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y+ AL+++MR G+ P+ +++ +LI G++E A ++L++M +G++ D
Sbjct: 348 VGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYT 407
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
Y I ++ ++ +A SLF+ +++ I+PN VT+ T++ + G
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 29/349 (8%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + + M++LG +Y L+ C A+++ E + G++ V T +
Sbjct: 250 LYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE---MFDNGLVPCAV-TCTA 305
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V + A++V E M G PN T+++++ N G V +AM L ++M + G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT--DRISNMEHK 485
EP+ N+L++ C++ + AFRL R L + + Y N D +
Sbjct: 366 VEPDVVTYNLLIRGQCIDG-HIESAFRLLR---LMEGNGLAADQYTYNVLIDALCKTGKV 421
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
D+ S + + R +P + T+N ++ C + + +M + G
Sbjct: 422 DEAC----------SLFDGLEYR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 544 LSPNHISWTILID-ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+P+ +++ I+ C G+ EG I +++++D + P V YT I + + A
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD-VKPSTVNYTIVIDRLFKERNYGLA 529
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ +M P++VTY T +RA G LHE + V +M K G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN---VVMEMKKGG 575
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 40/299 (13%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGV-TPNTITWSSLINACANAGLVEQAMHLFEE 423
T+ +++ F+ + L++ M G P T+++LI A + A
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL------SKTQVALGEDY--DGN 475
M+++G P++ N L+ Q D A LF L + + AL E + G
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA- 534
D + + +Q P T+ L+K C D R +
Sbjct: 215 VDEALELFRELEQ------------------------PDMYTHAALVKGLC-DARRGEEG 249
Query: 535 --LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
++ +M+ +G P ++ L+D E A ++L M ++G+ P V T +
Sbjct: 250 LYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNA 309
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
R R+ A +FE MK +PN+ TY +++ G +V + +A+ M + G
Sbjct: 310 YCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVG---KVYKAMALLDQMRECG 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/448 (16%), Positives = 166/448 (37%), Gaps = 63/448 (14%)
Query: 201 CVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMY 257
C +PDV NL IR CI + SA R + + + + Y
Sbjct: 364 CGVEPDVVTYNLLIRGQCI-----------------DGHIESAFRLLRLMEGNGLAADQY 406
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--VYKNM 315
+ID G ++ ++++ L + + N FN+++N KF + + M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G D +Y+ ++ C T ++E + + K V K Y+ ++
Sbjct: 467 VSAGCAPDTYTYSPFIENLC---KTKGSREGLSFIDEMLQKDV-KPSTVNYTIVIDRLFK 522
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ + +A ++ M+S G +P+ +T+++ + A N G + +A ++ EM + G ++
Sbjct: 523 ERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMA 582
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N L+ + D A + + T + + PN
Sbjct: 583 YNTLIDGHTSIGKTDHAVTILKHMT----------------------------GVASMPN 614
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSPNHISW 551
H++ F ++ +K + V L M+ + + ++
Sbjct: 615 -----HFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAY 669
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+++ ++ ++ M+ED + + YT+ + + + A++L M
Sbjct: 670 LAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIG 729
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ PNL++Y LL + G ++
Sbjct: 730 HGFLPNLISYQYLLSGFTAEGQADRAKE 757
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR + K +PN C T++D G K+ ++++ ++ + N FN+++N
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ E+ M++ D+ +Y L C G+ A I E+++L
Sbjct: 533 GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAP 592
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
++ +++++ AK + +M + G++PNT+ + +LI G + A
Sbjct: 593 TIEF----FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTA 648
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
+L+ EM++ G PN C+ L+ +FD A + ++ TD
Sbjct: 649 YNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV--------------GTD 694
Query: 478 RISNMEHKDKQSITNTPNFVP----NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYR 531
I ++ + I NF+ +H+S+ +NI++ C
Sbjct: 695 MIPDIS-APRLEIGKVANFIDTVAGGNHHSA----------KIMWNIVIFGLCKLGRIED 743
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
K L+ +++ G ++ +++ LI C SG V+ A + M G++P++V Y + I
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+S L +A SLF+++ I PN +TY TL+ + G + E
Sbjct: 804 GLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 173/400 (43%), Gaps = 48/400 (12%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++R+ L++ NS++N A DL T+ V++ MQ+ G + D + I+ KA C
Sbjct: 195 VFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYC 254
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
V A E V+ + GV ++++ Y ++ + + A ++ + + G +
Sbjct: 255 KVKGVVHALEF---VEEMTKMGV-EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFS 310
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC--NILLQACVEA-CQFDR- 451
PN +T++ L+ N +E+A + +E+ + N Q + A + CQ R
Sbjct: 311 PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRK-----NKQLVVDEAVFGAVINGYCQMGRM 365
Query: 452 --AFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A RL S+ QV L G G N+ H+ + NS
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 502 YSSFDK---------------RFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRT 541
+ K R F TT TYN L+K C+ D R+ LM +
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK-- 483
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G++PN IS + L+D SG E AL + K G++ + + T I + +R+ +
Sbjct: 484 -GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPE 542
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A L ++MK ++ P+++TY TL + G + + L
Sbjct: 543 AEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 173/425 (40%), Gaps = 40/425 (9%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA---IYEDLRSQN 286
E G+ D A R D+ SPN+ + T++ V G C + A + E +++
Sbjct: 290 EVGQTND---ARRMLDSLPGRGFSPNI-VTYTLL-VKGYCNEKNMEEAEGVVQEIRKNKQ 344
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ VF +++N ++ + M + ++ YNI++ C G V A
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
I E + GV + D ++Y+++V + A + ML G T+T+++L
Sbjct: 405 NILHE---MTGVGV-RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNAL 460
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTL 461
+ + G ++ A+ L+ ML+ G PN C+ LL ++ + ++A L++ + L
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520
Query: 462 SKTQVALGEDYDG--NTDRISNMEH-KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+K +G +R+ E DK K++ P TY
Sbjct: 521 AKNTTTFNTVINGLCKIERMPEAEELVDKM------------------KQWRCPPDIITY 562
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L C D R ++NE+ +G +P + LI + IL M
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN 622
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+SP+ VAY I + L A++L+ EM + PNL +L+ R G E
Sbjct: 623 RGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDE 682
Query: 637 VQQCL 641
L
Sbjct: 683 ANLVL 687
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 135/338 (39%), Gaps = 82/338 (24%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ DL +A Y + PN++IC +++ G + ++ + ++L ++ +I
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700
Query: 293 V-----------FNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+++ N H K +NI++ C G
Sbjct: 701 APRLEIGKVANFIDTVAGGNHHSAKIM------------------WNIVIFGLCKLGRIE 742
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + ++K KG + D FTYS+++ + + + +A +++ MLS G+TPN +T+
Sbjct: 743 DAKNLLADLKD---KGFVA-DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+SLI +G + +A+ LF+++ G PN+ N L+ + AF+L
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL------ 852
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
KQ + PT TY+IL
Sbjct: 853 -------------------------KQRMIEE----------------GIHPTVFTYSIL 871
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+ CT Y +A L+++M + PN++++ LI
Sbjct: 872 INGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNV 287
E GK + + + A H S+ M+ I + G+C G ++ + DL+ +
Sbjct: 705 EIGKVANFIDTV----AGGNHHSAKIMWN----IVIFGLCKLGRIEDAKNLLADLKDKGF 756
Query: 288 TLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ + ++SL++ + D+ F L M +G+ ++ +YN L+ C +G A
Sbjct: 757 VADNFTYSSLIHGCSASGFVDVAFDLR--DTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
++ K L KG+ + TY+T++ + A K+K+ M+ G+ P T+S
Sbjct: 815 VSLF---KKLWTKGI-SPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
LIN G +E+A+ L ++M++ +PN L+Q V D
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 15/241 (6%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L+ A ANAG ++ A+ +F+EM GC + + CN +L + +F +
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE-----Q 233
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
Q A G D T I + + + + FV + + Y+ +M
Sbjct: 234 MQRA-GALPDKFTVAIMAKAYCKVKGVVHALEFVEEM------TKMGVEVNLVAYHAVMN 286
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG-MS 580
C + +++ + G SPN +++T+L+ N+E A +++ +R++ +
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV 346
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
D + I + R++ A L EM ++Q NL Y ++ + G + E
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406
Query: 641 L 641
L
Sbjct: 407 L 407
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 120/290 (41%), Gaps = 18/290 (6%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
++ +++ A+A AL+V ++M + G + + +S++N A G + + +FE+M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+AG P+ I+ +A + A T +V L + +
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR-T 541
D + + ++ +P F P TY +L+K C + + ++ E+R
Sbjct: 295 NDARRMLDS---LPGR---------GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKN 342
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
L + + +I+ G +E A ++L M + + ++ Y I + R+ +
Sbjct: 343 KQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVE 402
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ EM ++P+ +Y +L+ + G ++ + Y M + G
Sbjct: 403 AHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMN---KAFETYNTMLRNG 449
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 36/349 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++MQ GV D+ +Y L++ C A + A E+ E+ + ++ +V YS ++
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM----CESGIEPNVVVYSCLL 190
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A W+ KV E+M G+ P+ + ++ LI++ G V++A + ++M++ G E
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--------------DYDGNT 476
PN N+L+ + + A L R+ L K VAL + D
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSL-RNNMLEKG-VALDAVTYNTLITGLSGVLEMDEAM 308
Query: 477 DRISNMEHKDKQSITN--TPNFVPNSHYSSFDKRFSFKP-----------TTTTYNILMK 523
+ M H + N T N V + + R +F+ T+N+L+
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ KA LM+EM + GL P+ +++ILI+ V+ A +L MR DG+ P
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++V Y + ++QA + F+EM H + ++V Y T++ R
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACR 476
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 155/337 (45%), Gaps = 31/337 (9%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYN +L A C G + A V E + +Y+T+++ + A
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPT----AVSYTTLMRALCAERRTGQA 132
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ + DM ++GV P+ +T+ +LI +A V++A+ L EM ++G EPN + LLQ
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192
Query: 443 CVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+A +++ ++F + + V + Y G D + E K K++
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVM---YTGLIDSLCR-EGKVKKAT---------- 238
Query: 501 HYSSFDKRF--SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILID 556
DK +P TYN+L+ + C + +L N M G++ + +++ LI
Sbjct: 239 --QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLIT 296
Query: 557 ACGGSGNVEGALQILK--IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G ++ A+ +L+ I E + P+VV + + I ++ R++QAF + + M
Sbjct: 297 GLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
NLVT+ L+ R +H+V++ + + +M +G
Sbjct: 357 ACNLVTFNLLIGGLLR---VHKVKKAMELMDEMASSG 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 182/445 (40%), Gaps = 72/445 (16%)
Query: 268 ICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+C + +A+ D+++ V ++ + +L+ +A D+ +E+ + M + G+ +
Sbjct: 123 LCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPN 182
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ Y+ LL+ C AG +++ E + +G+ + DV Y+ ++ + A
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEE---MSGRGI-EPDVVMYTGLIDSLCREGKVKKAT 238
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+V + M+ G+ PN +T++ LIN+ G V++AM L ML+ G ++ N L+
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Query: 444 VEACQFDRAFRLFRSWTLSKTQ-----VALGEDYDG--NTDRISN-MEHKDKQSITNTP- 494
+ D A L +T V G T R+ + +D +
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358
Query: 495 NFVP--------------NSHYSSFDKRFS--FKPTTTTYNILMKACCTDYY--RVKALM 536
N V D+ S +P + TY+IL+ C + R ++L+
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVE------------------------------- 565
++MR G+ P + + L+ A G +E
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLR 478
Query: 566 ---GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
A + LK M ++G+ PD V Y+ I + S L A + ++M P++ +
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFD 538
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDM 647
+L++ YG+ + ++ L + ++M
Sbjct: 539 SLIKG---YGAKGDTEKVLELIREM 560
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 149/400 (37%), Gaps = 89/400 (22%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ + +ID G K+ + + + + + N+ +N L+N + +K + +
Sbjct: 216 PDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSL 275
Query: 312 YKNMQKLGVMADMASYNILLKACCLAG-------NTVLAQEIYGE--------------- 349
NM + GV D +YN L+ L+G +L + I+GE
Sbjct: 276 RNNMLEKGVALDAVTYNTLITG--LSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ + A+ ++ T++ ++ + A+++ ++M S+G+ P
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++ T+S LIN V++A L +M + G EP LL A E ++A F
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
HK+ K
Sbjct: 454 DEM------------------------HKN------------------------CKLDVV 465
Query: 517 TYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y+ ++ C D + + M GL P+ +++++LI+ SG++ A ++LK M
Sbjct: 466 AYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
G PDV + + IK ++ L EM I
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDI 565
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 165/398 (41%), Gaps = 35/398 (8%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
V G C G +R + +++ V +N +NSL++ D E+ K M+ G+
Sbjct: 74 VDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGI 133
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +Y IL+ A + + ++ E+K G DV+ YS+++ + A +
Sbjct: 134 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSG----DVYFYSSVINAYCRAGNVR 189
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A +V ++ + G+ PN T+ +LIN G +E A L +M G N N ++
Sbjct: 190 RASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 249
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNTPN 495
D+A + + K + L + Y NT R + M+
Sbjct: 250 DGYCRKNMVDKALEI--KMIMEKMGIEL-DVYTYNTLACGLRRANRMDE----------- 295
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
N +K +P +Y L+ C D + L EM G P+ +++ +
Sbjct: 296 -AKNLLRIMIEK--GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV 352
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
++D G++ A + M + G+ PD+ +Y + + ++ A LFEEMK
Sbjct: 353 MMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRG 412
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PNLV Y L+ ++ G E Q +Y +M G
Sbjct: 413 SKPNLVAYTALISGLAKEGRSEEAFQ---LYDNMLGDG 447
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 67/389 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + ++D D K A++E+++S+N++ ++Y ++S++N A +++ EV
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G+ + +Y L+ C G A+ + V ++ +GV ++ ++T++
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGV-GINQIVFNTMID 250
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ AL++K M G+ + T+++L A +++A +L M++ G P
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ A RLFR GN
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMA-------------GN---------------- 341
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYRVKALMNEMRTVGLSP 546
+P+ TYN++M K + R K NEM GL P
Sbjct: 342 ------------------GAEPSLVTYNVMMDGYIKKGSIREAERFK---NEMEKKGLVP 380
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ S+ L+ +G V+ AL++ + M++ G P++VAYT I + R ++AF L+
Sbjct: 381 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 440
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ M + P+ Y L+ GSLH
Sbjct: 441 DNMLGDGLTPDDALYSALV------GSLH 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ V N + +L+++ N D+ +++ M G + +YN+++ G+
Sbjct: 306 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 365
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ E +E KG++ D+++Y+ +V +AL++ E+M G PN + ++
Sbjct: 366 AERFKNE---MEKKGLVP-DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 421
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+LI+ A G E+A L++ ML G P+ + L A V + D+
Sbjct: 422 ALISGLAKEGRSEEAFQLYDNMLGDGLTPD----DALYSALVGSLHTDK 466
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 30/367 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G K+ +++++ Q ++ N +N L++ ++ K + +++ M + GV D+ +Y
Sbjct: 220 GQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTY 279
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C G ++ A++++ + K K D Y T++ +A + ++ +
Sbjct: 280 NTLMVYLCKNGRSMEARKVFDSM----VKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M+ G P+ ++ LI A A G+V++AM F +M Q G PN ++ A
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395
Query: 448 QFDRAFRLFR---SWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ D A F S L+ V G D+ E + I
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR---------- 445
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
P T +N L+ C + R K + + M V + + I++T LID
Sbjct: 446 -------GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCL 498
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G V+ A ++L+ M DG+ P+ V Y T I ++ R++ A SLF +M + P +V
Sbjct: 499 DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVI 558
Query: 621 YITLLRA 627
Y T+L
Sbjct: 559 YSTILHG 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 49/317 (15%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG + SYNILLK C + A + + + +G DV +Y+T++
Sbjct: 156 RRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVING 215
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
A + ++ML G++PN IT++ L++ ++G ++A+ +F +M + G EP+
Sbjct: 216 LLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPD 275
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N L+ V C+ R+ + +
Sbjct: 276 VVTYNTLM---VYLCKNGRSMEARKVFD-------------------------------- 300
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHIS 550
+ V H KP ++ Y L+ T+ Y V+ L++ M G P+H
Sbjct: 301 --SMVKKGH----------KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI 348
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILI A G V+ A+ MR+ G+ P++V Y T + R ++ A S F+ +
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408
Query: 611 HYQIQPNLVTYITLLRA 627
+ PN V + TL+
Sbjct: 409 SEGLTPNGVVFRTLIHG 425
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 42/285 (14%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ D+ TYS ++ + A +A ++ G T IT+S L+ + AM
Sbjct: 93 RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 420 L-FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ M GC PN+ NILL+ + + +A L + T+ D T
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
I+ + + + L KA C L +E
Sbjct: 213 INGLLREGQ---------------------------------LDKAYC--------LFDE 231
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+SPN I++ L+ SG + A+ I + M DG+ PDVV Y T + ++ R
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGR 291
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+A +F+ M +P+ Y TLL + G L ++ Q L V
Sbjct: 292 SMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDV 336
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F + + K + A+ A+ ++ PN+ T++D G + + ++ L
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S+ +T N VF +L++ K+ E+ M G+ + +N LL C G
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ I+ + ++ ++ DV TY+T++ + A K+ E M+ GV PN +T
Sbjct: 468 TRAKNIFDLMVRVD----VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVT 523
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++++IN G +E A LF +M G P
Sbjct: 524 YNTIINGYCKNGRIEDACSLFRQMASKGVNPG 555
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--E 310
+PN + RT+I C + K+ + ++ + + N FN+L+N + T
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M ++ V D+ +Y L+ CL G A ++ ++ + GV K + TY+TI+
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL---LEGMVLDGV-KPNEVTYNTII 528
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + A + M S GV P + +S++++ + A L+ M++ G +
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
NI+LQ + D A R+F + L
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCL 619
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN TII+ G C G + +++ + S+ V I +++++++ +
Sbjct: 519 PNEVTYNTIIN--GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+Y M K G+ + +YNI+L+ C T A ++ + ++ L T++ +
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID----FHLQNRTFNIM 632
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A + +L+ G+ PN +T+ ++ + GL+E+ LF + + GC
Sbjct: 633 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 692
Query: 430 EPNSQCCNILL 440
+S+ N L+
Sbjct: 693 TADSRMLNALV 703
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 33/347 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++++ ++ V+NSL+ + L+V M + G
Sbjct: 359 GLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP 418
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAI---VKGYLP-DVFTFNTLIDGYCKRLKLDSA 474
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M + G+ P+ IT++S++N AG ++ FEEM+ GC PN+ NIL++
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534
Query: 443 CVEACQFDRA----FRLFR--------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ Q + A R+ + S+ D DG ++ K +
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 491 TNTPNFVPNSHYSSFDKRFS-----------FKPTTTTYNILMKACC--TDYYRVKALMN 537
+T N + ++ S + + + +KP TY IL+ C + R A +
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
EM + G P+ ++ +++ + V A+ I+ IM G+ P+VV
Sbjct: 655 EMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 58/375 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASY 327
G +R +++++ ++V ++ FN++++ D+ + + + K G+ A+ +
Sbjct: 190 GHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTC 249
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
NI ++ C G +E V+ + A + DV TY+T+++ Q A +
Sbjct: 250 NIWIRGLCEDGRL---EEAVALVERMGA--YVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS-QCCNILLQACVEA 446
M++ G P+ T++++I+ +G++++A L ++ + G P+ C+++ C E
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+RA LF + + KD
Sbjct: 365 -DIERALELF-----------------------NEAQAKD-------------------- 380
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP YN L+K C + AL MNEM G P+ ++ I+I+ GN+
Sbjct: 381 ----LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++ G PDV + T I + +L A L E M Y I P+++TY ++
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 625 LRARSRYGSLHEVQQ 639
L + G EV +
Sbjct: 497 LNGLCKAGKAKEVNE 511
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 37/410 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG--VMADMASY 327
GD M+S A+ + + ++ N + N + D + E ++++G V D+ +Y
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLE-EAVALVERMGAYVAPDVVTY 283
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L++ C A + G + + +G + D FTY+TI+ + + Q A ++ +
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMN---QGCIP-DDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
D + G P+ +T+ SLIN G +E+A+ LF E +P+ N L++
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQSITNT-------PN-FVP 498
A ++ + Y+ + + M + D + N P+ F
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWT-YNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458
Query: 499 NSHYSSFDKR---------------FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
N+ + KR + P TYN ++ C V EM
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN I++ ILI+ +E A ++ M +DG+ PD V++ T I R+ L
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A+ LF+++ T+ L+ A Y S +Q ++ +M G
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGA---YSSKLNMQMAEKIFGEMISKG 625
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 150/365 (41%), Gaps = 64/365 (17%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+N HD +VY M GV D ++ + LK+ CL G +A + ++
Sbjct: 112 IMDALVNAAYHDQAH--KVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL---LRS 166
Query: 353 LEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L +G Y T+V+ ++A + A + ++ML V P+ T++++++A
Sbjct: 167 LSERGC-DAKPAAYCTVVRGLYAHGHGYN-ARHLFDEMLGRDVFPDVATFNNVLHALCQK 224
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V ++ L ++L+ G N CNI ++ E + + A VAL E
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA-------------VALVE- 270
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
+ P+ V TYN LM+ C D
Sbjct: 271 ---------------RMGAYVAPDVV-------------------TYNTLMRGLCKDSKV 296
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A + M G P+ ++ +ID SG ++ A ++LK G PD V Y +
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL------AV 643
I +++A LF E + ++P+LV Y +L++ R G + Q +
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416
Query: 644 YQDMW 648
+ D+W
Sbjct: 417 HPDIW 421
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 24/326 (7%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ E+ K+ G + D +Y L+ C G+ A E++ E + + LK D+
Sbjct: 331 LQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD----LKPDLV 386
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
Y+++VK AL+V +M+ G P+ T++ +IN G + A + +
Sbjct: 387 VYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDGNTDRISNME 483
+ G P+ N L+ + + D A +L R WT + D ++ +
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY-----GIAPDVITYNSVLNGLC 501
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEM 539
K N +F++ +P TYNIL++ C ++ M
Sbjct: 502 KAGKAKEVN----------ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL P+ +S+ LI +G+++GA + + + E G S + I +
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 611
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
+ A +F EM +P+L TY L+
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILV 637
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 13/251 (5%)
Query: 394 VTPNTIT--WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+ P+++ + + I A A AG + A+ FE M C P + N ++ A V A D+
Sbjct: 65 LAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A +++ + + D +T R+ + +T P+ S ++
Sbjct: 125 AHKVY----VRMLAAGVAPDARTHTVRLKSF------CLTGRPHVALRLLRSLSERGCDA 174
Query: 512 KPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
KP + Y + L +EM + P+ ++ ++ A G+V + +L
Sbjct: 175 KPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALL 234
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + GMS + I+ RL++A +L E M Y + P++VTY TL+R +
Sbjct: 235 AKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKD 293
Query: 632 GSLHEVQQCLA 642
+ E Q L
Sbjct: 294 SKVQEAAQYLG 304
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 169/383 (44%), Gaps = 27/383 (7%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+R +++++ L+ YV+ + + +L + M+ GV YN+L+
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C + A E+ + +G++ D TY T+V F + +MAL++ +DMLS
Sbjct: 239 GLCRNNRVLEAVEVKNS---MVERGIVA-DEVTYRTLVYGFCRTEELEMALEMTDDMLSL 294
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ + S +++ G +++A L + + G PN CN L+ + +F A
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFS 510
RLFR + N + + H + + + FD +
Sbjct: 355 ERLFRGMA--------NRGLEPNEVTYAILIH------SLCKRGMMDDALCMFDRMREKG 400
Query: 511 FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ T YN L+ C ++++ + L+NEM GL+P+ S++ LI G++ A+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ + M +G+S +V +TT I + + +A LF++M + PN VT+ ++
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
R G+ V++ +Y M G
Sbjct: 521 CRVGN---VRKAFQLYDQMVDRG 540
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 189/448 (42%), Gaps = 74/448 (16%)
Query: 207 VNLAIRYAC------IVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
++ A R AC +VP ++ CN + + K R A R + PN
Sbjct: 316 IDKAFRLACHLGELGMVP--NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373
Query: 260 RTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVY 312
+I +C M A+ ++ +R + + + +Y +NSL+N N H + L
Sbjct: 374 AILIH--SLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL--- 428
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M + G+ ASY+ L+ C G+ A E++ E+ A+ + +V+T++T++
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM----ARNGVSGNVYTFTTLISG 484
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
F A ++ + M+ + V PN +T++ +I G V +A L+++M+ G P+
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ +RS +S + LG K K+ + +
Sbjct: 545 NYT--------------------YRSL-ISVLCLTLG-------------AMKAKEFVDD 570
Query: 493 TPN--FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS 550
N V N SF TT Y + T+ Y + +EMR G+ + IS
Sbjct: 571 LENNCVVLN----------SFSLTTLMYGFCKEGRLTETYHI---WDEMRARGVKLDLIS 617
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T+++ A + E + + M+E G+ PD V +T I V + + + QA + +++M
Sbjct: 618 FTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PN+VTY L+ + G L Q
Sbjct: 678 ADGCSPNVVTYTVLINHLCKSGYLSSAQ 705
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 181/433 (41%), Gaps = 69/433 (15%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F + F K ++ A R +D PN +I+ G C G+ K+ +Y+
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIE--GYCRVGNVRKAFQLYDQ 535
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL------EVYKNMQKLGVMADMASYNILLKACC 335
+ + +T + Y + SL++V L TL E +++ V+ + S L+ C
Sbjct: 536 MVDRGLTPDNYTYRSLISV----LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFC 591
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G I+ E++ A+GV KLD+ +++ IV + + +M GV
Sbjct: 592 KEGRLTETYHIWDEMR---ARGV-KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVK 647
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + + +I+ + + QA++ +++M+ GC PN +L+ L
Sbjct: 648 PDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLIN------------HL 695
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
+S LS Q+ E G F+PNS
Sbjct: 696 CKSGYLSSAQILCEEMLVG--------------------RFLPNSF-------------- 721
Query: 516 TTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN + + KA +++ G N +++ LI +G ++GA+ +++
Sbjct: 722 -TYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD ++Y+T I + + +AF L+ EM + ++P++V Y L+R + +G
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHG-- 838
Query: 635 HEVQQCLAVYQDM 647
E + L +Y DM
Sbjct: 839 -EFDKGLGIYSDM 850
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 160/398 (40%), Gaps = 57/398 (14%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP ++ F + + + ++ A + YD +P+ Y R++I V + MK+
Sbjct: 506 VVPN-EVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKA 564
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +DL + V LN + +LM L T ++ M+ GV D+ S+ +++ A
Sbjct: 565 KEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYA 624
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ ++I + ++ KGV +VF ++ ++ V + + AL + M++ G
Sbjct: 625 ALKLHD---GEKISVLFREMKEKGVKPDNVF-HTCMIDVHSKEENIVQALNCWDKMIADG 680
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+PN +T++ LIN +G + A L EEML PNS N L
Sbjct: 681 CSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDF----------- 729
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L L K +V +G + NT
Sbjct: 730 -LANEGELEKAKVLHATILEG--------------CLANT-------------------- 754
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N L+K C A LM G P+ IS++ +I+ G++ A Q+
Sbjct: 755 --VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLW 812
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
M G+ PD+VAY I+ C + ++ +M
Sbjct: 813 NEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/429 (18%), Positives = 169/429 (39%), Gaps = 30/429 (6%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
++ + V F + +L AL D P++ C ++D G K+ +
Sbjct: 265 EVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLAC 324
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
L + N++ N+L++ D +F +++ M G+ + +Y IL+ + C G
Sbjct: 325 HLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRG 384
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ + + KG+ ++ V+ Y++++ + + A + +M+ G+ P+
Sbjct: 385 ---MMDDALCMFDRMREKGI-RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++S LI G + AM L EM + G N L+ + D A RLF
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDK 500
Query: 459 W---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKP 513
++ +V +G R+ N+ + +D+ P
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYC-RVGNVRKA----------------FQLYDQMVDRGLTP 543
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ C +KA ++++ + N S T L+ G + I
Sbjct: 544 DNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIW 603
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
MR G+ D++++T + ++ ++ LF EMK ++P+ V + ++ S+
Sbjct: 604 DEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKE 663
Query: 632 GSLHEVQQC 640
++ + C
Sbjct: 664 ENIVQALNC 672
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ ++V AL +D SPN+ +I+ G ++ + E++ N +
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N ++ A++ + LE K + G +A+ ++N L+K C AG +I G
Sbjct: 722 TYNCFLDFLANEGE--LEKAKVLHATILEGCLANTVTFNTLIKGFCKAG------QIQGA 773
Query: 350 VKHLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ ++ + D +YSTI+ A ++ +ML G+ P+ + ++ LI
Sbjct: 774 IDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRW 833
Query: 408 CANAGLVEQAMHLFEEMLQ 426
C G ++ + ++ +M+
Sbjct: 834 CNIHGEFDKGLGIYSDMVN 852
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 20/293 (6%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+ +K+F K ++ A K+ ++ML GV PN IT+S++I+ + L +A+ FE
Sbjct: 181 VILYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFE 240
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M GCEP++ C+ ++ A D A RL+ K V +T S +
Sbjct: 241 MMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHV--------DTAVFSGL 292
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
+ + N+V + + K KP TTYN L+ A KA+ EM
Sbjct: 293 ----IKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMI 348
Query: 541 TVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GLSPN ++ L+ A C N + AL + K M+E G D++ Y +C +
Sbjct: 349 SNGLSPNWPTYAALLQAYCRARFNRD-ALNVYKEMKEKGKDLDILLYNMLFDMCANVGCV 407
Query: 600 KQAFSLFEEMKHYQI-QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A +FE MK P+ TY +L+ S G + E++ A++ +M ++G
Sbjct: 408 DEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGKILEME---AMFNEMMESG 457
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F ++ +G + V L Y+ K + PN+ ++ G ++AIY ++
Sbjct: 288 VFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEM 347
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
S ++ N + +L+ A + L VYK M++ G D+ YN+L C G
Sbjct: 348 ISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCV 407
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVKEDMLSAGVTPNTI 399
A +I+ +H+++ G D FTY++++ +++ K +M E M+ +G PN I
Sbjct: 408 DEAVKIF---EHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNE-MMESGFEPNII 463
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+SL++ A + + +F +++ G P+ + C+ LL A +
Sbjct: 464 VLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQ 509
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR YD +K + + +I + G+ G+Y+ +Y D++ N+ +N+L+
Sbjct: 270 ALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLY 329
Query: 300 V-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
A D K +Y M G+ + +Y LL+A C A A +Y E+K
Sbjct: 330 AMGRAKRARDAK---AIYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKE-- 384
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV-TPNTITWSSLINACANAGL 413
KG LD+ Y+ + + A+ A+K+ E M S+G P++ T++SLIN ++ G
Sbjct: 385 -KGK-DLDILLYNMLFDMCANVGCVDEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGK 442
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ + +F EM+++G EPN L+ +A + D ++F
Sbjct: 443 ILEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIF 485
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 167/414 (40%), Gaps = 64/414 (15%)
Query: 179 EVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRY---ACIVPRADILFCNFVREFGKKR 235
E+L+ V E D F I+ VN LA+ Y R IL+ ++ F K +
Sbjct: 137 EILKVLGDSVLEPDAVF-ILNSMVNPYTALLAVEYFKQKVKSVRHVILYNVTLKLFRKVK 195
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS------QNVTL 289
D A + +D +PN+ T+I +C K+ +E + S NV
Sbjct: 196 DFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFEMMPSFGCEPDNNVCS 255
Query: 290 N-IYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ IY + N + L +Y + D A ++ L+K ++GN V +Y
Sbjct: 256 SMIYAYTRTGNTD-----MALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYN 310
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++K L AK L TY+ ++ AK + A + +M+S G++PN T+++L+ A
Sbjct: 311 DMKVLGAKPNLT----TYNALLYAMGRAKRARDAKAIYGEMISNGLSPNWPTYAALLQAY 366
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
A A+++++EM + G + + N+L C D A ++F
Sbjct: 367 CRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIF------------ 414
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
EH K S T P+ F++ Y+ + K
Sbjct: 415 --------------EHM-KSSGTCPPD------------SFTYASLINMYSSIGKI---- 443
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
++A+ NEM G PN I T L+ G + + ++I + + G+SPD
Sbjct: 444 -LEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPD 496
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 31/382 (8%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + L+S N F +L+ N H+++ L++ +N +LG D YNI L A
Sbjct: 76 TLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNAL 133
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L + ++ ++ + +G++ LDV T++ ++K A + A+ + E+M + G+
Sbjct: 134 VEDNKLKLVEMLHSKMVN---EGIV-LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ IT+++L+ G + A+ + ++ML GC + +L+ + + + A R
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249
Query: 455 LFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ S QV +G RI N+ D I + F F
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFC-RIGNV--NDALDIVD------------FMIEKGF 294
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TYN L+ C ++ + ++ +M SPN +++ LI A +E A
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ +I+ G+ PDV + T I+ SK A +FEEMK+ +P+ TY L+ +
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
L E L + ++M +G
Sbjct: 415 YERRLKEA---LMLLKEMESSG 433
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 202/473 (42%), Gaps = 45/473 (9%)
Query: 197 IVQLCVNKPDVNLAIR-------YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKK 249
++Q + + D+N A++ Y C++ + V F K+ + ALR +
Sbjct: 199 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV--LVNGFCKEGRVEEALRFVLEVSE 256
Query: 250 HLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
SP+ ++++ G C G+ + I + + + ++Y +NSL++ +
Sbjct: 257 EGFSPDQVTFNSLVN--GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+ +E+ + M + +YN L+ A C A ++ + L +KG+L DV T
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL---ARILVSKGLLP-DVCT 370
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++T+++ +K +A+++ E+M + G P+ T+S LI++ +++A+ L +EM
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRIS 480
+GC N+ N L+ ++ + + A +F L S++ V DG R+
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 490
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNE 538
Q I KP TYN L+ C D + ++
Sbjct: 491 EASQLMDQMIME-----------------GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M + G P+ ++ LI +G V+ A ++L+ ++ G+ AY I+ KR
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
K+ LF EM P+ +T+ + R G +Q+ + +M + G
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG--PIQEAIDFTVEMLEKG 644
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 206/465 (44%), Gaps = 67/465 (14%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
AL + K+ +P + ++DV G G + + A+ E++R+ V + + ++++
Sbjct: 206 ALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVI 265
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
D + + +++++ G + + +YN LL+ AGN + A + +K +E
Sbjct: 266 AACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRV---LKEMEES 322
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G K D TY+ + +A A +++ A K + M+S G+ PN T+++++ A NAG V++
Sbjct: 323 GC-KPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDE 381
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVA 467
A+ LF+ M + G P N++L + +F+ + + S T +A
Sbjct: 382 ALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLA 441
Query: 468 L--GEDYDGNTDRI-SNMEHKDKQSITNTPNFVPNSH---------YSSFDKRFS--FKP 513
+ +G R+ M+ + +T N + +++ + +D+ + F P
Sbjct: 442 VCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTP 501
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TTYN L+ D+ ++++N+M+ G PN +S+++L+ GN G I
Sbjct: 502 CLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIE 561
Query: 572 KIMRED-----------------------------------GMSPDVVAYTTAIKVCVRS 596
K + E G PD+V + + + + ++
Sbjct: 562 KEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKN 621
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++A +F+ +K + P+L+TY +++ ++ E ++ L
Sbjct: 622 GMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKIL 666
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 156/386 (40%), Gaps = 56/386 (14%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQK 317
T++ G Y ++ ++ +L+ + V ++N +++V + + + M+
Sbjct: 192 TVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRA 251
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
GV D + + ++ AC G L E + L+++G + V TY+ +++VF A
Sbjct: 252 AGVEPDGFTASTVIAAC---GRDGLVDEAVAFFEDLKSRGHVPC-VVTYNALLQVFGKAG 307
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ AL+V ++M +G P+ +T++ L + A AG E+A + M+ G PN+ N
Sbjct: 308 NYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYN 367
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
++ A A + D A LF W
Sbjct: 368 TIMTAYGNAGKVDEALALF-DWM------------------------------------- 389
Query: 498 PNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILI 555
K+ F P TYN++ M + + + ++ EM G +PN ++W ++
Sbjct: 390 ---------KKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTML 440
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
CG G ++L+ M+ G+ + T I R AF +++EM
Sbjct: 441 AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFT 500
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCL 641
P L TY LL SR G Q +
Sbjct: 501 PCLTTYNALLSVLSRQGDWTAAQSII 526
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 185/452 (40%), Gaps = 68/452 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P+ + T+I CG G ++ A +EDL+S+ + +N+L+ V A + L V
Sbjct: 256 PDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRV 315
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M++ G D +YN L + AG +E + + +KG+L + FTY+TI+
Sbjct: 316 LKEMEESGCKPDAVTYNELAGSYARAG---FYEEAAKCLDTMVSKGILP-NAFTYNTIMT 371
Query: 372 VFADA----------KW-------------------------WQMALKVKEDMLSAGVTP 396
+ +A W + + L++ +M +G TP
Sbjct: 372 AYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTP 431
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N +TW++++ C G+ + E M G E N L+ A AF+++
Sbjct: 432 NRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY 491
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNM-EHKDKQSITN---TPNFVPNSHYSSF------- 505
T + L Y+ +S + QSI N F PN S
Sbjct: 492 DEMTAAGFTPCL-TTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAK 550
Query: 506 ---------DKRFSFKPTTTTYNILMKACCTDYYRVKAL------MNEMRTVGLSPNHIS 550
++ ++ T ++++ ++ + L E+ G P+ +
Sbjct: 551 GGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVI 610
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ++ +G A ++ +++ G+SPD++ Y + + + +S +A + + +K
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
Q++P++V+Y T++ + G + E Q+ L+
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILS 702
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 171/386 (44%), Gaps = 40/386 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN + TI+ G G ++ A+++ ++ + +N ++ + +F LE+
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G + ++N +L C G + + ++ +++ GV +L T++T++
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVC---GKRGMEGYVTRVLERMKSCGV-ELCRDTFNTLIS 476
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M +AG TP T+++L++ + G A + +M G +P
Sbjct: 477 AYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKP 536
Query: 432 NSQCCNILLQ--------ACVEACQFD-RAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
N ++LLQ A +EA + + +F SW + +T V ISN
Sbjct: 537 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLV------------ISNF 584
Query: 483 EHKDKQSITNT-PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
+ + + I + H KP +N ++ + Y + + + +
Sbjct: 585 KCRRLEGIERAFQEVMARGH----------KPDLVIFNSMLSMYAKNGMYRKAGEMFDSI 634
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ GLSP+ I++ ++D S A +ILK ++ + PDVV+Y T + + +
Sbjct: 635 KQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLI 694
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL 625
K+A + EM ++P +VTY TL+
Sbjct: 695 KEAQRILSEMIADGVRPCVVTYHTLV 720
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 51/253 (20%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++++++A ++ G E+A+ LF E+ + G P N++L D R+ RSW
Sbjct: 190 YTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVML---------DVYGRMGRSW- 239
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
VA+ E+ R + +E P T +
Sbjct: 240 --PQIVAMLEEM-----RAAGVE-----------------------------PDGFTAST 263
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ AC D A ++++ G P +++ L+ G +GN AL++LK M E G
Sbjct: 264 VIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESG 323
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD V Y R+ ++A + M I PN TY T++ A YG+ +V
Sbjct: 324 CKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTA---YGNAGKVD 380
Query: 639 QCLAVYQDMWKAG 651
+ LA++ M K G
Sbjct: 381 EALALFDWMKKNG 393
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ I RT++ C ++++ ++ ++ +FNS++++ A + + E+
Sbjct: 571 PSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEM 630
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ ++++ G+ D+ +YN ++ + + A++I +K + LK DV +Y+T++
Sbjct: 631 FDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQ----LKPDVVSYNTVMN 686
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A ++ +M++ GV P +T+ +L+ A+ + +A + M+Q P
Sbjct: 687 GFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSP 746
Query: 432 NSQCCNILLQACVEACQFDRA 452
++ + +A +FD A
Sbjct: 747 MELTYRRVVDSYCKAKRFDEA 767
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
+ P IL + F K R L RA+ P++ I +++ + G Y
Sbjct: 567 GTVFPSWVILRTLVISNF-KCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYR 625
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
K+ +++ ++ ++ ++ +NS+M++ A + + E K +++L + D+ SYN +
Sbjct: 626 KAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNE-SWEAEKILKRLKTSQLKPDVVSYNTV 684
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G AQ I E + A GV + V TY T+V +A + + A +V M+
Sbjct: 685 MNGFCKQGLIKEAQRILSE---MIADGV-RPCVVTYHTLVGGYASREMFSEAREVVSYMI 740
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
++P +T+ ++++ A ++A E+ + + + + L A VE+ QF
Sbjct: 741 QRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLST-LTARVESAQFR 799
Query: 451 R 451
R
Sbjct: 800 R 800
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEV 311
P++ +ID G Y K+ + Y +L T + Y + L+ V
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 263
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLIN 319
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG EP
Sbjct: 320 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 379
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEHK 485
+ N L++A + RA + + + +G + D + I H+
Sbjct: 380 DVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 433
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D Q++ KR PT ++ +L+ A + + ++N+M G
Sbjct: 434 DAQAVFEVM------------KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 481
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 482 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARME 541
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 542 ELFRSLPARNLIPDVVTWTSRIGAYSR---RKQYNRCLEVFEEMIDAG 586
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 25/314 (7%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 153 SNRIWGSLDSLSPNHTTWDDIINVA--VQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 210
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 211 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 270
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ V DG M+ D Q + KR +P+T TY
Sbjct: 271 GFPPSAVVYNAYIDG------LMKGGDTQKAVEIFERM---------KRDRCQPSTATYT 315
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ + Y + +EMR+ PN ++T L++A G E A +I + ++E
Sbjct: 316 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 375
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LHE
Sbjct: 376 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHED 434
Query: 638 QQCLAVYQDMWKAG 651
Q AV++ M + G
Sbjct: 435 AQ--AVFEVMKRLG 446
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 273 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 332
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 333 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 392
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 393 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 448
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 449 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM--- 505
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----YSSFDKRFS 510
+ ++ ME + +T N + N + ++ ++ F
Sbjct: 506 --------------------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Query: 511 FKPT--------TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T T I + Y R + EM G P+ + +L+ AC
Sbjct: 546 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 605
Query: 563 NVEGALQILKIMRED 577
++ +++ M +D
Sbjct: 606 QIQEVTTVIRTMHKD 620
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/509 (20%), Positives = 211/509 (41%), Gaps = 96/509 (18%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
+R G++ AL+ D S ++ C TI+ G Y ++ A++E ++ +
Sbjct: 204 IRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGL 263
Query: 288 TLNIYVFNSLMNVNA---HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ +N +++V L++ M+ G+ D + + ++ AC G A+
Sbjct: 264 SPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAK 323
Query: 345 EIYGEVK-----------------------HLEAKGVLK--------LDVFTYSTIVKVF 373
E + E+K + EA +LK LD TY+ +V +
Sbjct: 324 EFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAY 383
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
A +++ V + M GV PN +T++++INA AG +A+ LF +M ++GC PN
Sbjct: 384 VRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNV 443
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLS---------KTQVALGEDYDGNTDRISNMEH 484
N +L + + + ++ ++ T +A+ D G ++++
Sbjct: 444 CTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGD-KGKHKFVNHVFR 502
Query: 485 KDKQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKACC--T 527
+ K N+ S++ + + F P TTYN L+ A
Sbjct: 503 EMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRG 562
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK------------IMR 575
D+ ++++ +MR G PN S+++++ GNV G +I K ++R
Sbjct: 563 DWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLR 622
Query: 576 -----------------------EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++G PD+V + + + + ++ ++A + + ++
Sbjct: 623 TLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRES 682
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+QP+LVTY +L+ +R G + ++ L
Sbjct: 683 GLQPDLVTYNSLMNMYARRGECWKAEEIL 711
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 172/402 (42%), Gaps = 38/402 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN T+I+ G G +K+ ++ ++ N+ +NS++ + + +++
Sbjct: 406 PNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKI 465
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + ++N LL C G ++ E+K+ + T++T++
Sbjct: 466 LSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCG----FEPGKDTFNTLIS 521
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ ++M+ AG TP T+++L+NA A G + A + +M G +P
Sbjct: 522 AYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKP 581
Query: 432 NSQCCNILLQACVEACQFDRAFRL---------FRSWTLSKTQVALGEDYDGNTDRISNM 482
N +++L + R+ F SW L +T + + + M
Sbjct: 582 NETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILA----NFKCRAVRGM 637
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E ++ + N +KP +N ++ + Y R + +++ +R
Sbjct: 638 ERAFEELMKN-----------------GYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIR 680
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GL P+ +++ L++ G A +ILK + + G SPD+V+Y T IK R ++
Sbjct: 681 ESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQ 740
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+A + EM I P + TY T + + G EV + ++
Sbjct: 741 EAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVIS 782
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + RT+I C +E+L ++ +FNS++++ A + +Y+
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKN-----NMYE 670
Query: 314 NMQKL-------GVMADMASYNILLKACCLAGNTVLAQEIY-GEVKHLEAKGVLKLDVFT 365
QK+ G+ D+ +YN L+ G A+EI G +K E+ D+ +
Sbjct: 671 RAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESP-----DLVS 725
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+TI+K F Q A++V +M + G+ P T+++ ++ A G+ + + M+
Sbjct: 726 YNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMI 785
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRA 452
Q C+PN I++ +A ++ A
Sbjct: 786 QKNCKPNELTYKIIVDGYCKARKYQDA 812
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN 301
RA++ K+ P+M I +++ + Y +++ + + +R + ++ +NSLMN+
Sbjct: 639 RAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMY 698
Query: 302 AH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A + E+ K + K G D+ SYN ++K C G L QE + + +G+
Sbjct: 699 ARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQG---LMQEAIRVMSEMTTRGIC 755
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+FTY+T V +A + +V M+ PN +T+ +++ A + AM
Sbjct: 756 PC-IFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMD 814
Query: 420 L 420
Sbjct: 815 F 815
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ + A + YD K +P +++ GD+ + ++ D+R
Sbjct: 516 FNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMR 575
Query: 284 SQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ N F+ +++ A +++ + K++ + +LL+ LA
Sbjct: 576 NKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSW----VLLRTLILANFKC 631
Query: 342 LAQEIYGEVKHLEA--KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A + G + E K K D+ +++++ +FA ++ A K+ + + +G+ P+ +
Sbjct: 632 RA--VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+N A G +A + + ++++G P+ N +++ A R+
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 460 T 460
T
Sbjct: 750 T 750
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++I G AL++L + D S DV A TT + R+ + KQA ++FE MK
Sbjct: 202 LMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDC 261
Query: 613 QIQPNLVTYITLLRARSRYG 632
+ P+LVTY +L + G
Sbjct: 262 GLSPSLVTYNVMLDVYGKMG 281
>gi|384253709|gb|EIE27183.1| hypothetical protein COCSUDRAFT_38919 [Coccomyxa subellipsoidea
C-169]
Length = 675
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 158/397 (39%), Gaps = 78/397 (19%)
Query: 279 YEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
++++RS+ + + + N L+N + DL +Y + G+ ++N LLKAC
Sbjct: 192 FQEMRSRCIWSPQDTHTVNILLNALSSDLPAAFAMYNELMAGGLEPTRVTFNTLLKACMR 251
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
N A E+ ++ +G + TY+T +K + + + ALKV M + G P
Sbjct: 252 GQNAARADEVLAWMRERGCQG----NEHTYNTYIKAASYSGDVERALKVLPQMAADGCAP 307
Query: 397 NTITWSSLINACAN-----------AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
W SLI AC A VE A+ L+ +M +G P CN LL AC++
Sbjct: 308 TPAVWGSLIVACGKSPKVAPQPFGMARQVESALGLWRQMAASGTTPTVDNCNALLTACID 367
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
Q +RA ++RS
Sbjct: 368 CDQGERALDIYRSM---------------------------------------------- 381
Query: 506 DKRFSFKPTTTTYNILMKAC---------CTDYYRVKALMNEMRTVGLSPNHISWTILID 556
K +P TYN+ ++AC + L+ +MR G++P+ + T ++
Sbjct: 382 -KDLGVEPDLVTYNLAVRACGGQSGSKLRSAQLDQAFQLLADMRAAGVAPDQQTVTSMLA 440
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQI 614
C +G AL + + +++ G+ DV + I + A ++F +M ++
Sbjct: 441 LCAQAGAGRRALALYEEVKDSGIRIDVALQSALIAALGSEGLAEDALAVFRKMVWGPRRM 500
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+PN TY + R G V++ L Y+ M + G
Sbjct: 501 KPNEHTYRLVTRICREAGL---VKEALHAYRGMRRMG 534
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 15/234 (6%)
Query: 229 REFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVT 288
+ FG R + SAL + ++P + C ++ C C ++ IY ++ V
Sbjct: 328 QPFGMARQVESALGLWRQMAASGTTPTVDNCNALLTACIDCDQGERALDIYRSMKDLGVE 387
Query: 289 LNIYVFN---------SLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +N S + + L ++ +M+ GV D + +L C AG
Sbjct: 388 PDLVTYNLAVRACGGQSGSKLRSAQLDQAFQLLADMRAAGVAPDQQTVTSMLALCAQAGA 447
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--VTPN 397
A +Y EVK +++DV S ++ + AL V M+ + PN
Sbjct: 448 GRRALALYEEVK----DSGIRIDVALQSALIAALGSEGLAEDALAVFRKMVWGPRRMKPN 503
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
T+ + C AGLV++A+H + M + G P++ ++ A VEA ++
Sbjct: 504 EHTYRLVTRICREAGLVKEALHAYRGMRRMGFRPSNAEWREMISAAVEAAMAEK 557
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 162/427 (37%), Gaps = 79/427 (18%)
Query: 227 FVREFGKKRDLVSALRAYDASKKH--LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
+R + + R ALRA+ + S + + +++ + D + A+Y +L +
Sbjct: 175 LLRNYSRMRAPAFALRAFQEMRSRCIWSPQDTHTVNILLNA--LSSDLPAAFAMYNELMA 232
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ FN+L+ + + EV M++ G + +YN +KA +G+
Sbjct: 233 GGLEPTRVTFNTLLKACMRGQNAARADEVLAWMRERGCQGNEHTYNTYIKAASYSGDVER 292
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIV----------KVFADAKWWQMALKVKEDMLSA 392
A ++ + + A G S IV + F A+ + AL + M ++
Sbjct: 293 ALKV---LPQMAADGCAPTPAVWGSLIVACGKSPKVAPQPFGMARQVESALGLWRQMAAS 349
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-------VE 445
G TP ++L+ AC + E+A+ ++ M G EP+ N+ ++AC +
Sbjct: 350 GTTPTVDNCNALLTACIDCDQGERALDIYRSMKDLGVEPDLVTYNLAVRACGGQSGSKLR 409
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ Q D+AF+L D + D+Q++T+
Sbjct: 410 SAQLDQAFQLL-------------------ADMRAAGVAPDQQTVTS------------- 437
Query: 506 DKRFSFKPTTTTYNILMKACCTDY---YRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
M A C R AL E++ G+ + + LI A G G
Sbjct: 438 ----------------MLALCAQAGAGRRALALYEEVKDSGIRIDVALQSALIAALGSEG 481
Query: 563 NVEGALQILKIM--REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
E AL + + M M P+ Y ++C + +K+A + M+ +P+
Sbjct: 482 LAEDALAVFRKMVWGPRRMKPNEHTYRLVTRICREAGLVKEALHAYRGMRRMGFRPSNAE 541
Query: 621 YITLLRA 627
+ ++ A
Sbjct: 542 WREMISA 548
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 172/377 (45%), Gaps = 28/377 (7%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C GD M ++ ++ + + N + ++ LMN + +
Sbjct: 190 SPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQ 249
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+NM + G++ + +YN L+ C G A +++ E++ KG+ V TY+ ++
Sbjct: 250 MYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE---KGI-ACGVMTYNILI 305
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + A+K+ + G++PN +T++ LIN + G ++ A+ LF ++ +G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDK 487
P N L+ + A L + +++++V Y D + + + DK
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT----YTILIDAFARLNYTDK 421
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG---L 544
S ++ P TY++L+ C + +K +++G L
Sbjct: 422 A-----------CEMHSLMEKSGLVPDVYTYSVLIHGXCVN-GNMKEASKPFKSLGEMHL 469
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN + + +I G+ AL++L M GM P+V ++ + + + R ++ K+A
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAEL 529
Query: 605 LFEEMKHYQIQPNLVTY 621
L +M + ++P++ Y
Sbjct: 530 LLGQMINSGLKPSVSLY 546
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 37/372 (9%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK---NMQKLGVMADMASYNIL 330
K+ I+ L+S+ V LN Y F +M + + + V++ +++ G+ ++ Y L
Sbjct: 142 KAWWIFNVLKSK-VVLNAYSF-GIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTL 199
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ CC G+ +LA+ ++ ++ L L + TYS ++ F + ++ E+M
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLG----LVPNQHTYSVLMNGFFKQGLQREGFQMYENMN 255
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+G+ PN ++ LI+ N G+V++A +F EM + G NIL+ +F
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 451 RAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +L LS V +G D + M+ T + N SS
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCD-VGKMD---------TAVRLFNQLKSS--- 362
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGS 561
PT TYN L+ Y +V+ L+ EM ++ + +++TILIDA
Sbjct: 363 --GLSPTLVTYNTLIAG----YSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARL 416
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ A ++ +M + G+ PDV Y+ I + +K+A F+ + +QPN V Y
Sbjct: 417 NYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIY 476
Query: 622 ITLLRARSRYGS 633
T++ + GS
Sbjct: 477 NTMIHGYCKEGS 488
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 26/290 (8%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y IV + + AL M+ G P + T+++L+ + ++A +F +L
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN-VL 150
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNTDRISNM 482
++ N+ I++ C EA F R FRL + LS V DG M
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK--------------------PTTTTYNILM 522
K+ + VPN H S FK P YN L+
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270
Query: 523 KACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D KA + EMR G++ +++ ILI A++++ + + G+S
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
P++V Y I ++ A LF ++K + P LVTY TL+ S+
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
H Q++T + + H P + T+N L+ Y KA + N +++
Sbjct: 103 HSTDQALTFLHHMIHEGH----------APLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS 152
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
+ N S+ I+I C +G ++L ++ E G+SP+VV YTT I C ++ +
Sbjct: 153 -KVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A +LF +M + PN TY L+ + G E Q +Y++M ++G
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQ---MYENMNRSG 258
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 78/372 (20%)
Query: 292 YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-- 349
+V ++L+ N ++ VY++M++ G ++ +YN+LLKA C A+++ E
Sbjct: 150 HVLDTLLGEN--RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 207
Query: 350 --------------VKHLEAKGVLKLD----------VFTYSTIVKVFADAKWWQMALKV 385
+ + G++K V Y+ ++ + ++ +++
Sbjct: 208 NKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVEL 267
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC-V 444
+M+ G++PN I++S+LIN +N+G +E A L +ML+ GC PN + L++ C V
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
FD AL ++
Sbjct: 328 RGTTFD----------------AL-------------------------------DMWNQ 340
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
+ F +P YN L++ C+ + + ++ M +G SPN ++ LI+ G
Sbjct: 341 MIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRG 400
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
++EGA+ I M G P+VV YT+ ++ R + K+A SL E M P++ T+
Sbjct: 401 SLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 460
Query: 623 TLLRARSRYGSL 634
++ G L
Sbjct: 461 AFIKGLCDAGRL 472
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 39/386 (10%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + ++ + ++ N+ +++L+N N+ ++ + M K G
Sbjct: 254 GLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHP 313
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C + G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 314 NIHTLSSLVKGCFVRGTTFDALDMWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIDKA 370
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN G +E A++++ +ML +GC PN +++A
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 431 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRC 488
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +T+TYN L+ C AL
Sbjct: 489 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQ 548
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A+Q+L ++ PDV++YT I
Sbjct: 549 LVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWG 608
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNL 618
RS + LFE M +I P L
Sbjct: 609 LCRSNCREDGVILFERMISERIIPIL 634
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 160/413 (38%), Gaps = 48/413 (11%)
Query: 273 MKSRAIYEDLRSQN-VTLNIYVFNSLMNVNA-HDLKFTLEVYKNMQKLGVMADMASYNIL 330
+K A+ + LR ++ V L ++ F S+ N N T EV ++KL + + S L
Sbjct: 40 IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVM--IRKLAMDGQVDSVQYL 97
Query: 331 LKACCLAG----------------NTVLAQ---EIYGEVKHLEAKGVLKLDVFTYSTIVK 371
L+ L G LA+ E++ +K +K+ Y+ ++
Sbjct: 98 LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKI----YNHVLD 153
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
QM V DM G PN T++ L+ A V+ A L EM GC P
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213
Query: 432 NSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALG----EDYDGNTDRISNMEH 484
N+ ++ + E +L F + G DY G + +S M
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVK 533
K + + + N +S +F P T + L+K C
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333
Query: 534 AL--MNEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
AL N+M R GL PN +++ L+ GN++ A+ + M E G SP++ Y + I
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ L+ A ++ +M PN+V Y +++ A R+ E + + +
Sbjct: 394 NGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEI 446
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 11/198 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ T++ G C G+ K+ +++ + + NI + SL+N L+ +
Sbjct: 349 PNVVAYNTLVQ--GFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 407 YIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 462
Query: 370 VKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522
Query: 429 CEPNSQCCNILLQACVEA 446
E ++ N LL A
Sbjct: 523 VEWSTSTYNTLLHGSCNA 540
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 142/325 (43%), Gaps = 28/325 (8%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ G+M + +YN ++ +G AQ + E++ A G+L DV TY++++ +
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR---AMGLLP-DVITYNSLLNGYC 1271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + AL + D+ AG+ P +T++ LI+ G +E+A L EEM + GC PN
Sbjct: 1272 KAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVC 1331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
IL++ + A R F LSK L D RI
Sbjct: 1332 TYTILMKGSLNVRSLAMA-REFFDEMLSK---GLQPDCFAYNTRI-------------CA 1374
Query: 495 NFVPNSHYSSFDKR-----FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPN 547
+ +F+ R T TYNIL+ C + K L +M + GL P+
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++T LI A G + A +I M DG+ P V +T I R L A+ F
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
+M ++PN +TY L+ A R G
Sbjct: 1495 KMLEEGVEPNEITYNVLIHALCRMG 1519
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 30/368 (8%)
Query: 281 DLRSQNVTLNIYVFNSLMN-------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++ ++ + + +N++++ V A +KF M+ +G++ D+ +YN LL
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA-----EMRAMGLLPDVITYNSLLNG 1269
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C AGN A ++G+++ + L V TY+ ++ + + A +KE+M G
Sbjct: 1270 YCKAGNLKEALLLFGDLR----RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
PN T++ L+ N + A F+EML G +P+ N + A + RAF
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAF 1385
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L +V + E +T + + H + T N +P
Sbjct: 1386 EL--------REVLMLEGISSDTVTYNILIH----GLCKTGNLKDAKELQMKMVSNGLQP 1433
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY L+ A C + + N M + GL P+ +++T++I A GN+ A
Sbjct: 1434 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 1493
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M E+G+ P+ + Y I R R + A F EM + N TY L+ +
Sbjct: 1494 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 1553
Query: 632 GSLHEVQQ 639
G+ + +
Sbjct: 1554 GNWEDAMR 1561
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 48/279 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + +++V DA W V E+ML G+ P+ +T+++L+++ G ++ L
Sbjct: 1083 DVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 1142
Query: 422 EEM--LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+EM +GC PN N+++ + A L LSK +
Sbjct: 1143 KEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS------------ 1190
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
F++ P T +L + C Y ++ EM
Sbjct: 1191 -----------------------------FTYNPLIT--GLLARGCVKKVYDLQL---EM 1216
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P +++ +I SG VE A MR G+ PDV+ Y + + ++ L
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 1276
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
K+A LF +++ + P ++TY L+ R G L E +
Sbjct: 1277 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 1315
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 59/376 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + + + K +L AL + ++ +P + +ID G C GD ++R +
Sbjct: 1261 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID--GYCRLGDLEEARILK 1318
Query: 280 EDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ Q N+ + LM ++N L E + M G+ D +YN + A +
Sbjct: 1319 EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G+ A E+ EV LE + D TY+ ++ + A +++ M+S G+ P+
Sbjct: 1379 GDIARAFELR-EVLMLEG---ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
IT++ LI+A GL+ +A +F M+ G P++ +++ A A+ FR
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L E +P T
Sbjct: 1495 K--------MLEE---------------------------------------GVEPNEIT 1507
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ A C +EM GL N ++T+LID GN E A++ M
Sbjct: 1508 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567
Query: 576 EDGMSPDVVAYTTAIK 591
++G+ PD + + +K
Sbjct: 1568 QNGIHPDYLTHKALLK 1583
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 171/384 (44%), Gaps = 32/384 (8%)
Query: 274 KSRAIYED---LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
K R YE LRS+ T++I N+L+ V ++ +Y+ + + GV ++ + N
Sbjct: 170 KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLN 229
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
I++ A C G EV+ KGV D+ TY+T++ ++ + A ++
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQE---KGVYP-DIVTYNTLISAYSSQGLMEEAFELMHA 285
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC-NILLQACV--E 445
M S G +P T++++IN G E+A +F EML++G P+S ++L++AC +
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A + + F RS + V S+M T + N Y +
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCF-----------SSM----MSLFTRSGNLDKALMYFNS 390
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
K P Y IL++ C +A L NEM G + + +++ ++
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 450
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M E G+ PD T I + L+ A LF++MK +I+ ++VTY T
Sbjct: 451 LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT 510
Query: 624 LLRARSRYGSLHEVQQCLAVYQDM 647
LL +G + ++ ++ DM
Sbjct: 511 LLDG---FGKVGDIDTAKEIWADM 531
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 178/405 (43%), Gaps = 60/405 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP+ R+++ GD +++ I+ D+RS++V ++ F+S+M++ + +L L
Sbjct: 327 SPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++++ G++ D Y IL++ C G A + E+ +G +DV TY+TI+
Sbjct: 387 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ---QGC-AMDVVTYNTIL 442
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A K+ +M G+ P++ T + LI+ G ++ AM LF++M + +
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N LL + D A + W ++M K+
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEI---W--------------------ADMVSKE---- 535
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
PT +++IL+ A C+ + +A + +EM + + P
Sbjct: 536 --------------------ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +I SGN L+ M +G PD ++Y T I V+ + + +AF L ++
Sbjct: 576 MICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKK 635
Query: 609 MKHYQ--IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ Q + P++ TY ++L R + E + AV + M + G
Sbjct: 636 MEEKQGGLVPDVFTYNSILHGFCRENQMKEAE---AVLRKMIERG 677
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 174/415 (41%), Gaps = 62/415 (14%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R +VP + F + + F + +L AL +++ K+ P+ I +I G C
Sbjct: 356 MRSRDVVPDL-VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCR 412
Query: 271 DYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
M S A + ++ Q +++ +N++++ L +++ M + G+ D +
Sbjct: 413 KGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT 472
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
IL+ C GN A E++ ++K +KLDV TY+T++ F A ++
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKR----IKLDVVTYNTLLDGFGKVGDIDTAKEIW 528
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
DM+S + P I++S L+NA + G + +A +++EM+ +P CN +++
Sbjct: 529 ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG---Y 585
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
C RS S ++ L ++ I+
Sbjct: 586 C---------RSGNASDGEIFL------------------EKMISE-------------- 604
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM--RTVGLSPNHISWTILIDACGGSG 562
F P +YN L+ + KA L+ +M + GL P+ ++ ++
Sbjct: 605 ---GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A +L+ M E G++PD YT+ I V L +AF +EM P+
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 231 FGKKRDLVSA--LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQN 286
FGK D+ +A + A SK+ L +P I +I+ V +C G ++ +++++ S++
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTP---ISFSIL-VNALCSKGHLSEAFRVWDEMISKS 570
Query: 287 VTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + NS++ + NA D + LE M G + D SYN L+ N
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLE---KMISEGFVPDCISYNTLIYGFVKEENMS 627
Query: 342 LAQEIYGEVKHLEAK-GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +G VK +E K G L DVFTY++I+ F + A V M+ GV P+ T
Sbjct: 628 KA---FGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++SLIN + + +A +EMLQ G P+ +
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ E+ G+ N + I+++A G +E L ++E G+ PD+V Y T I
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+++AF L M P + TY T++ ++G ++ V+ +M ++G
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKE---VFAEMLRSG 325
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 139/343 (40%), Gaps = 53/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K Y+ + + G A + +NIL+ C G+ LAQ ++ + K L+ V
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAI----TKWGLRPSVV 178
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ + ++K ML++GV P+ T+S LIN ++ A LF+EM
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + + D A ++
Sbjct: 239 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY---------------------------- 270
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ S P TYN L+ C D + L++EM
Sbjct: 271 --KQMLSQ-----------------SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G+++ A + K M ++ + D VAYT I + R A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ EM ++P+ TY ++ + G + + + L Q
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 33/379 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DI +F + + + L A+ Y +++H + CR +++ +
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWG 128
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++ ++Y FN LM+ D++ V+ + K G+ + SYN L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ ++ML G+
Sbjct: 189 RLGDL---DEGFRLKSAMLASGV-QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G V+ AM ++++ML P+ N L+ + +A L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 456 FRSWT---LSKTQVALGEDYDG---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ L ++ DG D S EH+ + N
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN----------------- 347
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ Y L+ C + V A ++ EM +VGL P+ ++T++I+ G+V
Sbjct: 348 -IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 568 LQILKIMREDGMSPDVVAY 586
++LK M+ DG P VV Y
Sbjct: 407 SKLLKEMQRDGHVPSVVTY 425
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K++++ E++L G + ++ L++ G + A +F+ + + G P+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSY 180
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ + D FRL + S Q
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------- 209
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
P TY++L+ C + A L +EM GL PN +++T L
Sbjct: 210 ----------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G V+ A++I K M +SPD++ Y T I + LKQA L +EM +
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 615 QPNLVTYITLLRARSRYGSL 634
+P+ +TY TL+ + G L
Sbjct: 314 KPDKITYTTLIDGCCKEGDL 333
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ID G C G + IY+ + SQ+++ ++ +N+L+ DLK
Sbjct: 245 PNGVTFTTLID--GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D +Y L+ CC G+ A E K + + + +LD Y+ +
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFE---HRKRMIQENI-RLDEVAYTAL 358
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ +MLS G+ P+ T++ +IN G V + L +EM + G
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGH 418
Query: 430 EPNSQCCNILLQA 442
P+ N+L+
Sbjct: 419 VPSVVTYNVLMNG 431
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 196/435 (45%), Gaps = 63/435 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDA-SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G++ + AL Y+ + +H +PN + TI+ V G + I+
Sbjct: 183 FCFVVKWVGQQ-NWQRALELYECLNLRHWYAPNARMVATILGVLGKANQEALAVEIFARA 241
Query: 283 RSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAG-- 338
S +V + V+N++M V A + +F+ E+ M++ G + D+ S+N L+ A +G
Sbjct: 242 ES-SVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAM 300
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
LA ++ EV+ + ++ D+ TY+T++ + + A+ V DM S P+
Sbjct: 301 EPNLALQLLNEVR----RSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDL 356
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T++++I+ +A LF+E+ G P++ N LL A F R
Sbjct: 357 WTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYA------FSR------- 403
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+GNT+++ ++ KR F TY
Sbjct: 404 --------------EGNTEKVRDI-------------------CEEMVKR-GFGQDEMTY 429
Query: 519 N--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N I M + + + +M++ G +P+ +++T+LID+ G + VE A ++ M +
Sbjct: 430 NTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLD 489
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G+ P + Y+ I ++ + ++A F M+ I+P+ + Y +L R+ +E
Sbjct: 490 AGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRF---NE 546
Query: 637 VQQCLAVYQDMWKAG 651
+++ + +Y +M + G
Sbjct: 547 MKKAMGLYHEMIREG 561
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 161/385 (41%), Gaps = 71/385 (18%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLEVYKNMQKLGVMADMA 325
G + K + + + +R + ++ FN+L+N A + L++ +++ G+ D+
Sbjct: 263 GRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDII 322
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ AC N A ++ +++ + D++TY+ ++ V+ + A ++
Sbjct: 323 TYNTLISACSRESNLEEAVAVFSDMESHRCQP----DLWTYNAMISVYGRCARARKAEEL 378
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++ S G P+ +T++SL+ A + G E+ + EEM++ G + N ++ +
Sbjct: 379 FKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGK 438
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
+ D+A +++R D +S P+ V
Sbjct: 439 QGRHDQAMQIYR----------------------------DMKSSGRNPDAV-------- 462
Query: 506 DKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
TY +L+ + + +M+EM G+ P +++ LI A +G
Sbjct: 463 -----------TYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGK 511
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
E A + MR G+ PD +AY+ + +R +K+A L+ EM P+
Sbjct: 512 REEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPD------ 565
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMW 648
L+EV V ++MW
Sbjct: 566 --------NGLYEVMMHALVRENMW 582
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 7/241 (2%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R DI+ N + ++ +L A+ + + H P+++ +I V G C K+
Sbjct: 318 RPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEE 377
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++++L S+ + +NSL+ + + + ++ + M K G D +YN ++
Sbjct: 378 LFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYG 437
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +IY ++K D TY+ ++ A + A V +ML AGV
Sbjct: 438 KQGRHDQAMQIYRDMK----SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVK 493
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P T+S+LI A A AG E+A F M ++G +P+ +++L + + +A L
Sbjct: 494 PTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGL 553
Query: 456 F 456
+
Sbjct: 554 Y 554
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 133/321 (41%), Gaps = 18/321 (5%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYST 368
+++ +M+ GV + Y ++ C L + + + H E G+ L D+ Y
Sbjct: 723 QIFSDMRFNGVESSECLYQGMVSVYC---RMDLPETAHHLLYHAEKNGIILDNDISVYID 779
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
IV+ + K WQ A + + + W++LI+A A +G E+A +F M++ G
Sbjct: 780 IVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDG 839
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P N LLQA + DR L++ V + E D + +
Sbjct: 840 PSPTVDSVNGLLQALI----VDR--------RLNELYVVIQELQDMGLKISKSSILLTLE 887
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N + K + PT Y I+++ C V+ ++ EM G P
Sbjct: 888 AFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQP 947
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ G + + I + +++ + PD Y T I + R +R ++ FSL
Sbjct: 948 DLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Query: 607 EEMKHYQIQPNLVTYITLLRA 627
+M+ ++P L TY +L+ A
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITA 1028
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 162/426 (38%), Gaps = 59/426 (13%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLG 319
I++ G + K+ ++ LR + ++ V+N+L++ A + ++ M + G
Sbjct: 780 IVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDG 839
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ S N LL+A + E+Y ++ L+ G LK+ + ++ FA A
Sbjct: 840 PSPTVDSVNGLLQALIVDRRL---NELYVVIQELQDMG-LKISKSSILLTLEAFAQAGNL 895
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
K+ M +AG P + ++ V + EM +AG +P+ Q CN +
Sbjct: 896 FEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSI 955
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
L+ + F +++ K Q A + + + + M +D++ P
Sbjct: 956 LKLYLGIEDFKSMGIIYQ-----KIQDASLKPDEETYNTLIIMYCRDRR---------PE 1001
Query: 500 SHYSSFDKRFSF--KPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
+S +K S +P TY L+ A Y + + L E+R+ G + + +++
Sbjct: 1002 EGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMM 1061
Query: 556 DACGGSGNVEGALQILKIMREDGMSP---------------------------------- 581
SG+ A +L IM+E G+ P
Sbjct: 1062 KTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVV 1121
Query: 582 -DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
D + Y++ I ++ K EMK I+P+ + +RA + +E
Sbjct: 1122 LDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVL 1181
Query: 641 LAVYQD 646
L QD
Sbjct: 1182 LNALQD 1187
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + R++I Y ++ ++E+LRS L+ ++ +M + D + +
Sbjct: 1017 PKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENL 1076
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ +++ ++L+ + +G A+ + +K+L GV+ LD YS+++
Sbjct: 1077 LAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENV---LKNLRTTGVV-LDTLPYSSVID 1132
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ ++ ++ +M AG+ P+ W+ I A + +A+ L + AG
Sbjct: 1133 AYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAG 1189
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + ++L+ +R + W LI A SG E A I M DG SP V +
Sbjct: 790 WQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNG 849
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
++ + +RL + + + +E++ ++ + + + L A ++ G+L EVQ+ +Y M
Sbjct: 850 LLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQK---IYNGMK 906
Query: 649 KAG 651
AG
Sbjct: 907 AAG 909
>gi|110288709|gb|ABG65945.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110288711|gb|ABG65946.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 614
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 107 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 160
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 161 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 221 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 277
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 278 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 336
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 337 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 396
Query: 620 TYITLLRA 627
L+ A
Sbjct: 397 MMNALITA 404
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 50 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 109
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 110 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 169
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 170 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 229
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 230 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 290 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 350 DARAKGYQVG-----------------------------------------------TIA 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 363 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 423 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 474
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 104 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 163
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 164 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 203
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 63 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 118
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 119 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 172
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 173 -----------------------------------------IEPNVNTYSALIDGCAKAG 191
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 192 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 251
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 252 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFA-- 309
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 310 -LKIYEDMNKIG 320
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 273 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 327 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 386
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 387 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 442
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 443 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 499
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 26/273 (9%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L+L+V Y+ ++++ A+ W + + M + G+ T+ +LI+ + GL E A+
Sbjct: 153 LELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVATNSTYGTLIDVYSKGGLREDAL 212
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
E ML+ G EP+ I++Q +A +F +A FR W+L G R
Sbjct: 213 FWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWSL------------GEPLR 260
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALM 536
SN + + + P V + +S+ SF + TYN L+ +
Sbjct: 261 PSN------KHMMDAPESVERALFSN----ASF--GSHTYNTLIDTYGKAGQHKEASETF 308
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M G+ P +++ +I CG G +E +L+ M E SPD Y T I + +
Sbjct: 309 AKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKH 368
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ A F+ MK ++P+ V+Y TLL A S
Sbjct: 369 NDIDMATKYFKRMKESYLEPDPVSYRTLLYAYS 401
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 165/387 (42%), Gaps = 33/387 (8%)
Query: 286 NVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N + + +N+L++ A K E + M K G+ ++N ++ C GN
Sbjct: 280 NASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHIC---GNHGRL 336
Query: 344 QEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+E+ ++ + G L+ D TY+T++ + MA K + M + + P+ +++
Sbjct: 337 EEVSSLLRKM---GELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSY 393
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF----RLFR 457
+L+ A + +V +A L EM + G E + + L + +EA +R+ R R
Sbjct: 394 RTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEAGMPERSLLWFQRFHR 453
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEH-----KDKQSITNTPNFVPNSHYS---SFDK-- 507
+ ++ A D G IS E +++++++ V Y +DK
Sbjct: 454 AGNMTSECYAANIDAYGERGHISEAEKVFLWCQERKNLSAVEFNVMIKAYGVGKYYDKAC 513
Query: 508 -------RFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
+ +Y+ L++ A + K + M+ GL N I + +I
Sbjct: 514 QLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCF 573
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G +E A + K M G+ PD++ Y I + R+K+A S E+K + N
Sbjct: 574 VKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNT 633
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQ 645
V Y +L++ ++ G+L E Q+ + Q
Sbjct: 634 VIYNSLIKLYTKVGNLREAQETYRLLQ 660
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 25/270 (9%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ +M K GV AD SY+ L++ A +A+ +K ++ G++ + Y +
Sbjct: 514 QLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPY---LKRMQVAGLVT-NCIPYCAV 569
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F +MA V ++M+ GV P+ I + LINA AG V++A+ E+ +AG
Sbjct: 570 ISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGL 629
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN-----TDRISNMEH 484
N+ N L++ + A +R S+ A+ Y N + S +E
Sbjct: 630 PGNTVIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAV---YSSNCMIGLYTKQSMVEQ 686
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGL 544
+ T N N FSF Y + + + + N+MR + L
Sbjct: 687 AKEIFETLKKNGTAN--------EFSFAMMLCLYKNIER-----FDVAIQIANQMRKLEL 733
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIM 574
+ +S+ I++D +G + A++I K M
Sbjct: 734 LTDSLSYNIVLDLYATAGRPKEAIEIFKDM 763
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 43/270 (15%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +YS++++V A A +A + M AG+ N I + ++I+ G +E A ++
Sbjct: 527 DRCSYSSLIQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVY 586
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+EM+ G +P+ +L+ A A + A S+ + L GNT
Sbjct: 587 KEMIGHGVKPDIIVYGVLINALYGAGRVKEAI----SYANEIKRAGL----PGNT----- 633
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA----------CCTDYYR 531
+ NS + K + + TY +L + C Y
Sbjct: 634 --------------VIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAVYSSNCMIGLYT 679
Query: 532 VKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
++++ + + + + N S+ +++ + A+QI MR+ + D ++
Sbjct: 680 KQSMVEQAKEIFETLKKNGTANEFSFAMMLCLYKNIERFDVAIQIANQMRKLELLTDSLS 739
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
Y + + + R K+A +F++M IQ
Sbjct: 740 YNIVLDLYATAGRPKEAIEIFKDMVTASIQ 769
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH-DLKFTLEVY-KNMQKLG 319
+I G+ Y K+ +++ + V + ++SL+ V A D + Y K MQ G
Sbjct: 499 MIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRMQVAG 558
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
++ + Y ++ G +A+ +Y K + GV K D+ Y ++ A
Sbjct: 559 LVTNCIPYCAVISCFVKLGQLEMAEGVY---KEMIGHGV-KPDIIVYGVLINALYGAGRV 614
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-PNSQCCNI 438
+ A+ ++ AG+ NT+ ++SLI G + +A + +LQ+ E P N
Sbjct: 615 KEAISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQETY-RLLQSSEEGPAVYSSNC 673
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVA 467
++ + ++A +F TL K A
Sbjct: 674 MIGLYTKQSMVEQAKEIFE--TLKKNGTA 700
>gi|387191507|gb|AFJ68617.1| pentatricopeptide repeat-containing protein, partial
[Nannochloropsis gaditana CCMP526]
Length = 646
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 148/335 (44%), Gaps = 39/335 (11%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G++ D+ SYN LL A L QE + ++ L +G D T++TI+K A
Sbjct: 236 GIVLDVKSYNALLPAVLAEAPPFLQQEAVETFLRDLSRRG-FAPDRVTFNTILKHHASMG 294
Query: 378 WWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ-AGCEPNSQC 435
+AL+ M AG+ P+ ++++++I AC + AM + + Q +G E +++
Sbjct: 295 KEALALETLRMMKDQAGIVPDVVSFTTVITACGRD--WDGAMRVLAQAEQESGVEKDARM 352
Query: 436 CNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
++ C A + LF R + TQ E G +R E
Sbjct: 353 YTAAMRVCANAGRRREVLELFERMKAMQATQ----EKRKGGKERKGEGE----------- 397
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
S + R S YN +++A TD +AL + EMR VGL PN ++
Sbjct: 398 ---------SEEDRLSV---LIAYNAVLEALKTDKEWRQALQVLQEMRRVGLVPNVVNHN 445
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++DA +G AL +LK M+ + D YT AIK ++S + Q LFEEM
Sbjct: 446 TVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSADVLQGRELFEEMCAA 505
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
I P+ VTY TL+ YG +Q + Q M
Sbjct: 506 GITPDAVTYTTLMEL---YGQAGNKEQMEELVQQM 537
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T++D G+ ++ A+ + ++ V + + + + + + D+ E+
Sbjct: 439 PNVVNHNTVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSADVLQGREL 498
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G+ D +Y L++ AGN +E+ V+ + K DV ++ +++
Sbjct: 499 FEEMCAAGITPDAVTYTTLMELYGQAGNKEQMEEL---VQQMSRKRGFPRDVRAFTAVIR 555
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A W+ AL++ M + V P +++ + + A A +G +A L E M + G EP
Sbjct: 556 AYGRAGLWREALELLGTMKARNVKPTVVSYGTAMAALAASGRHVEAFELLEAMKREGVEP 615
Query: 432 NSQCCNILLQACVEACQFDRAFRL 455
N +AC A + D+ +L
Sbjct: 616 NQVVLEWATEACRTAGRLDKVVQL 639
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 141/355 (39%), Gaps = 68/355 (19%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ ++ F +++ D + V Q+ GV D Y ++ C AG
Sbjct: 311 GIVPDVVSFTTVITACGRDWDGAMRVLAQAEQESGVEKDARMYTAAMRVCANAGRRREVL 370
Query: 345 EIYGEVKHLEA-------------KGVLKLD----VFTYSTIVKVFADAKWWQMALKVKE 387
E++ +K ++A +G + D + Y+ +++ K W+ AL+V +
Sbjct: 371 ELFERMKAMQATQEKRKGGKERKGEGESEEDRLSVLIAYNAVLEALKTDKEWRQALQVLQ 430
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN + +++++A A AG +A+ L ++M + + + ++A +++
Sbjct: 431 EMRRVGLVPNVVNHNTVMDAIAEAGEAGEALALLKQMKVSRVPADKRTYTAAIKAMIKSA 490
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ LF E IT
Sbjct: 491 DVLQGRELF--------------------------EEMCAAGIT---------------- 508
Query: 508 RFSFKPTTTTYNILMK--ACCTDYYRVKALMNEM-RTVGLSPNHISWTILIDACGGSGNV 564
P TY LM+ + +++ L+ +M R G + ++T +I A G +G
Sbjct: 509 -----PDAVTYTTLMELYGQAGNKEQMEELVQQMSRKRGFPRDVRAFTAVIRAYGRAGLW 563
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
AL++L M+ + P VV+Y TA+ S R +AF L E MK ++PN V
Sbjct: 564 REALELLGTMKARNVKPTVVSYGTAMAALAASGRHVEAFELLEAMKREGVEPNQV 618
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 200/489 (40%), Gaps = 67/489 (13%)
Query: 159 KNECQRLLD-SGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIR-YACI 216
++ Q +D SG+ EMF LM E + D+ I++ N+ + + A+ Y
Sbjct: 166 EDALQNAIDFSGDDEMFHSLMLSFES---KLCGSDDCTYIIRELGNRGECDKAVGFYEFA 222
Query: 217 VPR------ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
V R L + G+ + A R ++ + +Y +I G G
Sbjct: 223 VKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSG 282
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASY 327
+ ++ +++ ++ + N+ +N++++ + K + + MQ+ V D ++
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITF 342
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N LL C G A+ ++ E+ + ++ DVF+Y+T++ +A ++
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMSNRR----IEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M + + PN +++S++I+ A AG ++A++LF EM + N LL +
Sbjct: 399 QMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVG 458
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ + A + R ++G
Sbjct: 459 RSEEALDILRE------MASVG-------------------------------------- 474
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
K TYN L+ Y VK + EM+ + PN ++++ LID G +
Sbjct: 475 ---IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ + + G+ DVV Y+ I ++ + A SL +EM I PN+VTY +++
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 626 RARSRYGSL 634
A R ++
Sbjct: 592 DAFGRSATM 600
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +G+ A+ +++ K++ PN+ +ID CG G K A + D
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 284 SQN-VTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+N V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + AK ++ +V +YST++ FA A + AL + +M + + ++
Sbjct: 391 DLAFEI---LAQMPAKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM- 505
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
KR P TY+
Sbjct: 506 ----------------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS ++++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERS 603
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 151/328 (46%), Gaps = 31/328 (9%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G + DL + A +K+ + PN+ T+ID G + ++ ++ ++R N+ L+
Sbjct: 387 GGQMDLAFEILAQMPAKRIM--PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR 444
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+N+L+++ + L++ + M +G+ D+ +YN LL G ++++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K + VL ++ TYST++ ++ ++ A++V + SAG+ + + +S+LI+A
Sbjct: 505 MKR---EHVLP-NLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALC 560
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
GLV A+ L +EM + G PN N ++ A + +R+ +L + AL
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALS 620
Query: 470 E--DYDGN---------TDRISNMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPT 514
E + +GN T +N KD Q ++ H + KP
Sbjct: 621 ELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMH------QLEIKPN 674
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMR 540
T++ ++ AC C + L+ E+R
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 171/432 (39%), Gaps = 91/432 (21%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
S +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC
Sbjct: 259 AFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC----- 313
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
KG ++ + + K F ++M V P+ I
Sbjct: 314 ---------------GKGGME-----FKQVAKFF-------------DEMQRNCVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEI---- 396
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ M K PN V S T +
Sbjct: 397 -------------------LAQMPAKRIM-----PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR + ++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAG 651
+ V+++ AG
Sbjct: 533 AMEVFREFKSAG 544
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+GK+ + + K+ PN+ T+ID G Y ++ ++ + +S + +
Sbjct: 489 YGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRAD 548
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA----------- 337
+ ++++L++ + + + + M K G+ ++ +YN ++ A +
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSN 608
Query: 338 -GNTVLAQEIYGEVKHLEAKGVLKL-DVFTYSTIVKVFADAKWWQMA----LKVKEDMLS 391
G+ + E+ E V++L T ++ D K L+V M
Sbjct: 609 GGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQ 668
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+ PN +T+S+++NAC+ E A L EE+
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 68/420 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L C+ +E G +L SA+R Y K PN++I T+ID+ + G + ++ +Y+
Sbjct: 579 LLICS-CKELG---NLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQ 634
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
L+ + L++ F+ ++ + K G + D AC +V
Sbjct: 635 LKCSGIALDMVAFSIVVRMYV--------------KAGSLKD---------AC-----SV 666
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA +E + + D++ Y +++++ + +L + V + +
Sbjct: 667 LAT--------MEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELY 718
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +IN CA A V + LF EMLQ G PN+ N++L +A F++A LF W
Sbjct: 719 NCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELF--WMA 776
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
K + Y NT + +KD N + V N + F + YN
Sbjct: 777 RKRGLVDVISY--NTVIAAYGHNKD---FKNMASAVRNMQFDGFS------VSLEAYN-- 823
Query: 522 MKACCTDYYR-------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
C D Y + ++ M+ + +H ++ I+I+ G G ++ +L +
Sbjct: 824 ---CMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTEL 880
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY---ITLLRARSRY 631
RE G+ PD+ +Y T IK + ++ A L +EM+ I+P+ +TY IT L+ +Y
Sbjct: 881 RECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKY 940
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L+ ++ Y+ I++V + W A + + E S G + +++LI AC+ G +
Sbjct: 219 GKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNML 278
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDG 474
F ML+ G +PN +L+ L+ + W + + +
Sbjct: 279 LGGKWFRMMLELGVQPNIATFGMLMG-------------LYQKGWNVEEAEFVF------ 319
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
S + + S YS+ T Y L + Y + +
Sbjct: 320 --------------SKMRSFGIICQSAYSAM---------ITIYTRL-----SLYNKAEE 351
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
++ M ++ N +W +L++A G +E A Q+L M+E SP++VA+ T I
Sbjct: 352 IIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYG 411
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ + A LF ++++ ++P+ TY +++ R G+ E +
Sbjct: 412 KLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAE 455
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 174/454 (38%), Gaps = 58/454 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ F + +GK ++ +A R + + P+ R++I+ G G+Y ++ Y++
Sbjct: 401 VAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKE 460
Query: 282 LRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ N +L+N+ A D + + +M K+G + LLKA AG
Sbjct: 461 LKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHS-SILGTLLKAYEKAGR 519
Query: 340 T-----VLAQEIYGEVKHLEAKGVLKLDVFTY------STIVKVFADAKWWQMALKVKED 388
+L Y V L + + V TY +KV D KW ED
Sbjct: 520 INKVPLLLKDSFYQHV--LVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTF---ED 574
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ-CCNILLQACVEAC 447
L + LI +C G +E A+ ++ +M ++ +PN C ++ V C
Sbjct: 575 NL----------YHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGC 624
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT----PNFVPNSH-Y 502
F A +L++ S + + + KD S+ T N +P+ + Y
Sbjct: 625 -FAEAEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLY 683
Query: 503 SSFDKRFS----FKPTTTTYNILMKA--------------CCTDYYRV---KALMNEMRT 541
+ + Y+ ++K+ CC V L +EM
Sbjct: 684 RDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQ 743
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G SPN I++ +++D G + A ++ + R+ G+ DV++Y T I +K K
Sbjct: 744 RGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLV-DVISYNTVIAAYGHNKDFKN 802
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
S M+ +L Y +L + G +
Sbjct: 803 MASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQME 836
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 44/451 (9%)
Query: 228 VREFGKKRDLVSALRAY-DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+R G++ D +A R + S S + + T+I C G+ + + +
Sbjct: 232 LRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELG 291
Query: 287 VTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
V NI F LM + N + +F V+ M+ G++ A Y+ ++
Sbjct: 292 VQPNIATFGMLMGLYQKGWNVEEAEF---VFSKMRSFGIICQSA-YSAMITIYTRLSLYN 347
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+EI G L + + ++V + ++ ++ + A +V +M A +PN + +
Sbjct: 348 KAEEIIG----LMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAF 403
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS--- 458
++LI + A LF ++ AG EP+ +++ + A ++
Sbjct: 404 NTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKR 463
Query: 459 ----------WTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SITNT----------PNF 496
+TL Q A +D +G + +M Q SI T N
Sbjct: 464 LGYMPNSSNLYTLINLQ-AKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINK 522
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
VP SF + T+ + ++ +K C D ++ + + + + +L
Sbjct: 523 VPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVD--EALKVLGDKKWKDQTFEDNLYHLL 580
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I +C GN+E A++I M + P++ T I + +A L++++K I
Sbjct: 581 ICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKCSGI 640
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
++V + ++R + GSL + LA +
Sbjct: 641 ALDMVAFSIVVRMYVKAGSLKDACSVLATME 671
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 28/286 (9%)
Query: 176 GLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRY--ACIVPRADILFCNFVREFGK 233
G+ + +E+ + ELD + ++ ++ NL ++ C + F ++R GK
Sbjct: 161 GIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGK 220
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY-MKSRAIYEDLRSQNVTLNIY 292
L L AY+ I+ V G D+ R I E S L+
Sbjct: 221 ---LEKNLNAYNV---------------ILRVLGRREDWGTAERMIGEVSDSFGSELDFR 262
Query: 293 VFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
VFN+L+ + L + ++ M +LGV ++A++ +L+ N A+ ++ ++
Sbjct: 263 VFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKM 322
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ G++ YS ++ ++ + A ++ M V N W L+NA +
Sbjct: 323 RSF---GIICQS--AYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQ 377
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
G +E+A + EM +A PN N L+ + A RLF
Sbjct: 378 QGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLF 423
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 162/383 (42%), Gaps = 34/383 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + T++ G GD K ++ ++R + + N+ ++NS+++ L V
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M G D +++ L+ C G A+ + E E L ++ +Y++++
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWE----LNPNLSSYTSLIH 442
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F +A + +M+ G TP+ +T+ +LI+ AG V +A+ + E+M P
Sbjct: 443 GFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLP 502
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
++ N+L+ L + L + + E + N H DK T
Sbjct: 503 DANIYNVLISG------------LCKKKMLPAARNLIEEMLEQNV-------HPDKYVYT 543
Query: 492 N-TPNFVPNSHYSSFDKRFSF------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
F+ N K F F P YN ++K C +A+ M+ MR V
Sbjct: 544 TLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV 603
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ ++T LI GN+ GAL +L M + P+VVAY++ I + A
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA 663
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
LF M+ + PN++TY L+
Sbjct: 664 ECLFGSMESQGLFPNVITYTILI 686
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 32/356 (8%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G + + YN+L+ C G+ + GE +EAKG+L V TY T++
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGE---MEAKGLLP-TVVTYGTLMSWLGRKGD 344
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ + +M + PN ++S+I+A QA+ + ++M GC+P++ +
Sbjct: 345 LEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFST 404
Query: 439 LLQACVEACQFDRAFRLFRS---WTL-----SKTQVALGEDYDGNTDRISNM--EHKDKQ 488
L+ + + A RL R W L S T + G G SN+ E ++
Sbjct: 405 LISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464
Query: 489 SITNTPNFVPNSHYSSFDKRFS-------------FKPTTTTYNILMKACCTDYYRVKA- 534
+ F H + S P YN+L+ C A
Sbjct: 465 HTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAAR 524
Query: 535 -LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L+ EM + P+ +T LID + +++ A +I + M + G+ PDVV Y IK
Sbjct: 525 NLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGY 584
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ + +A M+ P+ TY TL+ ++ G+ + L++ DM K
Sbjct: 585 CQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN---ISGALSLLCDMMK 637
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VN 301
A+++ L N+Y + + G+C M +R + E++ QNV + YV+ +L++ +
Sbjct: 496 AARQLLPDANIYN----VLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIR 551
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
L ++++ M++ G+ D+ YN ++K C G A E ++ + G +
Sbjct: 552 NESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV---GRIP- 607
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D FTY+T++ +A AL + DM+ PN + +SSLIN G + A LF
Sbjct: 608 DEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF 667
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
M G PN IL+ + + + RA F L++
Sbjct: 668 GSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G PN + + +LID G+V + +L M G+ P VV Y T + R L++
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SL EM+ ++ PN+ Y +++ A + S Q L V + M+ G
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRS---ASQALVVLKQMFAGG 394
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 53/308 (17%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+M D+ SYN L+ GN A ++ E L +K ++ V TY+T++
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSE---LRSKNLVP-SVVTYNTLIDGGCRTGNL 398
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+A +K+DM+ G+ P+ +T++ L+ G + A LF+EML G +P+
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPD------- 451
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
C+ + T +GE GN + M+ + K
Sbjct: 452 ---CI-----------------AYTTRIVGELKLGNPSKAFGMKEEMKAE---------- 481
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
F P TYN+L+ C ++ L+ +MR G+ P+H+++T +I A
Sbjct: 482 ----------GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
SG + A ++ M + G+ P VV YT I RL A F+EM+ + PN
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 618 LVTYITLL 625
++TY L+
Sbjct: 592 VITYNALI 599
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 164/385 (42%), Gaps = 35/385 (9%)
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
I FN++M+ + + +EV M+ G + SYN+L+ G A+E+
Sbjct: 207 IVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIE 266
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L LK+ TY+ +++ F + ++ A ++ +ML G P +T+++++ +
Sbjct: 267 QMSMLG----LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQ 465
G V A + M+ P+ N L+ F A LF RS L +
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382
Query: 466 VALGEDYDG-----NTDRISNMEHKDKQSITNTPNFV---------------PNSHYSSF 505
V DG N D M+ D P+ V P + F
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMK-DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK-ELF 440
Query: 506 DKRFS--FKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
D+ S KP Y I+ + + + + EM+ G P+ I++ +LI+
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN + A ++++ MR +G+ PD V YT+ I + S L++A +F +M I P++VTY
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQD 646
L+ + + G L ++ QD
Sbjct: 561 TVLIHSYAVRGRLDFAKKYFDEMQD 585
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+I G++ ++ ++ +LRS+N+ ++ +N+L++ +L +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M K G+ D+ ++ IL++ C GN +A+E++ E + ++G LK D Y+T +
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE---MLSRG-LKPDCIAYTT--R 458
Query: 372 VFADAKWWQ--MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + K A +KE+M + G P+ IT++ LIN G + A L ++M G
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ ++ A + + +A +F S+M K
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVF-----------------------SDMLKK---- 551
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLS 545
P+ TY +L+ + D+ K +EM+ G+S
Sbjct: 552 --------------------GIHPSVVTYTVLIHSYAVRGRLDF--AKKYFDEMQDKGVS 589
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN I++ LI ++ A + M G+SP+ YT I + + A L
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649
Query: 606 FEEMKHYQIQPNLVTYITLLRARSR 630
+++M +I+P+ T+ L++ S+
Sbjct: 650 YKDMLDREIKPDSCTHSALMKHLSK 674
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 22/279 (7%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV + ++K+ D +V M+ + P +T+++++++ G V +A+ +
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVL 230
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M GC+PN N+L+ +FDRA L ++ +V+ Y+
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVS-AHTYNPLIRGFCK 289
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC-----TDYYR-VKAL 535
E ++ N R + PT TYN +M + C +D R + +
Sbjct: 290 KEMFEEA----------NDLRREMLGRGAL-PTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+NE L P+ +S+ LI GN AL + +R + P VV Y T I R
Sbjct: 339 VNE----DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCR 394
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ L A + ++M + + P++VT+ L+R + G+L
Sbjct: 395 TGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 28/288 (9%)
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ PN ++SL+ A A G +A +++EML+ G P + + A +A
Sbjct: 132 EMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAE 191
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYD------GNTDRISNMEHKDKQ-SITNTP-NFVPN 499
+F+ A R+F+ S Y+ G + S + +Q P V
Sbjct: 192 RFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTF 251
Query: 500 SHYSSFDKRFS-------------FKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVG 543
+ +F K + KP TY L+ A + RV+ + EM G
Sbjct: 252 NSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAY-SKARRVEEAHVVFREMVASG 310
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ I++ L+DA VEGA + K M +D PD+ +YTT + + +K+A
Sbjct: 311 LRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAE 370
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L + MK ++PN+VTY TL++ Y S+H++ L ++D+ KAG
Sbjct: 371 RLLKRMKQAGLEPNVVTYGTLMQG---YTSVHDINAMLQTFEDLQKAG 415
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 159/365 (43%), Gaps = 38/365 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDL-----RSQNVTLNIYVFNSLMNVNAHDLKFT 308
PN+ ++++ G+++++ +IY+++ VT +Y+ N+L A
Sbjct: 140 PNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYI-NAL--CKAERFNDA 196
Query: 309 LEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++K + + D YN++L AG Q ++ + ++ GV + V T++
Sbjct: 197 ERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALF---RQMKGAGV-PMTVVTFN 252
Query: 368 TIV---KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+++ K ADA+ M +A + P+ IT++ LINA + A VE+A +F EM
Sbjct: 253 SLMAFQKTVADAE------ACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREM 306
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ +G P+ N LL A + + + A LF+S + + D T ++
Sbjct: 307 VASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCR----PDIRSYTTLLA---- 358
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRT 541
+ NT N K+ +P TY LM+ T + + A++ +++
Sbjct: 359 ----AYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGY-TSVHDINAMLQTFEDLQK 413
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ PN +T+L+ G + E AL K M + G D + + C S++ ++
Sbjct: 414 AGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDACQTSEQKQE 473
Query: 602 AFSLF 606
F
Sbjct: 474 VLEYF 478
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 150/394 (38%), Gaps = 60/394 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLG 319
+I G G + + ++R + N+ F SL+ +A F +Y+ M K G
Sbjct: 113 MIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTG 172
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y + + A C A A+ I+ K L+ K D Y+ ++ + A +
Sbjct: 173 PAPTEVTYQVYINALCKAERFNDAERIF---KCLDESAEAKPDARLYNLMLHTYGKAGKF 229
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ M AGV +T++SL+ A V A M A +P+ L
Sbjct: 230 SEQQALFRQMKGAGVPMTVVTFNSLM---AFQKTVADAEACLRHMQAAKIKPDVITYTGL 286
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A +A + + A +FR S
Sbjct: 287 INAYSKARRVEEAHVVFREMVAS------------------------------------- 309
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
+P+ YN L+ A C + ++L M P+ S+T L+ A
Sbjct: 310 ----------GLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAA 359
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A ++LK M++ G+ P+VV Y T ++ + FE+++ I+PN
Sbjct: 360 YANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPN 419
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L+R +G + + L+ ++ M +G
Sbjct: 420 STIFTLLVRT---FGQQEDFESALSWFKKMLDSG 450
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYK 313
+I G+ Y K+R ++ ++ + + + +N+L++ A +++ ++K
Sbjct: 280 VITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFK 339
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+M + D+ SY LL A GN A+ + +K ++ G L+ +V TY T+++ +
Sbjct: 340 SMGQDRCRPDIRSYTTLLAAYANTGNMKKAERL---LKRMKQAG-LEPNVVTYGTLMQGY 395
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
L+ ED+ AG+ PN+ ++ L+ E A+ F++ML +GC +
Sbjct: 396 TSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQ 455
Query: 434 QCCNILLQACVEACQFDRAFRLFRS 458
+ L+ AC + Q F S
Sbjct: 456 RSRAALMDACQTSEQKQEVLEYFGS 480
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 154/377 (40%), Gaps = 52/377 (13%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ S + ++Y++ ++ DL E+ +M+ G ++ YN+L+ C
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
E G K L K LK DV TY T+V + +++ L++ ++ML +
Sbjct: 274 KKQKV---WEAVGIKKDLAGKD-LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ SSL+ G +E+A++L + ++ G PN N L+ + + +F A L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSFDKR 508
F DR+ + + PN V S D
Sbjct: 390 F--------------------DRMGKIGLR--------PNDVTYSILIDMFCRRGKLDTA 421
Query: 509 FSF---------KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF K + YN L+ C D + M EM L P +++T L+
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G + AL++ M G++P + +TT + R+ ++ A LF EM + ++PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 618 LVTYITLLRARSRYGSL 634
VTY ++ G +
Sbjct: 542 RVTYNVMIEGYCEEGDM 558
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 157/392 (40%), Gaps = 63/392 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYE-----DLRSQNVTLNIYVFNSLMNVNAHDLKF 307
SPN+++ +ID + ++ +++ LR +VT +I + M L
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID---MFCRRGKLDT 420
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--KHLEAKGVLKLDVFT 365
L M G+ + YN L+ C G+ A+ E+ K LE V T
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT------VVT 474
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y++++ + AL++ +M G+ P+ T+++L++ AGL+ A+ LF EM
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ +PN N++++ E +AF + T
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT------------------------- 569
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKALMNEMRTVGL 544
VP++ +S++P ++ C T K ++ +
Sbjct: 570 -------EKGIVPDT--------YSYRP------LIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
N I +T L+ G +E AL + + M + G+ D+V Y I ++ K K F
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
L +EM ++P+ V Y +++ A+S+ G E
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 163/401 (40%), Gaps = 38/401 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
ALR Y +P++Y T++ G + ++ ++ NV N +N ++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 300 --VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
D+ E K M + G++ D SY L+ CL G A+ ++ + H KG
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLH---KG 606
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+L+ Y+ ++ F + AL V ++M+ GV + + + LI+ +
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL-----------SKTQV 466
L +EM G +P+ ++ A + F AF + W L + T V
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI---WDLMINEGCVPNEVTYTAV 723
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
G G + + K Q +++ PN V Y F +IL K
Sbjct: 724 INGLCKAGFVNEAEVLCSK-MQPVSSVPNQVT---YGCF------------LDILTKGE- 766
Query: 527 TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
D + L N + GL N ++ +LI G +E A +++ M DG+SPD + Y
Sbjct: 767 VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
TT I R +K+A L+ M I+P+ V Y TL+
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 55/368 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ Y R +I + G +++ + L N LN + L++ + K L V
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV D+ Y +L+ + L +G +K + +G LK D Y++++
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL---FFGLLKEMHDRG-LKPDDVIYTSMID 690
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++ A + + M++ G PN +T++++IN AG V +A L +M P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N C D L+K +V D Q
Sbjct: 751 NQ---------VTYGCFLD---------ILTKGEV-------------------DMQKAV 773
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + ++ T TYN+L++ C +A L+ M G+SP+ I
Sbjct: 774 ELHNAILKGLLAN----------TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T +I+ +V+ A+++ M E G+ PD VAY T I C + + +A L EM
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 610 KHYQIQPN 617
+ PN
Sbjct: 884 LRQGLIPN 891
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 146/348 (41%), Gaps = 58/348 (16%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E++ +M +G+ D+ Y ++++ C + A+E+ + H+EA G +++ Y
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM---IAHMEATGC-DVNIVPY 265
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+ ++ + K W+ A+ +K+D+ + P+ +T+ +L+ E + + +EML
Sbjct: 266 NVLIDGLCKKQKVWE-AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ + L++ + + + A L + R+ +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK--------------------RVVD---- 360
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
F P YN L+ + C ++ + L + M +G
Sbjct: 361 -----------------------FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++++ILID G ++ AL L M + G+ V Y + I + + A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + +++P +VTY +L+ Y S ++ + L +Y +M G
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGG---YCSKGKINKALRLYHEMTGKG 502
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 154/378 (40%), Gaps = 28/378 (7%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
GD + ++ ++ + + + SLM + + L +Y M G+ + ++
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LL AG A +++ E+ A+ +K + TY+ +++ + + A + +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEM----AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M G+ P+T ++ LI+ G +A + + + CE N C LL
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG----- 621
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI---SNMEHKDKQSITNTPNFVPNSHYSS 504
F R +L + ++ + V G D D + +++HKD++ + H
Sbjct: 622 -FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG---LLKEMH--- 674
Query: 505 FDKRFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
D+ KP Y ++ K+ D+ + + M G PN +++T +I+ +G
Sbjct: 675 -DR--GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK-RLKQAFSLFEEMKHYQIQPNLVTY 621
V A + M+ P+ V Y + + + + +++A L + + N TY
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATY 790
Query: 622 ITLLRARSRYGSLHEVQQ 639
L+R R G + E +
Sbjct: 791 NMLIRGFCRQGRIEEASE 808
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAI 278
D+++ + + K D A +D PN +I+ G+C G ++ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN--GLCKAGFVNEAEVL 739
Query: 279 YEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ + N + +++ D++ +E++ + K G++A+ A+YN+L++ C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E+ + + GV D TY+T++ + A+++ M G+
Sbjct: 799 RQGRIEEASEL---ITRMIGDGV-SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
P+ + +++LI+ C AG + +A L EML+ G PN++
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 30/292 (10%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A KV M G PN ++ ++L+ A A +F M G EP++ I+L+
Sbjct: 157 AEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLK 216
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHK 485
VE +F A LF S L+K + L D GN ++ + M +
Sbjct: 217 TFVEGSKFKEAEELFDS-LLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAAR 275
Query: 486 DKQSITNTPNFVPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL-- 535
T T N + + ++Y K R +P +Y +L+ A +AL
Sbjct: 276 GVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAV 335
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EM G+ P H ++ IL+DA SG VE A + K M+ D SPD+ +YTT + V
Sbjct: 336 FEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVN 395
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ ++ A + F +K +PN+VTY TL++ Y ++ +++ + Y++M
Sbjct: 396 ASDMEGAENFFRRLKQDGFRPNVVTYGTLIKG---YAKINNLEKMIKRYEEM 444
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 163/390 (41%), Gaps = 62/390 (15%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLG 319
+I G GD+ ++ + + + N+ +LM ++ +++ MQ G
Sbjct: 144 LITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGG 203
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ + + E K VLK D + I+ +F A +
Sbjct: 204 PEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKE-KPVLKPDQKMFHMIIYMFKKAGNY 262
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV +M + GV T+T++SL++ N ++ ++++M +AG +P+ +L
Sbjct: 263 EKARKVFAEMAARGVPQTTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 319
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A +A + + A +F E D
Sbjct: 320 ISAYGKARREEEALAVFE------------EMLDA------------------------- 342
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + M+ SP+ S+T ++ A
Sbjct: 343 ----------GIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSA 392
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + +++DG P+VV Y T IK + L++ +EEMK I+ N
Sbjct: 393 YVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVN 452
Query: 618 LVTYITLLRARSR---YGS----LHEVQQC 640
T++ A + +GS +E++ C
Sbjct: 453 QTILTTIMDAYGKNKDFGSAVIWFNEIESC 482
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 172/393 (43%), Gaps = 26/393 (6%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+++ F + +GK D A + + K +PN+ +++ G Y + AI+
Sbjct: 137 SEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIF 196
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKAC 334
++S + + ++ V K E++ N +K + D +++++
Sbjct: 197 RRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMF 256
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AGN A++++ E + A+GV + V TY++++ + ++ K+ + M AG+
Sbjct: 257 KKAGNYEKARKVFAE---MAARGVPQTTV-TYNSLMSFETN---YKEVSKIYDQMQRAGL 309
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ ++++ LI+A A E+A+ +FEEML AG P + NILL A + ++A
Sbjct: 310 QPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKI 369
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F+S + D T +S + N + ++ K+ F+P
Sbjct: 370 VFKSMKRDRC----SPDICSYTTMLS--------AYVNASDMEGAENFFRRLKQDGFRPN 417
Query: 515 TTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TY L+K A + ++ EM+ G+ N T ++DA G + + A+
Sbjct: 418 VVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFN 477
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
+ G+ PD A + + ++ L +A L
Sbjct: 478 EIESCGLRPDQKAKNILLSLAKTAEELDEANQL 510
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+P+ TY I++K +A L+N+ + V L P+ + ++I +GN E
Sbjct: 205 EPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPV-LKPDQKMFHMIIYMFKKAGNYE 263
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ M G+ V Y + + K + + ++++M+ +QP++V+Y L+
Sbjct: 264 KARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 320
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
A YG ++ LAV+++M AG
Sbjct: 321 SA---YGKARREEEALAVFEEMLDAG 343
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +LI A G G+ A ++L +M + G +P+VV++T ++ R +R A ++F
Sbjct: 137 SEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIF 196
Query: 607 EEMKHYQIQPNLVTYITLLR 626
M+ +P+ +TY +L+
Sbjct: 197 RRMQSGGPEPSALTYQIMLK 216
>gi|110288710|gb|AAP52447.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215694798|dbj|BAG89989.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 735
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 107 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 160
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 161 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 220
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 221 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 277
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 278 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 336
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 337 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 396
Query: 620 TYITLLRA 627
L+ A
Sbjct: 397 MMNALITA 404
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 50 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 109
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 110 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 169
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 170 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 229
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 230 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 289
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 290 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 349
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 350 DARAKGYQVG-----------------------------------------------TIA 362
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 363 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 422
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 423 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 474
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 104 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 163
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 164 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 203
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 273 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 327 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 386
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 387 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 442
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 443 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 499
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 63 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 118
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 119 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 172
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 173 -----------------------------------------IEPNVNTYSALIDGCAKAG 191
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 192 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 251
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 252 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFA-- 309
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 310 -LKIYEDMNKIG 320
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 181/418 (43%), Gaps = 57/418 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G KS E + QN LN F +L++ V + ++++ MQK G+ D++ Y
Sbjct: 58 GQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLY 117
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD-AKWWQMALKVK 386
++L+ C A +Y E+K L+ ++ D+ S ++ F + K + +
Sbjct: 118 DVLIGGFCSNKKLDKALSLYAEMKMLK----IQPDIGVVSKLISSFPEEGKLIDILEETL 173
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG--------------CEPN 432
EDM + T+ +S++++ N+GL+++A L M+ G PN
Sbjct: 174 EDM---NIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPN 230
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED---YDG------NTDRIS--- 480
+ +I++ ++AC+ D A LF+ ++ D Y+ N+DR+
Sbjct: 231 TASFSIVINGLMQACKLDLAVCLFQDMA----EIGCNRDLLLYNNLINGLCNSDRLEESY 286
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKR---------------FSFKPTTTTYNILMKAC 525
+ + ++S F NS + KR + +P Y +L++
Sbjct: 287 KLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKL 346
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C +A + +M G PN I+++ L+ V+ AL++ K + G PDV
Sbjct: 347 CKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDV 406
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+AY +K + R ++A +LF EM + P++VTY L+ + G + + CL
Sbjct: 407 IAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCL 464
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 138/350 (39%), Gaps = 56/350 (16%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
E +R + +I V N LM DL L +++M ++G D+ YN L+ C N
Sbjct: 225 EKIRPNTASFSI-VINGLMQACKLDLAVCL--FQDMAEIGCNRDLLLYNNLINGLC---N 278
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +E Y +K +E G K FT ++I + AL + + M G P
Sbjct: 279 SDRLEESYKLLKEMEESG-FKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVK 337
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ L+ G +A +M+Q G PN + LL +E + D+A +LF
Sbjct: 338 HYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLF--- 394
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
KD + P+ + YN
Sbjct: 395 -------------------------KDISARGRCPDVI-------------------AYN 410
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
ILMK + +A L NEM GL P+ +++ +LID +G ++ A+ L M
Sbjct: 411 ILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAK 470
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
P+V YTT I ++ R A L+ EM+ +PN V ++ +
Sbjct: 471 EREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHG 520
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 120/316 (37%), Gaps = 66/316 (20%)
Query: 181 LEEFRLPVKELDEE-FRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
LEE +KE++E F+ Q +N + C+ R D+ DLV
Sbjct: 282 LEESYKLLKEMEESGFKPTQFTLNSI-------FGCLCKRQDV---------SGALDLVK 325
Query: 240 ALRAYDASK--KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
+R Y KH + +C+ G ++ D+ + NI +++L
Sbjct: 326 KMRLYGCEPWVKHYTLLVRKLCKH--------GKAAEASIFLTDMVQEGFPPNIIAYSAL 377
Query: 298 MN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ + ++ L+++K++ G D+ +YNIL+K A T A+ ++ E +
Sbjct: 378 LGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNE---MVM 434
Query: 356 KGVL----------------------------------KLDVFTYSTIVKVFADAKWWQM 381
KG++ + +VFTY+T++ A
Sbjct: 435 KGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDD 494
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + +M G PN + + I+ E A+ F EM + EP++ L+
Sbjct: 495 AVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVS 554
Query: 442 ACVEACQFDRAFRLFR 457
A V F AF + +
Sbjct: 555 AFVNISNFPMAFEILK 570
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 168/407 (41%), Gaps = 61/407 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------LAQ 344
+FNSL++ + D + ++ K M+K YNIL+ + C G LA+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439
Query: 345 EIYGEVKHLEAKGVLK---------------------------------LDVFTYSTIVK 371
+ Y E+ L A VL D TYS ++
Sbjct: 440 KAYNEM--LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A + ++M GV P+ T++ LI+ + AG+++QA + +EM++ GCEP
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY--DGNTDRISNM 482
L+ A ++A + A LF ++K T AL + Y GN ++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEM 539
+ + + P+ Y + KP TY L+ C ++VK L+ M
Sbjct: 617 -YARMRGDADIPDV---DMYFKIKNNVAEKPNVVTYGALVDGLCKA-HKVKDARDLLETM 671
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN I + LID + ++ A ++ M E G +P+V Y++ I + KRL
Sbjct: 672 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 731
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +M PN+V Y ++ S+ E + + + ++
Sbjct: 732 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 141/369 (38%), Gaps = 62/369 (16%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N L NV LE ++ G +YN L++ A AQ ++ E+ L
Sbjct: 219 NGLWNV-------ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAG 412
L +D FT + W+ AL + KED + PNTI ++ +I+ A
Sbjct: 272 ----LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEAS 322
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSK 463
E+AM M C PN Q ILL C+ Q R R+ + S+T+
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 464 TQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V +D+ + ME + KP YNI
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKME------------------------KCECKPGYVVYNI 418
Query: 521 LMKACCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
L+ + C+ + + NEM + G N ++ G G E A +++
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G PD Y+ I + R++ AF LF+EMK + P++ TY L+ S+ G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 633 SLHEVQQCL 641
+ + L
Sbjct: 539 IIKQAHNWL 547
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 162/383 (42%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M +LG+ D + +A C G + E
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK-------WREAL 296
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K + Y+ ++ +A +++ A+ M S PN T+ L+ C N
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + + M+ GC P+ N L+ A ++ F A++L + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 460 TLSKTQVALGEDYDGN-TDRISNMEHKDKQS---ITNTPNFVPNSH----YSSFDKRF-- 509
+ + G + G T ++ + + S + N N V + + F+K +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C + RV+ L EM+ G+ P+ ++TILID
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLC-NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A L M DG P VV YTT I +++K++ A LFE M PN++
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G++ + Q A
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYA 618
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 56/401 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++ +++ + + +L++ + A + E+
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G ++ +Y L+ C +GN A +IY ++
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD------------------ 623
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AD M K+K ++ PN +T+ +L++ A V+ A L E M GCEP
Sbjct: 624 --ADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD----- 486
N+ + L+ +A + D A +F + Y DR+ + D
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV-YTYSSLIDRLFKDKRLDLVLKV 737
Query: 487 -KQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
+ + N+ PN V T + L K TD LM M G
Sbjct: 738 LSKMLENSCAPNIVI---------------YTEMIDGLSKVAKTD--EAYKLMLMMEEKG 780
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++T +ID G +G V+ L++ + M G +P+ V YT I C + L +A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQQ 639
+L EEMK ++ +Y ++ R G L EV++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 148/381 (38%), Gaps = 46/381 (12%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M G + D ++Y+ ++ C N + + K ++ GV+ DV+TY+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLC---NASRVENAFFLFKEMKGTGVVP-DVYTYTIL 530
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F+ A + A ++M+ G P +T+++LI+A A V A LFE M+ GC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 430 EPNSQCCNILLQACVE------ACQF-------------DRAFRLFRSWTLSKTQVALGE 470
PN L+ + ACQ D F++ + V G
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------S 510
DG + +D PN+ Y + F
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710
Query: 511 FKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P TY+ L+ D V ++++M +PN + +T +ID + A
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ +M E G P+VV YT I ++ ++ + LF EM PN VTY L+
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 629 SRYGSLHEVQQCL-AVYQDMW 648
G L E L + Q W
Sbjct: 831 CATGHLDEAYALLEEMKQTYW 851
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 26/256 (10%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI C GL A+ + G +P N L+Q + A + D A + R +
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
LS + LG + ++ + ++ S+ +FVPN T YN
Sbjct: 272 LSMDEFTLGF-FAQALCKVG--KWREALSLIEKEDFVPN---------------TILYNK 313
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + +A+ +N MR+ PN ++ IL+ C + +IL +M +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH--- 635
P + + + +S A+ L ++M+ + +P V Y L+ + G L
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 636 EVQQCLAVYQDMWKAG 651
+ Y +M AG
Sbjct: 434 TFELAEKAYNEMLSAG 449
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK + L + +PN +I+ C G ++ A+ E+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ ++ + ++ + +L + + ++K G + Y +L+ AG
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 905
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+A E++ EV K ++ Y++++ F+ A A ++ DM+ GV P+ T+
Sbjct: 906 VALELHKEVISASMSMAAKKNL--YTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963
Query: 402 SSLINACANAGLVEQAMHLFEEMLQ 426
L+ E+A+ L + + Q
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV--TLNIYVFNSLMNVNAHDLKFTLEV 311
P++ +ID G Y K+ + Y +L T + Y + L+ V
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+K G YN + G+T A EI+ +K + + TY+ ++
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK----RDRCQPSTATYTMLIN 281
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ A MALKV +M S PN T+++L+NA A GL E+A +FE++ +AG EP
Sbjct: 282 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 341
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI------SNMEHK 485
+ N L++A + RA + + + +G + D + I H+
Sbjct: 342 DVYAYNALMEA------YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 395
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
D Q++ KR PT ++ +L+ A + + ++N+M G
Sbjct: 396 DAQAVFEVM------------KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 443
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ +++ G G E ++L M + D+ Y I + R+ +
Sbjct: 444 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARME 503
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + + P++VT+ + + A SR + +CL V+++M AG
Sbjct: 504 ELFRSLPARNLIPDVVTWTSRIGAYSR---RKQYNRCLEVFEEMIDAG 548
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 25/314 (7%)
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+ I+G + L D+ + V++ + +W + L + + P+ I ++
Sbjct: 115 SNRIWGSLDSLSPNHTTWDDII--NVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 172
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
LI+A L ++A + E+L+A C P +LL+A + ++A +F R +
Sbjct: 173 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKY 232
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ V DG M+ D Q + KR +P+T TY
Sbjct: 233 GFPPSAVVYNAYIDG------LMKGGDTQKAVEIFERM---------KRDRCQPSTATYT 277
Query: 520 ILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ + Y + +EMR+ PN ++T L++A G E A +I + ++E
Sbjct: 278 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 337
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ PDV AY ++ R+ A +F M+H +P+ +Y ++ A R G LHE
Sbjct: 338 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHED 396
Query: 638 QQCLAVYQDMWKAG 651
Q AV++ M + G
Sbjct: 397 AQ--AVFEVMKRLG 408
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P + +++ ++ K D A+ ++ K+ P+ +I++ G +
Sbjct: 235 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 294
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++RSQ NI F +L+N A + + E+++ +Q+ G+ D+ +YN L++A
Sbjct: 295 VFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 354
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
AG A EI+ ++H+ + D +Y+ +V + A + A V E M G+T
Sbjct: 355 RAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 410
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P + L++A + AG V + + +M ++G +P++ N +L QF++
Sbjct: 411 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM--- 467
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----YSSFDKRFS 510
+ ++ ME + +T N + N + ++ ++ F
Sbjct: 468 --------------------EEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Query: 511 FKPT--------TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
P T T I + Y R + EM G P+ + +L+ AC
Sbjct: 508 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGD 567
Query: 563 NVEGALQILKIMRED 577
++ +++ M +D
Sbjct: 568 QIQEVTTVIRTMHKD 582
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 478 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 774 YWTYCLLLK 782
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 59/434 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 241
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 242 LMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 302 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 417 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 444
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 445 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 548
Query: 638 QQCLAVYQDMWKAG 651
+++ M + G
Sbjct: 549 DNAFRLFEMMEQNG 562
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 172/421 (40%), Gaps = 53/421 (12%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 575 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 627
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 924
Query: 651 G 651
G
Sbjct: 925 G 925
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 181/452 (40%), Gaps = 80/452 (17%)
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAH 303
K+ SPN+ +I G+C G +R +++ + V ++ +N+++
Sbjct: 280 KRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLG 337
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L++ + M+K G D +YN L+ C T A+E+ K V
Sbjct: 338 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----VKEGFTPTV 392
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSA------------------------------- 392
T++ ++ + A+ + AL++K M+S+
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452
Query: 393 ----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+ V+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+A L L+K Q DG + IT T FD
Sbjct: 513 LHKAMAL-----LTKMQ------KDGIIPNV----------ITYTTLLQGQCDEHDFDNA 551
Query: 509 F---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
F KP Y +L A C +A +R G++ + +T LID
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYYTTLIDGFS 610
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+GN + A +++ M ++G +PD Y+ + + KRL +A + ++M I+ +
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y L+ R G ++ +Y +M +G
Sbjct: 671 AYTILIDEMLREGKHDHAKR---MYNEMTSSG 699
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 167/435 (38%), Gaps = 78/435 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P I + ++ + D +A R ++ +++ P+ + + D G ++
Sbjct: 528 IIPNV-ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RA 583
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
Y + + V L + +L++ A + F + + M G D +Y++LL A
Sbjct: 584 EEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 334 -----------------------CCLAGNTVLAQEIYGEVKHLEAKGVL--------KLD 362
C + T+L E+ E KH AK + K
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
TY+ + + + A + M GV P+ +T++ LI+ C + G +++A +
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 423 EMLQAGCEPNSQCCNILLQ-------ACVEACQFDRAFRLFR---SWTLSKTQVALGEDY 472
M+ A CEPN +LL+ A V + + L +W L + V G +
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823
Query: 473 DGNT-----------DRISN----MEHKDKQSIT--------------NTPNFVPNSHYS 503
T R+ ++H + ++ +T F +
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S F+P +Y +L+ C D+ +VK+L ++ +G + + ++W IL D +
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943
Query: 562 GNVEGALQILKIMRE 576
G V+ Q+L IM +
Sbjct: 944 GYVDICFQMLSIMEK 958
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 140/368 (38%), Gaps = 33/368 (8%)
Query: 296 SLMNVN--AHDLKFTLEVYKNMQKLG---VMADMASYNILLKACCLAGNTVLAQEIYGEV 350
S++N + A D++ + + + +++ G + YN L++ T +Y +
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQ- 173
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L G+L D TY+T++K + A + +L G+ P T T ++L+
Sbjct: 174 --LVQDGLLP-DTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCR 230
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RS 458
G + +A LF M GC+ N IL+Q EA A LF R+
Sbjct: 231 TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRA 290
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFK---- 512
+T + + M +T V S + K
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350
Query: 513 -----PTTTTYNILMKACCTDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TYN L+ C + L+N G +P +++T LI+ + +
Sbjct: 351 KNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++ M D+ + I ++ RLK+A L E+ + PN++TY +++
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 627 ARSRYGSL 634
+ G +
Sbjct: 471 GYCKSGKV 478
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 53/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K Y+ + + G A + +NIL+ C G+ JAQ ++ + K L+ V
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAI----TKWGLRPSVV 178
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ + ++K ML++GV P+ T+S LIN ++ A LF+EM
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PN L+ + + D A ++
Sbjct: 239 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY---------------------------- 270
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ S P TYN L+ C D + L++EM
Sbjct: 271 --KQMLSQ-----------------SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G+++ A + K M ++ + D VAYT I + R A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ EM ++P+ TY ++ + G + + + L Q
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ 414
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 159/379 (41%), Gaps = 33/379 (8%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+DJ +F + + + L A+ Y +++H CR +++ +
Sbjct: 69 RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++ ++Y FN LM+ D++ V+ + K G+ + SYN L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ ++ML G+
Sbjct: 189 RLGDL---DEGFRLKSAMLASGV-QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN +T+++LI+ G V+ AM ++++ML P+ N L+ + +A L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 456 FRSWT---LSKTQVALGEDYDG---NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ L ++ DG D S EH+ + N
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN----------------- 347
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ Y L+ C + V A ++ EM +VGL P+ ++T++I+ G+V
Sbjct: 348 -IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 568 LQILKIMREDGMSPDVVAY 586
++LK M+ DG P VV Y
Sbjct: 407 XKLLKEMQRDGHVPSVVTY 425
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K++++ E++L G + ++ L++ G + A +F+ + + G P+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSY 180
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ + D FRL + S Q
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------- 209
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
P TY++L+ C + A L +EM GL PN +++T L
Sbjct: 210 ----------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G V+ A++I K M +SPD++ Y T I + LKQA L +EM +
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 615 QPNLVTYITLLRARSRYGSL 634
+P+ +TY TL+ + G L
Sbjct: 314 KPDKITYTTLIDGCCKEGDL 333
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ID G C G + IY+ + SQ+++ ++ +N+L+ DLK
Sbjct: 245 PNGVTFTTLID--GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D +Y L+ CC G+ A E K + + + +LD Y+ +
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFE---HRKRMIQENI-RLDEVAYTAL 358
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ +MLS G+ P+ T++ +IN G V + L +EM + G
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGH 418
Query: 430 EPNSQCCNILLQA 442
P+ N+L+
Sbjct: 419 VPSVVTYNVLMNG 431
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + F + K + A+ Y SP++ T+I G+C GD
Sbjct: 243 LVPNG-VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLK 299
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + +++ + + + + +L++ DL E K M + + D +Y L+
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G +V A+++ E+ + LK D TY+ I+ F K+ ++M
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVG----LKPDARTYTMIINEFCKKGDVWKGXKLLKEMQR 415
Query: 392 AGVTPNTITWSSLINA 407
G P+ +T++ L+N
Sbjct: 416 DGHVPSVVTYNVLMNG 431
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 169/392 (43%), Gaps = 45/392 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--------NVNAHD 304
S NM +C +I ++ + I L S N+ ++ + L+ + A +
Sbjct: 427 SVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIE 486
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L F L K G+ A+ + N LL C GN +E++ +K + KG+L LD
Sbjct: 487 LWFKLAAVK-----GLAANTVTSNALLHGLCERGNM---EEVFEVLKQMLEKGLL-LDRI 537
Query: 365 TYSTIVKVFADAKWWQM--ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+Y+T++ F KW ++ A K+KE+M+ P+T T++ L+ A+ G ++ L
Sbjct: 538 SYNTLI--FGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLH 595
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
E + G PN +LL+ +A + + A + F++ K ++ + + N+
Sbjct: 596 EAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVEL---------SSVVYNI 646
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK-----PTTTTYNILMKA-CCTDYY-RVKAL 535
I N +F R + K PT TY+ L+ CC K +
Sbjct: 647 LIAAYCRIGNVT--------EAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEI 698
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR GL PN +T LI G ++ IL M +G+ P+ + YT I +
Sbjct: 699 FEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK 758
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+K+A L EM I P+ VTY L +
Sbjct: 759 LGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 22/393 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P + C ++ + KS ++ DL Q V +++ F + +N + +++
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDL 277
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M+ LGV ++ +YN ++ +G A K + + V TY ++
Sbjct: 278 FCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRF----KDRMVRSKVNPSVVTYGVLIS 333
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ ++ A +V +M S G PN + +++LI+ G + +A+ + +EM G +P
Sbjct: 334 GLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKP 393
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK--DKQS 489
N N LLQ + Q ++A ++ S V N D S + H+ ++
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV--------NMDVCSYVIHRLMERSG 445
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-GLSPNH 548
+ V + S + R S T L K C + L ++ V GL+ N
Sbjct: 446 FVSALKIV--TKLLSGNIRVSDSLLTPLVVGLCK--CEGHSEAIELWFKLAAVKGLAANT 501
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+ GN+E ++LK M E G+ D ++Y T I C + ++++AF L EE
Sbjct: 502 VTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEE 561
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
M + QP+ TY L++ + G + +V + L
Sbjct: 562 MVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLL 594
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 242 RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN 299
R +K++ PN+Y +++ G C A+ +++L + V L+ V+N L+
Sbjct: 592 RLLHEAKEYGFVPNVYTYALLLE--GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIA 649
Query: 300 VNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
++ ++ M+ G++ A+Y+ L+ C G A+EI+ E+++ +G
Sbjct: 650 AYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN---EG 706
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+L +VF Y+ ++ + + +M S G+ PN IT++ +I+ G +++A
Sbjct: 707 LLP-NVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765
Query: 418 MHLFEEMLQAGCEPNSQCCNIL 439
L EM++ G P++ N L
Sbjct: 766 RELLNEMIRNGIAPDTVTYNAL 787
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
R ++ L++ N+ L+ SL V A++L + EV+ ++ GV D+ ++ + A C
Sbjct: 215 RGVFPCLKTCNLLLS-----SL--VKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFC 266
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A +++ + +E GV +V TY+ ++ + ++ AL+ K+ M+ + V
Sbjct: 267 KGGRVGDAVDLFCK---MEGLGVFP-NVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVN 322
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+ LI+ + E+A + EM G PN N L+ A R+
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 505 FDKRFSFKPTTTTYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISWTILIDACGGSGN 563
F KR F P T N+L+ + K+ + ++ G++P+ ++T I+A G
Sbjct: 212 FSKRGVF-PCLKTCNLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGR 270
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V A+ + M G+ P+VV Y I +S R ++A + M ++ P++VTY
Sbjct: 271 VGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGV 330
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + E + L +M+ G
Sbjct: 331 LISGLMKLEMFEEANEVLV---EMYSMG 355
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 158/383 (41%), Gaps = 59/383 (15%)
Query: 257 YICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
Y C +++ G+C D S A + + L + + ++N+L+N +L+ +
Sbjct: 341 YTCSILLN--GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ + D +YN L+ C A AQ++ E ++ GV V T++T++
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME---MQDNGV-NPTVETFNTLIDA 454
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + V +M G+ PN +++ S++NA G + +A+ + ++M PN
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+Q N ++ A VE D+AF L
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKM--------------------------------- 541
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
K P+ TYN+L+K C + + ++N + L P+ +S
Sbjct: 542 --------------KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI AC GN++ AL + + M + G+ V Y I + RL + L+++M
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+ P+ + ++ A S+YG+
Sbjct: 648 QNNVVPSNAIHNIMVEAYSKYGN 670
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 24/337 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 159 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 215
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 216 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNV 275
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 276 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 324
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 325 ---LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P + T+ TL+ A R G L ++C V +M + G
Sbjct: 442 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENG 475
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS--GLCRAGRMGETSALLDEMASQKMVPD 304
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 305 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 362
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 363 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 421 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 481 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 523
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L+E++
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY-- 641
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 642 -LYQKMMQ 648
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 313
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 314 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 373
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 374 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 433
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 434 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 467
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 404
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 463
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 524 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 580
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 581 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 637
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 638 EMEYLYQKMMQNNVVPSNAIHNIMVEA 664
>gi|125558286|gb|EAZ03822.1| hypothetical protein OsI_25951 [Oryza sativa Indica Group]
Length = 1011
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/556 (21%), Positives = 227/556 (40%), Gaps = 110/556 (19%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKN-----ECQRLLDS---GEVEMFVGLMEVLEEFRL 186
+L+ + GVAP E+ + ++LK+ + L D+ G E VG ++ L
Sbjct: 169 LLRHMRARGVAPDEVSMSTFVRILKDVGRYSDAATLFDNWCNGRFE--VGFID------L 220
Query: 187 PVKELDE----EFRIVQLCVNKPDVNLA--IRYACIVPRADILFCNFVREFGKKRDLVSA 240
LD +F + ++C D A I+ +P+ + + + +GK L A
Sbjct: 221 DYSALDSGGPMQFLLEEMCHGNVDDAGASGIQGVARIPKLAVTYNTMIDLYGKAGKLKDA 280
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ + + + + T+I++ G CG+ ++ A++ + + ++ FN +M +
Sbjct: 281 MDMFMGMPDYGVAADTCTFNTLINIFGSCGNVKEAEALFASMIVRGTNPDVKTFNVMMTL 340
Query: 301 NAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACC----------------LAGNTVL 342
A D++ L+ Y ++ K+G+ AD SY I+L+ C +G V
Sbjct: 341 FASKGDVEGVLKHYYHIGKMGLSADTVSYGIVLRVLCERKMVHEAEDVIVGIMRSGTCVP 400
Query: 343 AQEIYGEVKHLEAKGVL-KLDVF-------------TYSTIVKVFADAKWWQMALKV--- 385
Q + +K +G+L K + F T++ I+ FA+ +W+ A V
Sbjct: 401 EQPLPVVMKMYIDQGLLDKANAFFDRHCRGDEVSSKTFAAIMDAFAERGFWEEAEHVFYS 460
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ G+ + ++ ++ A A ++ L E M ++G P+ N L+Q
Sbjct: 461 HRGVRRRGI----VEYNVMVKAYGAAKRYDRVSPLLEHMNESGISPDECTFNSLIQMFAT 516
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
RA +L L K + A
Sbjct: 517 GGYPQRAKKL-----LGKMKYA-------------------------------------- 533
Query: 506 DKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGN 563
FKP TY + +Y +A L NEM+ G+ PN + + +LID +G
Sbjct: 534 ----GFKPKCETYAAAITTLSRNYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQ 589
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+E AL +M E G++P+ + T+ IK ++ K+A L+ MK+ P++V +
Sbjct: 590 LEEALHYNNLMEESGIAPNQIVLTSLIKAYSKANCWKEAQDLYSRMKNMDGGPDIVASNS 649
Query: 624 LLRARSRYGSLHEVQQ 639
+L + G + +V++
Sbjct: 650 MLNLYANLGMVTKVKE 665
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 271 DYMKSRAIY--EDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN--MQKLGVMADMAS 326
+Y+ S AIY ++++ V N+ V+ L++ A + ++ N M++ G+ +
Sbjct: 552 NYLVSEAIYLYNEMKASGVEPNVVVYGVLIDTFAETGQLEEALHYNNLMEESGIAPNQIV 611
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
L+KA A AQ++Y +K+++ D+ ++++ ++A+ M KVK
Sbjct: 612 LTSLIKAYSKANCWKEAQDLYSRMKNMDGGP----DIVASNSMLNLYAN---LGMVTKVK 664
Query: 387 E--DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL----- 439
E D L + ++++S+I+ N GL+ +++ + ++ +G + N +
Sbjct: 665 EIFDCLRRNNQADDVSYTSMISLYKNMGLLNESVRVAHDLQNSGLLSDCASYNAVMACFV 724
Query: 440 ----LQACVEACQ-------------FDRAFRLFRSWTLSKTQVA-LGEDYDGNTDRISN 481
L+ C E Q F F + + ++ +V+ L Y+ N S
Sbjct: 725 AKGKLRECAELVQQMQEGNILPDASTFGMIFSIMKKIQIAPEEVSQLQSAYNDNRSSSS- 783
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTT----TYNILMK--ACCTDYYRVK 533
Q++ + H ++ + +++ KP T N+ K A C + +
Sbjct: 784 ------QAVIAFLFLIAGMHAAALNICEKY-MKPVLTIDQCACNVAFKVYASCGEVDKAF 836
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
+L +M +GL P+ ++ L G G G ++ + ++
Sbjct: 837 SLFMQMHELGLKPDTATYIHLTTCYGEYGMPGGKMKAIFLL 877
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 158/379 (41%), Gaps = 73/379 (19%)
Query: 128 RIDCVVGVLKKLNELGVAP--------LELFDGSGFKLLKNECQRLLDSGEVEMFVGLME 179
R D V +L+ +NE G++P +++F G+ ++LL G+++ + G
Sbjct: 484 RYDRVSPLLEHMNESGISPDECTFNSLIQMFATGGYP---QRAKKLL--GKMK-YAGFKP 537
Query: 180 VLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
E + + L + + + + ++ + + P +++ + F + L
Sbjct: 538 KCETYAAAITTLSRNYLVSEAIY----LYNEMKASGVEPNV-VVYGVLIDTFAETGQLEE 592
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE---------DLRSQNVTLN 290
AL + ++ +PN + ++I + +++ +Y D+ + N LN
Sbjct: 593 ALHYNNLMEESGIAPNQIVLTSLIKAYSKANCWKEAQDLYSRMKNMDGGPDIVASNSMLN 652
Query: 291 IY-----------VFNSLM-NVNAHDLKFT--LEVYKNM-------------QKLGVMAD 323
+Y +F+ L N A D+ +T + +YKNM Q G+++D
Sbjct: 653 LYANLGMVTKVKEIFDCLRRNNQADDVSYTSMISLYKNMGLLNESVRVAHDLQNSGLLSD 712
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
ASYN ++ AC +A + +E V+ ++ +L D T+ I F+ K Q+A
Sbjct: 713 CASYNAVM-ACFVAKGKL--RECAELVQQMQEGNILP-DASTFGMI---FSIMKKIQIAP 765
Query: 384 KVKEDMLSA------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
+ + SA + I + LI AG+ A+++ E+ ++ + CN
Sbjct: 766 EEVSQLQSAYNDNRSSSSQAVIAFLFLI-----AGMHAAALNICEKYMKPVLTIDQCACN 820
Query: 438 ILLQACVEACQFDRAFRLF 456
+ + + D+AF LF
Sbjct: 821 VAFKVYASCGEVDKAFSLF 839
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + M++ + D Y+I++ C G+ A ++ E +E KG K D+ Y
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE---MEIKG-FKADIIIY 285
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+++ F A W K+ DM+ +TP+ + +S+LI+ G + +A L +EM+Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ L+ + Q D+A + + M K
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHM-----------------------LDLMVSKG 382
Query: 487 KQSITNTPNFVPNSHYSS--------FDKRFSFKPT---TTTYNILMKACCT--DYYRVK 533
T N + N + + ++ S + T TYN L++ C K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L EM + + P+ +S+ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ ++ A+ LF + ++P++ TY ++ + GSL E
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 234/541 (43%), Gaps = 80/541 (14%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
++ + + L +GR+ E +V+ +V + ++++L + +G+ + G++ V
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMV----EMGHKPTLITLNALVNGLCLN---GKVSDAV 197
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ ++ E G P E+ G K++ C+ SG+ + + L+ +EE ++ + +
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVM---CK----SGQTALAMELLRKMEERKIKLDAVKY 250
Query: 194 EFRIVQLCVNKP---DVNLAIRYACIVPRADIL-FCNFVREF---GKKRDLVSALRAYDA 246
I LC + NL +ADI+ + +R F G+ D LR D
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR--DM 308
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K+ ++ P++ +ID G ++ +++++ + ++ + + SL++ +
Sbjct: 309 IKRKIT-PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + M G ++ ++NIL+ C A E++ + + +GV+ D
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF---RKMSLRGVVA-DTV 423
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T+++ F + ++A ++ ++M+S V P+ +++ L++ + G E+A+ +FE++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ E + NI++ A + D A+ LF S L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK---------------------- 521
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
KP TYNI++ C +A L +M
Sbjct: 522 -------------------------GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G SPN ++ ILI A G G+ + ++++ ++ G S D + + + RLK++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM-LSDGRLKKS 615
Query: 603 F 603
F
Sbjct: 616 F 616
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 159/396 (40%), Gaps = 40/396 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + N+Y + ++N L + KLG D +++ L+ CL G
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ + + K L T + +V A+ + + M+ G PN +T+
Sbjct: 161 ALELVDRMVEMGHKPTL----ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++ +G AM L +M + + ++ +I++ + D AF LF +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 463 K--------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------------- 500
T + G Y G D + + +D TP+ V S
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKL-LRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 501 ----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
H + S P T TY L+ C + KA +++ M + G PN ++ IL
Sbjct: 336 AEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ + ++ L++ + M G+ D V Y T I+ +L+ A LF+EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+P++V+Y LL G E ++ L +++ + K+
Sbjct: 454 RPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 51/268 (19%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S + V A K + + L + + M G+ N T S +IN C + A
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EP++ + L+ C+E + A L DR+
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 170
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M HK PT T N L+ C + A L++ M
Sbjct: 171 MGHK---------------------------PTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++ ++ SG A+++L+ M E + D V Y+ I + L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA 627
AF+LF EM+ + +++ Y TL+R
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 21/337 (6%)
Query: 287 VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
+TLN V +N D ++ M + G + +Y +LK C +G T LA E+
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLID---RMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
++ +E + + KLD YS I+ A + +M G + I +++LI
Sbjct: 235 ---LRKMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
AG + L +M++ P+ + L+ V+ + A L + Q
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QR 346
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
+ D T I +++ N H P T+NIL+ C
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKAN--------HMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 527 TDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
L +M G+ + +++ LI G +E A ++ + M + PD+V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+Y + + ++A +FE+++ +++ ++ Y
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 144/323 (44%), Gaps = 31/323 (9%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL---DVFTYSTI 369
+ M +LG M D SY ILLK C N A+E E+ H+ A + +V +YS +
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLC---NEKRAEEAL-ELLHMMADDHGRRCPPNVVSYSIV 205
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + +M+ G+ P+ +T++++I+ A L ++A +F++M+ G
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L+ + ++ ++ + A G D T S + + K
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMS------ARGLKPDCYT-YGSLLNYLCKNG 318
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV------- 542
F +S R KP +TY IL+ Y K ++EM +
Sbjct: 319 RCREARFFFDSMI-----RKGIKPKVSTYGILIHG-----YATKGALSEMHSFLDLMVEN 368
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GLSP+H + I A G ++ A+ I MR+ G+SP+VV Y I + R+ A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 603 FSLFEEMKHYQIQPNLVTYITLL 625
F +M + + PN+V + +L+
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLV 451
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 38/369 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V++ M G + +YN L+ G +E+ ++ + A+G LK D +TY +++
Sbjct: 256 VFQQMIDNGFKPNNYTYNCLIHGYLSIGKW---KEVVQMLEEMSARG-LKPDCYTYGSLL 311
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A + M+ G+ P T+ LI+ A G + + + M++ G
Sbjct: 312 NYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS 371
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHK 485
P+ NI A + D+A +F R LS V G D R+ + E K
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 486 DKQSITN--TPNFVPNSH------------------YSSFDKRFSFKPTTTTYNILMKAC 525
Q I TPN V + Y D+ P +N L+
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC--PNAVFFNTLICNL 489
Query: 526 CTDYYRV---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C + RV + L++ M VG+ P+ S+T LI +G + A ++ M G+SP
Sbjct: 490 C-NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T + + R+ A+ LF EM + P +VTY T+L + E ++
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE--- 605
Query: 643 VYQDMWKAG 651
+Y +M +G
Sbjct: 606 LYLNMINSG 614
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 162/399 (40%), Gaps = 55/399 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
+F F + K + A+ ++ ++H SPN+ +ID G + + +
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ VT NI VFNSL+ + E+ M G+ + +N L+ C G
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+ + + ++H+ GV + D F+Y+ ++ + A KV + M+S G++P +T
Sbjct: 496 MEGRRLIDLMEHV---GV-RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ +A ++ A LF EML+ G P N +L + +F A L+ +
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
S T+ + TYNI
Sbjct: 612 NSGTKCDI-----------------------------------------------YTYNI 624
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C +A + + + GL N I++TI+I A G E A+ + + +G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ P+VV Y + + L++ SLF M+ PN
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 723
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 167/416 (40%), Gaps = 51/416 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFT 308
PN Y +I G + + + E++ ++ + + Y + SL+N + +F
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF- 325
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ +M + G+ +++Y IL+ G E++ + + G L D ++
Sbjct: 326 --FFDSMIRKGIKPKVSTYGILIHGYATKGAL---SEMHSFLDLMVENG-LSPDHHIFNI 379
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+A A+ + M G++PN + + +LI+A G V+ A F +M+ G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW-------------TLSKTQVALGEDYDGN 475
PN N L+ +++RA L TL +G +G
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL 535
I MEH + P++ FS+ P + Y + + TD + +
Sbjct: 500 R-LIDLMEHVGVR---------PDA--------FSYTPLISGYCLTGR---TD--EAEKV 536
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ M ++GLSP +++ L+ + ++ A + + M G++P VV Y T + +
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+KR +A L+ M + + ++ TY +L + V + ++Q + G
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC---VDEAFKMFQSLCSKG 649
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 122/328 (37%), Gaps = 57/328 (17%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V ++ +Y+IL+ C G+ +G L K ++D + ++K K
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFG----LILKTGWRMDHIAINQLLKGLCHGKRV 141
Query: 380 QMALKVK-EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG---CEPNSQC 435
A+ V + M G P+T++++ L+ N E+A+ L M C PN
Sbjct: 142 GEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
+I++ Q D+ + LF +E D+
Sbjct: 202 YSIVINGFFTEGQVDKPYNLF-------------------------LEMIDR-------- 228
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTI 553
P TY ++ C + R + + +M G PN+ ++
Sbjct: 229 --------------GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNC 274
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI G + +Q+L+ M G+ PD Y + + ++ R ++A F+ M
Sbjct: 275 LIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+P + TY L+ + G+L E+ L
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFL 362
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACC 335
++ ++ + VT + +N++++ +F+ E+Y NM G D+ +YNI+L C
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC 630
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N V E + + L +KG L+L++ T++ ++ + A+ + + + G+
Sbjct: 631 -KSNCV--DEAFKMFQSLCSKG-LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 686
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
PN +T+ + G +E+ LF M + G PNSQ N L++ + RA
Sbjct: 687 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 478 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 774 YWTYCLLLK 782
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 183/434 (42%), Gaps = 59/434 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 241
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ +A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 242 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 302 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 358 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 417 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 444
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 445 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 548
Query: 638 QQCLAVYQDMWKAG 651
+++ M + G
Sbjct: 549 DNAFRLFEMMEQNG 562
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 172/421 (40%), Gaps = 53/421 (12%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 575 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 627
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 924
Query: 651 G 651
G
Sbjct: 925 G 925
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 181/452 (40%), Gaps = 80/452 (17%)
Query: 248 KKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAH 303
K+ SPN+ +I G+C G +R +++ + V ++ +N+++
Sbjct: 280 KRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLG 337
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ L++ + M+K G D +YN L+ C T A+E+ K V
Sbjct: 338 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----VKEGFTPTV 392
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSA------------------------------- 392
T++ ++ + A+ + AL++K M+S+
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452
Query: 393 ----GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+ V+ +
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKK 512
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+A L L+K Q DG + IT T FD
Sbjct: 513 LHKAMAL-----LTKMQ------KDGIIPNV----------ITYTTLLQGQCDEHDFDNA 551
Query: 509 F---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
F KP Y +L A C +A +R G++ + +T LID
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYYTTLIDGFS 610
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+GN + A +++ M ++G +PD Y+ + + KRL +A + ++M I+ +
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y L+ R G ++ +Y +M +G
Sbjct: 671 AYTILIDEMLREGKHDHAKR---MYNEMTSSG 699
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 167/435 (38%), Gaps = 78/435 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P I + ++ + D +A R ++ +++ P+ + + D G ++
Sbjct: 528 IIPNV-ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RA 583
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
Y + + V L + +L++ A + F + + M G D +Y++LL A
Sbjct: 584 EEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 334 -----------------------CCLAGNTVLAQEIYGEVKHLEAKGVL--------KLD 362
C + T+L E+ E KH AK + K
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
TY+ + + + A + M GV P+ +T++ LI+ C + G +++A +
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 423 EMLQAGCEPNSQCCNILLQ-------ACVEACQFDRAFRLFR---SWTLSKTQVALGEDY 472
M+ A CEPN +LL+ A V + + L +W L + V G +
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823
Query: 473 DGNT-----------DRISN----MEHKDKQSIT--------------NTPNFVPNSHYS 503
T R+ ++H + ++ +T F +
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883
Query: 504 SFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S F+P +Y +L+ C D+ +VK+L ++ +G + + ++W IL D +
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943
Query: 562 GNVEGALQILKIMRE 576
G V+ Q+L IM +
Sbjct: 944 GYVDICFQMLSIMEK 958
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 141/368 (38%), Gaps = 33/368 (8%)
Query: 296 SLMNVN--AHDLKFTLEVYKNMQKLG---VMADMASYNILLKACCLAGNTVLAQEIYGEV 350
S++N + A D++ + + + +++ G + YN L++ T +Y +
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQ- 173
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L G+L D TY+T++K + A + +L G+ P T T ++L+
Sbjct: 174 --LVQDGLLP-DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCR 230
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RS 458
G + +A LF M GC+ N IL+Q +A +A LF R+
Sbjct: 231 TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRA 290
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFK---- 512
+T + + M +T V S + K
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350
Query: 513 -----PTTTTYNILMKACCTDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
P TYN L+ C + L+N G +P +++T LI+ + +
Sbjct: 351 KNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++ M D+ + I ++ RLK+A L E+ + PN++TY +++
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 627 ARSRYGSL 634
+ G +
Sbjct: 471 GYCKSGKV 478
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 191/444 (43%), Gaps = 44/444 (9%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM- 298
AL ++ K +PN T++D G + ++ I++D S+ T +I ++N+++
Sbjct: 485 ALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMIC 544
Query: 299 -NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
L E++ M++LG D +Y L+ C GN V A ++ K + +
Sbjct: 545 GFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL----KDMSERD 600
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ Y++++ ++ Q + +M + ++PN +T+ SLI + G++++A
Sbjct: 601 GISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKA 660
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-------------SWTLSKT 464
+ + +M+ G PN + ++ + + D A + S L K+
Sbjct: 661 YNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKS 720
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY-NILMK 523
+ E T +I + K SI + N V N + K + ++L+K
Sbjct: 721 DLRHLE-----TQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLK 775
Query: 524 ACCTDYYRVKALM----------------NEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
C D Y +L+ ++M GL PN + + LI+ SGN++ A
Sbjct: 776 GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRA 835
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ + G+SP VV Y T I + R +A L ++M+ I P+ +TY TL+
Sbjct: 836 RRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
G + +Q + + +M KAG
Sbjct: 896 LYMEG---KSEQSVGLLNEMMKAG 916
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 55/348 (15%)
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +N+ ++ +V+ L++ A + L + M K+G+ + N L+ C G+
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+ +K LK D + Y+T++ F + + A K+ ++M + GV +
Sbjct: 412 VNKAAEVLVSMKDWN----LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVV 467
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + G VE A+H++ M + G PN LL A + FDRA +++
Sbjct: 468 TYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD- 526
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
LSK F + T YN
Sbjct: 527 ALSK----------------------------------------------GFTKSITLYN 540
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
++ C V+A + +M+ +G P+ I++ LID GN+ AL++ + D
Sbjct: 541 TMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERD 600
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G+S Y + I RS+ L++ L EMK+ ++ PN+VTY +L+
Sbjct: 601 GISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLI 648
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 145/351 (41%), Gaps = 55/351 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +NSL++ V+ D+ +V M + G+ + +Y +L+K C G A+++
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLI 349
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G + L +D Y ++ + A AL++++ ML G+ NT+ +SLIN
Sbjct: 350 GCMMEKN----LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G V +A + M +P+S N LL + F +AF+L
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKL------------ 453
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
D + N K +F T TYN L+K
Sbjct: 454 --------CDEMHN-------------------------KGVNF--TVVTYNTLLKNLFH 478
Query: 528 DYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ AL N M G++PN +++ L+DA G + A+ I K G + +
Sbjct: 479 VGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITL 538
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
Y T I + ++L QA +F +MK P+ +TY TL+ + G+L E
Sbjct: 539 YNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVE 589
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 163/393 (41%), Gaps = 66/393 (16%)
Query: 268 ICGDYMKSRAIYEDLRS--QNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
+C + + A++++L S + + + VF+ ++ V A KF L V+ NM K G +
Sbjct: 161 LCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPS 220
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ S N LL G A +Y + + A G+L D+F+Y+ +V + A
Sbjct: 221 LRSCNSLLSNLVQNGEAFKALLVY---EQMIALGILP-DIFSYTIMVNAYCKEGRVDEAF 276
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++M + PN +T++SLI+ + G V A + M + G NS+ +L++
Sbjct: 277 NFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGY 336
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ Q ++A +L I M K N + H
Sbjct: 337 CKRGQMEQAEKL-----------------------IGCMMEK---------NLFVDEH-- 362
Query: 504 SFDKRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
Y +L+ A CT D R++ + M VGL N + LI+
Sbjct: 363 -------------VYGVLIHAYCTAGRVDDALRIR---DAMLKVGLKMNTVICNSLINGY 406
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+V A ++L M++ + PD Y T + + + +AF L +EM + + +
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TLL+ G V+ L ++ M K G
Sbjct: 467 VTYNTLLKNLFHVG---HVEHALHIWNLMHKRG 496
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 20/320 (6%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ +N + NSL+N + EV +M+ + D YN LL C + + A
Sbjct: 392 LKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAF 451
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++ E+ + KGV V TY+T++K + AL + M GV PN +T+ +L
Sbjct: 452 KLCDEMHN---KGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
++A G ++AM ++++ L G + N ++ C F + +L ++ +
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMI------CGFCKMEKLVQAQEIFLK 561
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
LG D T R N V +R +T YN L+
Sbjct: 562 MKELGFPPDEITYRTL------IDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITG 615
Query: 525 C--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ ++ L+ EM+ LSPN +++ LI G ++ A M + G++P+
Sbjct: 616 VFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675
Query: 583 VVAYTTAIKVCVRSKRLKQA 602
++ + + R ++ +A
Sbjct: 676 IIIGSKIVSSLYRHGKIDEA 695
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 155/389 (39%), Gaps = 25/389 (6%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNM 315
+ R ++ G G ++ + ++RS + L + N ++ V F +V+ M
Sbjct: 105 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 164
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+ GV D S+ L+ CC G +E+ + + G LD T + +V+ +
Sbjct: 165 TRAGVCPDERSFRALVVVCCREGKV---EEVDALLAAMWRYG-FSLDNATCTVVVRSLCE 220
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
++ + ML G PN + +++ I+ V+QA H+ EEM+ G +PN
Sbjct: 221 KGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 280
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHKDKQSITN 492
L+ + +RAFRLF S + Y G R + + +
Sbjct: 281 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 340
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHIS 550
KP T TY L+ C + R LMN+M+ G PN +
Sbjct: 341 VEQ--------------GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 386
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ +ID G ++ A ++L++ G+ D + YT I + + A LF+ M
Sbjct: 387 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 446
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
P++ Y +L+ + + E Q+
Sbjct: 447 ENGCCPDIEAYTSLISTYCQQRQMEESQK 475
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 15/286 (5%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L L V T + +++V + + A KV + M AGV P+ ++ +L+ C G VE+
Sbjct: 134 LPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVD 193
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L M + G ++ C +++++ E +F FR T + +Y D
Sbjct: 194 ALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNV-VNYTAWIDG 252
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--- 535
+ + KQ+ V KP T+ L+ C + +A
Sbjct: 253 LCKRRYV-KQAFHVLEEMVGRG----------LKPNVYTHTTLIDGLCKIGWTERAFRLF 301
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ +++ PN ++T++I G + A +L M E G+ P+ YTT I +
Sbjct: 302 LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCK 361
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+AF L +MK PN+ TY ++ + G + E + L
Sbjct: 362 GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 407
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEV 311
PN T+I G C G + ++ + ++ + NIY +N++++ K E
Sbjct: 347 PNTNTYTTLIG--GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ-EA 403
Query: 312 YKNMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
YK ++ G+ D +Y IL+ C G+ A +++ + G D+ Y++
Sbjct: 404 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF---DRMVENGCCP-DIEAYTS 459
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + + + K + L G+ P T++S+I G A+ +FE M+Q G
Sbjct: 460 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519
Query: 429 CEPNS--QCCNILLQA 442
C +S C N ++ A
Sbjct: 520 CFADSILMCSNNVVSA 535
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
PN++ +I G C G ++ + + Q + N + +L+ + F
Sbjct: 312 PNVHTYTVMIG--GYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 369
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+ M++ G + ++ +YN ++ C G QE Y ++ ++G LK D TY+ +
Sbjct: 370 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI---QEAYKVLRMATSQG-LKFDKITYTIL 425
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ AL + + M+ G P+ ++SLI+ +E++ F++ L G
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF 456
P Q ++ + + A R+F
Sbjct: 486 LPTKQTYTSMIAGYCKVGRSTMALRVF 512
>gi|18642701|gb|AAL76193.1|AC092173_5 Putative crp1 protein [Oryza sativa Japonica Group]
Length = 1089
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 461 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 514
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 515 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 575 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 631
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 632 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 674
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 675 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 735 QLFEEIKSIKLMPTVSMMNALITA 758
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 404 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 463
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 464 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 523
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 524 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 583
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 584 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 643
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 644 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 703
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 704 DARAKGYQVG-----------------------------------------------TIA 716
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 717 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 777 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 828
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 458 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 517
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 518 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 557
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 627 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 681 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 740
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 741 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 797 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 853
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 417 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 472
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 473 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 526
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 527 -----------------------------------------IEPNVNTYSALIDGCAKAG 545
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 546 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 605
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 606 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDL---GF 662
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 663 ALKIYEDMNKIG 674
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 61/360 (16%)
Query: 273 MKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYN 328
MK AI +E + +++ L+N A D +VYK M ++GV A++ YN
Sbjct: 145 MKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYN 204
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
+L+ ACC +G+ A + E +E+K V D+FTY+T++ ++ AL V++
Sbjct: 205 VLIHACCKSGDVEKADNLLSE---MESKCVFP-DLFTYNTLISLYCKKGMHYEALSVQDR 260
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G+ P+ +T++SLI+ G + +AM LF+E+ A PN L+
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLND 318
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D+A RL E + Q +
Sbjct: 319 LDQALRL--------------------------REEMEAQGLY----------------- 335
Query: 509 FSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
PT TYN +++ C + R++ L+NEM + P++++ LI+A G+++
Sbjct: 336 ----PTVVTYNSILRKLC-EIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMK 390
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M E G+ D Y I + + + A L M P+ TY L+
Sbjct: 391 SALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLV 450
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+S +V V+A+ K Q A++V E M+ G P+ + L+N+ A L + ++++M
Sbjct: 133 FSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMA 192
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G E N N+L+ AC ++ ++A L +++ + + NT IS K
Sbjct: 193 RIGVEANIHVYNVLIHACCKSGDVEKADNLLSE---MESKCVFPDLFTYNT-LISLYCKK 248
Query: 486 DKQSITNTPNFVPNSHYSSFD-----KRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
HY + +R KP TYN L+ C + +A L E
Sbjct: 249 -------------GMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE 295
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+R +PNH+++T LID +++ AL++ + M G+ P VV Y + ++ R
Sbjct: 296 IRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGR 353
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A L EM +I+P+ VT TL+ A + G +++ L V M +AG
Sbjct: 354 IRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIG---DMKSALKVKNRMVEAG 403
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 155/374 (41%), Gaps = 22/374 (5%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD-LKF-TLEVY 312
N+++ +I C GD K+ + ++ S+ V +++ +N+L+++ + + L V
Sbjct: 199 NIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQ 258
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M++ G+ D+ +YN L+ C G A ++ E++ V TY+T++
Sbjct: 259 DRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHV------TYTTLIDG 312
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ AL+++E+M + G+ P +T++S++ G + A L EM + EP+
Sbjct: 313 YCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPD 372
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+ CN L+ A + A + + V G D T + + +
Sbjct: 373 NVTCNTLINAYCKIGDMKSALK------VKNRMVEAGLKLDQFTYKALIHGFCKIREMDG 426
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHIS 550
+ S D FS P+ TY+ L+ C V L +E GL +
Sbjct: 427 AKELL----LSMLDAGFS--PSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI V+ A +I +M+E G D V YT+ + + A L +EM
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540
Query: 611 HYQIQPNLVTYITL 624
++ L Y L
Sbjct: 541 KRRLMITLKIYRAL 554
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 219 RADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKS 275
+ DI+ N + F K+ + A+R + + ++PN T+ID G C D ++
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTTLID--GYCRLNDLDQA 322
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ E++ +Q + + +NS++ ++ ++ M + + D + N L+ A
Sbjct: 323 LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINA 382
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C G+ A + VK+ + LKLD FTY ++ F + A ++ ML AG
Sbjct: 383 YCKIGDMKSALK----VKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAG 438
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+P+ T+S L++ N E + L +E ++ G + L++ + Q D A
Sbjct: 439 FSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAK 498
Query: 454 RLFRSWTLSKTQVALGE 470
++F +L + + LG+
Sbjct: 499 KIF---SLMQEKGTLGD 512
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 36/368 (9%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMA 325
GD + +++++ ++ +T +I +NSL++ + D F L ++ M+ +G D+
Sbjct: 266 GDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCL--FEEMKDVGCEPDVI 323
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C A E+K+ LK +V TYST++ Q A+K
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKN----SGLKPNVVTYSTLIDALCKEHMLQQAIKF 379
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G++PN T++SLI+A AG + A+ L +EMLQ N LL +
Sbjct: 380 LLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCK 439
Query: 446 ACQFDRAFRLFRSWTLS------KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ A LFR+ + KT AL + N R+ N K+
Sbjct: 440 EGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK-RVENALELLKEIKEKKI----- 493
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
KP Y ++ C+ + +M+EM+ G+ N + +TI +DA
Sbjct: 494 ------------KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDA 541
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+G AL +L+ M + G+ +V + I + +++A F M + +QPN
Sbjct: 542 YFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN 601
Query: 618 LVTYITLL 625
V T L
Sbjct: 602 NVAVCTAL 609
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 166/417 (39%), Gaps = 106/417 (25%)
Query: 227 FVREFGKKRDLVSALRAYDA--SKKHLSSP---------NMYICRTIIDVCGICGDYMKS 275
F++E R ++ ++ S +++ P +++I +++ G C M
Sbjct: 151 FLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTR 210
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ RS N L L DL + + +++M G+ + +YNI++ C
Sbjct: 211 FRVFPKARSCNAFLY-----RLAKTGKGDL--SNKFFRDMVGAGIAQSVFTYNIMIGYMC 263
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ V A+ ++ ++K + G+T
Sbjct: 264 KEGDMVTAKSLFHQMKQM---------------------------------------GLT 284
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T++SLI+ GL++++ LFEEM GCEP+ N L+ + Q +AF
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
H+ K S KP
Sbjct: 345 L---------------------------HEMKNS--------------------GLKPNV 357
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TY+ L+ A C ++ +A+ + +MR VGLSPN ++T LIDA +G + AL++
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M + + +VV YTT + + R+ +A LF M + PNL TY L+ +
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIK 474
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + G++E+A F M + P ++ CN L + + D + +
Sbjct: 179 VPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNK 238
Query: 455 LFR-------SWTLSKTQVALGED-YDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSF 505
FR + ++ + +G +G+ ++ H+ KQ + TP+ V NS +
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQ-MGLTPDIVTYNSLIDGY 297
Query: 506 ------DKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
D+ F +P TYN L+ C KA ++EM+ GL PN
Sbjct: 298 GKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNV 357
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++++ LIDA ++ A++ L MR G+SP+ YT+ I ++ L A L +E
Sbjct: 358 VTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADE 417
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M Q+ N+VTY TLL + G + E + +++ M KAG
Sbjct: 418 MLQVQVGFNVVTYTTLLDGLCKEGRMMEAED---LFRAMIKAG 457
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 29/415 (6%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVT 288
F K + A K PN+ T+ID +C ++M +AI D+R ++
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID--ALCKEHMLQQAIKFLLDMRRVGLS 389
Query: 289 LNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N + + SL++ N A L L++ M ++ V ++ +Y LL C G + A+++
Sbjct: 390 PNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDL 449
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + LK TY+ +V K + AL++ +++ + P+ + + ++I
Sbjct: 450 FRAMIKAGVTPNLK----TYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIW 505
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSK 463
+ +E+ + EM G NS I + A + + A L + +
Sbjct: 506 GLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEV 565
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
T V DG + E D + N PN+ L+
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN--------------VAVCTALID 611
Query: 524 ACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + Y K L +EM+ + P+ I++T LID + + AL I M E GM
Sbjct: 612 GLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMEL 671
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
D+ AYT+ + + ++QA EM I P+ + I LLR GS+ E
Sbjct: 672 DLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDE 726
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+ ++ K +Q AL ++ M G+ + ++SL+ + LV+QA
Sbjct: 637 DKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFL 696
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
EM+ G P+ C LL+ E D A L
Sbjct: 697 NEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 180/395 (45%), Gaps = 31/395 (7%)
Query: 270 GDYMKSRAIYEDLR-SQNVTL---NIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
G +++ I+ D++ + + L NI FN ++ + L+ + ++M++ G + +
Sbjct: 270 GKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLME 329
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ SYNI L G + AQ +K + KG+ + ++++++T++ A
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQL---ALKEMVDKGI-EPNIYSFNTVMDGLCKNGLISDAR 385
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ M+S+G+ P+T+T+S+L++ C + G V +A ++ EM++ GC PN+ CNILL +
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445
Query: 444 VEACQFDRAFRLF-----RSWTLSKTQVALGED-------YDGNTDRISNMEHKDKQSIT 491
+ + A +L RS+ L + D D + + M ++
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALG 505
Query: 492 NTPN-FVPNSHYSSFDKRFSFKPTTTTYNILMKACCT----DYYRVKALMNEMRTVGLSP 546
N N F+ SS K+ P TY+I++ C D R K + EM L P
Sbjct: 506 NLGNSFIGLVDSSSNGKKCL--PDLITYSIIINGLCKAGRLDEARKKFI--EMVGKSLHP 561
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + I + G + A ++LK M + G + + Y + I ++ + + L
Sbjct: 562 DSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLL 621
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++MK I PN+ TY ++ G + + L
Sbjct: 622 DDMKEKGITPNICTYNNMISCLCEGGRIKDATSLL 656
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 22/371 (5%)
Query: 279 YEDLRSQNVTLN---IYVFNSLMNVNAHDLK---FTLEVYKNMQKLGVMADMASYNILLK 332
++ RSQ V N +Y++N ++ + + K F+ +YK+M GV + + N+L+
Sbjct: 102 FQSFRSQ-VPANPPPVYLYNMVLESSLREDKVDSFSW-LYKDMVVAGVSPETYTLNLLIA 159
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C +G A+E++ + + KG + + F++ +V+ + A AL++ + M S
Sbjct: 160 GLCDSGRFEDAREVFDK---MGVKGC-RPNEFSFGILVRGYCRAGLSMRALELLDGMGSF 215
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
GV PN + +++LI++ G E+A L E M + G P+ N + A A + A
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA 275
Query: 453 FRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
R+FR + + LG T +E K+ + + S KR
Sbjct: 276 SRIFRDMQIDE---ELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM-----KRNGNL 327
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
+YNI + + ++A + EM G+ PN S+ ++D +G + A I
Sbjct: 328 MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ +M G+ PD V Y+T + C + ++ +A ++ EM PN T LL + +
Sbjct: 388 MGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447
Query: 631 YGSLHEVQQCL 641
G + E ++ L
Sbjct: 448 EGRIFEAEKLL 458
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/452 (19%), Positives = 174/452 (38%), Gaps = 70/452 (15%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASK--------KHLSSPNMYICRTIIDVCGICG 270
R D LF + V + L SA + +AS+ + L P I + + G C
Sbjct: 248 REDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCK 307
Query: 271 DYM--KSRAIYEDL-RSQNV----TLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMAD 323
+ M +++ + E + R+ N+ + NI++ + N + + L K M G+ +
Sbjct: 308 EGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL---KEMVDKGIEPN 364
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ S+N ++ C G A+ I G L + D TYST++ A
Sbjct: 365 IYSFNTVMDGLCKNGLISDARMIMG----LMISSGIGPDTVTYSTLLHGCCSTGKVLKAN 420
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +M+ G +PNT T + L+++ G + +A L ++M + + ++ CNI++
Sbjct: 421 NILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGL 480
Query: 444 VEACQFDRAFRLFRS-WTLSKTQVA-LGEDYDGNTDRISNMEHKDKQSITNT---PNFVP 498
++ + D A + W + LG + G D SN + IT +
Sbjct: 481 CKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCK 540
Query: 499 NSHYSSFDKRF------SFKPTTTTYNILMKACC-------------------------- 526
K+F S P + Y+ + + C
Sbjct: 541 AGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQT 600
Query: 527 -----------TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+ + L+++M+ G++PN ++ +I G ++ A +L M
Sbjct: 601 YNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEML 660
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ G+SP++ ++ IK ++ +FE
Sbjct: 661 QKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 34/271 (12%)
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+DM+ AGV+P T T + LI ++G E A +F++M GC PN IL++ A
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSS 504
RA L D + + + + I NT +F
Sbjct: 200 GLSMRALELL--------------------DGMGSFGVQPNKVIYNTLISSFCREGRNEE 239
Query: 505 FDKRF------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLS-PNHISWT 552
++ P T+N + A C+ + R+ M +GL PN ++
Sbjct: 240 AERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFN 299
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
++++ G +E A +++ M+ +G ++ +Y + VR+ +L +A +EM
Sbjct: 300 LMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDK 359
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
I+PN+ ++ T++ + G + + + + +
Sbjct: 360 GIEPNIYSFNTVMDGLCKNGLISDARMIMGL 390
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 513 PTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T T N+L+ C + + + ++M G PN S+ IL+ +G AL++
Sbjct: 149 PETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL 208
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M G+ P+ V Y T I R R ++A L E M+ + P++VT+ + + A
Sbjct: 209 LDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS 268
Query: 631 YGSLHEVQQCLAVYQDM 647
G + E + +++DM
Sbjct: 269 AGKILEASR---IFRDM 282
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 36/243 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ F+ F K + SA R +K + ++ ++I G + + +D
Sbjct: 564 IIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ + +T NI +N++++ +K + M + G+ +++S+ +L+KA C A +
Sbjct: 624 MKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683
Query: 340 TVLAQEIY------------------------GEVKHLEAKGV--------LKLDVFTYS 367
+ +E++ GEV EAK + L F Y+
Sbjct: 684 FGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVS--EAKELFDAALDRCFDLGNFQYN 741
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ + + A + M+ G + ++ +I+ G A L E M+
Sbjct: 742 DLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDM 801
Query: 428 GCE 430
E
Sbjct: 802 ASE 804
>gi|222612526|gb|EEE50658.1| hypothetical protein OsJ_30888 [Oryza sativa Japonica Group]
Length = 869
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 14/308 (4%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 241 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 294
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 295 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 354
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
AC E+ RAF + T ++ + + + + K I
Sbjct: 355 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALM---KTCIQAGQADRAREV 411
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
Y + ++ K T Y I +++C D + +M +G+ P+ + + L+D G
Sbjct: 412 YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAG 470
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + A +I+K R G +AY++ + C +K K+A LFEE+K ++ P +
Sbjct: 471 HARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVS 530
Query: 620 TYITLLRA 627
L+ A
Sbjct: 531 MMNALITA 538
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 184 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 243
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 244 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 303
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 304 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 363
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 364 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 423
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 424 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 483
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 484 DARAKGYQVG-----------------------------------------------TIA 496
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 497 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 556
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 557 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 608
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 238 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 297
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 298 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 337
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 407 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 460
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 461 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 520
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 521 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 576
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 577 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 633
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 197 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 252
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 253 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 306
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 307 -----------------------------------------IEPNVNTYSALIDGCAKAG 325
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 326 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 385
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 386 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFA-- 443
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 444 -LKIYEDMNKIG 454
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M +G+ D +YN LL C N A+EI+GE+ +GV+ D+ ++S+++ VF+
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR---QGVVP-DLVSFSSLMAVFS 117
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
+ AL DM G+ P+ + ++ L++ C N ++E A+ + +EML+ GC +
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDV 176
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N +L + A +LF + AL + Y + + H Q T
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMV---ERGALPDFY-----TFTTLIHGHCQDGNMT 228
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISW 551
S + + +R + KP YN L+ C + + L + M + + PNHI++
Sbjct: 229 KAL---SLFGTMTQR-NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITY 284
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILI+A G+V A ++ +M E G+ P +V T IK RS +A M
Sbjct: 285 GILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Query: 612 YQIQPNLVTYITLLRARSR 630
+ P+ ++Y TL+ R
Sbjct: 345 KGVAPDHISYNTLINDGKR 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 33/336 (9%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
M +YN L+ A C G L +E + + + KG LK +FTY+ I+ + A
Sbjct: 1 MVTYNTLIGAYCREG---LLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAK 56
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
+ +ML+ G++P+T T+++L+ +A +F EML+ G P+ + L+
Sbjct: 57 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVF 116
Query: 444 VEACQFDRA---FRLFRSWTLSKTQV---ALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
D+A FR + + L V L Y N + + ++ +D+
Sbjct: 117 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML-------- 168
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
D YN ++ C + A L +EM G P+ ++T LI
Sbjct: 169 --EQGCVLD--------VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 218
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
GN+ AL + M + + PD+VAY T I + +++A L++ M +I
Sbjct: 219 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 278
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN +TY L+ A Y S+ V + ++ M + G
Sbjct: 279 PNHITYGILINA---YCSVGHVSEAFRLWDVMIEKG 311
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
+VP + F + + F + R L AL + KK P+ I ++ G C G+ +
Sbjct: 102 VVPDL-VSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH--GYCRNGNML 158
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
++ I +++ Q L++ +N+++N + T +++ M + G + D ++ L+
Sbjct: 159 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 218
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C GN A ++G + +K D+ Y+T++ F + A ++ + M+S
Sbjct: 219 HGHCQDGNMTKALSLFGTMTQRN----IKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ PN IT+ LINA + G V +A L++ M++ G +P CN +++
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 325
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 152/379 (40%), Gaps = 65/379 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++R V N+Y +N L+ + + ++ M + G D S+ ++ C
Sbjct: 144 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 203
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGV 394
G A+ E ++A +Y+ +V + + W++ V +M+ G+
Sbjct: 204 KLGRVEEARGFLAETVPVQA---------SYNAVVHALCGEFRMWEV-FSVVNEMVQRGL 253
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++++++A A + A + M+ GC PN L++ E + A
Sbjct: 254 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALS 313
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
++ W + + + P+
Sbjct: 314 MWH-WMVDE----------------------------------------------GWAPS 326
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +YN+L++ C D N M+ L PN +++ L+D +G+++GA+ I
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G P+VV YT I V + QA SL ++M PN VT+ TL+ R
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI---GRLC 443
Query: 633 SLHEVQQCLAVYQDMWKAG 651
V + L V+ M + G
Sbjct: 444 DCGRVGRALNVFHGMRRNG 462
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 32/384 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ TI+D + + AI + S T N+ F +L+ D K L +
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 314
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G SYN+L++ C G+ A + + +K + L + TYST+V
Sbjct: 315 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK----RNALLPNATTYSTLVD 370
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++A A+ + +M S+G PN + ++++I+ + +QA L ++ML C P
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 430
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSI 490
N+ N L+ + + RA +F + DR N + H
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH---------PNDRTYNELLHGL---- 477
Query: 491 TNTPNFVPNSHYSSFDKRF-----SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F +H +F F+ + TYN ++ C R A L+ M G
Sbjct: 478 -----FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 532
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ +I A G V A +L M +VVAYT I +L A
Sbjct: 533 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 592
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
+M + I PN T+ L+RA
Sbjct: 593 VYLLKMLYEGICPNEATWNVLVRA 616
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
++P A + V F DL A+ ++ K PN+ + +IDV +C M
Sbjct: 358 LLPNATT-YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV--LCKKMMFD 414
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++ + + N N FN+L+ + + L V+ M++ G + +YN LL
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN ++ + V + G +L + TY+T++ + A+ + M+
Sbjct: 475 HGLFREGNH---KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 530
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ P+ T++++I+A G V A L +M C N IL+
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 579
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN L+ A + V + + MR G+ PN ++ +LI A + V+ A ++
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---------------------------- 602
L M G PD V++ T + + R+++A
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 239
Query: 603 --FSLFEEMKHYQIQPNLVTYITLLRA 627
FS+ EM +QPN+VTY T++ A
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDA 266
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 56/336 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V M+ G ++ +YN+++ C G A+EI + L + G + D+ +Y+T
Sbjct: 207 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI---LNRLSSYG-FQPDIVSYTT 262
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A+ W + +M+ PN +T+ L+ G+VE+A+ + ++M Q G
Sbjct: 263 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 322
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN+ CNI++ A + + D A+ D ++NM
Sbjct: 323 CTPNTTLCNIVINAICKQGRVDDAY-----------------------DFLNNM------ 353
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSP 546
+ P T +Y +++ C + K L+ EM P
Sbjct: 354 ------------------GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 395
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ I G +E A++++++M E G S +V Y + R+ A LF
Sbjct: 396 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 455
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ +PN +TY TLL L + LA
Sbjct: 456 NNLP---CEPNTITYTTLLTGLCHAERLDAAAELLA 488
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 142/331 (42%), Gaps = 41/331 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G + NI++ A C G + Y + ++ G D +Y+T
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGR---VDDAYDFLNNMGMYGC-NPDTISYTT 367
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ A W+ A ++ +M+ PN +T+++ I GL+EQA+ L E M + G
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427
Query: 429 CEPNSQCCNILLQA-CVEACQFDRAFRLFR---------SWTLSKTQVALGEDYDGNTDR 478
C N L+ CV+ + D A LF ++T T + E D +
Sbjct: 428 CSVGIVTYNALVHGFCVQG-RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 486
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
++ M KD T+N+L+ C + +A L+
Sbjct: 487 LAEMIQKD------------------------CPLNAVTFNVLVSFFCQKGFVEEAMELV 522
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
N+M G +PN I++ L+D N E AL++L + G+S D + Y++ + V R
Sbjct: 523 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 582
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
R ++A + ++ ++P + Y +L A
Sbjct: 583 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 161/400 (40%), Gaps = 40/400 (10%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R++ T NI +N ++N + + E+ + G D+ SY +LK C
Sbjct: 209 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 268
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDV---FTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A + +VK L A+ V K V T+ +V+ F + A++V + M
Sbjct: 269 -------AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQH 321
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPNT + +INA G V+ A M GC P++ +L+ A +++ A
Sbjct: 322 GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHA 381
Query: 453 FRL---------------FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN----T 493
L F ++ Q L E + + E+ I
Sbjct: 382 KELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP--EYGCSVGIVTYNALV 439
Query: 494 PNFVPNSHYSSFDKRFS---FKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPN 547
F S + F+ +P T TY L+ C R+ A L+ EM N
Sbjct: 440 HGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLC-HAERLDAAAELLAEMIQKDCPLN 498
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ +L+ G VE A++++ M E G +P+++ + T + + ++A L
Sbjct: 499 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 558
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+ + + +TY +++ SR E Q L QDM
Sbjct: 559 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 512 KPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P+ TY +L++A C + + +++EMR G +PN +++ ++I+ G V+ A +
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL + G PD+V+YTT +K ++R LF EM + PN VT+ L+R
Sbjct: 244 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
R G V++ + V Q M + G
Sbjct: 304 RGGM---VERAIQVLQQMSQHG 322
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 51/256 (19%)
Query: 389 MLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
ML G P+ +T++ L+ A C ++G E AM++ +EM GC PN N+++
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGE-AMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A + +R+S+
Sbjct: 237 RVDDAKEIL--------------------NRLSS-------------------------- 250
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P +Y ++K C + VK L EM PN +++ +L+ G VE
Sbjct: 251 -YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+Q+L+ M + G +P+ I + R+ A+ M Y P+ ++Y T+L
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369
Query: 626 RARSRYGSLHEVQQCL 641
R R G ++ L
Sbjct: 370 RGLCRAGRWEHAKELL 385
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 49/265 (18%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V TY+ +++ + + A+ V ++M + G TPN +T++ +IN G V+ A +
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+ G +P+ +L+ A ++D LF
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF-------------------------A 281
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
E DK+ + P T+++L++ C R ++ +M
Sbjct: 282 EMVDKKCV----------------------PNEVTFDMLVRFFCRGGMVERAIQVLQQMS 319
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G +PN I+I+A G V+ A L M G +PD ++YTT ++ R+ R +
Sbjct: 320 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 379
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLL 625
A L EM PN VT+ T +
Sbjct: 380 HAKELLPEMVRKNCPPNEVTFNTFI 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 157/399 (39%), Gaps = 60/399 (15%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIID-VC------------- 266
++ F VR F + + A++ +H +PN +C +I+ +C
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351
Query: 267 -------------------GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
G+C G + ++ + ++ +N N FN+ + +
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ +++ + M + G + +YN L+ C+ G A E++ + + +
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-------CEPNT 464
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ A+ A ++ +M+ N +T++ L++ G VE+AM L +
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNM 482
M++ GC PN N LL + C + A L L V+L Y D +S
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG--LVSKGVSLDTITYSSVVDVLSR- 581
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMR 540
E + +++I + +P YN ++ A C +A+ M
Sbjct: 582 EDRTEEAI----------QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 631
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ G PN ++ ILI+ G ++ A +L + G+
Sbjct: 632 SNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGAL--QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ + T + G S EG+ M + G P VV YT ++ +S +A
Sbjct: 148 PSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 207
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ +EM+ PN+VTY ++ R G + + ++ L
Sbjct: 208 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 245
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 146/343 (42%), Gaps = 23/343 (6%)
Query: 299 NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
++ A DL F L K G+ A+ + N LL C GN +E++ K + +G+
Sbjct: 467 HLEAIDLWFRLA-----DKKGLAANTTTSNALLYGLCERGN---MEEVFPVCKEMVERGL 518
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ LD +Y+T++ + + A K+KE M+ G P+T T++ L+ A+ G ++
Sbjct: 519 V-LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ E G PN ++L+ A + D A LF +K +++ Y
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELS----YVVYNIL 633
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN-ILMKACCTDYYR-VKALM 536
I+ + + NF + + PT TY+ I+ CC D K +
Sbjct: 634 IA--------AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIF 685
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR GL PN +T LI G ++ IL+ M + + P+ + YT I +
Sbjct: 686 EEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKM 745
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
K+A L EM I P+ VTY L + + L E Q
Sbjct: 746 GNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 175/407 (42%), Gaps = 39/407 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ C ++ + KS +++ + V +++Y + + +N K + +
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 263
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV+ ++ +YN L+ C +G L + + + + +E K + + TY +V
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGR--LEEALMFKGRMVENK--VNPSLVTYGILVN 319
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A V +M S G +PN +++LI+ + G ++ A+ + ++M G +P
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N+ N LLQ Q ++A ++ + LS N D S + H +S
Sbjct: 380 NAVTHNTLLQGFCRTNQMEQAEQVLE-YLLSNVLSV-------NEDACSYVLHLLCKS-- 429
Query: 492 NTPNFVPNSHYSSFDKRF---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
S FD + K + +L+ C ++A+ R
Sbjct: 430 -----------SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLA 478
Query: 543 ---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL+ N + L+ GN+E + K M E G+ D ++Y T I C +S ++
Sbjct: 479 DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKI 538
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++AF L E+M +P+ TY L++ + G + +V + L +D
Sbjct: 539 EEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L +M G+ PN +++ LID SG +E AL M E+ ++P +V Y +
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
V+ ++ +A S+ EM PN + L+ SR G++ + L V DM G
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDA---LRVRDDMTLKG 376
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ P+ S L+ + S + + ++ M G+ DV Y TAI + ++ +A
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
LF +M + PN+VTY L+ + G L E
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEE 294
>gi|414586026|tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea mays]
Length = 549
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 138/333 (41%), Gaps = 56/333 (16%)
Query: 308 TLEVYKNMQKLGVMADMASYNILLK--ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V M GVM D A+ +L+ AC L Y V+ + A GV LDV T
Sbjct: 117 ALAVLNAMATDGVMPDAAACTVLVGVYACRLH----WFDAAYEVVRWMTANGV-ALDVVT 171
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YST++ A AL V + ML G PN T++ +++A +G++ +A L E M+
Sbjct: 172 YSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELLETMI 231
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
AG P++ N+L++A +AC F+ L +E
Sbjct: 232 AAGFAPSTATYNVLVEALCKACAFNEVDAL--------------------------LEES 265
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVG 543
+ T P T TY+ M C D ++ AL+++M +VG
Sbjct: 266 SAKGWT---------------------PDTITYSTYMDGLCKDGRVHKSFALVDKMLSVG 304
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN I+ IL+D A +L+ E G +VV Y T ++ +R
Sbjct: 305 LRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLSVV 364
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
LF ++ I PN T ++ + + G LHE
Sbjct: 365 KLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHE 397
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 534 ALMNEMRTVGLSPNHISWTILID--ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A++N M T G+ P+ + T+L+ AC + A ++++ M +G++ DVV Y+T I
Sbjct: 119 AVLNAMATDGVMPDAAACTVLVGVYACRLHW-FDAAYEVVRWMTANGVALDVVTYSTLIS 177
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ R+ +A + + M QPN TY +L A G +HE ++ L
Sbjct: 178 GLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELL 227
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G++ + ++++ LI +G V AL +L +M E+G P+ YT + S
Sbjct: 160 MTANGVALDVVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGM 219
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +A L E M P+ TY L+ A + + +EV L
Sbjct: 220 IHEAKELLETMIAAGFAPSTATYNVLVEALCKACAFNEVDALL 262
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 23/320 (7%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ M + G +D+ +YN+++ C G A + + AKG + DVFT++T
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI---AKGYVP-DVFTFNT 466
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + +++ M S GVTP+ IT++S++N + A E M FE M++ G
Sbjct: 467 LIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG 526
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
C PN NIL ++ +A + + A L + ++ V+ G + N + K
Sbjct: 527 CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN---NGDLK 583
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ + +++ TT TYNI++ A D + + L EM G
Sbjct: 584 GAYQL-----------FRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGG 632
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+P+ ++ ++ID +GN + + L M E G P + + I R+ +A
Sbjct: 633 CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAV 692
Query: 604 SLFEEMKHYQIQPNLVTYIT 623
+ M H I P +V I+
Sbjct: 693 DIIHFMVHNGIVPEVVNSIS 712
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 163/400 (40%), Gaps = 44/400 (11%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+ +S + + + + N++ FN + L + + ++ + G+ D+ +Y
Sbjct: 230 GEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTY 289
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C N V A++ H G L+ D FTY+T++ + Q A K+ +
Sbjct: 290 NTLICGLCKNSNVVEAEKYL----HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ G P+ T+ SLIN +++A+ LF L G +P N+L++ +
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405
Query: 448 QFDRAFRLFRS----------WTLS---KTQVALGEDYDGN---TDRISNMEHKD----- 486
+A ++ WT + +G D N D I+ D
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465
Query: 487 -------KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
KQ T + N +S P TYN ++ + + + LM
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSH-----GVTPDVITYNSVLNG-LSKAVKNEDLMETF 519
Query: 540 RTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
T+ G PN I++ IL ++ +G V AL ++ + G++PD V++ T I +
Sbjct: 520 ETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANN 579
Query: 597 KRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLH 635
LK A+ LF M + Y++ TY ++ A + LH
Sbjct: 580 GDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLH 619
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 162/409 (39%), Gaps = 34/409 (8%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G ++ ++E + N ++ +N++MN V + K +V+ M+ +G++ D+ ++
Sbjct: 90 GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I +K+ C A + + ++ ++G +L+ Y T+V F + + A ++
Sbjct: 150 TIRIKSFCRTKRPHSALRL---LNNMVSQGC-QLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
DML G+ P+ T++ L++ G V+++ L ++L+ G N NI +Q
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265
Query: 448 QFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
A + S ++ + G + N HK F N
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325
Query: 500 SHYSSFDKRF---------------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+ + K F P TY L+ C + R AL N
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P I + +LI G + ALQ++ M E+G S D+ Y I + + A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L + P++ T+ TL+ Y +++ + + MW G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDG---YCKQLKMETTIQILNKMWSHG 491
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G G V+ A+ + + M P V++Y + + V S KQA +F MK+ I P++
Sbjct: 87 GRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDV 146
Query: 619 VTYITLLRARSRYGSLHEVQQCL 641
T+ +++ R H + L
Sbjct: 147 YTFTIRIKSFCRTKRPHSALRLL 169
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 24/329 (7%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M K + + YN L+ C GN A+ + E + KG L V TY++++ +
Sbjct: 253 MTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDE---MIDKG-LTPTVVTYTSLISGYC 308
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ W A KV +M + G++PNT T++++I+ A ++ +A+ LF EM + P+
Sbjct: 309 NEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR--ISNMEHKDKQSITN 492
N++++ + AF L V G D T R IS + + ++
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLL------DEMVGKGFVPDTYTYRPLISGLCSVGR--VSE 420
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLSPNHI 549
FV + H + K Y+ L+ C + R K ++ R + G++ + +
Sbjct: 421 AKEFVDDLH------KDHHKLNNMCYSALVHGYCKE-GRFKDAVSACRVMVERGVAMDLV 473
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ ILID + +LK M G+ PD V YT I ++ LK+AF L++ M
Sbjct: 474 CYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIM 533
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PN+VTY L+ + G + + +
Sbjct: 534 VDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 162/374 (43%), Gaps = 62/374 (16%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
P+ Y R +I G+C G +++ +DL + LN +++L++ + +F +
Sbjct: 400 PDTYTYRPLIS--GLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAV 457
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M + GV D+ Y IL+ +T + ++G +K + G L+ D Y+ +
Sbjct: 458 SACRVMVERGVAMDLVCYAILIDGTAREHDT---RALFGLLKEMHNHG-LRPDAVIYTNM 513
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A + A + + M+ G PN +T+++LIN AGL+++A L +E L +
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN C D R GN ++ + H +
Sbjct: 574 TPNH---------ITYGCFLDHLTR------------------GGNMEKAVQLHHAMLKG 606
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPN 547
F TT +YNIL++ C L++ M + P+
Sbjct: 607 ---------------------FLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 548 HISW-TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+I++ TI+ + C S N++ A+++ M + G+ PD +AY+ + C + L++AF L
Sbjct: 646 YITYSTIIYEQCKRS-NLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELR 704
Query: 607 EEMKHYQIQPNLVT 620
+EM ++ N VT
Sbjct: 705 DEMIRRGMRSNHVT 718
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 171/420 (40%), Gaps = 60/420 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--------------- 298
P++YI ++ D+ K++ + + L+I V+N L+
Sbjct: 129 PDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI 188
Query: 299 -----------NVNAHDLKFTLE--VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
NV + KF ++K M + G+ A+ +Y+IL+ + C G E
Sbjct: 189 KNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRG------E 242
Query: 346 IYGEVKHLE--AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ + L+ K ++ V+ Y++++ + A ++M+ G+TP +T++S
Sbjct: 243 MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWT 460
LI+ N G +A ++ EM G PN+ ++ A A RLF +
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 461 LSKTQVALGEDYDGN--TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ ++V +G+ + IS H + + F P T TY
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGK-----------------GFVPDTYTY 405
Query: 519 NILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+ C+ K ++++ N++ ++ L+ G + A+ ++M E
Sbjct: 406 RPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVE 465
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++ D+V Y I R + F L +EM ++ ++P+ V Y ++ S+ G+L E
Sbjct: 466 RGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKE 525
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ N + K +L A +D PN+ +I+ G+C G K+ +
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALIN--GLCKAGLMDKAELLS 565
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ +VT N + ++ +++ ++++ M K G +A SYNIL++ C
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRL 624
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ H + D TYSTI+ Q A+K+ ML G+ P+
Sbjct: 625 GKIEEATKLL----HGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPD 680
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
T+ +S L++ C AG +E+A L +EM++ G N
Sbjct: 681 TLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/494 (17%), Positives = 193/494 (39%), Gaps = 74/494 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I + + F ++ ++ +A+ D K +Y ++I+ G C G+ ++ +
Sbjct: 228 ITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN--GYCKLGNASAAKYYF 285
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ + +T + + SL++ N + +VY M G+ + ++ ++ C A
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRA 345
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++GE+K + ++ +V TY+ +++ + A + ++M+ G P+
Sbjct: 346 NMMAEAIRLFGEMKE---RKIMPSEV-TYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPD 401
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T T+ LI+ + G V +A +++ + + N+ C + L+ + +F A R
Sbjct: 402 TYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACR 461
Query: 458 SWTLSKTQVAL--------GEDYDGNTDRISNM-----EHKDKQSITNTPNFVPNSHYSS 504
+ L G + +T + + H + N + + H +
Sbjct: 462 VMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI-DRHSKA 520
Query: 505 FDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
+ + +F P TY L+ C KA L E ++PNHI++
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580
Query: 552 TILIDACGGSGNVEGALQI----------------------------------LKIMRED 577
+D GN+E A+Q+ L M ++
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD + Y+T I + L++A L+ M ++P+ + Y L+ G E+
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAG---EL 697
Query: 638 QQCLAVYQDMWKAG 651
++ + +M + G
Sbjct: 698 EKAFELRDEMIRRG 711
>gi|125531299|gb|EAY77864.1| hypothetical protein OsI_32907 [Oryza sativa Indica Group]
Length = 1089
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 461 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 514
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 515 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 574
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 575 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 631
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 632 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 674
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 675 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 734
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 735 QLFEEIKSIKLMPTVSMMNALITA 758
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 404 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 463
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 464 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 523
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 524 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 583
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 584 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 643
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 644 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 703
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 704 DARAKGYQVG-----------------------------------------------TIA 716
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 717 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 776
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 777 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 828
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 458 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 517
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 518 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 557
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 627 RAREVYKMLQEYNIK----GTPEVYTI--ALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 681 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 740
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 741 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 796
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 797 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 853
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 417 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 472
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 473 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 526
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 527 -----------------------------------------IEPNVNTYSALIDGCAKAG 545
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 546 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 605
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 606 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDL---GF 662
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 663 ALKIYEDMNKIG 674
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 166/406 (40%), Gaps = 59/406 (14%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV------LAQ 344
+FNSL++ + D + ++ K M+K YNIL+ + C G LA+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439
Query: 345 EIYGEVKHLEAKGVLK---------------------------------LDVFTYSTIVK 371
+ Y E+ L A VL D TYS ++
Sbjct: 440 KAYNEM--LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A + A + ++M GV P+ T++ LI+ + AG+++QA + +EM++ GCEP
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY--DGNTDRISNM 482
L+ A ++A + A LF ++K T AL + Y GN ++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFE-LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY--YRVKALMNEMR 540
+ + + P+ Y + KP TY L+ C + + L+ M
Sbjct: 617 -YARMRGDADIPDV---DMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 672
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G PN I + LID + ++ A ++ M E G +P+V Y++ I + KRL
Sbjct: 673 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLD 732
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ +M PN+V Y ++ S+ E + + + ++
Sbjct: 733 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 141/369 (38%), Gaps = 62/369 (16%)
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
N L NV LE ++ G +YN L++ A AQ ++ E+ L
Sbjct: 219 NGLWNV-------ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKV--KEDMLSAGVTPNTITWSSLINACANAG 412
L +D FT + W+ AL + KED + PNTI ++ +I+ A
Sbjct: 272 ----LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEAS 322
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---------FRSWTLSK 463
E+AM M C PN Q ILL C+ Q R R+ + S+T+
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 464 TQVAL---GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V +D+ + ME + KP YNI
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKME------------------------KCECKPGYVVYNI 418
Query: 521 LMKACCTD--------YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
L+ + C+ + + NEM + G N ++ G G E A +++
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M +G PD Y+ I + R++ AF LF+EMK + P++ TY L+ S+ G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 633 SLHEVQQCL 641
+ + L
Sbjct: 539 IIKQAHNWL 547
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 162/383 (42%), Gaps = 42/383 (10%)
Query: 294 FNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L+ V A L V++ M +LG+ D + +A C G + E
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK-------WREAL 296
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L K + Y+ ++ +A +++ A+ M S PN T+ L+ C N
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------W 459
+ + + M+ GC P+ N L+ A ++ F A++L + +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416
Query: 460 TLSKTQVALGEDYDGN-TDRISNMEHKDKQS---ITNTPNFVPNSH----YSSFDKRF-- 509
+ + G + G T ++ + + S + N N V + + F+K +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 510 -------SFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C + RV+ L EM+ G+ P+ ++TILID
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLC-NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G ++ A L M DG P VV YTT I +++K++ A LFE M PN++
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595
Query: 620 TYITLLRARSRYGSLHEVQQCLA 642
TY L+ + G++ + Q A
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYA 618
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 56/401 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++Y +ID G ++ +++ + + +L++ + A + E+
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G ++ +Y L+ C +GN A +IY ++
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD------------------ 623
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
AD M K+K ++ PN +T+ +L++ A V+ A L E M GCEP
Sbjct: 624 --ADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD----- 486
N+ + L+ +A + D A +F + Y DR+ + D
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV-YTYSSLIDRLFKDKRLDLVLKV 737
Query: 487 -KQSITNT--PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
+ + N+ PN V T + L K TD LM M G
Sbjct: 738 LSKMLENSCAPNIVI---------------YTEMIDGLSKVAKTD--EAYKLMLMMEEKG 780
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN +++T +ID G +G V+ L++ + M G +P+ V YT I C + L +A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQQ 639
+L EEMK ++ +Y ++ R G L EV++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 168/391 (42%), Gaps = 43/391 (10%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
+CG G + K+ + ++ + ++ ++ NA ++ ++K M+ GV+
Sbjct: 464 LCGF-GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y IL+ AG A E+ + + V TY+T++ + AK +A
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEM----VRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
++ E M++ G PN IT+++LI+ +G +E+A ++ M P+
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD---------- 628
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
D F++ + V G DG + KD + + T FV
Sbjct: 629 ------VDMYFKIKNNVAEKPNVVTYGALVDG---LCKAHKVKDARDLLET-MFVDGC-- 676
Query: 503 SSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P T Y+ L+ C + + ++M G +PN +++ LID
Sbjct: 677 ---------EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFK 727
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
++ L++L M E+ +P++V YT I + + +A+ L M+ +PN+VT
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y ++ +G +V +CL ++++M G
Sbjct: 788 YTAMIDG---FGKAGKVDKCLELFREMGSKG 815
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 148/381 (38%), Gaps = 46/381 (12%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+V M G + D ++Y+ ++ C N + + K ++ GV+ DV+TY+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLC---NASRVENAFFLFKEMKGTGVVP-DVYTYTIL 530
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F+ A + A ++M+ G P +T+++LI+A A V A LFE M+ GC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 430 EPNSQCCNILLQACVE------ACQF-------------DRAFRLFRSWTLSKTQVALGE 470
PN L+ + ACQ D F++ + V G
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------S 510
DG + +D PN+ Y + F
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710
Query: 511 FKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+ P TY+ L+ D V ++++M +PN + +T +ID + A
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+++ +M E G P+VV YT I ++ ++ + LF EM PN VTY L+
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 629 SRYGSLHEVQQCL-AVYQDMW 648
G L E L + Q W
Sbjct: 831 CATGHLDEAYALLEEMKQTYW 851
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 147/356 (41%), Gaps = 24/356 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ + +L++ AH +K ++ + M G + Y+ L+ C A AQE++
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
H + +V+TYS+++ K + LKV ML PN + ++ +I+
Sbjct: 704 ----HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ ++A L M + GC+PN ++ +A + D+ LFR SK
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG-SKGCAP 818
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKAC 525
Y + H D+ Y+ + K+ + ++Y +++
Sbjct: 819 NFVTYTVLINHCCATGHLDEA-------------YALLEEMKQTYWPKHVSSYCKVIEGY 865
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK--IMREDGMSPDV 583
++ L+ E+ G +P + + +LID +G +E AL++ K I M+
Sbjct: 866 KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKK 925
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
YT+ I + ++ AF LF +M + P+L T++ LL R E Q
Sbjct: 926 NLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 26/256 (10%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--- 460
LI C GL A+ + G +P N L+Q + A + D A + R +
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
LS + LG + ++ + ++ S+ +FVPN T YN
Sbjct: 272 LSMDEFTLGF-FAQALCKVG--KWREALSLIEKEDFVPN---------------TILYNK 313
Query: 521 LMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
++ C + +A+ +N MR+ PN ++ IL+ C + +IL +M +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH--- 635
P + + + +S A+ L ++M+ + +P V Y L+ + G L
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 636 EVQQCLAVYQDMWKAG 651
+ Y +M AG
Sbjct: 434 TFELAEKAYNEMLSAG 449
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + FGK + L + +PN +I+ C G ++ A+ E+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ ++ + ++ + +L + + ++K G + Y +L+ AG
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLE 905
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+A E++ EV K ++ Y++++ F+ A A ++ DM+ GV P+ T+
Sbjct: 906 VALELHKEVISASMSMTAKKNL--YTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963
Query: 402 SSLINACANAGLVEQAMHLFEEMLQ 426
L+ E+A+ L + + Q
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 209/504 (41%), Gaps = 71/504 (14%)
Query: 197 IVQLCVNKPDVNLAIRYACIVP-RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPN 255
++Q + + LA R +P R + F R + + + AL+ D + S N
Sbjct: 151 LLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDG----MPSMN 206
Query: 256 MYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
+ +C T+ V G C + + A + E +R Q + N+ FN+ ++ A + +
Sbjct: 207 LVVCNTV--VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRI 264
Query: 312 YKNMQK---------------------------------------LGVMADMASYNILLK 332
+++MQ+ G + + SYN L
Sbjct: 265 FQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLS 324
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
G AQE+ E+ H +G+ + + +TY+ IV A +V+ + S
Sbjct: 325 GLVRNGRVGEAQELLREMAH---EGI-QPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG 380
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
++P+ +T++SL++A + G + A + +EM Q GC PNS N+LLQ+ A + A
Sbjct: 381 VMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEA 440
Query: 453 FRLF-----RSWTLSKTQVALGED-------YDGNTDRISNMEHKDKQSITNTPN-FVPN 499
RL + ++L + D D D + M + ++ N F+
Sbjct: 441 ERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSV 500
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
SS +R P TY+IL+ A C + + K + EM +SP+ + + I
Sbjct: 501 VSDSSISQR--CLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHG 558
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G A+++L+ M + G +P Y I+ + ++ L EMK I PN
Sbjct: 559 YCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPN 618
Query: 618 LVTYITLLRARSRYGSLHEVQQCL 641
++TY +L+++ + G +++ L
Sbjct: 619 VMTYNSLIKSFCQQGMVNKAMPLL 642
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 144/354 (40%), Gaps = 26/354 (7%)
Query: 293 VFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
V+N L+ + + L +YK++ G D+ + N+LL+A C AG LAQ ++ +
Sbjct: 112 VYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAM 171
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ F++ + + + A ALKV + M S N + ++++
Sbjct: 172 P--------ARNEFSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCNTVVAGFCK 219
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
GLVE+A L E M G PN N + A +A + A+R+F+ + E
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQD---------MQE 270
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTD- 528
D+ R + S FV + + F +YN + +
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330
Query: 529 -YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ L+ EM G+ PN ++ I++ G A ++ +R MSPDVV YT
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYT 390
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + + A + +EM PN TY LL++ R G E ++ L
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ D Y+ + C G T LA ++ ++ +E KG TY+ +++ F +
Sbjct: 545 ISPDSVIYDTFIHGYCKHGKTSLAIKV---LRDMEKKGC-NPSTRTYNLLIRGFEEKHKS 600
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ +K+ +M G++PN +T++SLI + G+V +AM L +EMLQ PN ++L
Sbjct: 601 EEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLL 660
Query: 440 LQACVEACQFDRAFRLF 456
++A + F A +F
Sbjct: 661 IKAYCKITDFPSAQMVF 677
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 162/393 (41%), Gaps = 20/393 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK-FTLEVYKNMQKLGVMA-DMASY 327
G +++ + ++ + + N Y +N +++ + K F +N + GVM+ D+ +Y
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
LL A C GN A I E+ KG + FTY+ +++ A A ++ E
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQ---KGCAP-NSFTYNVLLQSLWRAGRTTEAERLLE 445
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
M G + +T + +I+ ++ AM + + M + G + N L ++
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
R ++++ + + +D ++ M KD + + + +
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565
Query: 508 RFSFK-----------PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTIL 554
+ K P+T TYN+L++ + + LM+EM+ G+SPN +++ L
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I + G V A+ +L M ++ + P++ ++ IK + A +F+
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCG 685
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
Q V Y + + YG E + L + +M
Sbjct: 686 QKE-VLYCLMCTELTTYGKWIEAKNILEMALEM 717
>gi|115481316|ref|NP_001064251.1| Os10g0181200 [Oryza sativa Japonica Group]
gi|113638860|dbj|BAF26165.1| Os10g0181200, partial [Oryza sativa Japonica Group]
Length = 1021
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 393 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 446
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 447 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 506
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 507 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 563
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 564 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 606
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 607 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 666
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 667 QLFEEIKSIKLMPTVSMMNALITA 690
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 336 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 395
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 396 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 455
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 456 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 515
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 516 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 575
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 576 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 635
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 636 DARAKGYQVG-----------------------------------------------TIA 648
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 649 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 708
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 709 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 760
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 390 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 449
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 450 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 489
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 559 RAREVYKMLQEYNIK----GTPEVYTI--ALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 612
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 613 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 672
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 673 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 728
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 729 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 785
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 349 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 404
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 405 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 458
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 459 -----------------------------------------IEPNVNTYSALIDGCAKAG 477
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 478 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 537
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 538 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDL---GF 594
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 595 ALKIYEDMNKIG 606
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 31/379 (8%)
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V +++V+N+L+N D K ++ NM G+ + +Y+IL+ + C G +A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
G++ + K V+ YS+++ + A + ++M++ G+ PN + ++SL
Sbjct: 411 HFLGKMTEVGIKAT----VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS---WTL 461
I+ G + A L+ EM G PN+ L+ A + A +LF W +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 462 SKTQVAL-----GEDYDGNTDRISNM--EHKDKQSITNTPNFVP------NSHYSSFDKR 508
+V G +GNT R + E +K + +T + P ++ S +
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586
Query: 509 F-------SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
F K ++ L+ C + AL EM G++ + + +++LI
Sbjct: 587 FMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGIL 646
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ + +LK M + G+ PD V YTT I ++ LK AF L++ M PN+V
Sbjct: 647 RQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVV 706
Query: 620 TYITLLRARSRYGSLHEVQ 638
TY L+ + G + + +
Sbjct: 707 TYTALINGLCKIGLMDKAE 725
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 186/442 (42%), Gaps = 33/442 (7%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N V KK ++ SA + KK +P++++ +I+ G ++ +++ ++ +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ L L M ++G+ A + Y+ L+ C G A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ E + A G LK +V Y++++ + A ++ +M G++PNT T+++
Sbjct: 445 KSLFDE---MIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ +A + +A LF EM++ PN N+L++ + RAF L + K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE-MVEK 559
Query: 464 TQVALGEDYDG------NTDRISNMEH-----KDKQSITNTPNFVPNSHYSSFDKRF--- 509
V Y +T R+S + +Q N F H + R
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619
Query: 510 ----------SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
Y++L+ D + L+ +M GL P+++ +T +IDA
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+GN++ A + IM +G P+VV YT I + + +A L EM PN
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 618 LVTYITLLRARSRYGSLHEVQQ 639
TY L + G++ + Q
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQ 761
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 127/595 (21%), Positives = 239/595 (40%), Gaps = 105/595 (17%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + + KDG+L+E ES+ + G+ F + ++ ++ K G++D +
Sbjct: 358 YNALINSMCKDGKLDE----AESLFNNMGHKGLFPNDVTYSILIDSFCK---RGKLDVAL 410
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
L K+ E+G+ S L+ C+ L + R K L +
Sbjct: 411 HFLGKMTEVGIKATVYPYSS---LISGHCK-----------------LGKLR-AAKSLFD 449
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
E L KP+V +++ + + + K+ +L +A R Y S
Sbjct: 450 EMIANGL---KPNV--------------VIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 254 PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
PN Y +I G+C + A ++ ++ NV N +N L+ + +
Sbjct: 493 PNTYTFTALIS--GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE----IYGEVKHLE----------- 354
E+ M + G++ D +Y L+ C G A+E + GE + L
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610
Query: 355 -----------------AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+GV +D+ YS ++ + + + + + M G+ P+
Sbjct: 611 CKEGRLDDALDACREMLGRGV-AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++++I+A A AG ++ A L++ M+ GC PN L+ + D+A L R
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729
Query: 458 SWTLSKTQVALGEDYDGNTDRIS---NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ + Y D ++ N+E + F+ N
Sbjct: 730 E-MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLAN--------------- 773
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T TYNIL++ C ++ M G+SP+ IS++ +I G+++ A+++ +
Sbjct: 774 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 833
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
M G++PD VAY I C + L +AF L ++M ++PN TY +L+
Sbjct: 834 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 154/371 (41%), Gaps = 42/371 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ S + ++YV+ +++ D EV M+ G +A+YN+ ++ C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N + + + E+K+L + L+ DV TY T+V + ++ ++ +M+ G
Sbjct: 262 --KNQRVWEAV--EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ S+L++ G + A L ++ + G P+ N L+ + + + D A L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
F +NM HK T + + +S H+
Sbjct: 378 F-----------------------NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K T Y+ L+ C K+L +EM GL PN + +T LI G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A ++ M G+SP+ +T I + R+ +A LF EM + + PN VTY
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 623 TLLRARSRYGS 633
L+ + G+
Sbjct: 535 VLIEGHCKEGN 545
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 28/312 (8%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S ++ + ++MAL + ++++S+G+ P+ +++++ + +A + M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 425 LQAGCEPNSQCCNILL------QACVEACQFDR--AFRLFRSWTLSKTQVALG----EDY 472
+GC+ + N+ + Q EA + +++ R+ + + LG E++
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 473 DGNTDRISNM-EHKDKQSITNTPNFVPNSHY-----SSFD-----KRFSFKPTTTTYNIL 521
+ + ++ M E S N V S+FD K+F P+ YN L
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C D ++L N M GL PN ++++ILID+ G ++ AL L M E G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V Y++ I + +L+ A SLF+EM ++PN+V Y +L+ + G LH
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA-- 479
Query: 640 CLAVYQDMWKAG 651
+Y +M G
Sbjct: 480 -FRLYHEMTGKG 490
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 180/437 (41%), Gaps = 41/437 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYM--KSRAIYE 280
F REF ++ D ++R + ++ P+ +I +I V G G + K ++
Sbjct: 100 FAAVYREFSRRGDWQRSVRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFH 159
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDL--KFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
DL + + T Y SL+ A + + + M+ GV A+YN +L AC A
Sbjct: 160 DLPADSRTALSY--TSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARAT 217
Query: 339 NTVLAQE----IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ + + ++ E++H + ++ D+ TY+T++ A A + ML AGV
Sbjct: 218 DPPVPFDMLLGLFAEMRH-DVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGV 276
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+T ++ +++A A AG + + LF EM G P+ L++A A
Sbjct: 277 LPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVA 336
Query: 455 LFRSW-------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ R T + +V L D G R + ++ T P
Sbjct: 337 VLRQMQADGCAPTAATYRVLL--DLYGRQGRFDGVRELFREMRTAVP------------- 381
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P T TYN+L + V L ++M G+ P+ + ++ ACG G E
Sbjct: 382 -----PDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHE 436
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++L + ++GM P AYT ++ + ++A+ F M P + TY +L
Sbjct: 437 DAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLA 496
Query: 626 RARSRYGSLHEVQQCLA 642
++ G E + +
Sbjct: 497 NVFAKGGLFQEAESIFS 513
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 147/383 (38%), Gaps = 59/383 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--- 310
P+ R I+D GD + ++ ++ T + + LM + + T E
Sbjct: 278 PDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTR-VGATAEAVA 336
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + MQ G A+Y +LL G +E++ E++ + D TY+ +
Sbjct: 337 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMR-----TAVPPDTATYNVLF 391
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
VF D +++ +++ DML G+ P+ T ++ AC GL E A + + + + G
Sbjct: 392 SVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMV 451
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P ++ L++A A ++ A+ F T I ++
Sbjct: 452 PTAKAYTGLVEALGHAAMYEEAYVAFNMMT-----------------EIGSL-------- 486
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM-RTVGLSPN 547
PT TYN L + +++ + M + G+ N
Sbjct: 487 ----------------------PTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKN 524
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
S+ LI+A ++ A++ MR+ +PD + + + + ++ FE
Sbjct: 525 KDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFE 584
Query: 608 EMKHYQIQPNLVTYITLLRARSR 630
E++ P+++ Y +L +R
Sbjct: 585 EIQSNMAVPSIIAYCMMLSLYAR 607
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 513 PTTTTYNILMKACC--TD----YYRVKALMNEMR---TVGLSPNHISWTILIDACGGSGN 563
PT TYN ++ AC TD + + L EMR + + P+ ++ L+ A
Sbjct: 201 PTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSL 260
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A +L+ M E G+ PD +Y + R+ L + LF EM P+ Y+
Sbjct: 261 NDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLG 320
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ A +R G+ E +AV + M G
Sbjct: 321 LMEAHTRVGATAE---AVAVLRQMQADG 345
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 158/383 (41%), Gaps = 59/383 (15%)
Query: 257 YICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
Y C +++ G+C D S A + + L + + ++N+L+N +L+ +
Sbjct: 156 YTCSILLN--GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ + D +YN L+ C A AQ++ E ++ GV V T++T++
Sbjct: 214 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME---MQDNGV-NPTVETFNTLIDA 269
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + V +M G+ PN +++ S++NA G + +A+ + ++M PN
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 329
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+Q N ++ A VE D+AF L
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKM--------------------------------- 356
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
K P+ TYN+L+K C + + ++N + L P+ +S
Sbjct: 357 --------------KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI AC GN++ AL + + M + G+ V Y I + RL + L+++M
Sbjct: 403 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+ P+ + ++ A S+YG+
Sbjct: 463 QNNVVPSNAIHNIMVEAYSKYGN 485
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 62 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLL--SGLCRAGRMGETSALLDEMASQKMVPD 119
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 177
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 178 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 236 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 295
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 296 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 338
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 339 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L+E++
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY-- 456
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 457 -LYQKMMQ 463
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 128
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 129 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 188
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 189 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 248
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 249 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 282
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 283 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 342
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 388
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 21/306 (6%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + G + F+Y+ ++ A A++V ++M V PN IT++++I+
Sbjct: 2 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 61
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G +E L ++M+ G +PN+ N+LL A + L S+ V G
Sbjct: 62 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDG 120
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY--NILMKACCT 527
Y D +S + D +++ S F K T Y +IL+ C
Sbjct: 121 FTYSILFDGLS--RNGDSKAM-----------LSLFGKYLKNGVTIGDYTCSILLNGLCK 167
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
D + ++ + GL P + + LI+ +G +EGA M+ + PD +
Sbjct: 168 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 227
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
Y I +++R+ A L EM+ + P + T+ TL+ A R G L ++C V
Sbjct: 228 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL---EKCFIVLS 284
Query: 646 DMWKAG 651
+M + G
Sbjct: 285 EMQENG 290
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 145/332 (43%), Gaps = 35/332 (10%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN+++ AG A E++ E + + VL + TY+T++ + ++
Sbjct: 17 SYNVVIAGMWRAGRGGDAVEVFDE---MTERAVLP-NHITYNTMIDGHIKGGDLEAGFRL 72
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
++ M+ G+ PN IT++ L++ AG + + L +EM P+ +IL
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNT-------DRISNMEHKDKQSITNTPNFVP 498
LF + K V +G DY + D ++ + QS+ N
Sbjct: 133 NGDSKAMLSLFGKYL--KNGVTIG-DYTCSILLNGLCKDGKVSIAEEVLQSLVNA----- 184
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILID 556
PT YN L+ C A +M++ + P+HI++ LI+
Sbjct: 185 -----------GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ + A +L M+++G++P V + T I R+ +L++ F + EM+ ++P
Sbjct: 234 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
N+V+Y +++ A + G + E +A+ DM+
Sbjct: 294 NVVSYGSIVNAFCKNGKIPE---AVAILDDMF 322
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 219
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 278
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 279 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 338
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 339 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 395
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 396 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 452
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 453 EMEYLYQKMMQNNVVPSNAIHNIMVEA 479
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 147/655 (22%), Positives = 257/655 (39%), Gaps = 115/655 (17%)
Query: 50 PTVHSSQTALLSTVRRDLS-SRNDYYADMASKLAKDGRLEEFAMIVE-----------SV 97
P+ S T +LS + LS S N +++ DG + F ++ +
Sbjct: 8 PSSRPSGTQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKL 67
Query: 98 VVSEGNVSKFASMLSL--EMVASGIVKSIRE-----------GRIDCVVGVLKKLNELGV 144
+ S + +++LSL +M + GI +I R+ VL K+ +LG
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 145 APLELFDGSGFK-LLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVN 203
P D + F L++ C VE +G E L K + E FR
Sbjct: 128 QP----DTATFTTLIRGIC--------VEGKIG-----EALHLFDKMIGEGFR------- 163
Query: 204 KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
PDV + + + K + +A+R + + PN++ TII
Sbjct: 164 -PDV--------------VTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 264 DVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLG 319
D +C D + A ++ ++ ++ ++ +I+ +NSL++ N + K + M
Sbjct: 209 D--SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+M D+ S+N ++ A C G A ++ V + +GV + +V TY+ ++
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDV---VDKMIQRGV-EPNVVTYTALMDGHCLLSEM 322
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH-------------------L 420
A+KV + M+ G PN I++++LIN +++A+H +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F+ M+ GC PN N L+ + + D+A LF + L D + I
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE----LIPDTVTYSTLIH 438
Query: 481 NMEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ H ++ +I V S P TY IL+ C + Y +A L+
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQI----------PNLVTYRILLDYLCKNRYLAEAMALL 488
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ L P+ I ID +G +E A + + G+ PDV Y+ I R
Sbjct: 489 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 548
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L +A LF EM N Y T+ R R +E + + + Q+M G
Sbjct: 549 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN---NETSRAIQLLQEMVARG 600
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 24/301 (7%)
Query: 188 VKELDEEFRIVQLCVNK---PDV---NLAIRYACIVPRAD--ILFCNFVREFGKKRDLVS 239
+ E+DE ++ V K P+V N I C + R D I + + ++
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--EDLRSQNVTLNIYVFNSL 297
A++ +D PN+ T+I+ G C +A+Y ++ Q + + +++L
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLIN--GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436
Query: 298 MNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ H L+ + ++ M + ++ +Y ILL C N LA E +K +E
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC--KNRYLA-EAMALLKAIEG 493
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D+ + + A + A + ++ S G+ P+ T+S +IN GL++
Sbjct: 494 SN-LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 552
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A LF EM + GC N N + + + + RA +L + VA G D +
Sbjct: 553 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM------VARGFSADAS 606
Query: 476 T 476
T
Sbjct: 607 T 607
>gi|215694797|dbj|BAG89988.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 930
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 324 MASYNILLKACCLAGNTVLAQEIYG--EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
M+++N+LL C +Q+ G +V L + LK D Y+T++ A
Sbjct: 302 MSTFNMLLSVC------ANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDA 355
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
+V +M+SAG+ PN T+S+LI+ CA AG V +A + M +P+ N L+
Sbjct: 356 MFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALIS 415
Query: 442 ACVEACQFDRAFRLFRSWTL----SKTQVALGEDY------------DGNTDRISNMEHK 485
AC E+ RAF + T SK + D+ G DR +
Sbjct: 416 ACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREV--- 472
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVG 543
Y + ++ K T Y I +++C D + +M +G
Sbjct: 473 ----------------YKML-QEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG 515
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ + + L+D G + + A +I+K R G +AY++ + C +K K+A
Sbjct: 516 VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL 575
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
LFEE+K ++ P + L+ A
Sbjct: 576 QLFEEIKSIKLMPTVSMMNALITA 599
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 179/472 (37%), Gaps = 58/472 (12%)
Query: 165 LLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILF 224
LL G ++ V L+E +E+ L + C + V A+R+ ++ +
Sbjct: 245 LLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMST 304
Query: 225 CNFVREF-GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
N + +D AL+ K+ P+ + T+I C CG ++ ++
Sbjct: 305 FNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMV 364
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
S + N+ +++L++ A + Y M V D +N L+ AC +G
Sbjct: 365 SAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVA 424
Query: 342 LAQEIYGEV--KHLEAKGVLKL--DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
A ++ E+ + E+KG + D T ++K A A +V + + +
Sbjct: 425 RAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGT 484
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
++ + +C+ G + A+ ++E+M + G +P+ + L+ A + D AF + +
Sbjct: 485 PEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMK 544
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
QV T
Sbjct: 545 DARAKGYQVG-----------------------------------------------TIA 557
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y+ LM ACC D+ + L E++++ L P LI A V + ++L M+
Sbjct: 558 YSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMK 617
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK--HYQIQPNLVTYITLL 625
G+ P+++ Y+ C R+ + LFE++K + P +V +T L
Sbjct: 618 RLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGL 669
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P ++ +L+ C S + +GALQ++ +++E G+ PD YTT I C + ++ F
Sbjct: 299 NPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFE 358
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+F EM I+PN+ TY L+ ++ G +V + Y M
Sbjct: 359 VFHEMVSAGIEPNVNTYSALIDGCAKAG---QVAKAFGAYGIM 398
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
+ R++ L+ Y+ +P +Y + C + GD + IYED+ V +
Sbjct: 468 RAREVYKMLQEYNIK----GTPEVYT--IALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 521
Query: 293 VFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
++L++V H + E+ K+ + G +Y+ L+ ACC A + A +++ E+
Sbjct: 522 FLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEI 581
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K ++ L V + ++ D + +V +M GV PN IT+S L AC
Sbjct: 582 KSIK----LMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACER 637
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQV 466
+ + LFE++ + N L C++ FD L ++ L K Q+
Sbjct: 638 NAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGLCLQ--MFDNDLSLGNIVVTFNLGKPQI 694
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ +E KG+L ++ +++ F +A Q A+ P T++ L++ CA
Sbjct: 258 LESMEQKGLLDMNKIHHAS----FLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCA 313
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
N+ + A+ + + +AG +P+ + L+ C + + D F +F V+ G
Sbjct: 314 NSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM------VSAG 367
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+P TY+ L+ C
Sbjct: 368 -----------------------------------------IEPNVNTYSALIDGCAKAG 386
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG--------M 579
KA M + + P+ + + LI ACG SG V A +L M + +
Sbjct: 387 QVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPI 446
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD V +K C+++ + +A +++ ++ Y I+ Y LR+ S G L
Sbjct: 447 LPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFA-- 504
Query: 640 CLAVYQDMWKAG 651
L +Y+DM K G
Sbjct: 505 -LKIYEDMNKIG 515
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 190/416 (45%), Gaps = 25/416 (6%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L CN +E AL + A +K +P Y+CR++I C G + + ++ D+
Sbjct: 336 LKCNLQKE---------ALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDM 386
Query: 283 RSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S V ++ +++NV+ D+K E++++++ D+ +YN+++ G
Sbjct: 387 QSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMH 446
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A IY K +E + L D +TY +++++ A ++ + ++ V + +
Sbjct: 447 EEAFRIY---KLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVM 503
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ ++N CA +E+ +F+EM+ GC PN+ N+++ ++ DRA R +
Sbjct: 504 CNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRA----RDAS 559
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
Q+ + + +T S + +D +++ T + N+ + S + +
Sbjct: 560 KLAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGG-----SLEAYNCVLDA 614
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
KA D +++ ++ M GL + S+ ILI+ G + + M+E+G
Sbjct: 615 YGKAGHLD--KLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFI 672
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
PD Y T I+ + +A F+ M+ I P+ VTY+ L+ A + G+L E
Sbjct: 673 PDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLE 728
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 20/302 (6%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ G + +V++Y+ + K+ + W + ++ ML G P+ T+++LI + + A
Sbjct: 1 MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKAD 60
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV-ALGED 471
+ A F+ ML+ G +P ++++ + + + A F S QV A
Sbjct: 61 YADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSA 120
Query: 472 YDGNTDRISNMEHKDK--QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
R E +K + + N P+ R ++ TY K
Sbjct: 121 MIAIYTRCGFFEKAEKIMEDMWN-HKIAPD--------RDNWLKQMNTYGQQGKI----- 166
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ +M+ M +G+ + + +I A G +G E AL++ + M+E G+ PD V Y+
Sbjct: 167 EEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCM 226
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
I C R+ +L+ A F+ MK I P + TL+ S YG V + V DM
Sbjct: 227 IGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLI---SLYGKARNVVGIVRVLADMKN 283
Query: 650 AG 651
G
Sbjct: 284 FG 285
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 166/394 (42%), Gaps = 55/394 (13%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
++I G G Y K+ ++E ++ + + ++ ++ A L+ L+ ++ M++L
Sbjct: 190 SMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRL 249
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+M +++N L+ A N V + ++K+ D T +V+ + A
Sbjct: 250 GIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTP----DSQTLDAVVRAYERAGQ 305
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
+ ++V + AG +T ++ +L++ L ++A+ +F M +AG P C
Sbjct: 306 TKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRS 365
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ AC +A F+ A +FR D QS P
Sbjct: 366 LICACKDAGMFEDATNVFR----------------------------DMQSAGVVP---- 393
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDAC 558
S + + T N+ D + + L +R+ + I++ ++I+
Sbjct: 394 -----------SLETSCTMINV--HGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVY 440
Query: 559 GGSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G E A +I K+M E DG+ PD Y + +++C + QA ++ +++ ++ +
Sbjct: 441 MRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELD 500
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
V +L +R+ L EV + ++Q+M G
Sbjct: 501 EVMCNCVLNTCARFLPLEEVHK---IFQEMIDVG 531
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 193/461 (41%), Gaps = 61/461 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + +GK ALR ++ K+ P+ +I CG G + ++ ++
Sbjct: 188 YNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMK 247
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ FN+L+++ A ++ + V +M+ G D + + +++A AG T
Sbjct: 248 RLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQT- 306
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
+++ + L G ++ D +Y T++ V+ + AL V M AG+ P
Sbjct: 307 --KKVVQVLSLLREAGWVE-DTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMC 363
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPN--SQCCNILLQACV-EACQFDRAFRLFRS 458
SLI AC +AG+ E A ++F +M AG P+ + C I + + Q + FR RS
Sbjct: 364 RSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRS 423
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
++SK + + + N M H++ I Y ++ P + TY
Sbjct: 424 -SVSKLDI-IAYNVIINVYMRYGM-HEEAFRI-----------YKLMEEEDGLLPDSYTY 469
Query: 519 NILMKAC--CT-------DYYR----------------------------VKALMNEMRT 541
+ +++ C C Y+R V + EM
Sbjct: 470 HSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMID 529
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
VG PN I++ ++ID G SG ++ A K+ ++ G++ D + ++T I + + +
Sbjct: 530 VGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVA-DKITFSTLINSYGKKQDFRN 588
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ EM++ +L Y +L A + G L +++ +A
Sbjct: 589 MEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIA 629
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 22/336 (6%)
Query: 315 MQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ G ++ SYNI+ K + E+ G+ + G + D +T++T++
Sbjct: 1 MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQ---MLGDGCVP-DDYTFNTLIMSA 56
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+ A + A + + ML GV P +T+S ++ G VE A F MLQ+G + +
Sbjct: 57 SKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVA 116
Query: 434 QCCNILLQACVEACQF-DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
++ A C F ++A ++ + ++A D + + M +Q
Sbjct: 117 AYSAMI--AIYTRCGFFEKAEKIMED--MWNHKIAPDRD-----NWLKQMNTYGQQGKIE 167
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+ ++ +R YN ++ A Y + L +M+ GL P+ ++
Sbjct: 168 EAEHIMDTM-----ERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVT 222
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ +I ACG +G + AL + M+ G+ P + T I + +++ + + +MK
Sbjct: 223 YSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMK 282
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++ P+ T ++RA R G +V Q L++ ++
Sbjct: 283 NFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLRE 318
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 151/364 (41%), Gaps = 24/364 (6%)
Query: 292 YVFNSL-MNVNAHDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
Y FN+L M+ + D + ++ M + GV +Y++++ G A+ +
Sbjct: 47 YTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAF-- 104
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
H+ G+ V YS ++ ++ +++ A K+ EDM + + P+ W +N
Sbjct: 105 -SHMLQSGIQV--VAAYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYG 161
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
G +E+A H+ + M + G N ++ A +A +++A RLF + L
Sbjct: 162 QQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEK----MKEAGLE 217
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCT 527
D + I + Y KR P ++ +N L+
Sbjct: 218 PDEVTYSCMIG--------ACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKAR 269
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+ + ++ +M+ G +P+ + ++ A +G + +Q+L ++RE G D +Y
Sbjct: 270 NVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYG 329
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T + V ++ K+A S+F M+ + P +L+ A G + V++DM
Sbjct: 330 TLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATN---VFRDM 386
Query: 648 WKAG 651
AG
Sbjct: 387 QSAG 390
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 148/382 (38%), Gaps = 76/382 (19%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADM 324
CG + K+ I ED+ + + + N L +N + + +E + M++LG+ +
Sbjct: 128 CGFFEKAEKIMEDMWNHKIAPD--RDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGV 185
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
YN +++ + A ++ AL+
Sbjct: 186 VGYN---------------------------------------SMITAYGKAGLYEKALR 206
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ E M AG+ P+ +T+S +I AC AG + A+ F+ M + G P S N L+
Sbjct: 207 LFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYG 266
Query: 445 EACQFDRAFRL------FRSWTLSKTQVALGEDYD--GNTDRISNMEHKDKQSITNTPNF 496
+A R+ F S+T A+ Y+ G T ++ + S+ +
Sbjct: 267 KARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQV-----LSLLREAGW 321
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTIL 554
V + T +Y L+ C ++ + MR G++P L
Sbjct: 322 VED---------------TESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSL 366
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I AC +G E A + + M+ G+ P + T I V +KQA LF ++
Sbjct: 367 ICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVS 426
Query: 615 QPNLVTYITLLRARSRYGSLHE 636
+ +++ Y ++ RYG +HE
Sbjct: 427 KLDIIAYNVIINVYMRYG-MHE 447
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 171/378 (45%), Gaps = 28/378 (7%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + +I+ FN +++ + K F ++ + M + G D+ SY IL+
Sbjct: 100 ALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAG 393
AG A EI+ + + + D + +V A+ +A + V E++ SA
Sbjct: 160 FRAGKVTDAVEIWNAM----IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V + + +++LI+ AG +E+A L M + GCEP+ N+LL + RA
Sbjct: 216 VKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S Q+ Y+ R + H P+ YS K +
Sbjct: 276 GVMTEMVRSGIQLD-AYSYNQLLKRHCRVSH-------------PDRCYSFMLKEMEPRG 321
Query: 514 --TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+Y+ L++ C ++ + L EMR G+ N +++T LI A GN A +
Sbjct: 322 FCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKK 381
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+L M E G+SPD + YTT + +S + +A+ +F +M ++I P+ ++Y +L+
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLC 441
Query: 630 RYGSLHEVQQCLAVYQDM 647
R G V + + +++DM
Sbjct: 442 RSG---RVTEAIKLFEDM 456
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 143/357 (40%), Gaps = 42/357 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V+ M+ + YN + LA+ IY ++ + L FTYS
Sbjct: 29 VQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMG----FSLIPFTYSR 84
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ K +++ + DM + G P+ ++ ++ V A+ F M+Q G
Sbjct: 85 FISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRIS 480
EP+ IL+ A + A ++ + S + +G + D
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 481 NMEHKD-KQSITNTPNFVPNSHYSSFDK---------------RFSFKPTTTTYNILMKA 524
M ++ K + V N+ S F K + +P TYN+L+
Sbjct: 205 EMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLL-- 262
Query: 525 CCTDYY-------RVKALMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMRE 576
+YY R + +M EM G+ + S+ L+ C S +LK M
Sbjct: 263 ---NYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEP 319
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
G DVV+Y+T I+ R+ K+A+ LFEEM+ I N+VT+ +L++A R G+
Sbjct: 320 RGFC-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGN 375
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + K ++++ M++ G++ ++ ++ L+KA GN+ +A+++ ++ L L
Sbjct: 338 ASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELG----LSP 393
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+TI+ + A + DM+ +TP+ I+++SLI+ +G V +A+ LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M C P+ ++ + + A++++
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVW 488
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
K+ ++E++R + + N+ F SL+ + ++ ++ M +LG+ D Y +L
Sbjct: 343 KAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +GN A I+ ++ E + D +Y++++ + A+K+ EDM
Sbjct: 403 DHLCKSGNVDKAYGIFNDMIEHE----ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +T+ +I + A ++++M+ G + + L++A
Sbjct: 459 KECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 21/342 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y+ M G++ D+ Y++L + C G +++ E+ L GV K +V+ Y+ ++
Sbjct: 221 YQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL---GV-KPNVYIYTIYIR 276
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ E M GV PN T+S++I+ G + QA L++E+L A P
Sbjct: 277 DLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLP 336
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L+ F +A L + +L V G D N + + H +S
Sbjct: 337 NVVVFGTLVDG------FCKARELVAARSLFVHMVKFG--VDPNLYVYNCLIHGQCKS-- 386
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHI 549
N + S + + P TY IL+ CT+ +A L M+ + P+ +
Sbjct: 387 --GNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSV 444
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ LI N+E AL + M G+ P+++ ++T I + + +K A L+ EM
Sbjct: 445 TYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEM 504
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I P++VTY TL+ A + ++ E L +Y DM +AG
Sbjct: 505 TIKGIVPDVVTYTTLIDAHFKEANMKEA---LRLYSDMLEAG 543
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 161/387 (41%), Gaps = 55/387 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+++I + C G K + +++ S V N+Y++ + + ++ ++
Sbjct: 231 PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKM 290
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ GV+ ++ +Y+ ++ C GN A +Y E+ E L +V + T+V
Sbjct: 291 FELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE----LLPNVVVFGTLVD 346
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F A+ A + M+ GV PN ++ LI+ +G + +AM L EM P
Sbjct: 347 GFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSP 406
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ IL+ + A RLF Q +
Sbjct: 407 DVFTYTILINGLCTEERLAEANRLF-------------------------------QRMK 435
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHI 549
N F P++ TYN L+ C +Y KAL +EM + G+ PN I
Sbjct: 436 NERIF----------------PSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNII 479
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ LID N++ A+ + M G+ PDVV YTT I + +K+A L+ +M
Sbjct: 480 TFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDM 539
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
I PN T+ L+ + G L +
Sbjct: 540 LEAGIHPNDHTFACLVDGFWKEGRLSD 566
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 30/406 (7%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRS 284
++R+ ++ + A + ++ K H PN+Y +ID G C G+ ++ +Y+++
Sbjct: 274 YIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMID--GYCKTGNLRQAYGLYKEILV 331
Query: 285 QNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ N+ VF +L++ A +L ++ +M K GV ++ YN L+ C +GN +
Sbjct: 332 AELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLE 391
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A + E++ L L DVFTY+ ++ + A ++ + M + + P+++T++
Sbjct: 392 AMGLLSEMESLN----LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYN 447
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
SLI+ +E+A+ L EM +G EPN + L+ + A L+ T+
Sbjct: 448 SLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIK 507
Query: 463 KT---QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
V D + + E S PN H + +K +
Sbjct: 508 GIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDA 567
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSP------NHISWTILIDACGGSGNVEGALQILKI 573
I D+Y L N G S ++ +T LI+ +G + A +
Sbjct: 568 I-------DFY----LENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSD 616
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
M+ G++PD+ +Y + +K +R KR+ L +M I PNL+
Sbjct: 617 MKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLM 662
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F V F K R+LV+A + K PN+Y+ +I G C G+ +++ +
Sbjct: 339 VVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH--GQCKSGNMLEAMGLL 396
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
++ S N++ +++ + L+N L +++ M+ + +YN L+ C
Sbjct: 397 SEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKE 456
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
N A ++ E + + GV + ++ T+ST++ + + + A+ + +M G+ P+
Sbjct: 457 YNIEKALDLCSE---MTSSGV-EPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPD 512
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+T+++LI+A +++A+ L+ +ML+AG PN
Sbjct: 513 VVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDH 549
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
D+ W L M+S G+ P+ +S L C G + L +EM G +PN
Sbjct: 215 DSVWVDYQL-----MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVY 269
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSK------TQVALGEDY--DGNTDRISNMEHKD 486
I ++ + + A ++F + T A+ + Y GN + + +K+
Sbjct: 270 IYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL-YKE 328
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
PN V + L+ C + ++L M G+
Sbjct: 329 ILVAELLPNVV-------------------VFGTLVDGFCKARELVAARSLFVHMVKFGV 369
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN + LI SGN+ A+ +L M +SPDV YT I +RL +A
Sbjct: 370 DPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANR 429
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF+ MK+ +I P+ VTY +L+ + + +++ L + +M +G
Sbjct: 430 LFQRMKNERIFPSSVTYNSLIHG---FCKEYNIEKALDLCSEMTSSG 473
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 15/227 (6%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYM 273
I P + + + + + F K+ ++ AL PN+ T+ID G C +
Sbjct: 439 IFP-SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLID--GYCKVRNIK 495
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAH----DLKFTLEVYKNMQKLGVMADMASYNI 329
+ +Y ++ + + ++ + +L ++AH ++K L +Y +M + G+ + ++
Sbjct: 496 AAMGLYFEMTIKGIVPDVVTYTTL--IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 553
Query: 330 LLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTY---STIVKVFADAKWWQMALKV 385
L+ G A + Y E K +++ + Y + +++ + A +
Sbjct: 554 LVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRF 613
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
DM S GVTP+ ++ S++ A + M L +M++ G PN
Sbjct: 614 FSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 36/325 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK--GVLKLDVFTYST 368
V+ + + G+ D+ SYNILL C + A E+ H+ A G DV +YST
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELL----HIMADDGGDCPPDVVSYST 93
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ F + ML ++PN +T++S+I A A V++AM + M+++G
Sbjct: 94 VINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 429 CEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQVALGEDYDGNTDRI-SNMEH 484
P+ N ++ + Q A + RS + V Y+ D + N
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT----YNSLMDYLCKNGRC 202
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTV 542
+ + I + S KR KP TTY L++ T V+ L++ M
Sbjct: 203 TEARKI-----------FDSMTKR-GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PNH ++IL+ A VE A+ + MR+ G++P+ V Y T I V +S R++ A
Sbjct: 251 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 310
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
FE+M ++P+ + Y +L+ +
Sbjct: 311 MLYFEQMIDEGLRPDSIVYNSLIHS 335
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 40/371 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
Q ++ N+ +NS++ A + +EV M K GVM D +YN ++ C +G
Sbjct: 110 QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ--- 166
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
+E +K + + GV + DV TY++++ A K+ + M G+ P+ T+
Sbjct: 167 PKEAIVFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSW 459
+L+ A G + + L + M++ G PN +IL+ A + + + A +F R
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 460 TLSKTQVALGEDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
L+ V G D + R+ + +Q I +P +
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE-----------------GLRPDSIV 328
Query: 518 YNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN L+ + C + + + L EM G+ + I + +ID+ G V + ++ +M
Sbjct: 329 YNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMV 388
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G+ PD++ R +A LF + PN TY + G L
Sbjct: 389 RIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 438
Query: 636 EVQQCLAVYQD 646
E+ Q +D
Sbjct: 439 ELDQLFLSMED 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 164/378 (43%), Gaps = 32/378 (8%)
Query: 265 VCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
V G C AI + +RS V ++ +NSLM+ + + T +++ +M K G+
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D+ +Y LL+ G V E++G + + G+ + + +S +V +A + +
Sbjct: 218 KPDITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPNHYVFSILVCAYAKQEKVE 273
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
A+ V M G+ PN +T+ ++I+ +G VE AM FE+M+ G P+S N L+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ ++++A LF + + L + + I + K+ + I + F
Sbjct: 334 HSLCIFDKWEKAEELF--LEMLDRGICLSTIF---FNSIIDSHCKEGRVIESGKLF---- 384
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
R KP T +A K L + GL PN+ ++ ++ + G
Sbjct: 385 ---DLMVRIGVKPDIITLGRNDEA--------KDLFVAFSSNGLVPNYWTYRLMAENIIG 433
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPN 617
G +E Q+ M ++G + D ++ ++ + +A S+ +E KH+ ++ +
Sbjct: 434 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEAS 492
Query: 618 LVTYITLLRARSRYGSLH 635
+ L + +Y H
Sbjct: 493 TASLFIDLLSGGKYQEYH 510
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
E A H+F+E+L+ G P+ NILL + + A L + + D
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELL--------HIMADDGGDC 84
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
D +S S F D+R S P TYN ++ A C KA
Sbjct: 85 PPDVVS-------YSTVINGFFKEGDLDKMLDQRIS--PNVVTYNSIIAALCKAQTVDKA 135
Query: 535 L--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ + M G+ P+ +++ ++ SG + A+ LK MR DG+ PDVV Y + +
Sbjct: 136 MEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 195
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ R +A +F+ M ++P++ TY TLL+ + G+L E+ L
Sbjct: 196 LCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLL 244
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 218 PRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYICRT 261
P+ I+F +R G + D+V+ A + +D+ K P++ T
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG 319
++ G ++ + + + + N YVF+ L+ A K + V+ M++ G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+ + +Y ++ C +G A +Y E E L+ D Y++++ W
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAM-LYFEQMIDEG---LRPDSIVYNSLIHSLCIFDKW 342
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ A ++ +ML G+ +TI ++S+I++ G V ++ LF+ M++ G +P+
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+++M +SPN +++ +I A + V+ A+++L M + G+ PD + Y + +
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
S + K+A ++M+ ++P++VTY +L+ + G E ++ ++ M K G
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK---IFDSMTKRG 216
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 103/255 (40%), Gaps = 29/255 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ ++ + K LV D ++ PN Y+ ++ ++ ++ +R
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
Q + N + ++++V + ++ + ++ M G+ D YN L+ + C+
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTI------VKVFADAKWWQMALK--VKEDML--- 390
A+E++ E+ +G+ +F S I +V K + + ++ VK D++
Sbjct: 344 KAEELFLEMLD---RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400
Query: 391 -------------SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
S G+ PN T+ + GL+E+ LF M GC +S N
Sbjct: 401 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 460
Query: 438 ILLQACVEACQFDRA 452
+++ ++ + RA
Sbjct: 461 FIVRELLQRGEITRA 475
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 38/289 (13%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M G PN ++ ++L+ A G A +F M +G EP++ I+L+ VE +
Sbjct: 142 MNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNK 201
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPNSHY 502
F A +F + L+K L D + N E K VP S
Sbjct: 202 FKEAEEVFET-LLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTV 260
Query: 503 S-----SFD-------------KRFSFKPTTTTYNILMKACCTDYYRVK------ALMNE 538
+ SF+ +R +P +Y +L+KA Y R + A+ E
Sbjct: 261 TYNSLMSFETNYKEVSKIYDQMQRSGLRPDVVSYALLIKA----YGRARREEEALAVFEE 316
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G+ P+H ++ IL+DA SG VE A + K MR D +PD+ +YTT + V +
Sbjct: 317 MLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASD 376
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++ A + F+ ++ ++PN+VTY L++ ++ +L ++ + +Y++M
Sbjct: 377 MEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNL---EKMMEIYEEM 422
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 178/440 (40%), Gaps = 61/440 (13%)
Query: 217 VPRADILFCNFVR-EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR D++ VR + KK DLVS + + S+ H N +I G GD+ +
Sbjct: 78 LPR-DLVLGTLVRFKQLKKWDLVSEILEWLQSQ-HWWDFNEMDFLMLITAYGKLGDFNGA 135
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKA 333
+ + N+ +LM ++ +++ MQ G +Y I+LK
Sbjct: 136 EMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKT 195
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
A+E++ + + E L+ D + ++ + A ++ A KV M G
Sbjct: 196 FVEGNKFKEAEEVFETLLNKE-NSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERG 254
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V +T+T++SL++ N V + ++++M ++G P+ +L++A A + + A
Sbjct: 255 VPQSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLRPDVVSYALLIKAYGRARREEEAL 311
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+F E D +P
Sbjct: 312 AVFE------------EMLDAGV-----------------------------------RP 324
Query: 514 TTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ YNIL+ A + + + MR +P+ S+T ++ A + ++EGA
Sbjct: 325 SHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFF 384
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
K +R+DG+ P+VV Y IK + L++ ++EEM+ I+ N T++ A Y
Sbjct: 385 KRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDA---Y 441
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + + Y++M G
Sbjct: 442 GKNKDFGSAVIWYKEMEHHG 461
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 163/389 (41%), Gaps = 26/389 (6%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + +GK D A + + PN+ +++ G G Y + AI+ ++
Sbjct: 119 FLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 178
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYK---NMQKLGVMADMASYNILLKACCLAG 338
+ + + ++ V + K EV++ N + + D +++++ AG
Sbjct: 179 TSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAG 238
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
N A++++ L A+ + TY++++ + ++ K+ + M +G+ P+
Sbjct: 239 NYEKARKVFA----LMAERGVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLRPDV 291
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
++++ LI A A E+A+ +FEEML AG P+ + NILL A + ++A +F+S
Sbjct: 292 VSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKS 351
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ D T +S + N + ++ ++ KP TY
Sbjct: 352 MRRDRCT----PDLCSYTTMLS--------AYVNASDMEGAENFFKRLRQDGLKPNVVTY 399
Query: 519 NILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
L+K A + ++ + EM+ + N T ++DA G + + A+ K M
Sbjct: 400 GALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEH 459
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
G+ PD A + + K+A L
Sbjct: 460 HGVPPDQKAQNILLSLAKTQDEQKEASQL 488
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 218/512 (42%), Gaps = 87/512 (16%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNE---------CQRLLDSG------EVEMF-VGL- 177
+L ++ E GV P E GS KL N Q + D G E EMF +G
Sbjct: 443 LLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQA 502
Query: 178 ------MEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREF 231
++L + + E E R +L ++K L CIV A +L N +
Sbjct: 503 LQSPIDTQILNQLLIKRAEAGE-LREAELLLDK----LVEAGGCIVDTAAVLMINL---Y 554
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G++ A +++ +K P++Y+ T+I +C +C + ++ +++ + +
Sbjct: 555 GRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDA 614
Query: 292 YVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
+ L++ + +F + K +K+GV D +YN LKA +GN A E+YGE
Sbjct: 615 VTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGE 674
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + + K TY+ ++ +F+ A++ E + S+ V + I +S +I+
Sbjct: 675 MQEADIEPSAK----TYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYG 730
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
AG ++A LF+EM G +PN N LL A A F A RL
Sbjct: 731 CAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEA-RLL------------- 776
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+S+M +R P++ TY +LM A +
Sbjct: 777 ---------LSDM------------------------RRKGCPPSSVTYLLLMSAYGSKG 803
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
A L++ M+ GL P+ + +I A G G + A +I ++ G+ ++ +
Sbjct: 804 KPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFR 863
Query: 588 TAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNL 618
T +K+ + + +Q + +++++ + + + NL
Sbjct: 864 TLVKIHLDHGQFEQGWQIYKDLSQSFTVDQNL 895
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 171/390 (43%), Gaps = 58/390 (14%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLG 319
+I++ G G + K+++++ L+ ++ ++YV+N+++ + A +L+ + V+ M++ G
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENG 609
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
M D + +IL+ A G + +A G++K
Sbjct: 610 RMFDAVTVSILVHAYTKEG------------RFKDAAGLMK------------------- 638
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A KV GV +T+ +++ + A +G ++ A+ ++ EM +A EP+++ IL
Sbjct: 639 -RAKKV-------GVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTIL 690
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ + RA + F L+ ++V D I+ + P +
Sbjct: 691 ISLFSKLGDLGRAVQAFE--VLNSSEVG--------ADEIAYSQMIHCYGCAGRPKEAAD 740
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K FKP YN L+ A + + L+++MR G P+ +++ +L+ A
Sbjct: 741 LFQEMETK--GFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSA 798
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G G A +L +M++ G+ PD Y I+ +L A +F E+K I
Sbjct: 799 YGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLE 858
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L + TL++ +G + +Q +Y+D+
Sbjct: 859 LGCFRTLVKIHLDHG---QFEQGWQIYKDL 885
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 193/455 (42%), Gaps = 43/455 (9%)
Query: 200 LCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
L V K + N + YA I+ + + + G+ D V + A+ HL P+ +
Sbjct: 203 LLVEKLEPNFVL-YAIII--------HILNKEGRTEDAVHTFKDMRAAG-HL--PDELLY 250
Query: 260 RTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQK 317
TII G G Y +S A+Y D++ Q + + + + ++NV + +F E MQ+
Sbjct: 251 NTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQR 310
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G +AD Y ++ AG A++I+ E+ L G+L + +Y+++ KV A+A
Sbjct: 311 SGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTL---GLLSHEK-SYTSMAKVRAEAG 366
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
ALK+ + M G+ +TW++L++ G VEQA ++ +M++AG N
Sbjct: 367 RHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGN 426
Query: 438 IL-----LQACVEACQFDRAFRLFRSWTLSKTQVALG---------EDYDGNTDRISNME 483
++ Q +A + R + + G + D T + M+
Sbjct: 427 MINLYSKFQMVEDA---ENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMK 483
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRT 541
+S+ N P + T N L+ +A + + L++++
Sbjct: 484 DDGLESVCNEREMFP------LGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVE 537
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G + ++I+ G G + A + +++ P + Y T IK+C K L++
Sbjct: 538 AGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEE 597
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A +F+ M+ + VT L+ A ++ G +
Sbjct: 598 AIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKD 632
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 159/372 (42%), Gaps = 52/372 (13%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L Y+A ++ P+ ++ RT+I + + ++EDL + + N ++ ++++
Sbjct: 162 LEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHI 221
Query: 301 NAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ + + +K+M+ G + D YN ++ A G ++ +Y ++K +G+
Sbjct: 222 LNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKK---QGI 278
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ FTY+ ++ V++ A + A + +M +G + + + S+IN AGL E+A
Sbjct: 279 VP-SKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAE 337
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + + + + EA + A +LF D
Sbjct: 338 KIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLF--------------------DV 377
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE 538
++ +K +T + N+ F + + T YN +++A
Sbjct: 378 MA-----EKGLLTTRMTW--NTLLHCFVRIGDVEQATKVYNDMVEAG------------- 417
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
S N +++ +I+ VE A +L MRE G+ PD Y + +K+ S
Sbjct: 418 ------SANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDM 471
Query: 599 LKQAFSLFEEMK 610
+ +A + +EMK
Sbjct: 472 IDKATMVVQEMK 483
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V Y+T++ ++ A +A + +ML AGV P+ + ++ A A + + +E
Sbjct: 107 VIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYE 166
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M Q G P++ ++ +A + A L+ + K + I N
Sbjct: 167 AMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFV--LYAIIIHILNK 224
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
E + + ++ + H P YN ++ A Y +AL +M+
Sbjct: 225 EGRTEDAVHTFKDMRAAGHL----------PDELLYNTIICALGKLGRYQESEALYLDMK 274
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ P+ ++TI+I+ +G A + L M+ G D V Y + I + ++ +
Sbjct: 275 KQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYE 334
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+A +F+EM + + +Y ++ + R+ G E + V
Sbjct: 335 EAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDV 377
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 50/277 (18%)
Query: 372 VFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
V + + W+ A + E M L +P+ I +++L+ AG + A EML AG E
Sbjct: 80 VLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVE 139
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ +L+A + W E YD + M +
Sbjct: 140 PDEVAGGCMLEA-------------YARW----------ERYDTLLEFYEAMRQR----- 171
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
VP++H Y ++ ALM ++ L PN
Sbjct: 172 ----GLVPSAH---------------VYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNF 212
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ + I+I G E A+ K MR G PD + Y T I + R +++ +L+ +
Sbjct: 213 VLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLD 272
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
MK I P+ TY ++ S+ G + LA Q
Sbjct: 273 MKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQ 309
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 17/250 (6%)
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
+IN GL ++A LF + + P+ N +++ C + + A +F +
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEEN- 608
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
G +D T +S + H + T F + K+ T YN +K
Sbjct: 609 -----GRMFDAVT--VSILVH----AYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLK 657
Query: 524 ACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A AL EM+ + P+ ++TILI G++ A+Q +++ +
Sbjct: 658 ANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGA 717
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D +AY+ I + R K+A LF+EM+ +PN V Y LL A +R G E + L
Sbjct: 718 DEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLL 777
Query: 642 AVYQDMWKAG 651
+ DM + G
Sbjct: 778 S---DMRRKG 784
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM G+ P+ ++ +++A + L+ + MR+ G+ P Y T I +
Sbjct: 130 LSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYK 189
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++R A L+E++ +++PN V Y ++ ++ G + + ++DM AG
Sbjct: 190 AERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEG---RTEDAVHTFKDMRAAG 242
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 150/353 (42%), Gaps = 57/353 (16%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N ++ ++V + ++K G D+ +YN ++ C A A ++ +K K +
Sbjct: 124 NMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMK----KRGFE 178
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV TY+ ++ F +AL+V + +L P IT++ LI A G +++AM L
Sbjct: 179 PDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKL 238
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+EML G P+ N+++ + DRAF +SK G
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR--ISKNGCVAG----------- 285
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNE 538
+TYNIL++ + + + LM++
Sbjct: 286 ----------------------------------VSTYNILLRDLLNEGKWEYGEKLMSD 311
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN I+++ LI A G ++ A +LK+M+E ++PD +Y I R +
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A ++M P++++Y ++L + + G+ E L +++ + + G
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEA---LNIFEKLGEVG 421
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 184/489 (37%), Gaps = 94/489 (19%)
Query: 192 DEEFRIVQLCVN---KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
DE +Q VN KPDV IL ++ F + + A++ + +
Sbjct: 94 DESLYFLQHMVNRGYKPDV--------------ILCTKLIKGFFNMKKIEKAIQVMEILE 139
Query: 249 KHLSSPNMYICRTIIDVCGICG-----------DYMKSRAIYEDLRSQNV---------- 287
KH P+++ +I G C D MK R D+ + N+
Sbjct: 140 KH-GKPDVFAYNAVIS--GFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 288 -TLNIYVFNSLMNVNAHDLKFT-----------------LEVYKNMQKLGVMADMASYNI 329
L + V + L+ N T +++ M G+ D +YN+
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G A E + +K V TY+ +++ + W+ K+ DM
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRI----SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
L G PN IT+S+LI A G +++A ++ + M + P+ + L+ A +
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372
Query: 450 DRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
D A LS + +GN D N+ K + P
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE--VGCP------- 423
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
P +YN L A + +++AL + EM + G+ P+ I++ LI
Sbjct: 424 -----------PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLC 472
Query: 560 GSGNVEGALQILKIMRE-DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G V+ A+++L M E + P V++Y T + + +R+ A + M + PN
Sbjct: 473 RDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNE 532
Query: 619 VTYITLLRA 627
TY L++
Sbjct: 533 TTYTLLIQG 541
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 205/475 (43%), Gaps = 39/475 (8%)
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSA 240
+ E L + + E ++ L D L+IR+ V RE +R L
Sbjct: 44 MTELLLSISQTQNELQLYSLLSPYKDRQLSIRFMVSV---------ISRESDWQRSLALL 94
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
D ++ SP+++ ++ + + +++++R++ + + Y +++L+
Sbjct: 95 DWINDIAR---YSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITH 151
Query: 301 NAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
F ++ + M++ V D+ Y+ L++ + A I+ +K G+
Sbjct: 152 FGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKR---SGI 208
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ D+ Y++++ VF AK ++ A + ++M GV P+T+++S+L++ +A+
Sbjct: 209 MP-DLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEAL 267
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F EM +A C + CN+++ + A RLF W++ K + R
Sbjct: 268 SVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLF--WSMRKMGIEPNVVSYNTLLR 325
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ T F H ++ + TYN ++K KA LM
Sbjct: 326 VYG----------ETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLM 375
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ G+ PN I+++ +I G +G ++ A + + +R G+ D V Y T I RS
Sbjct: 376 QEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERS 435
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ A L E+KH P+ + T ++ +R G +++ V++ + AG
Sbjct: 436 GLVAHAKRLLHELKH----PDSIPRETAIKILARAG---RIEEATWVFRQAFDAG 483
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 103/236 (43%), Gaps = 10/236 (4%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ +R +G+ A+ + +K N+ T+I V G ++ K+ + ++++
Sbjct: 320 YNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQ 379
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
++ + N +++++++ A L +++ ++ GV D Y ++ A +G
Sbjct: 380 NRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVA 439
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A+ + E+KH D T +K+ A A + A V AG + +
Sbjct: 440 HAKRLLHELKHP--------DSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVF 491
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++ + + +FE+M AG P+S ++L A + +F++A L++
Sbjct: 492 GCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYK 547
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 174/380 (45%), Gaps = 33/380 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTL 309
PN++ +I+ G K+R + ED++ + N+ +N+L++ + + +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 310 E-VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ V K M + V ++ ++NIL+ N + +++ E+ + +K +V +Y++
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD----VKPNVISYNS 336
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + A+ +++ M+SAGV PN IT+++LIN ++++A+ +F + G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEHK 485
P ++ N+L+ A + + D F L +G Y+ R N+E
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT-YNCLIAGLCRNGNIEAA 455
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFK-PTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
K FD+ S P T++ILM+ C KA L+ EM +
Sbjct: 456 KKL----------------FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQ 601
GL P H+++ I++ GN++ A + M +E + +V +Y ++ + +L+
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 602 AFSLFEEMKHYQIQPNLVTY 621
A L EM + PN +TY
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 155/372 (41%), Gaps = 75/372 (20%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++ + + N++ FN ++N + +V ++M+ G ++ SYN L+ C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKL----DVFTYSTIVKVFADAKW----WQMALKVKE 387
G G K +A VLK DV T + D W ++KV +
Sbjct: 270 KLG---------GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML V PN I+++SLIN N G + +A+ + ++M+ AG +PN N L+ +
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F S K Q A+
Sbjct: 381 MLKEALDMFGS---VKGQGAV--------------------------------------- 398
Query: 508 RFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
PTT YN+L+ A C D + AL EM G+ P+ ++ LI +G
Sbjct: 399 -----PTTRMYNMLIDAYCKLGKIDDGF---ALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N+E A ++ + G+ PD+V + ++ R ++A L +EM ++P +TY
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 623 TLLRARSRYGSL 634
+++ + G+L
Sbjct: 510 IVMKGYCKEGNL 521
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 135/331 (40%), Gaps = 39/331 (11%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ +ID + S +++++ Q+V N+ +NSL+N N + +
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M GV ++ +YN L+ C A +++G VK A ++ Y+ ++
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM----YNMLI 408
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +KE+M G+ P+ T++ LI G +E A LF+++ G
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNM 482
P+ +IL++ + +A L + + L+ V G +GN +NM
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMR 540
+ +K + +YN+L++ A L+NEM
Sbjct: 528 R-------------------TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 541 TVGLSPNHISWTILIDACGGSG---NVEGAL 568
GL PN I++ I+ + G ++EG L
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 507 KRFSFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
K + P +YN L+ C Y+ A++ EM +SPN ++ ILID
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
N+ G++++ K M + + P+V++Y + I ++ +A S+ ++M +QPNL+TY
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 622 ITLLRARSRYGSLHE 636
L+ + L E
Sbjct: 370 NALINGFCKNDMLKE 384
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 23/263 (8%)
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V ++M+ + PN T++ +INA G + +A + E+M GC PN N L+
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG-- 267
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS 504
C+ +++++ + K V D N + + F + +
Sbjct: 268 -YCKLGGNGKMYKADAVLKEMVE--NDVSPNLTTFNIL----------IDGFWKDDNLPG 314
Query: 505 FDKRF------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
K F KP +YN L+ C +A + ++M + G+ PN I++ LI+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+ ++ AL + ++ G P Y I + ++ F+L EEM+ I P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 617 NLVTYITLLRARSRYGSLHEVQQ 639
++ TY L+ R G++ ++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKK 457
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGV 320
+ G+C G+ ++ +++ L S+ + ++ F+ LM + + + K M K+G+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+YNI++K C GN A + + +E + L+++V +Y+ +++ ++ +
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQ---MEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ-AMHLF 421
A + +ML G+ PN IT+ + + G V HLF
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
V+ + EM + PN ++ ++I+A +G + A +++ M+ G SP+VV+Y T I
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 592 VCVR---SKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ + ++ +A ++ +EM + PNL T+ L+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + + F K L AL + + K + P + +ID G A+ E+
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + ++ +N L+ +++ +++ + G + D+ +++IL++ C G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG-VTPNT 398
+ A + E+ +K LK TY+ ++K + + A ++ M + N
Sbjct: 486 SRKAAMLLKEM----SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+++ L+ + G +E A L EML+ G PN I+ + V+
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + P+V + I ++ ++ +A + E+MK Y PN+V+Y TL+
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 630 RYGSLHEVQQCLAVYQDM 647
+ G ++ + AV ++M
Sbjct: 270 KLGGNGKMYKADAVLKEM 287
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 162/369 (43%), Gaps = 28/369 (7%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S L++ VF L+N + LK E+ + G++ ++ +Y ++ C +G
Sbjct: 303 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 362
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+A E+ +K +E G + + +TY++++ K A+ + M G+ PN I
Sbjct: 363 VDIALEV---LKMMERDGC-QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++L+ + + A LFE M Q G +P+ +L A +A + + A+
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 478
Query: 460 TLSKTQVAL-----GEDYDGNTDRISNMEHK--DKQSITNTPNFVPNSHYSSFDKRFS-- 510
++ T+V G GNTD + + + D+ ++ + H KR +
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 538
Query: 511 -----------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
K T Y IL+ + + K + NEM + G P+ ++T+ I++
Sbjct: 539 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 598
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G +E A ++ M +G++PDVV Y I C + +AFS + M +PN
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658
Query: 618 LVTYITLLR 626
TY LL+
Sbjct: 659 YWTYCLLLK 667
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 183/434 (42%), Gaps = 59/434 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+ + ++ + K+ DL +A R + + P + C + V G C G+ K+ ++
Sbjct: 69 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLF 126
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ N Y + L+ +A ++ L ++ M++ G ++ ++ L+ C +
Sbjct: 127 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 186
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A+ ++ + GV+ V TY+ ++ ++ ALK+KE M G P+
Sbjct: 187 GRVGDARLLFDAMPQ---NGVVP-SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++LI + E+A L ++ G P L+ A +FD A R+
Sbjct: 243 DWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
SK ++ D I+++ KD+
Sbjct: 302 KMMSSKCKL----DLQVFGKLINSLIKKDRLK---------------------------- 329
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
K L+NE+ GL PN I++T +ID SG V+ AL++LK+M D
Sbjct: 330 -------------EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G P+ Y + + V+ K+L +A +L +M+ I PN++TY TLL+ + H+
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC---DEHDF 433
Query: 638 QQCLAVYQDMWKAG 651
+++ M + G
Sbjct: 434 DNAFRLFEMMEQNG 447
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 172/421 (40%), Gaps = 53/421 (12%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A+ ++ + N+ + +L+ + HD +++ M++ G+ D +Y +L
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C AG A+E Y + KGV V+ Y+T++ F+ A A + E M+
Sbjct: 460 DALCKAGR---AEEAYSFIVR---KGVALTKVY-YTTLIDGFSKAGNTDFAATLIERMID 512
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP++ T+S L++A + +A+ + ++M G + IL+ + + D
Sbjct: 513 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 572
Query: 452 AFRLFRSWTLS------KTQVALGEDY------DGNTDRISNMEHKDKQSITNTPNFVPN 499
A R++ T S T Y + D I ME + T N + +
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 500 S--HYSSFDKRFSF---------KPTTTTYNILMKACCTD---YYR-------------- 531
H D+ FS +P TY +L+K Y R
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 692
Query: 532 -VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L+ M GL+P +++ LI +G +E A +L M G+SP+ YT I
Sbjct: 693 ITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K C +K ++A S M QP L +Y L+ G +V+ +++ D+ +
Sbjct: 753 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVK---SLFCDLLEL 809
Query: 651 G 651
G
Sbjct: 810 G 810
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 184/460 (40%), Gaps = 80/460 (17%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL + K+ SPN+ +I G+C G +R +++ + V ++ +N++
Sbjct: 157 ALVLFLMMKRDGCSPNVRAFTFLIS--GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 214
Query: 298 M--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+ + L++ + M+K G D +YN L+ C T A+E+
Sbjct: 215 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA----V 269
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA----------------------- 392
K V T++ ++ + A+ + AL++K M+S+
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329
Query: 393 ------------GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ PN IT++S+I+ +G V+ A+ + + M + GC+PN+ N L+
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 389
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
V+ + +A L L+K Q DG + IT T
Sbjct: 390 YGLVKDKKLHKAMAL-----LTKMQK------DGIIPNV----------ITYTTLLQGQC 428
Query: 501 HYSSFDKRF---------SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISW 551
FD F KP Y +L A C +A +R G++ + +
Sbjct: 429 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK-GVALTKVYY 487
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
T LID +GN + A +++ M ++G +PD Y+ + + KRL +A + ++M
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I+ + Y L+ R G ++ +Y +M +G
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKR---MYNEMTSSG 584
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 69/280 (24%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK--- 371
M++ GV D+ +YNIL+ C G+ + +K + + + +TY ++K
Sbjct: 615 MEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC-EPNYWTYCLLLKHLL 670
Query: 372 ---------VFADAKWWQMALKVK----EDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
V W + L + E M+ G+ P T+SSLI AG +E+A
Sbjct: 671 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 730
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L + M G PN +L++ C + F++A
Sbjct: 731 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL------------------------- 765
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
+FV S F+P +Y +L+ C D+ +VK+L
Sbjct: 766 ----------------SFV------SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 803
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
++ +G + + ++W IL D +G V+ Q+L IM +
Sbjct: 804 CDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 843
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 136/360 (37%), Gaps = 31/360 (8%)
Query: 302 AHDLKFTLEVYKNMQKLG---VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
A D++ + + + +++ G + YN L++ T +Y + L G+
Sbjct: 8 AEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQ---LVQDGL 64
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L D TY+T++K + A + +L G+ P T T ++L+ G + +A
Sbjct: 65 LP-DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKAC 123
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF------------RSWTLSKTQV 466
LF M GC+ N IL+Q +A +A LF R++T + +
Sbjct: 124 WLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGL 183
Query: 467 ALGEDYDGNTDRISNMEHKD--KQSITNTPNFVPNSHYSSFDKRFSFK---------PTT 515
M +T V S + K P
Sbjct: 184 CKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 243
Query: 516 TTYNILMKACCTDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYN L+ C + L+N G +P +++T LI+ + + AL++ M
Sbjct: 244 WTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
D+ + I ++ RLK+A L E+ + PN++TY +++ + G +
Sbjct: 304 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 363
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N +L T ++ + M K G+ + +Y+ L+ C AG +E + H+ KG L
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL---EEACLLLDHMCGKG-LS 742
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ Y+ ++K D K+++ AL M G P ++ L+ N G E+ L
Sbjct: 743 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 802
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
F ++L+ G + IL ++A D F++
Sbjct: 803 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 294 FNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
FN+L+N A +++ +V + M++ G+ +YN L+K +AG + ++ +
Sbjct: 145 FNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKL---LD 201
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G +K ++ TY+ +++ + A V M ++G+ P+ +T++++ A A
Sbjct: 202 LMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQN 261
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTLSKTQVAL 468
G QA + EM + +PN + C I++ + A R + + + L
Sbjct: 262 GKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVL 321
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
+G D + D+ + + + F +P TY+ +M A
Sbjct: 322 NSLVNGFVDMM------DRDGVDEVLKLM---------EEFQIRPDVITYSTIMNAWSQA 366
Query: 529 YY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + K + N M G+ P+ +++IL + +E A ++L +M + G+ P+VV +
Sbjct: 367 GFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIF 426
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
TT I R+ A +F++M + + PNL T+ TL+
Sbjct: 427 TTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLI 465
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 38/352 (10%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++N+ + G +A+Y LL A + I+ V +E K +K D ++ ++
Sbjct: 94 IFQNLIEGGHQPSLATYTTLLNALT---TQKYFKPIHSIVSLVEEK-QMKPDSIFFNALI 149
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG-C 429
FA++ + A KV + M +G+ P+ T+++LI AG +++M L + M G
Sbjct: 150 NAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNV 209
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISN 481
+PN + N+L++A + A+ + T S Q +A +G T +
Sbjct: 210 KPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEA 269
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
M + + R S KP T I++ C + +AL + M
Sbjct: 270 MILEMQ--------------------RNSLKPNERTCTIIISGYCREGKVQEALRFVYRM 309
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ +G+ PN I L++ + +G ++LK+M E + PDV+ Y+T + ++ L
Sbjct: 310 KDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFL 369
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ M ++P+ Y L + R + + ++ L V M K+G
Sbjct: 370 EKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTV---MTKSG 418
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIYVFNSLMN--VNAHDLKFTL 309
PN C II G C + A+ R +++ + N+ V NSL+N V+ D
Sbjct: 281 PNERTCTIIIS--GYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVD 338
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV K M++ + D+ +Y+ ++ A AG +EIY + K +K D YS +
Sbjct: 339 EVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNM----LKSGVKPDAHAYSIL 394
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
K + A+ + A ++ M +GV PN + ++++I+ + G ++ AM +F++M + G
Sbjct: 395 AKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGV 454
Query: 430 EPNSQCCNILLQACVEACQ 448
PN + L+ EA Q
Sbjct: 455 SPNLKTFETLIWGYAEAKQ 473
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I+ + RE GK ++ ALR K PN+ + ++++ G D M + E
Sbjct: 288 IIISGYCRE-GKVQE---ALRFVYRMKDLGMQPNLIVLNSLVN--GFV-DMMDRDGVDEV 340
Query: 282 LR---SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
L+ + ++ ++++MN A L+ E+Y NM K GV D +Y+IL K
Sbjct: 341 LKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVR 400
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A A+E+ + K + +V ++T++ + A++V + M GV+P
Sbjct: 401 AQEMEKAEEML----TVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSP 456
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N T+ +LI A A +A + + M + +P ++ +A A +RA L
Sbjct: 457 NLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLL 516
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
R+ +K ++G+D D ++S E ++ TN P
Sbjct: 517 RT-VKAKMANSIGKD-DNKPAKMS--EKIYQKPHTNAP 550
>gi|298712181|emb|CBJ33053.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 845
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ +V T++ ++ A W+ AL + ML+ + PN +++S I AC AG EQA++
Sbjct: 517 RPNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAPNATSYTSAIAACGFAGEWEQALN 576
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L + + + N ++AC EA +F+ A + R
Sbjct: 577 LLRALKKGEGKLGVGAYNAAIKACGEAGRFEEAVGILR---------------------- 614
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMN 537
ME I SS R + +P TTY + AC +Y R L+
Sbjct: 615 -EMEADVGLEIP-----------SSSTTRTTSRPDVTTYTAAIAACGRAGEYRRAVLLLR 662
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
EM TVG++P+ IS+ + ACG SG E +L +L+ M + G+SPDVV++ + + +
Sbjct: 663 EMPTVGITPSGISYNAAMTACGRSGQWELSLSLLREMAKLGVSPDVVSFNSVMSALGDAG 722
Query: 598 RLKQAFSLFEEMKHY----QIQPNLVTYITLLRARSRYGSLHEV 637
++A L E+ ++P+ V++ T +RA G L +
Sbjct: 723 EWERAVGLLGEISGSGGGDAVRPDYVSFATAIRACEMAGRLDDA 766
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 22/292 (7%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHL-EAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+ + ++ AC G A E+ +K + + G LK D+ S + A W+ AL+
Sbjct: 144 TMSAVITACGRCGQGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEWEAALR 203
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-NSQCCNILLQAC 443
V +D+ +AG+ P++ + + I AC N +E A+ L +M + P + N + AC
Sbjct: 204 VLDDLRAAGIKPDSFVYRAAITACGNGDKLEMALQLLRDMREDPDVPVDVASFNAAITAC 263
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSITNTPNFVPNSH 501
Q+ RA L R T L Y + D + + P
Sbjct: 264 GRCKQWQRAISLLREITTEGLAPGL-VSYGAAITACATCNQGDAAVELLRELPIV----- 317
Query: 502 YSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNE--MRTVGLSPNHISWTILIDA 557
P + Y ++ AC + R L E M VG P+ +S++ +I A
Sbjct: 318 --------GITPDSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITA 369
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
G G E AL+ L+ M + G+ PDVV + +A+ C +S R ++A L EM
Sbjct: 370 LGEGGQWEEALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLREM 421
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 53/319 (16%)
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG--------VTPNTITWSSLINACANAG 412
+ V+ Y+ + + K W+ AL+V + M++A +TPN T S++I AC G
Sbjct: 97 MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAVITACGRCG 156
Query: 413 LVEQAMHLFEEML-----QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ A+ + E M G +P+ C + + A A +++ A R+ A
Sbjct: 157 QGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEWEAALRVLDDLR------A 210
Query: 468 LGEDYD-----------GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
G D GN D++ M + + + P+ VP
Sbjct: 211 AGIKPDSFVYRAAITACGNGDKL-EMALQLLRDMREDPD-VPVD--------------VA 254
Query: 517 TYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
++N + AC C + R +L+ E+ T GL+P +S+ I AC + A+++L+ +
Sbjct: 255 SFNAAITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLREL 314
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI--QPNLVTYITLLRARSRYG 632
G++PD + YT+ I C R+ + ++A LF E+ ++ +P+ V+Y ++ A G
Sbjct: 315 PIVGITPDSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITALGEGG 374
Query: 633 SLHEVQQCLAVYQDMWKAG 651
E L ++M +AG
Sbjct: 375 QWEEA---LRFLREMPQAG 390
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 263 IDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGV 320
I CG C + ++ ++ ++ ++ + + + + + A + +E+ + + +G+
Sbjct: 260 ITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLRELPIVGI 319
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D Y ++ AC AG A +++ E+ L + D +YS ++ + W+
Sbjct: 320 TPDSMVYTSVISACGRAGQWERAVDLFREISMLRVG--FRPDAVSYSAVITALGEGGQWE 377
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
AL+ +M AGV P+ + ++S + ACA +G E+A L EMLQA
Sbjct: 378 EALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLREMLQA 424
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 11/225 (4%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK-SRAIYEDLRSQ-NVTLNIYVFNS 296
+ALR D + P+ ++ R I CG GD ++ + + D+R +V +++ FN+
Sbjct: 200 AALRVLDDLRAAGIKPDSFVYRAAITACG-NGDKLEMALQLLRDMREDPDVPVDVASFNA 258
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + + + + + G+ + SY + AC A E+ ++ L
Sbjct: 259 AITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVEL---LRELP 315
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED--MLSAGVTPNTITWSSLINACANAG 412
G+ D Y++++ A W+ A+ + + ML G P+ +++S++I A G
Sbjct: 316 IVGITP-DSMVYTSVISACGRAGQWERAVDLFREISMLRVGFRPDAVSYSAVITALGEGG 374
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
E+A+ EM QAG +P+ C N + AC ++ +++ A L R
Sbjct: 375 QWEEALRFLREMPQAGVKPDVVCFNSAVTACAKSGRWEEAGGLLR 419
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 132/331 (39%), Gaps = 57/331 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRS-----QNVTLNIYVFNSLMNVNAHDLKF 307
+PN+ +I CG CG + + E +++ + +++ ++ ++ ++
Sbjct: 139 TPNVNTMSAVITACGRCGQGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAGEW 198
Query: 308 --TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L V +++ G+ D Y + AC +A ++ ++ + + +DV +
Sbjct: 199 EAALRVLDDLRAAGIKPDSFVYRAAITACGNGDKLEMALQL---LRDMREDPDVPVDVAS 255
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++ + K WQ A+ + ++ + G+ P +++ + I ACA + A+ L E+
Sbjct: 256 FNAAITACGRCKQWQRAISLLREITTEGLAPGLVSYGAAITACATCNQGDAAVELLRELP 315
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
G P+S ++ AC A Q++RA LFR IS +
Sbjct: 316 IVGITPDSMVYTSVISACGRAGQWERAVDLFR--------------------EISML--- 352
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVG 543
R F+P +Y+ ++ A +AL + EM G
Sbjct: 353 ----------------------RVGFRPDAVSYSAVITALGEGGQWEEALRFLREMPQAG 390
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIM 574
+ P+ + + + AC SG E A +L+ M
Sbjct: 391 VKPDVVCFNSAVTACAKSGRWEEAGGLLREM 421
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA------HDLKF 307
PN+ + G G++ ++ + + ++ + N + S + L
Sbjct: 518 PNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAPNATSYTSAIAACGFAGEWEQALNL 577
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------ 361
+ K KLGV A YN +KAC AG +E G ++ +EA L++
Sbjct: 578 LRALKKGEGKLGVGA----YNAAIKACGEAGRF---EEAVGILREMEADVGLEIPSSSTT 630
Query: 362 ------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
DV TY+ + A ++ A+ + +M + G+TP+ I++++ + AC +G E
Sbjct: 631 RTTSRPDVTTYTAAIAACGRAGEYRRAVLLLREMPTVGITPSGISYNAAMTACGRSGQWE 690
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ L EM + G P+ N ++ A +A +++RA L + S A+ DY
Sbjct: 691 LSLSLLREMAKLGVSPDVVSFNSVMSALGDAGEWERAVGLLGEISGSGGGDAVRPDY 747
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
P++ I CG G+Y ++ + ++ + +T + +N+ M + + +L +
Sbjct: 636 PDVTTYTAAIAACGRAGEYRRAVLLLREMPTVGITPSGISYNAAMTACGRSGQWELSLSL 695
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M KLGV D+ S+N ++ A AG A + GE+ ++ D +++T ++
Sbjct: 696 LREMAKLGVSPDVVSFNSVMSALGDAGEWERAVGLLGEISGSGGGDAVRPDYVSFATAIR 755
Query: 372 VFADAKWWQMALKVKEDMLSAGVTP 396
A A ++ + S G+ P
Sbjct: 756 ACEMAGRLDDAAGLRAEAASLGLLP 780
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 59/347 (17%)
Query: 290 NIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+ Y FNSL+ + + +++ M G D+ SY L++ C AG A E++
Sbjct: 9 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
GE+ + D+ Y+ +VK +A+ + L + M G P+T ++++++
Sbjct: 69 GEMD--------QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
++A + +EM + G P C ++ A + + A R+ L
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR----- 175
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
KP TYN L++ C
Sbjct: 176 ------------------------------------------GCKPNVWTYNALVQGFCN 193
Query: 528 D--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ ++ L+N+MR G++P+ +++ +LI G++E A ++L++M DG+ D
Sbjct: 194 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 253
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
Y I + R QA SLF+ ++ I+PN VT+ +L+ + G
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 172/415 (41%), Gaps = 37/415 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + C +I+ G + + E ++ + N++ +N+L+ N + +
Sbjct: 143 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ GV D +YN+L++ C+ G+ + + ++ +E G++ D +TY+ ++
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHI---ESAFRLLRLMEGDGLIA-DQYTYNALI 258
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A + + + + G+ PN +T++SLIN +G + A E+M+ AGC
Sbjct: 259 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 318
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ + ++ C+ + LS L +D +T + + HK +
Sbjct: 319 PDTYTYSSFIE---HLCKMKGSQE-----GLSFIGEMLQKDVKPSTVNYTIVIHK----L 366
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNH 548
N+ + P TY M+A C + + ++ EM G++ +
Sbjct: 367 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 426
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK----------- 597
+++ L+D G + A+ ILK M P+ Y ++ VR +
Sbjct: 427 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 486
Query: 598 ------RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
L F LF+ MK + PN TY ++L S G E +++ ++
Sbjct: 487 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 541
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
NA + L + + M++LG +Y ++ C A+E+ ++ + KG+
Sbjct: 88 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM---LQEMFEKGLAP 144
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
V T + ++ + AL+V E M G PN T+++L+ N G V +AM L
Sbjct: 145 C-VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 203
Query: 421 FEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M G P++ N+L++ C++ + AFRL R L + + + Y N +
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDG-HIESAFRLLR---LMEGDGLIADQYTYNA--L 257
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
N KD ++ S + S + R KP T+N L+ C A +
Sbjct: 258 INALCKDGRTDQAC------SLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLE 310
Query: 538 EMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M + G +P+ +++ I+ C G+ EG I +++++D + P V YT I ++
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD-VKPSTVNYTIVIHKLLKE 369
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + EM P++VTY T +RA G L+E + L
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 414
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 180/451 (39%), Gaps = 66/451 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQ 285
+ + K+ + ALR + K PN++ ++ G C G K+ + +R+
Sbjct: 153 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ--GFCNEGKVHKAMTLLNKMRAC 210
Query: 286 NVTLNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
V + +N L+ ++ H ++ + + M+ G++AD +YN L+ A C G T
Sbjct: 211 GVNPDAVTYNLLIRGQCIDGH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A ++ LE +G+ K + T+++++ + +A K E M+SAG TP+T T+S
Sbjct: 270 ACSLF---DSLETRGI-KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 403 SLINACANAGLVEQAMHLFEEMLQ-----------------------------------A 427
S I ++ + EMLQ +
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Query: 428 GCEPNSQCCNILLQA-CVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDR 478
GC P+ ++A C+E + + A + T++ + G G TD
Sbjct: 386 GCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 444
Query: 479 ISNMEHKDKQSITNTPN----FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
++ K S+ + PN F+ H P T + TD +
Sbjct: 445 AVSI-LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA-GVWKAIELTDVF---G 499
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L + M+ PN +++ +++ G E A ++ +M+ED +S + YT +
Sbjct: 500 LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 559
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+SKR A+ L M + P L++Y LL
Sbjct: 560 KSKRYLDAWVLVCSMIQHGFIPQLMSYQHLL 590
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 18/242 (7%)
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+ +G P+ T++SLI V+ A LF++M G + L++ EA +
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
D A LF + Y + N E ++ + K
Sbjct: 61 IDEAVELFGEMDQPDMHM-----YAALVKGLCNAERGEEGLLMLRRM-----------KE 104
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
++P+T Y ++ C + +A ++ EM GL+P ++ T +I+A G +
Sbjct: 105 LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 164
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L++M+ G P+V Y ++ ++ +A +L +M+ + P+ VTY L+R
Sbjct: 165 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 224
Query: 627 AR 628
+
Sbjct: 225 GQ 226
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 160/378 (42%), Gaps = 21/378 (5%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G + ++ + ++ + + L + N + V + + V+ M+ GV D SY
Sbjct: 175 GKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSY 234
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
++ A C G + +K + +G + +D T + ++ F + + +
Sbjct: 235 KLMAIAYCRMGRI---SDTDRWLKDMVRRGFV-VDNATCTLMISTFCEKGFASRVFWYFD 290
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ G+ PN I ++SLIN G ++QA + EEM++ G +PN L+ +
Sbjct: 291 KWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKG 350
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD-KQSITNTPNFVPNSHYSSFD 506
++AFRLF ++ +DY N ++M H K+ N + +
Sbjct: 351 WTEKAFRLF-------LKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRM----- 398
Query: 507 KRFSFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
K P T TY L+ + ++ + LM+ M G S N ++ ID+ G
Sbjct: 399 KEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF 458
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
A ++LK G+ D V YT I R ++A F +M +QP++ TY TL
Sbjct: 459 LEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTL 518
Query: 625 LRARSRYGSLHEVQQCLA 642
+ A SR + E ++ A
Sbjct: 519 IAAFSRQRRMEESEKLFA 536
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 137/341 (40%), Gaps = 23/341 (6%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F SL+N +K E+ + M K G ++ ++ L+ C G T A ++
Sbjct: 300 NLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 359
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ + K +V TY++++ + A + M G+ PNT T++ LI+
Sbjct: 360 LKLVRSDD---YKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDG 416
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ AG E+A L + M + G N N + + + +F A +L K
Sbjct: 417 HSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL------KKGFR 470
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMKAC 525
LG D T I E + F F K F +P TYN L+ A
Sbjct: 471 LGLQADTVTYTILISELCRRADTREALVF--------FSKMFKAGVQPDMHTYNTLIAAF 522
Query: 526 CTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L E +GL P ++T +I NV AL+ M + G +PD
Sbjct: 523 SRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDS 582
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
+ Y I + +L +A L+E M + P VT +TL
Sbjct: 583 LTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTL 623
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 19/276 (6%)
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V+VFA+ +Q A+ + +M + G+ T + + GLV A ++F+EM G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+S ++ + C+ R R W + D T IS K
Sbjct: 227 VCPDSVSYKLM---AIAYCRMGRISDTDR-WLKDMVRRGFVVDNATCTLMISTFCEKGFA 282
Query: 489 SITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGL 544
S + FDK KP + L+ C +A ++ EM G
Sbjct: 283 SRV----------FWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW 332
Query: 545 SPNHISWTILIDACGGSGNVEGALQI-LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN + T LID G E A ++ LK++R D P+V YT+ I + +L +A
Sbjct: 333 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAE 392
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L MK + PN TY L+ S+ G+ + +
Sbjct: 393 MLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYE 428
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN +ID G++ K+ + + + + + NI+ +N+ ++ +F LE K
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF-LEACK 463
Query: 314 NMQK---LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++K LG+ AD +Y IL+ C +T A + ++ K ++ D+ TY+T++
Sbjct: 464 LLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM----FKAGVQPDMHTYNTLI 519
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F+ + + + K+ + + G+ P T++S+I V A+ F M GC
Sbjct: 520 AAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCT 579
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWT---LSK---TQVALGEDYDGNTDRISNM-- 482
P+S L+ + + D A +L+ + LS T++ L +Y D + M
Sbjct: 580 PDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVI 639
Query: 483 -EHKDKQSITNTPN 495
E DK+ T N
Sbjct: 640 LERLDKKLWIRTVN 653
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 184/418 (44%), Gaps = 36/418 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P MY C I V G K++A+++ + + + + SL+ +++ E+
Sbjct: 347 PYMYDC--CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K ++ +Y ++K C +G+ A Y VK + A G + +V Y+T++K
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGC-RPNVVIYTTLIK 460
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A++V ++M G+ P+ ++SLI + A +++A EM++ G +P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 432 NSQCCNILLQACVEACQF---DRAFRLFRSWTLSKTQV---ALGEDYDGNTDRISNMEH- 484
N+ + +EA +F D+ + R + +V L +Y I
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAY 580
Query: 485 ---------KDKQSITNTPN-FVPNSHYSSFDKRF------SFKPTTTTYNILMKACCT- 527
D ++ T N N ++ F P +Y +L+
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + ++ +EM GL+PN I + +L+ SG +E A ++L M G+ P+ V Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
T I +S L +AF LF+EMK + P+ Y TL+ R L++V++ + ++
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIF 755
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/535 (20%), Positives = 213/535 (39%), Gaps = 103/535 (19%)
Query: 114 EMVASG----------IVKS-IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNEC 162
EM+ASG ++K+ ++ R + VLK++ E G+AP ++F + + ++
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP-DIFCYNSLIIGLSKA 500
Query: 163 QRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYA-----CIV 217
+R+ E F L+E++E P F + + + A +Y C V
Sbjct: 501 KRM---DEARSF--LVEMVENGLKPNAFTYGAF--ISGYIEASEFASADKYVKEMRECGV 553
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
+L + E+ KK ++ A AY R+++D +
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAY---------------RSMVD-----------QG 587
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
I D ++ V +N N D + E+++ M+ G+ D+ SY +L+
Sbjct: 588 ILGDAKTYTVLMN----GLFKNDKVDDAE---EIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN A I+ E+ + L +V Y+ ++ F + + A ++ ++M G+ PN
Sbjct: 641 GNMQKASSIFDEM----VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+T+ ++I+ +G + +A LF+EM G P+S L+ C +RA +F
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+ K ++T F ++ F F T
Sbjct: 757 T--------------------------NKKGCASSTAPFNALINWV-----FKFGKTELK 785
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L + + R PN +++ I+ID GN+E A ++ M+
Sbjct: 786 TEVLNRLMDGSFDRFG-----------KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ P V+ YT+ + + R + F +F+E I+P+ + Y ++ A + G
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 34/351 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+ N DL + +VYK M + V+ D+ +Y++L+ A C AGN L +++ + +
Sbjct: 192 LLDALLRWNRLDLFW--DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L +D ALK+KE M+ G+ P T+ LI+
Sbjct: 250 EFRTATLNVD------------------GALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+E A L EM G ++ ++L+ ++ D A L + Y
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK-PYMY 350
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYY 530
D +S K+ + + + +S P Y L++ C +
Sbjct: 351 DCCICVMS------KEGVMEKAKALFDGMIAS-----GLIPQAQAYASLIEGYCREKNVR 399
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+ EM+ + + ++ ++ SG+++GA I+K M G P+VV YTT I
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K +++ R A + +EMK I P++ Y +L+ S+ + E + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A + +C + + K DL A R +D K P+ ++ T++D C D ++
Sbjct: 695 PNA-VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-----QKLGVMADMASYNIL 330
I+ + + FN+L+N + EV + + G D+ +YNI+
Sbjct: 754 IF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIM 811
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C GN A+E++ ++++ L V TY++++ + V ++ +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNAN----LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-----LQAGCEPNSQCCNILLQACVE 445
+AG+ P+ I +S +INA G+ +A+ L ++M + GC+ + C LL +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 446 ACQFDRA 452
+ + A
Sbjct: 928 VGEMEVA 934
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 226 NFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
N+V +FGK L R D S PN +ID G+ ++ ++ +++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 285 QNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
N+ + + SL+N +D V+ G+ D Y++++ A G T
Sbjct: 834 ANLMPTVITYTSLLN--GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 341 VLAQEIYGEVKHLEAKGVL----KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A + V + AK + KL + T ++ FA ++A KV E+M+ P
Sbjct: 892 TKALVL---VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 397 NTITWSSLIN 406
++ T LIN
Sbjct: 949 DSATVIELIN 958
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 184/418 (44%), Gaps = 36/418 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P MY C I V G K++A+++ + + + + SL+ +++ E+
Sbjct: 347 PYMYDC--CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K ++ +Y ++K C +G+ A Y VK + A G + +V Y+T++K
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGC-RPNVVIYTTLIK 460
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A++V ++M G+ P+ ++SLI + A +++A EM++ G +P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 432 NSQCCNILLQACVEACQF---DRAFRLFRSWTLSKTQV---ALGEDY----------DGN 475
N+ + +EA +F D+ + R + +V L +Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 476 TDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRF------SFKPTTTTYNILMKACCT- 527
+ D ++ T N N ++ F P +Y +L+
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + ++ +EM GL+PN I + +L+ SG +E A ++L M G+ P+ V Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
T I +S L +AF LF+EMK + P+ Y TL+ R L++V++ + ++
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIF 755
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 21/326 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y++M G++ D +Y +L+ A+EI+ E++ KG+ DVF+Y ++
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR---GKGIAP-DVFSYGVLIN 635
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ Q A + ++M+ G+TPN I ++ L+ +G +E+A L +EM G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD---RISNMEHKDKQ 488
N+ ++ ++ AFRLF L K V Y D R++++E
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 489 SITNTPNFVPNS--HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
TN ++ + + F F T +L + + R P
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-----------KP 803
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ I+ID GN+E A ++ M+ + P V+ YT+ + + R + F +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
+E I+P+ + Y ++ A + G
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 34/351 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+ N DL + +VYK M + V+ D+ +Y++L+ A C AGN L +++ + +
Sbjct: 192 LLDALLRWNRLDLFW--DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L +D ALK+KE M+ G+ P T+ LI+
Sbjct: 250 EFRTATLNVD------------------GALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+E A L EM G ++ ++L+ ++ D A L + Y
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK-PYMY 350
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D +S K+ + + + +S P Y L++ C +
Sbjct: 351 DCCICVMS------KEGVMEKAKALFDGMIAS-----GLIPQAQAYASLIEGYCREKNVR 399
Query: 533 KA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+ EM+ + + ++ ++ SG+++GA I+K M G P+VV YTT I
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K +++ R A + +EMK I P++ Y +L+ S+ + E + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A + +C + + K DL A R +D K P+ ++ T++D C D ++
Sbjct: 695 PNA-VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-----QKLGVMADMASYNIL 330
I+ + + FN+L+N + EV + + G D+ +YNI+
Sbjct: 754 IF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIM 811
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C GN A+E++ ++++ L V TY++++ + V ++ +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNAN----LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-----LQAGCEPNSQCCNILLQACVE 445
+AG+ P+ I +S +INA G+ +A+ L ++M + GC+ + C LL +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 446 ACQFDRA 452
+ + A
Sbjct: 928 VGEMEVA 934
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 226 NFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
N+V +FGK L R D S PN +ID G+ ++ ++ +++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 285 QNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
N+ + + SL+N +D V+ G+ D Y++++ A G T
Sbjct: 834 ANLMPTVITYTSLLN--GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 341 VLAQEIYGEVKHLEAKGVL----KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A + V + AK + KL + T ++ FA ++A KV E+M+ P
Sbjct: 892 TKALVL---VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 397 NTITWSSLIN 406
++ T LIN
Sbjct: 949 DSATVIELIN 958
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 184/418 (44%), Gaps = 36/418 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P MY C I V G K++A+++ + + + + SL+ +++ E+
Sbjct: 347 PYMYDC--CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M+K ++ +Y ++K C +G+ A Y VK + A G + +V Y+T++K
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGC-RPNVVIYTTLIK 460
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F + A++V ++M G+ P+ ++SLI + A +++A EM++ G +P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 432 NSQCCNILLQACVEACQF---DRAFRLFRSWTLSKTQV---ALGEDY----------DGN 475
N+ + +EA +F D+ + R + +V L +Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 476 TDRISNMEHKDKQSITNTPN-FVPNSHYSSFDKRF------SFKPTTTTYNILMKACCT- 527
+ D ++ T N N ++ F P +Y +L+
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ + ++ +EM GL+PN I + +L+ SG +E A ++L M G+ P+ V Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
T I +S L +AF LF+EMK + P+ Y TL+ R L++V++ + ++
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIF 755
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 21/326 (6%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y++M G++ D +Y +L+ A+EI+ E++ KG+ DVF+Y ++
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR---GKGIAP-DVFSYGVLIN 635
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ Q A + ++M+ G+TPN I ++ L+ +G +E+A L +EM G P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD---RISNMEHKDKQ 488
N+ ++ ++ AFRLF L K V Y D R++++E
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 489 SITNTPNFVPNS--HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSP 546
TN ++ + + F F T +L + + R P
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-----------KP 803
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++ I+ID GN+E A ++ M+ + P V+ YT+ + + R + F +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYG 632
+E I+P+ + Y ++ A + G
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 34/351 (9%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+ N DL + +VYK M + V+ D+ +Y++L+ A C AGN L +++ + +
Sbjct: 192 LLDALLRWNRLDLFW--DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L +D ALK+KE M+ G+ P T+ LI+
Sbjct: 250 EFRTATLNVD------------------GALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+E A L EM G ++ ++L+ ++ D A L + Y
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK-PYMY 350
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYY 530
D +S K+ + + + +S P Y L++ C +
Sbjct: 351 DCCICVMS------KEGVMEKAKALFDGMIAS-----GLIPQAQAYASLIEGYCREKNVR 399
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+ EM+ + + ++ ++ SG+++GA I+K M G P+VV YTT I
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
K +++ R A + +EMK I P++ Y +L+ S+ + E + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P A + +C + + K DL A R +D K P+ ++ T++D C D ++
Sbjct: 695 PNA-VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-----QKLGVMADMASYNIL 330
I+ + + FN+L+N + EV + + G D+ +YNI+
Sbjct: 754 IF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIM 811
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C GN A+E++ ++++ L V TY++++ + V ++ +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNAN----LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEM-----LQAGCEPNSQCCNILLQACVE 445
+AG+ P+ I +S +INA G+ +A+ L ++M + GC+ + C LL +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 446 ACQFDRA 452
+ + A
Sbjct: 928 VGEMEVA 934
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 226 NFVREFGKKRDLVSAL-RAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRS 284
N+V +FGK L R D S PN +ID G+ ++ ++ +++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 285 QNVTLNIYVFNSLMNVNAHD----LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
N+ + + SL+N +D V+ G+ D Y++++ A G T
Sbjct: 834 ANLMPTVITYTSLLN--GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 341 VLAQEIYGEVKHLEAKGVL----KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A + V + AK + KL + T ++ FA ++A KV E+M+ P
Sbjct: 892 TKALVL---VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 397 NTITWSSLIN 406
++ T LIN
Sbjct: 949 DSATVIELIN 958
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 187/456 (41%), Gaps = 94/456 (20%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
I F + F + + A+ D + PN+ T+I+ G+C G ++ +
Sbjct: 140 ITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN--GLCLKGRVTEALVLI 197
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + N + ++N + + L++++ M++ + A + Y+I++ + C
Sbjct: 198 DRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKD 257
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA-DAKWWQMALKVKE--------- 387
GN A ++ E +E KG+ K DV YS+I+ D +W A ++E
Sbjct: 258 GNLDDALSLFNE---MEMKGI-KADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313
Query: 388 -------------------------DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+M++ G+ P+TIT+SSLI+ + +A + +
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M+ GCEPN +IL+ + +A + D RLF + SK VA
Sbjct: 374 LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS-SKGLVA--------------- 417
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
T TYN L++ C K L EM
Sbjct: 418 -------------------------------DTVTYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ G+ P+ +++ IL+D +G ++ AL+I + M++ M + Y I + ++
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A+SLF + ++P+++TY ++ + GSL E
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 174/426 (40%), Gaps = 62/426 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
F +KR L+ A + K PN T+I+ G C G ++ A+ + +
Sbjct: 114 FCRKRKLLFAFSVVGRALKFGFEPNTITFSTLIN--GFCLEGRVSEAVALVDRMVEMKYR 171
Query: 289 LNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEI 346
N+ N+L+N + T L + M K G A+ +Y +L C +GNT LA ++
Sbjct: 172 PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL 231
Query: 347 YGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
+ + +E + + K V YS ++ AL + +M G+ + + +SS+I
Sbjct: 232 F---RKMEERSI-KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
N G + + EM+ PN + L+ F + +L + L V
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDV------FVKEGKLLEAKELYNEMV 341
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
A G P T TY+ L+ C
Sbjct: 342 ARG-----------------------------------------IAPDTITYSSLIDGFC 360
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ +A +++ M + G PN ++++ILI++ + V+ +++ + G+ D V
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T ++ +S +L A LF+EM + P++VTY LL G E+Q+ L ++
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNG---ELQKALEIF 477
Query: 645 QDMWKA 650
+ M K+
Sbjct: 478 EKMQKS 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 163/384 (42%), Gaps = 34/384 (8%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+F+++ +DL L K M G+ +M + NI++ C + A + G
Sbjct: 75 LFSAVARRKEYDL--VLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRA-- 130
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
K + + T+ST++ F A+ + + M+ PN +T ++LIN G
Sbjct: 131 --LKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKG 188
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-----SWTLSKTQVA 467
V +A+ L + M++ GCE N +L ++ A LFR S S Q +
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248
Query: 468 LGED---YDGNTDR----ISNMEHKD-KQSITNTPNFVP----NSHYSSFDKRF------ 509
+ D DGN D + ME K K + + + + + K
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308
Query: 510 SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ P T++ L+ + K L NEM G++P+ I+++ LID + A
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Q+L +M G P++V Y+ I ++KR+ LF E+ + + VTY TL++
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ G L+ ++ ++Q+M G
Sbjct: 429 FCQSGKLNVAKE---LFQEMVSRG 449
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 38/289 (13%)
Query: 356 KGVLKLDVFTYSTIVKV-----------FADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
KG L++ + YS I + D K + A+ + E M+ + P+ I +S L
Sbjct: 17 KGTLRISLLHYSCISEAKVSYKERLRNGIVDIKVNE-AIDLFESMIQSRPLPSLIDFSKL 75
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+A A + + +EM G E N NI++ F R +L ++++
Sbjct: 76 FSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINC------FCRKRKLLFAFSVVGR 129
Query: 465 QVALGEDYDGNTDRISN------MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ G ++ NT S +E + +++ V ++P T
Sbjct: 130 ALKFG--FEPNTITFSTLINGFCLEGRVSEAVALVDRMV----------EMKYRPNVVTV 177
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ C +A L++ M G N I++ +++ SGN AL + + M E
Sbjct: 178 NTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEE 237
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ VV Y+ I + L A SLF EM+ I+ ++V Y +++
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 46/266 (17%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
I+P + F + F K+ L+ A Y+ +P+ ++ID G C +
Sbjct: 310 IIPNV-VTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID--GFCKENRLG 366
Query: 276 RA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
A + + + S+ NI ++ L+N A + + ++ + G++AD +YN L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C +G +A+E++ E + ++GV V TY ++ D Q AL++ E M
Sbjct: 427 QGFCQSGKLNVAKELFQE---MVSRGVPP-SVVTYGILLDGLCDNGELQKALEIFEKMQK 482
Query: 392 A-----------------------------------GVTPNTITWSSLINACANAGLVEQ 416
+ GV P+ +T++ +I G + +
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQA 442
A LF +M + GC P+ NIL++A
Sbjct: 543 ADMLFRKMKEDGCAPSDCTYNILIRA 568
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 170/403 (42%), Gaps = 21/403 (5%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
A A + SP + ++D C + A + L + ++I + N L+
Sbjct: 102 ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFC 161
Query: 301 NAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A L++ +LG + D+ SY+ILLK+ C G + A ++ + E V
Sbjct: 162 EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA--EGGAVC 219
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV Y+T++ F A + ++M+ G+ P+ +T+SS+++A A + +A
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDGNT 476
+M+ G P++ N L+ Q+ A R+F R ++ V L
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM 536
E +D P+ FS+K Y K C D + L
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDV--------FSYKIMLNGYAT--KGCLVD---MTDLF 386
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M G++P+ ++++LI A G ++ A+ I MR+ G+ PDVV YTT I R
Sbjct: 387 DLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI 446
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ A F +M + P+ Y L++ +GSL + ++
Sbjct: 447 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 489
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 150/366 (40%), Gaps = 28/366 (7%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G + ++ +++++R ++ ++ N LM +K +V+ M G D+ SY
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I+L G V +++ L + D++T+S ++K +A+ A+ +
Sbjct: 367 KIMLNGYATKGCLVDMTDLF----DLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFN 422
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+M GV P+ +T++++I A G ++ AM F +M+ G P+ + L+Q
Sbjct: 423 EMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 482
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM----EHKDKQSITNTPNFVPNSHYS 503
+A + L + D + I+N+ D Q+I + V H
Sbjct: 483 SLLKA----KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV-GQH-- 535
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGS 561
P Y++LM C KAL + M + G+ PN + + L++
Sbjct: 536 ---------PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G ++ L + + M + G+ P + Y I + R A F EM I N TY
Sbjct: 587 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTY 646
Query: 622 ITLLRA 627
+LR
Sbjct: 647 NIVLRG 652
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 159/382 (41%), Gaps = 58/382 (15%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A + ++ V + + +N+L+ + K + V+K M++ ++ D+ + N+L+
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G A++++ + KG DVF+Y ++ +A + + ML
Sbjct: 336 GSLCKYGKIKEARDVF---DTMAMKG-QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG 391
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P+ T+S LI A AN G++++AM +F EM G +P+ ++ A + D
Sbjct: 392 DGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDD 451
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F Q +
Sbjct: 452 AMEKFNQMI--------------------------DQGVA-------------------- 465
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P Y+ L++ CT + K L+ E+ G+ + + ++ +I+ G + A
Sbjct: 466 -PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I + G PD V Y+ + ++++A +F+ M I+PN+V Y TL+
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC 584
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G + E L+++++M + G
Sbjct: 585 KIGRIDE---GLSLFREMLQKG 603
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++Y +I CG K+ I+ ++R V ++ + +++ K +E
Sbjct: 395 APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAME 454
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV-------------------- 350
+ M GV D +Y+ L++ C G+ + A+E+ E+
Sbjct: 455 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC 514
Query: 351 ---KHLEAKGVLKL--------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ ++A+ + L D YS ++ + + AL+V + M+SAG+ PN +
Sbjct: 515 KLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 574
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+N G +++ + LF EMLQ G +P++ NI++
Sbjct: 575 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 617
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 165/434 (38%), Gaps = 69/434 (15%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
G+ DL+ + A + SP++ T+ID GD K+ +++++ + + ++
Sbjct: 203 GQADDLLRMM----AEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDL 258
Query: 292 YVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
++S+++ A + + M GV+ D +YN L+ G A ++ E
Sbjct: 259 VTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + + DV T + ++ + A V + M G P+ ++ ++N A
Sbjct: 319 MR----RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYA 374
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS--KTQVA 467
G + LF+ ML G P+ ++L++A D+A +F K V
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 434
Query: 468 LGEDYDGNTDRISNME---HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
RI M+ K Q I P Y+ L++
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQ-----------------GVAPDKYAYHCLIQG 477
Query: 525 CCTDYYRVKA-------LMNEMR------------------------------TVGLSPN 547
CT +KA + N MR VG P+
Sbjct: 478 FCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPD 537
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ +++L+D G +E AL++ M G+ P+VV Y T + + R+ + SLF
Sbjct: 538 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Query: 608 EMKHYQIQPNLVTY 621
EM I+P+ + Y
Sbjct: 598 EMLQKGIKPSTILY 611
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 216 IVPRADILFCNFVREFGKKRDLVS----------------ALRAYDASKKHLSSPNMYIC 259
++ +A I+F N +R+ G K D+V+ A+ ++ +P+ Y
Sbjct: 413 MLDKAMIIF-NEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 471
Query: 260 RTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKN 314
+I G C G +K++ + ++ + + L+I F+S++N N L ++ ++
Sbjct: 472 HCLIQ--GFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIIN-NLCKLGRIMDAQNIFDL 528
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+G D Y++L+ CL G A ++ + ++ +V Y T+V +
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM----VSAGIEPNVVVYGTLVNGYC 584
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
L + +ML G+ P+TI ++ +I+ AG A F EM ++G N
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644
Query: 435 CCNILLQACVEACQFDRAFRLFR 457
NI+L+ + FD A LF+
Sbjct: 645 TYNIVLRGFFKNRCFDEAIFLFK 667
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 108/260 (41%), Gaps = 53/260 (20%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++P + T++ L++ C A E A+ F ++L+ G + N LL+ EA + D A
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + TP P
Sbjct: 171 DIL---------------------------------LHRTP-------------ELGCVP 184
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGL--SPNHISWTILIDACGGSGNVEGALQ 569
+Y+IL+K+ C +A L+ M G SP+ +++T +ID G+V A
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G+ PD+V Y++ + +++ + +A + +M + + P+ TY L+
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYG-- 302
Query: 630 RYGSLHEVQQCLAVYQDMWK 649
Y S + ++ + V+++M +
Sbjct: 303 -YSSTGQWKEAVRVFKEMRR 321
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 163/412 (39%), Gaps = 65/412 (15%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y+ + ++ + + + + N N L+N H + F+ V + KLG D + N
Sbjct: 26 YLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNT 85
Query: 330 LLKACCLAG---------NTVLAQEI------YGEV-----KHLEAKGVLKL-------- 361
L+K CL G + V+AQ YG + K E + +KL
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 145
Query: 362 ---DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+V Y+TI+ K A + +M + G+ P+ IT+++LI G + A
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGE 470
L +EM+ P NIL+ A + A L T ++ + + G
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
G + H Q N P +YNI++ C
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVN--------------------PNVYSYNIMINGLC-KCK 304
Query: 531 RVKALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
RV MN +R + + P+ +++ LID SG + AL ++ M G DVV YT
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + +++ L +A +LF +MK IQP + TY L+ + G L Q+
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 162/407 (39%), Gaps = 60/407 (14%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N + + G+ R V LR + + PN+ + TIID G+C D
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRS---TRPNVVMYNTIID--GLCKD-------------- 163
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
L+N A+DL Y M G+ D +Y L+ CL G + A
Sbjct: 164 ----------KLVN-EAYDL------YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 346 IYGE--VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ E +K++ V+ Y+ ++ + A + M G+ P +T+S+
Sbjct: 207 LLDEMILKNINP------GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ G V+ A +F M+Q G PN NI++ + + D A L R L K
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM-LHK 319
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT-TTTYNILM 522
V Y+ D + IT+ N + H+ +P TY L+
Sbjct: 320 NMVPDTVTYNSLIDGLCK-----SGRITSALNLMNEMHHRG-------QPADVVTYTSLL 367
Query: 523 KACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
A C + + AL +M+ G+ P ++T LID G ++ A ++ + + G
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
DV YT I + +A ++ +M+ PN VT+ ++R+
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 27/296 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ ++ I+ A K + A+ + + M G+ N +T + LIN + G + + +
Sbjct: 10 IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++L+ G +P++ N L++ C++ + +S VA G
Sbjct: 70 KILKLGYQPDTITLNTLMKGLCLKG-------EVKKSLHFHDKVVAQG----------FQ 112
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRF----SFKPTTTTYNILMKACCTDYYRVKA--L 535
M+H ++ N + + + R S +P YN ++ C D +A L
Sbjct: 113 MDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDL 172
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+EM G+ P+ I++T LI G + GA +L M ++P V Y I +
Sbjct: 173 YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCK 232
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+K+A +L M I+P +VTY TL+ G EVQ ++ M + G
Sbjct: 233 EGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVG---EVQNAKQIFHAMVQMG 285
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Query: 197 IVQLCVNKPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
+VQ+ VN P+V N+ I C R D N +RE K +
Sbjct: 281 MVQMGVN-PNVYSYNIMINGLCKCKRVDEAM-NLLREMLHKNMV---------------- 322
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P+ ++ID G+C G + + ++ + ++ + SL++ +L
Sbjct: 323 PDTVTYNSLID--GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M++ G+ M +Y L+ C G AQE++ +HL KG +DV+TY+ +
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF---QHLLVKGCC-IDVWTYTVM 436
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ + AL +K M G PN +T+ +I + ++A L EM+ G
Sbjct: 437 ISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+PN+Y +I+ C ++ + ++ +N+ + +NSL++ + T L
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M G AD+ +Y LL A C N A ++ ++K +G+ + ++TY+ ++
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE---RGI-QPTMYTYTALI 402
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ + +L G + T++ +I+ G+ ++A+ + +M GC
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 462
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFR 457
PN+ I++++ E + D+A +L
Sbjct: 463 PNAVTFEIIIRSLFEKDENDKAEKLLH 489
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 171/392 (43%), Gaps = 36/392 (9%)
Query: 268 ICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMAD 323
+CG + + ++ ++ S + FN+++ + ++V +M + G + D
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y+ +L C G A E+ +K K D Y+T++K + W+ A
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP----DTIAYTTVLKGLCSIEQWEHAE 392
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA- 442
++ +M+ + P+ +T++++I + GLV++A+ + E+M + GC P+ N ++
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Query: 443 CVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
C E C D A L +S+ V G + DR + E +
Sbjct: 453 CNERC-IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQ-----------LM 500
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILI 555
N +S P TT+N ++ + C ++A+ + M G PN ++ I++
Sbjct: 501 VNMMHSDC------PPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
DA +G + AL++L M +PD++ Y T I ++ ++++A L M +
Sbjct: 555 DALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612
Query: 616 PNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
P+ +TY +L R + L QDM
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDM 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 56/312 (17%)
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
LG A + +YN ++ C AG + + L + D FT++ +++
Sbjct: 124 LGASATVVTYNTMVNGYCRAGR-------IEDARRLISGMPFPPDTFTFNPLIRALCVRG 176
Query: 378 WWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCN 437
AL V +DML G +P+ +T+S L++A A QAM L +EM GCEP+ N
Sbjct: 177 RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN 236
Query: 438 ILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+L+ A D A + +++ P
Sbjct: 237 VLINAMCNEGDVDEALNI----------------------------------LSDLP--- 259
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILI 555
SH KP TY ++K+ C + V+ L EM + +P+ +++ ++
Sbjct: 260 --SH--------GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G V+ A++++ M E G PD+V Y++ + R+ A L +K Y +
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 369
Query: 616 PNLVTYITLLRA 627
P+ + Y T+L+
Sbjct: 370 PDTIAYTTVLKG 381
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 167/430 (38%), Gaps = 55/430 (12%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P F +R + + AL +D SP++ ++D Y ++
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R++ +I +N L+N N D+ L + ++ G D +Y +LK+ C
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ +E++ E+ A D T++TIV A+KV + M G
Sbjct: 279 GSERWKEVEELFAEM----ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +T+SS+++ + G V+ A+ L + GC+P++ +L+ Q++ A L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
S P
Sbjct: 395 MAEMVCSDC-----------------------------------------------PPDE 407
Query: 516 TTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T+N ++ + C R ++ +M G +P+ +++ +ID ++ A+++L
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
++ G PD+V + T +K R + A L M H P+ T+ T++ + + G
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527
Query: 634 LHEVQQCLAV 643
L + + L +
Sbjct: 528 LLQAIETLKI 537
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 140/336 (41%), Gaps = 57/336 (16%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++V + M + G D+ +YN ++ C N + + +L++ G K D+ T++T
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLC---NERCIDDAMELLSNLQSYGC-KPDIVTFNT 482
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K W+ A ++ +M+ + P+ T++++I + GL+ QA+ + M + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN NI++ A ++A + A +L T
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT---------------------------- 574
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV---GLS 545
TP+ + TYN ++ T +++ ++ +R + GLS
Sbjct: 575 --NGTPDLI-------------------TYNTVISN-ITKAGKMEEALDLLRVMVSNGLS 612
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ I++ L + A+++L +++ G+SPD Y + ++ R A
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDC 672
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
F M P+ TYI LL A + L E +Q L
Sbjct: 673 FAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
CNIL++ + A R+F + S T V +G R +E ++ I+ P
Sbjct: 101 CNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYC-RAGRIEDA-RRLISGMP- 157
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWT 552
F P T T+N L++A C RV A+ ++M G SP+ ++++
Sbjct: 158 ---------------FPPDTFTFNPLIRALCV-RGRVPDALAVFDDMLHRGCSPSVVTYS 201
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+DA + A+ +L MR G PD+V Y I + +A ++ ++ +
Sbjct: 202 ILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH 261
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+P+ VTY +L++ EV++ A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFA 291
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 184/424 (43%), Gaps = 55/424 (12%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ +++ + E++ + +N+ V SLM +L L ++ + +
Sbjct: 335 SVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 394
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKGVLKL------ 361
G+ + +Y++L++ CC +GN A E+Y ++K + +G LK
Sbjct: 395 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 454
Query: 362 -------------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++FTY+ ++ A + ++M++ G+ PN ++++ +I
Sbjct: 455 SKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGH 514
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQ 465
G ++ A +F +ML +PN +IL+ + ++A LF S ++ T
Sbjct: 515 CRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 574
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+G E +DK NF+ F P+ TYN ++
Sbjct: 575 FTFNTIINGLCKVGQMSEARDKLK-----NFLEEG----------FIPSCMTYNSIVDGF 619
Query: 526 CTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ AL EM G+SPN +++T LI+ S ++ AL+ MRE G+ DV
Sbjct: 620 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 679
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
AY+ I + + ++ A LF E+ + PN + Y +++ S + L+ ++ L
Sbjct: 680 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI---SGFRDLNNMEAALVW 736
Query: 644 YQDM 647
Y+ M
Sbjct: 737 YKKM 740
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 166/373 (44%), Gaps = 28/373 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ + +++ D+ ++++ N+ ++ L+ N D + L+++ M L +
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++N ++ C G A++ ++K+ +G + TY++IV F
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARD---KLKNFLEEGFIP-SCMTYNSIVDGFIKEGNID 626
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V +M GV+PN +T++SLIN + ++ A+ +EM + G E + + L+
Sbjct: 627 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686
Query: 441 QACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+ + A LF LS ++ G D ++NME + +
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD-LNNMEAALVWYKKMINDRI 745
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
P TY L+ + V A L EM + G+ P+ I++ +L+
Sbjct: 746 PCD--------------LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G +E A +IL+ M M+P V+ Y T I R LK+AF+L +EM +
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851
Query: 616 PNLVTYITLLRAR 628
P+ VTY L+ +
Sbjct: 852 PDDVTYDILINGK 864
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 229/554 (41%), Gaps = 53/554 (9%)
Query: 124 IREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEE 183
++EGR++ ++ E GV D + ++ Q + + + L+E ++E
Sbjct: 271 LKEGRVEEAEEYFRETKERGVK----LDAGAYSII---IQAVCKKPNSNLGLELLEEMKE 323
Query: 184 FRLPVKELDEEFRIVQLCVNKPDVNLAIRYA-----CIVPRADILFCNFVREFGKKRDLV 238
R V ++ CV + ++ A+R C P ++ + ++ + + +L
Sbjct: 324 -RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 382
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SAL ++ + PN +I+ C G+ K+ +Y ++ + +++ NSL+
Sbjct: 383 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ A + +++ GV A++ +YNI++ C G E + ++ +
Sbjct: 443 RGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKM---DEACSLLDNMVNQ 498
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G++ +V +Y+ ++ MA V DML+ + PN +T+S LI+ G E+
Sbjct: 499 GMVP-NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVAL 468
A+ LF++ML P N ++ + Q A +++ ++ +
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 617
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------------------- 509
G +GN D + +++ +PN V Y+S F
Sbjct: 618 GFIKEGNIDSALAV-YREMCEFGVSPNVV---TYTSLINGFCKSNRIDLALKTRDEMREK 673
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ T Y+ L+ C D + L E+ VGLSPN I + +I N+E A
Sbjct: 674 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 733
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
L K M D + D+ YTT I ++ RL A L+ EM I P+++T+ L+
Sbjct: 734 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 793
Query: 628 RSRYGSLHEVQQCL 641
G L ++ L
Sbjct: 794 LCNKGQLENARKIL 807
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 28/356 (7%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++Y M G+ D + +++++AC G A+E + E K +GV KLD YS I
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE---RGV-KLDAGAYSII 301
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + L++ E+M G P+ T++S+I AC G + +A+ L EEM+ G
Sbjct: 302 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 361
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
N L++ D A LF T ++ + + G GN ++ S
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 421
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT--------------TYNILMKACCT 527
+ + K + F NS + K ++ + TYNI+M C
Sbjct: 422 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK 481
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A L++ M G+ PN +S+ +I GN++ A + M + P+VV
Sbjct: 482 GGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT 541
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y+ I + ++A LF++M I P T+ T++ + G + E + L
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 14/271 (5%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+LD ++ ++ + A + A+ M+ V P + L+ A ++ +
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L+ +M+ G + +++++AC++ + + A FR +K + G D
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRE---TKER---GVKLDAGAYS 299
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-- 536
I Q++ PN K + P+ T+ ++ AC V+AL
Sbjct: 300 II------IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G N + T L+ GN++ AL + + EDG+ P+ V Y+ I+ C S
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++A L+ +MK I P++ +LLR
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRG 444
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + + F K + AL+ D ++ ++ +ID G C D ++ ++
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID--GFCKRRDMESAQDLF 702
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+L ++ N V+NS+++ + ++++ L YK M + D+ +Y L+
Sbjct: 703 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 762
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G V A ++Y E + +KG++ D+ T+ +V + + A K+ E+M +TP+
Sbjct: 763 GRLVFASDLYME---MLSKGIVP-DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPS 818
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +++LI G +++A L +EML G P+ +IL+
Sbjct: 819 VLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ L N+M G+ +H + +++ AC G VE A + + +E G+ D AY+ I+
Sbjct: 244 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 303
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ L EEMK P+ T+ +++ A G++ E L + ++M G
Sbjct: 304 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA---LRLKEEMINCG 360
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMAS 326
CG Y R ++E L V ++ +N+++ A + EVY MQ+ GVM + +
Sbjct: 275 CGSYKDCRQVFEKL----VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKIT 330
Query: 327 YNILLKACCLAGNTVLAQEIY-------------------------GEVK--HLEAKGVL 359
Y ILL AC + +EI+ G +K L ++
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ DV +++ ++ A + + AL V ++M AGV PN +T++S++NAC++ +E
Sbjct: 391 RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 420 LFEEMLQAGCEPNSQCCNILLQ------ACVEACQ-FDRAFR----LFRSWTLSKTQVAL 468
+ +++++AG ++ N L+ + +A Q FDR + + + L
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 469 GEDYDGNTDRISNMEHK-DKQSITNTPNFVPNS-------HYSSFDKRFSFKPTTTTYNI 520
G++ DR+ K DK + N N NS + ++ F T+ N
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A C + + +M N ISW +I G + ALQ+ + M+ +G
Sbjct: 571 LVSTYAKCGSFSDASIVFEKM----TKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEG 626
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD+V + + + C + L++ F M + + I P + Y ++ R G L E
Sbjct: 627 VKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEA 686
Query: 638 Q 638
+
Sbjct: 687 E 687
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 183/426 (42%), Gaps = 47/426 (11%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+DLV+ + + +H + P+ Y +I++ CG ++R +++ L T++ +
Sbjct: 37 KDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNA 96
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + ++ L++ + MQ+ G+ D + L +C G +EI H +
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI-----HFQ 151
Query: 355 A-KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
A + L DV + I+ ++A + A +V + M V ++W+ I A+ G
Sbjct: 152 AMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSV----VSWTITIGGYADCGR 207
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
E A +F++M Q G PN +L A F S K A+
Sbjct: 208 SETAFEIFQKMEQEGVVPNRITYISVLNA-------------FSSPAALKWGKAV----- 249
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT----TYNILMKACCTDY 529
RI N H+ ++ + S D R F+ +N ++
Sbjct: 250 --HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG 307
Query: 530 YRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
Y +A + N+M+ G+ PN I++ IL++AC S + +I + + G + D+
Sbjct: 308 YWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQN 367
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR--ARSRYGSLHEVQQCLAVYQ 645
I + R +K A +F++M ++ +++++ ++ A+S +G+ + L VYQ
Sbjct: 368 ALISMYSRCGSIKDARLVFDKM----VRKDVISWTAMIGGLAKSGFGA-----EALTVYQ 418
Query: 646 DMWKAG 651
+M +AG
Sbjct: 419 EMQQAG 424
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 150/366 (40%), Gaps = 46/366 (12%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
L+ Q +N + ++ + DL +V++++ + + D + N L+ G+
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++++ ++ ++E V +++ +V + + + ALK+ M G+ P+
Sbjct: 74 IEEARQVWKKLSYMERT------VHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRT 127
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-- 457
T S +++C + G +E + + +QAG + + N +L + + A +F
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKM 187
Query: 458 ------SWTLSKTQVALGEDYD-GNTDRISNMEHKDKQSITNTPNFVPNS-HYSSFDKRF 509
SWT++ +G D G ++ + K +Q VPN Y S F
Sbjct: 188 EKKSVVSWTIT-----IGGYADCGRSETAFEIFQKMEQE-----GVVPNRITYISVLNAF 237
Query: 510 SFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
S P + KA+ + + G + T L+ G+ + Q
Sbjct: 238 S-SPAALKWG-------------KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQ 283
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ E ++ D++A+ T I ++A ++ +M+ + PN +TY+ LL A
Sbjct: 284 VF----EKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACV 339
Query: 630 RYGSLH 635
+LH
Sbjct: 340 NSAALH 345
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 162/388 (41%), Gaps = 59/388 (15%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN-- 299
YD K+ P+++ T+I G+C + A+ D+ + T N+ + +L++
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIH--GLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
+ L+ V M G ++ YN+LL+A C G A ++ GE + KG
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE---MSDKGC- 481
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D+FT++T++ + AL + DML GV NT+T+++LI+A G +++A+
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALK 541
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L +ML GC + N L++A + ++A LF
Sbjct: 542 LVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF----------------------- 578
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MN 537
M KD P+ + N+L+ C AL +
Sbjct: 579 DEMVRKD------------------------LVPSNISCNLLINGLCRVGKVCNALELLR 614
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M GL+P+ +++ LI+ GN+ A + ++ +G+ PD + Y T I R+
Sbjct: 615 DMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAG 674
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ L PN VT+ L+
Sbjct: 675 MFDDAYLLLLRGVENAFIPNDVTWYILV 702
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 146/334 (43%), Gaps = 30/334 (8%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y M K G D+ ++N L+ C G L V + A G ++ TY+T++
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKG---LMGSAVDMVNDMSANGCTP-NLITYTTLL 422
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F + A V +M + G N + ++ L+ A G V +A+ + EM GC+
Sbjct: 423 DGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCK 482
Query: 431 PNSQCCNILLQACVEACQFDR---AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK-- 485
P+ N L+ C+ DR A L+R L NT + + H
Sbjct: 483 PDIFTFNTLIFG---LCKVDRKEDALALYRDMLLDGVI--------ANTVTYNTLIHAFL 531
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKP-TTTTYNILMKACCTDYYRVKAL--MNEMRTV 542
+I V D F P TYN L+KA C KAL +EM
Sbjct: 532 RGGAIQEALKLVN-------DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
L P++IS +LI+ G V AL++L+ M G++PDVV Y + I + +++A
Sbjct: 585 DLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREA 644
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
F+LF +++ IQP+ +TY TL+ R G +
Sbjct: 645 FNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDD 678
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 45/356 (12%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
SYN++L A +A ++ E + +KGV+ V+T+ ++K A +
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYE---MLSKGVIP-TVYTFGVVMKALCMVNEVDNACSL 230
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM G PN++ + +LI+A + V +A+ L EEM GC P+ N ++
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYG--- 287
Query: 446 ACQFDRAFR--------LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN---TP 494
C+ +R LFR +T + G +G R+ ++ + Q + N TP
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFT--PNDITYGVLMNGLC-RVGKVD--EAQVLLNKVPTP 342
Query: 495 NFVP-----NSHYSS--FDKRFSF----------KPTTTTYNILMKACCTDYYRVKA--L 535
N V N + S D+ +F +P T+N L+ C A +
Sbjct: 343 NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM 402
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+N+M G +PN I++T L+D +E A +L M G +++ Y ++ +
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK 462
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++ +A + EM +P++ T+ TL+ + + + LA+Y+DM G
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK---VDRKEDALALYRDMLLDG 515
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 146/375 (38%), Gaps = 60/375 (16%)
Query: 219 RADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D+ F + KK + SA+ + + +PN+ T++D G C A
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD--GFCKKNQLEEA 434
Query: 278 IY--EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
Y ++ ++ LNI +N L+ + K L++ M G D+ ++N L+
Sbjct: 435 GYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
C A +Y + + GV+ + TY+T++ F Q ALK+ DML G
Sbjct: 495 LCKVDRKEDALALY---RDMLLDGVIA-NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ IT++ LI A G E+A+ LF+EM++ P++ CN+L+ + A
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
L R +M H+ P
Sbjct: 611 ELLR-----------------------DMIHR------------------------GLAP 623
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TYN L+ C + L N+++ G+ P+ I++ LI +G + A +L
Sbjct: 624 DVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683
Query: 572 KIMREDGMSPDVVAY 586
E+ P+ V +
Sbjct: 684 LRGVENAFIPNDVTW 698
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 164/427 (38%), Gaps = 79/427 (18%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG--- 338
+S NV L+I V + +V A+ V+ M GV+ + ++ +++KA C+
Sbjct: 173 FKSYNVVLDILVSANCPSVAAN-------VFYEMLSKGVIPTVYTFGVVMKALCMVNEVD 225
Query: 339 ----------------NTVLAQE-IYGEVKHLEAKGVLKL-----------DVFTYSTIV 370
N+V+ Q I+ K LKL DV T++ ++
Sbjct: 226 NACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVI 285
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K+ + ML G TPN IT+ L+N G V++A L ++
Sbjct: 286 YGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT---- 341
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF---------RSWTLSKTQVALGEDYDGNTDRISN 481
PN IL+ V++ + D A R + + G G +
Sbjct: 342 PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD 401
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRF-------------------SFKPTTTTYNILM 522
M + D + TPN + Y++ F F+ YN+L+
Sbjct: 402 MVN-DMSANGCTPNLIT---YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLL 457
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+A C + KAL + EM G P+ ++ LI E AL + + M DG+
Sbjct: 458 RALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVI 517
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
+ V Y T I +R +++A L +M + +TY L++A + G+ ++
Sbjct: 518 ANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGA---TEKA 574
Query: 641 LAVYQDM 647
L ++ +M
Sbjct: 575 LGLFDEM 581
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 18/303 (5%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E KG+ + ++ T + ++ F + V +L G PNTIT ++L+
Sbjct: 76 KQMEVKGI-EPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCL 134
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V++++H ++++ G + N LL + + A + R S T + +
Sbjct: 135 KGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVM 194
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
Y+ D + KDK + +F YS + R F P TY L+ C
Sbjct: 195 -YNTIIDGLC----KDKL-VNEAYDF-----YSEMNARGIF-PNVITYTTLIGGFCLAGQ 242
Query: 531 RVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
A L+NEM ++PN ++ ILIDA G V+ A +L M G DVV YT+
Sbjct: 243 LTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTS 302
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ +++ L +A +LF +MK + IQPN TY L+ + G L + Q+ ++QD+
Sbjct: 303 LLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQK---LFQDLL 359
Query: 649 KAG 651
G
Sbjct: 360 VKG 362
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 147/361 (40%), Gaps = 22/361 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNI 329
Y + ++ + + + + N+ N L+N H + F+ V + KLG + +
Sbjct: 68 YSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTT 127
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K CL G + + +V A+G +++ +Y T++ + A+K +
Sbjct: 128 LMKGLCLKGEVQKSVHFHDKVV---AQG-FQMNQVSYGTLLNGLCKIGETRCAIKFLRMI 183
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ N + ++++I+ LV +A + EM G PN L+ A Q
Sbjct: 184 EDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQL 243
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
AF L L + Y D + E K K++ N + HY
Sbjct: 244 TGAFSLLNEMILKNINPNV-YTYAILIDALCK-EGKVKEA----KNLLAEMHYRG----- 292
Query: 510 SFKPT-TTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
+P TY L+ C + + AL +M+ G+ PN ++T LID G ++
Sbjct: 293 --QPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKD 350
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++ + + G DV Y I + L +A ++ +M+ PN+VT+ ++R
Sbjct: 351 AQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIR 410
Query: 627 A 627
+
Sbjct: 411 S 411
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
PN+ T+I + G + ++ ++ +N+ N+Y + L++ + +K +
Sbjct: 225 PNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNL 284
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G AD+ +Y LL C N A ++ ++K ++ + +TY+ ++
Sbjct: 285 LAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG----IQPNKYTYTALID 340
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +D+L G + T++ +I G++++A+ + +M GC P
Sbjct: 341 GLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIP 400
Query: 432 NSQCCNILLQACVEACQFDRAFRLFR 457
N I++++ + + D+A +L
Sbjct: 401 NVVTFEIIIRSLFKKDENDKAEKLLH 426
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN+Y +ID G +++ + ++ + ++ + SL++ +L
Sbjct: 259 NPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATA 318
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M++ G+ + +Y L+ C G AQ+++ + L KG +DV TY+ ++
Sbjct: 319 LFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLF---QDLLVKGCC-IDVCTYNVMI 374
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
AL +K M G PN +T+ +I + ++A L EM+ G
Sbjct: 375 GGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%)
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y +L +M G+ PN ++ ILI+ G + + +L + + G P+ + TT
Sbjct: 68 YSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTT 127
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+K ++++ +++ Q N V+Y TLL + G
Sbjct: 128 LMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 171
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+E+ + M++ + D Y+I++ C G+ A ++ E +E KG K D+ Y
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE---MEIKG-FKADIIIY 285
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T+++ F A W K+ DM+ +TP+ + +S+LI+ G + +A L +EM+Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G P++ L+ + Q D+A + + M K
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHM-----------------------LDLMVSKG 382
Query: 487 KQSITNTPNFVPNSHYSS--------FDKRFSFKPT---TTTYNILMKACCT--DYYRVK 533
T N + N + + ++ S + T TYN L++ C K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
L EM + + P+ +S+ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ ++ A+ LF + ++P++ TY ++ + GSL E
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 125/598 (20%), Positives = 258/598 (43%), Gaps = 71/598 (11%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
++ + + L +GR+ E +V+ +V + ++++L + +G+ + G++ V
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMV----EMGHKPTLITLNALVNGLCLN---GKVSDAV 197
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
++ ++ E G P E+ G K++ C+ SG+ + + L+ +EE ++ + +
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVM---CK----SGQTALAMELLRKMEERKIKLDAVKY 250
Query: 194 EFRIVQLCVNKP---DVNLAIRYACIVPRADIL-FCNFVREF---GKKRDLVSALRAYDA 246
I LC + NL +ADI+ + +R F G+ D LR D
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR--DM 308
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K+ ++ P++ +ID G ++ +++++ + ++ + + SL++ +
Sbjct: 309 IKRKIT-PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L + M G ++ ++NIL+ C A E++ + + +GV+ D
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF---RKMSLRGVVA-DTV 423
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T+++ F + ++A ++ ++M+S V P+ +++ L++ + G E+A+ +FE++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
++ E + NI++ A + D A+ LF S L G D T I
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK------GVKPDVKTYNIMIGGL 537
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K S++ P TYNIL++A D + L+ E++
Sbjct: 538 CKKGSLSEADLLFRKMEEDGH------SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 543 GLS----------------------PNHISWTILIDA--CGGSGNVEGALQILKIMREDG 578
G S P+ ++T L+ + +V A + K M+ G
Sbjct: 592 GFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMG 651
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV---TYITLLRARSRYGS 633
P+VV Y T IK + + Q + ++M QPN V T+I+ L + +GS
Sbjct: 652 YKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGS 709
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 159/396 (40%), Gaps = 40/396 (10%)
Query: 285 QNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ + N+Y + ++N L + KLG D +++ L+ CL G
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A E+ + + K L T + +V A+ + + M+ G PN +T+
Sbjct: 161 ALELVDRMVEMGHKPTL----ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
++ +G AM L +M + + ++ +I++ + D AF LF +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 463 K--------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------------- 500
T + G Y G D + + +D TP+ V S
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKL-LRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 501 ----HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
H + S P T TY L+ C + KA +++ M + G PN ++ IL
Sbjct: 336 AEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ + ++ L++ + M G+ D V Y T I+ +L+ A LF+EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+P++V+Y LL G E ++ L +++ + K+
Sbjct: 454 RPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 51/268 (19%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S + V A K + + L + + M G+ N T S +IN C + A
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EP++ + L+ C+E + A L DR+
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 170
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM 539
M HK PT T N L+ C + A L++ M
Sbjct: 171 MGHK---------------------------PTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G PN +++ ++ SG A+++L+ M E + D V Y+ I + L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRA 627
AF+LF EM+ + +++ Y TL+R
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRG 291
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 182/442 (41%), Gaps = 45/442 (10%)
Query: 246 ASKKHLSS-------PNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
ASK+HLSS P+ + + V G C + + A ++ + + + + +
Sbjct: 90 ASKRHLSSLLRAGFAPDSHAYTSF--VVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTA 147
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
L++ A ++ + V+ MQ G D Y ++ C AG T A+ + +
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAM--- 204
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
A+G + +V Y+ ++ + + ++A+ V E M G +PN T++ LI+ + +
Sbjct: 205 AEG-FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS----------WTLS-- 462
++AM LF M+ AG PN L+Q Q D A+RL +S WT S
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323
Query: 463 -----------KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+ Q+ LG + + F F
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383
Query: 512 KPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P TY+ L+ C +A++ ++M G+ P+ +++TI+ID +G+ +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
IL M G+ PDV YT ++ R++ A + M + + PNLVTY L+
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI---C 500
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
Y +L Q + ++ M G
Sbjct: 501 GYANLGLTSQAFSTFKHMVANG 522
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 163/388 (42%), Gaps = 38/388 (9%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFT 308
+ + N+ T+I+ + GD S+ L + + + S + A L
Sbjct: 67 MPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHA 126
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
++ M G + +Y LL C AG A ++ ++A G D Y+T
Sbjct: 127 CRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFA---GMQADGCAP-DPHVYAT 182
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+V A + A + D ++ G PN + +++LI+ N G +E A+ +FE M G
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRIS 480
C PN + L+ ++ + DRA LF ++ T + G+ DG D
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD--- 299
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV---KALMN 537
++ QS+ N+ VPN T ++L+ A C + RV + L+
Sbjct: 300 -CAYRLLQSMENS-GLVPNEW---------------TCSVLIDALC-KHERVGEAQLLLG 341
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+ G+ N I +T LID +G A ++++ + G PD Y++ I R K
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L +A + ++M +QP+ VTY ++
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIII 429
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 172/391 (43%), Gaps = 37/391 (9%)
Query: 267 GICGDYM--KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMA 322
G+CG M ++ +++ +++ + +V+ ++++ A + + + G
Sbjct: 151 GLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEP 210
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ YN L+ C G+ LA +++ + ++ G +V TY+ ++ F ++ A
Sbjct: 211 NVVVYNALIDGYCNVGDLELAVDVF---ERMDVNGC-SPNVRTYTELISGFCKSRKLDRA 266
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ + M+ AG+ PN +T+++LI + G ++ A L + M +G PN C++L+ A
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326
Query: 443 CVEACQFDRAFRLFRSWT---LSKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFV 497
+ + A L S + ++ DG R + + + ++ FV
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ--GFV 384
Query: 498 PNSH-YSSF------DKRFS-------------FKPTTTTYNILMKACCTDYYR--VKAL 535
P++H YSS K S +P+ TY I++ + K +
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+++M G+ P+ ++TI + + G +E A ++ M + G+ P++V Y I
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
QAFS F+ M +PN +Y LLR
Sbjct: 505 LGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 166/402 (41%), Gaps = 51/402 (12%)
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
N + ++ID G+C G + + + + L SQ + + ++SL++ +L +
Sbjct: 351 NEIVYTSLID--GLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAML 408
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE-----VKHLEAKGVLKLDVFT 365
V +M + GV +Y I++ L +E+ + + + A G+ K DVFT
Sbjct: 409 VLDDMMEKGVQPSPVTYTIIIDE--------LVREVGADGSKKILDKMIAAGI-KPDVFT 459
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ V+ + + A + M+ GV PN +T+++LI AN GL QA F+ M+
Sbjct: 460 YTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMV 519
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
GC+PN + +LL+ ++ + + ++S ++A + G + + ++
Sbjct: 520 ANGCKPNEESYTVLLRLLIK----KESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLP 575
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY-RVKALMNEMRTVGL 544
+ I N L C D K L+ EM++ L
Sbjct: 576 SEIDIYNC--------------------------FLTSLCRVDRLDEAKILLIEMQSANL 609
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+P+ +T +I C + AL + M + G P + +Y I ++ A
Sbjct: 610 TPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQ 669
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+F +M + + + L+ + G + E L+V ++
Sbjct: 670 VFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE 711
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 182/414 (43%), Gaps = 60/414 (14%)
Query: 228 VREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
V+ + D +ALR + A K+ N T+ID+ G + + +++ + +++Q
Sbjct: 187 VKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQG 246
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADM--ASYNILLKACCLAGNTVL 342
+ + +S + +F +LE + M+++G + +YN +L + +
Sbjct: 247 REITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDM 306
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWS 402
A+ ++ ++ + GV + TY+++++ F + + A+K+ +DM+ P+ +T++
Sbjct: 307 AENLFAQMIN---NGV-SCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYT 362
Query: 403 SLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
+I+A ++EQA + ++M + GCEPN N L+Q + + A L
Sbjct: 363 IVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL------- 415
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
++ ME VP P TY IL
Sbjct: 416 ----------------VTLMEQGG----------VP--------------PNIYTYTILT 435
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDA-CGGSGNVEGALQILKIMREDGM 579
C R K + NE GL PN +++ L++ C GS +E A+ ILK M ++
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE-AMDILKEMHQNDC 494
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+PD V YTT I+ V+ +L A + +EM++ N T L R +R G+
Sbjct: 495 TPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGN 548
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 36/307 (11%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M++ G ++ +YN L++ C V E E+ L +G + +++TY+ +
Sbjct: 380 VLQKMRENGCEPNIYTYNALIQGLC----AVRRPEEALELVTLMEQGGVPPNIYTYTILT 435
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+ A ++ + L+ G+ PN +T+++L+N C + L+E AM + +EM Q C
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE-AMDILKEMHQNDC 494
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD----------RI 479
P+ L+Q V+ Q A R+ + YD N D R+
Sbjct: 495 TPDHVTYTTLIQGLVQGNQLPDALRMHDEME--------NKGYDVNFDTLNILARGLARV 546
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEM 539
N HKD + D+ F++ + I + + +AL+ EM
Sbjct: 547 GN--HKDASIF----------YRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEM 594
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G SPN ++ +I G ++ A +L M E+G+ PD +Y IK R
Sbjct: 595 INKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRT 654
Query: 600 KQAFSLF 606
+ A L+
Sbjct: 655 QDADQLY 661
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 16/280 (5%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y T++ + AK + + + M + G S + + +G ++++ F M
Sbjct: 219 YFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMK 278
Query: 426 QAGCEPN--SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
+ G EP N +L + V+ + D A LF + V+ + + ++
Sbjct: 279 EMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQ--MINNGVSCNNLTYTSMIQCFFLK 336
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT 541
K + ++ + + N+ + P TY I++ A C +A ++ +MR
Sbjct: 337 EKMEDAMKLLDDMIQNN----------YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRE 386
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G PN ++ LI E AL+++ +M + G+ P++ YT + +RL +
Sbjct: 387 NGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDR 446
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
A +F E ++PN VTY TLL R L E L
Sbjct: 447 AKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDIL 486
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 170/418 (40%), Gaps = 63/418 (15%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IY 279
ILF R K + L + S K+ + Y C +++ G+C D S A +
Sbjct: 306 ILFDGLSRNGDSK----AMLSLFGKSLKNGVTIGDYTCSILLN--GLCKDGKVSIAEEVL 359
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + + ++N+L+N +L+ + M+ + D +YN L+ C A
Sbjct: 360 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 419
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
AQ++ E ++ GV V T++T++ + + V +M G+ PN
Sbjct: 420 ERITNAQDLLME---MQDNGV-NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+++ S++NA G + +A+ + ++M PN+Q N ++ A VE D+AF L
Sbjct: 476 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 535
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
K P+ T
Sbjct: 536 KM-----------------------------------------------KSNGISPSIVT 548
Query: 518 YNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+K C + + ++N + L P+ +S+ LI AC GN++ AL + + M
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
+ G+ V Y I + RL + L+++M + P+ + ++ A S+YG+
Sbjct: 609 KYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 24/337 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 155 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 211
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 212 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNV 271
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 272 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 320
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 321 ---LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P + T+ TL+ A R G L ++C V +M + G
Sbjct: 438 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENG 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 309
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 310 GLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 369
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 370 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 429
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 430 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 463
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 569
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS--GLCRAGRMGETSALLDEMASQKMVPD 300
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 301 GFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 358
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 359 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 477 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 519
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L E++
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEY-- 637
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 638 -LYQKMMQ 644
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 400
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 459
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 520 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 576
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 577 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLI 633
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 634 EMEYLYQKMMQNNVVPSNAIHNIMVEA 660
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 158/383 (41%), Gaps = 59/383 (15%)
Query: 257 YICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVY 312
Y C +++ G+C D S A + + L + + ++N+L+N +L+ +
Sbjct: 204 YTCSILLN--GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
M+ + D +YN L+ C A AQ++ E ++ GV V T++T++
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME---MQDNGV-NPTVETFNTLIDA 317
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+ + V +M G+ PN +++ S++NA G + +A+ + ++M PN
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
+Q N ++ A VE D+AF L
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKM--------------------------------- 404
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
K P+ TYN+L+K C + + ++N + L P+ +S
Sbjct: 405 --------------KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI AC GN++ AL + + M + G+ V Y I + RL + L+++M
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510
Query: 611 HYQIQPNLVTYITLLRARSRYGS 633
+ P+ + ++ A S+YG+
Sbjct: 511 QNNVVPSNAIHNIMVEAYSKYGN 533
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 24/337 (7%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D ++N ++AC AG+ E G ++ + G + F+Y+ ++ A
Sbjct: 22 GARPDTFAWNKAVQACVAAGDL---GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 78
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A++V ++M V PN IT++++I+ G +E L ++M+ G +PN+ N+
Sbjct: 79 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNV 138
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL A + L S+ V G Y D +S + D +++
Sbjct: 139 LLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS--RNGDSKAM-------- 187
Query: 499 NSHYSSFDKRFSFKPTTTTY--NILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
S F K T Y +IL+ C D + ++ + GL P + + L
Sbjct: 188 ---LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I+ +G +EGA M+ + PD + Y I +++R+ A L EM+ +
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
P + T+ TL+ A R G L ++C V +M + G
Sbjct: 305 NPTVETFNTLIDAYGRTGQL---EKCFIVLSEMQENG 338
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 37/428 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K DL + R D H PN ++ G+C G ++ A+ +++ SQ + +
Sbjct: 110 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLL--SGLCRAGRMGETSALLDEMASQKMVPD 167
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ ++ L + D K L ++ K GV + +ILL C G +A+E+
Sbjct: 168 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV-- 225
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++ L G++ V Y+T++ + + A M S + P+ IT+++LIN
Sbjct: 226 -LQSLVNAGLVPTRVI-YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQ 465
A + A L EM G P + N L+ A Q ++ F + L
Sbjct: 284 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 343
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF--SFKPTTTTYNILMK 523
V+ G I N K+ + +P + + D F P YN ++
Sbjct: 344 VSYGS--------IVNAFCKNGK--------IPEA-VAILDDMFHKDVLPNAQVYNAIID 386
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
A +A L+ +M++ G+SP+ +++ +LI + A +I+ + + P
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
D V+Y T I C + +A L + M Y I+ + TY L+ G L+E++
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY-- 504
Query: 642 AVYQDMWK 649
+YQ M +
Sbjct: 505 -LYQKMMQ 511
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + +++++ + V N +N++++ + DL+ +
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ + +YN+LL C AG + E+ A + D FTYS +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM----ASQKMVPDGFTYSILFD 176
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + L + L GVT T S L+N G V A + + ++ AG P
Sbjct: 177 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236
Query: 432 NSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISN----- 481
N L+ + + + AF F +S + + +G +RI+N
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL------ 535
ME +D PT T+N L+ A Y R L
Sbjct: 297 MEMQDN----------------------GVNPTVETFNTLIDA----YGRTGQLEKCFIV 330
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++EM+ GL PN +S+ +++A +G + A+ IL M + P+ Y I V
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 390
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
QAF L E+MK I P++VTY L++ + E ++ +
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 436
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 125 REGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEF 184
++G++ VL+ L G+ P + + L+ CQ +GE+E ++
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNT---LINGYCQ----TGELEGAFSTFGQMKSR 267
Query: 185 RLPVKELDEEFRIVQLC-----VNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVS 239
+ + I LC N D+ + ++ + P + F + +G+ L
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEK 326
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
+++ PN+ +I++ G ++ AI +D+ ++V N V+N++++
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386
Query: 300 V----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+D F L + M+ G+ + +YN+L+K C A+EI + +
Sbjct: 387 AYVEHGPNDQAFIL--VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR- 443
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
L D +Y+T++ AL +++ M G+ T+ LI+ AG +
Sbjct: 444 ---LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 500
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +L+++M+Q P++ NI+++A
Sbjct: 501 EMEYLYQKMMQNNVVPSNAIHNIMVEA 527
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSK 597
+ + G P+ +W + AC +G++ A+ +L+ M DG P+ +Y I R+
Sbjct: 18 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
R A +F+EM + PN +TY T++ + G L
Sbjct: 78 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 114
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 174/418 (41%), Gaps = 42/418 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY- 312
PN+++ ++I+ G ++ ++ + + + N + L++ K + Y
Sbjct: 363 PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYY 422
Query: 313 -KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M + G+ A + SYN ++ C G +A+ ++ K + KG LK V TY++++
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF---KEMVDKG-LKPTVATYTSLIS 478
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M G+ PNT+T+++LI + +A LF+EM++ P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N N+L++ RAF L + G D T R ++
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELL------DEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592
Query: 492 NTPNFVPNSH----------YSSFDKRF-------------------SFKPTTTTYNILM 522
F+ + H Y++ + F + +Y +L+
Sbjct: 593 EAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652
Query: 523 KACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
R+ L+ EM G+ P+++ +TILID SGN++ A + IM +G P
Sbjct: 653 SGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVP 712
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ V YT + ++ + +A LF+ M + PN +TY L ++ G++ Q
Sbjct: 713 NSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 165/412 (40%), Gaps = 61/412 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
++ + A D K SP+ Y R +I G+C G +++ DL ++ L+
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLI--AGLCSTGRVSEAKEFINDLHHKHQRLD 609
Query: 291 IYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +L+ + +K L + M G+ D+ SY +L+ + +L + +
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELL-- 667
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
+ + KG ++ D Y+ ++ F + + A + M+ G PN++T+++L+N
Sbjct: 668 --REMHGKG-MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGL 724
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
AG V +A LF+ ML PN L + + A +L
Sbjct: 725 FKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL------------- 771
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT- 527
H + F+ T TYNIL++ C
Sbjct: 772 --------------------------------HNAMLQGSFA---NTVTYNILIRGYCQI 796
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ L++ M +G+ P+ I+++ I GNV+ A+ + + M + G+ PD V +
Sbjct: 797 GKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVF 856
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
I C + L +A L +M ++P TY +L+ ++ L +VQ
Sbjct: 857 NFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 172/438 (39%), Gaps = 36/438 (8%)
Query: 222 ILFCNFVREFG----------------KKRDLVSALRAYDASKKHLSSPNMYICRTIIDV 265
+L N +R++G + R L +D P+ YI ++
Sbjct: 175 VLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKC 234
Query: 266 CGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
D+ K++ I +L+I +N +N + + +EV +++ + G+ AD
Sbjct: 235 LCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKAD 294
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ +Y L+ C + E+ E+ L G + + S +++ + A
Sbjct: 295 LVTYCTLVLGLCRIQEFEVGMEMMDEMIEL---GYVPSEA-AVSGLIEGLIKMGSIEGAF 350
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ + GV PN ++S+IN+ G +E+A LF M + G PN IL+
Sbjct: 351 ELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF 410
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+ D AF F + Y N+ + N + K + F
Sbjct: 411 GRRAKLDVAFYYFNKMIECGISATV---YSYNS--MINCQCKFGKMKMAELLF-----KE 460
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGS 561
DK KPT TY L+ C D KA L +EM G++PN +++T LI
Sbjct: 461 MVDK--GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI 518
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
+ A ++ M E + P+ V Y I+ R +AF L +EM + P+ TY
Sbjct: 519 NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578
Query: 622 ITLLRARSRYGSLHEVQQ 639
L+ G + E ++
Sbjct: 579 RPLIAGLCSTGRVSEAKE 596
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 54/372 (14%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R + + ++L+N A KF LE++ + GV D Y +++K C +
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+EI + E G L + TY+ + +K A++VK + G+ + +
Sbjct: 241 FNKAKEI---INQAEGNGC-SLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLV 296
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+ +L+ E M + +EM++ G P+ + L++ ++ + AF L
Sbjct: 297 TYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFEL---- 352
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
L+K G + N+ FV NS +S K + ++
Sbjct: 353 -LNKV---------GKLGVVPNL-------------FVYNSMINSLCKTGKLEEAELLFS 389
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ M GL+PN +++TILID G ++ A M E G+
Sbjct: 390 V------------------MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
S V +Y + I + ++K A LF+EM ++P + TY +L+ + G V +
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL---VPK 488
Query: 640 CLAVYQDMWKAG 651
+Y +M G
Sbjct: 489 AFKLYHEMTGKG 500
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 163/400 (40%), Gaps = 41/400 (10%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQKLGV 320
+CG+C ++ +++++ + N +N L+ + + T E+ M K G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +Y L+ C G A+E ++ H + LD Y+ +++ F +
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR----LDELCYTALLQGFCKEGRIK 627
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL +++M+ G+ + ++++ LI+ N L EM G +P++ IL+
Sbjct: 628 EALVARQEMVGRGLQMDLVSYAVLISGALNQN-DRILFELLREMHGKGMQPDNVIYTILI 686
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+++ +AF W + +GE Y N+ + T N + +
Sbjct: 687 DGFIKSGNLKKAFEF---W-----YIMIGEGYVPNS-----------VTYTALVNGLFKA 727
Query: 501 HYSSFDKRFSFK--------PTTTTYNILMKACCTDYYRVKAL-MNEMRTVGLSPNHISW 551
Y + + + FK P TY + + AL ++ G N +++
Sbjct: 728 GYVN-EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTY 786
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
ILI G + A ++L +M GM PD + Y+T I + + A ++E M
Sbjct: 787 NILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQ 846
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P+ V + L+ A G E+ + L + DM G
Sbjct: 847 RGLKPDRVVFNFLIHACCLNG---ELDRALQLRNDMMLRG 883
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 172/381 (45%), Gaps = 33/381 (8%)
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ S ++ + F ++M + +L L + + M + G + N+L+ C
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A ++ ++G + D FTY+T+V + A++V + ML G+ P+
Sbjct: 287 GRIDQALSF---IQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++SLI+ G +E+A+ + ++M+ C PN+ N ++ + + + D A + R
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFK 512
T SK + D I + + ++H S+ D K +
Sbjct: 403 LLT-SK---GILPDVCTFNSLIQGL-------------CLSSNHKSAMDLFEEMKGKGCR 445
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TYN+L+ + C+ +A L+ EM G + N + + LID + +E A +I
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+S D V Y T I +SKR++ A L ++M ++P+ TY +LL +
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G ++++ + Q M +G
Sbjct: 566 TG---DIKKAADIVQTMTSSG 583
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 182/428 (42%), Gaps = 36/428 (8%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC- 269
+ Y C P D+ + F K+ + AL + P+ + T+++ G+C
Sbjct: 265 VEYGC--PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN--GLCK 320
Query: 270 -GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
G + + + + + +IY +NSL++ +++ +++ M + +
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN ++ + C A EI + L +KG+L DV T++++++ + + A+ +
Sbjct: 381 YNAIISSLCKENRVDEATEI---ARLLTSKGILP-DVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
E+M G P+ T++ LI++ ++ +E+A++L +EM GC N N L+ +
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Query: 447 CQFDRAFRLFRSWTL---SKTQVALGEDYDG--NTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + A +F L S+ V DG + R+ + Q I
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME--------- 547
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+P TYN L+ C D + ++ M + G +P+ +++ LI
Sbjct: 548 --------GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G V+ A ++L+ ++ GM AY I+ + R +A LF EM P+ +
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659
Query: 620 TYITLLRA 627
TY + R
Sbjct: 660 TYKIVYRG 667
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 184/406 (45%), Gaps = 36/406 (8%)
Query: 233 KKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
++ D V+ALR ++ ASK+ P+ + I+ G G + R + E+++ +
Sbjct: 73 RQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDR 132
Query: 292 YVFNSLMNVNAHDLKFTL-----EVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLAQE 345
+F L+ V ++ KF L + K M+ + + D YN+LL A L +
Sbjct: 133 GIF--LIFVESYG-KFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVES 189
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ + + ++ DV T++ ++K A + A+ + E+M S G++P+ T+++++
Sbjct: 190 AHSSM----VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIM 245
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
G ++ A+ + E+M++ GC N+L+ + + D+A LS Q
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA--------LSFIQ 297
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSS--FDKRF--SFKPTTTTYNIL 521
A+ E + D+ + ++ N + ++ ++ D P TYN L
Sbjct: 298 EAVSEGF--RPDQFT------YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSL 349
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + ++++M + SPN +++ +I + V+ A +I +++ G+
Sbjct: 350 ISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGI 409
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
PDV + + I+ S K A LFEEMK +P+ TY L+
Sbjct: 410 LPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 45/255 (17%)
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P++ + ++ AG E + EEM +GCE FDR L
Sbjct: 95 PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCE------------------FDRGIFL 136
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI----------------TNTPNFVPN 499
+ K ++ YD + ME D+ I N V +
Sbjct: 137 IFVESYGKFEL-----YDEVVGIVKVME--DEYRIKPDTRFYNVLLNVLVDANKLKLVES 189
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA 557
+H S +R + +T+NIL+KA C + A +M EM + GLSP+ ++T ++
Sbjct: 190 AHSSMVRRRI--RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQG 247
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
GN++GAL+I + M E G V I + R+ QA S +E +P+
Sbjct: 248 YIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPD 307
Query: 618 LVTYITLLRARSRYG 632
TY TL+ + G
Sbjct: 308 QFTYNTLVNGLCKIG 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-------GD 271
R +++ + F K + + A +D + S + T+ID G+C
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID--GLCKSKRVEDAA 538
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ + I E LR T +NSL+ D+K ++ + M G D+ +Y
Sbjct: 539 QLMDQMIMEGLRPDKFT-----YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ C AG +A + ++ ++ KG++ L Y+ +++ A+++ +M
Sbjct: 594 LISGLCKAGRVQVASRL---LRSIQMKGMV-LTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Query: 390 LSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEP 431
L P+ IT+ + C G + +A+ EM++ G P
Sbjct: 650 LDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIP 692
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 35/354 (9%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L++ MQ +G + +YN+L+ +G A+E+ ++ L L++ V+TY
Sbjct: 222 LQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG----LEVSVYTYDP 277
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+++ + + + A ++ E+MLS G P +T+++++ G V A L + M+
Sbjct: 278 LIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNM 482
P+ N L+ AF LF R +L+ + V DG D M
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397
Query: 483 EHKDKQSITNTPNFVPNSH-YSSFDKRF-------------------SFKPTTTTY--NI 520
KD + I + P+ P+ +++F + F +P Y I
Sbjct: 398 RLKD-EMIKHGPD--PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRI 454
Query: 521 LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ + D + + EM G P+ I++ + ID GN++ A +++K M +G+
Sbjct: 455 VGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 514
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
PD V YT+ I + + L++A +LF EM I P++VTY L+ + + G L
Sbjct: 515 PDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 568
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 167/390 (42%), Gaps = 31/390 (7%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLG 319
G C G ++ + E++ S+ + +N++M D + L+V N
Sbjct: 281 GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN--- 337
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+M D+ SYN L+ GN A ++ E+++ L V TY+T++
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS----LAPSVVTYNTLIDGLCRLGDL 393
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+A+++K++M+ G P+ T+++ + G + A LF+EML G +P+
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
+ ++ +AF + + +A G D T + ++ V
Sbjct: 454 IVGELKLGDPSKAF------GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
Y+ P TY ++ A + +AL EM + G+ P+ +++T+LI +
Sbjct: 508 MLYNGL------VPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHS 561
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
G ++ A+ M E G+ P+V+ Y I + +++ QA++ F EM+ I PN
Sbjct: 562 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPN 621
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ G Q+ L +Y+DM
Sbjct: 622 KYTYTILINENCNLGHW---QEALRLYKDM 648
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 167/383 (43%), Gaps = 43/383 (11%)
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV-LAQ 344
++ L IYV SL+ K L YK + K G++ D+ + N +L+ N + +A+
Sbjct: 135 DLLLWIYVKKSLLE------KCLLVFYKMVSK-GLLPDVKNCNRVLRLLRDRDNNIDVAR 187
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E+Y + G+ V TY+T++ F Q AL++ M + G +PN +T++ L
Sbjct: 188 EVYNVMVEC---GICP-TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
+N +++G +EQA L ++ML+ G E + + L++ E Q + A RL LS+
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE-MLSRG 302
Query: 465 QVALGEDYDG------NTDRISNMEHKDKQSITNTPNFVPN-----------SHYSSFDK 507
V Y+ R+S + + + N +P+ + + +
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVS--DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 360
Query: 508 RF---------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
F S P+ TYN L+ C D L +EM G P+ ++T +
Sbjct: 361 AFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVR 420
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GN+ A ++ M G+ PD AY T I ++ +AF + EEM P
Sbjct: 421 GFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 480
Query: 617 NLVTYITLLRARSRYGSLHEVQQ 639
+L+TY + + G+L E +
Sbjct: 481 DLITYNVFIDGLHKLGNLKEASE 503
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 167/392 (42%), Gaps = 59/392 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+I G+ ++ ++ +LR +++ ++ +N+L++ DL + +
Sbjct: 340 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL 399
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M K G D+ ++ ++ C GN +A+E++ E+ + +G L+ D F Y I +
Sbjct: 400 KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN---RG-LQPDRFAY--ITR 453
Query: 372 VFADAKWWQ--MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + K A ++E+ML+ G P+ IT++ I+ G +++A L ++ML G
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 513
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ ++ A + A +A LF LSK
Sbjct: 514 VPDHVTYTSIIHAHLMAGHLRKARALFLE-MLSK-------------------------- 546
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN--EMRTVGLSPN 547
P+ TY +L+ + A+++ EM G+ PN
Sbjct: 547 --------------------GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 586
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I++ LI+ ++ A M+ G+SP+ YT I ++A L++
Sbjct: 587 VITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYK 646
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+M +IQP+ T+ +LL+ ++ LH V+
Sbjct: 647 DMLDREIQPDSCTHRSLLKHLNKDYKLHVVRH 678
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 218 PRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSPN--MYICRTIIDVCGICGDYMK 274
P D+ F FVR F K +L A +D P+ YI R + ++ GD K
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK--LGDPSK 465
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILL 331
+ + E++ ++ ++ +N ++ H +LK E+ K M G++ D +Y ++
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFID-GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +AG+ A+ ++ E + +KG+ V TY+ ++ +A ++A+ +M
Sbjct: 525 HAHLMAGHLRKARALFLE---MLSKGIFP-SVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
GV PN IT+++LIN ++QA + F EM G PN IL+ +
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640
Query: 452 AFRLFR 457
A RL++
Sbjct: 641 ALRLYK 646
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 513 PTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYN ++ + C +AL + +M+ +G SPN +++ +L++ SG +E A ++
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ M G+ V Y I+ ++++A L EEM P +VTY T++ +
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319
Query: 631 YGSLHEVQQCLAV 643
+G + + ++ L V
Sbjct: 320 WGRVSDARKLLDV 332
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFTLEV 311
P+ +II + G K+RA++ ++ S+ + ++ + L++ A LK +
Sbjct: 515 PDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 574
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M + GV ++ +YN L+ C A + E ++AKG+ + +TY+ ++
Sbjct: 575 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE---MQAKGI-SPNKYTYTILIN 630
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ WQ AL++ +DML + P++ T SL+ + HL E ++ AG
Sbjct: 631 ENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHL-ENVIAAG 686
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
N++ A ++ +M E G+ P VV Y T + + +++A L +M+ PN VTY
Sbjct: 182 NIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ S G E++Q + QDM + G
Sbjct: 242 VLVNGLSHSG---EMEQAKELIQDMLRLG 267
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 33/334 (9%)
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
YN++++ T A+ ++ E++ K D TY+ ++ A W+ A+ +
Sbjct: 146 YNMMIRLHARHNLTDQARGLFFEMQEWRCKP----DSETYNALINAHGRAGQWRWAMNIM 201
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
EDML + P+ T+++LINAC ++G +A+ + ++M + G P+ NI+L A
Sbjct: 202 EDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTG 261
Query: 447 CQFDRAFRLF--------RSWTLSKT-----QVALGEDYDGNTDRISNMEHKDKQSITNT 493
Q+ +A F R T ++ V LG+ + D ++M K + +
Sbjct: 262 AQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQ-CEKAIDIFNSMREKRAECRPDI 320
Query: 494 PNFVPNSHYSSFDKR-------FS------FKPTTTTYNILMKACCTDYYRVKAL--MNE 538
F H S + FS PT +YN L+ A +AL +
Sbjct: 321 VTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKK 380
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
++ GL P+ +S+T L+ + G S + A ++ +M++ + P+VV++ I +
Sbjct: 381 IKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGL 440
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
L A + EM+ I PN+VT TLL A R G
Sbjct: 441 LADAVKVLREMEQDGIHPNIVTICTLLAACGRCG 474
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 145/343 (42%), Gaps = 54/343 (15%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ MQ+ D +YN L+ A AG A I ++ + + TY+ ++
Sbjct: 165 LFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDM----LREAIPPSRSTYNNLI 220
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ W+ ALKV + M GV P+ +T + +++A +A+ FE M
Sbjct: 221 NACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIR 280
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P++ NI++ V+ Q ++A +F S
Sbjct: 281 PDTTTRNIVIYCLVKLGQCEKAIDIFNSMR------------------------------ 310
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNH 548
+KR +P T+ I + + KA+ + M GL+P
Sbjct: 311 ---------------EKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTI 355
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+S+ LI A G E AL + K ++ G+ PDVV+YT+ + RSK+ K+A +F
Sbjct: 356 VSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNM 415
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
MK +++PN+V++ L+ A YGS + + V ++M + G
Sbjct: 416 MKKAKLKPNVVSFNALIDA---YGSNGLLADAVKVLREMEQDG 455
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 172/409 (42%), Gaps = 59/409 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K D+ +++R K+ P++ +II + + G +A++ + ++ +T I
Sbjct: 301 KAIDIFNSMR----EKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIV 356
Query: 293 VFNSLMNVNA-HDL-KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+ A H + + L V+K ++ G++ D+ SY LL + + A+E++ +
Sbjct: 357 SYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMM 416
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K K LK +V +++ ++ + A+KV +M G+ PN +T +L+ AC
Sbjct: 417 K----KAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGR 472
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G + G + N+ CN + + + ++++A L+ S + K +VA
Sbjct: 473 CGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNS--MRKMKVA--- 527
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TD 528
P + TY +L+ CC +
Sbjct: 528 ------------------------------------------PNSVTYTVLISGCCKMSK 545
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
Y + +M + ++ + +I A G + A I +M+ G PD++ +T
Sbjct: 546 YGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTA 605
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ + +A L +EM+ Y IQ + + L+RA ++ G+ +V
Sbjct: 606 MLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQV 654
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 171/398 (42%), Gaps = 36/398 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 211 PSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSY 270
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M+ + D + NI++ G A +I+ ++ E + + D+ T+++I+
Sbjct: 271 FELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMR--EKRAECRPDIVTFTSIIH 328
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+++ + + V ML+ G+TP +++++LI A A G+ E+A+ +F+++ +G P
Sbjct: 329 LYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLP 388
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV------ALGEDYDGN---TDRISNM 482
+ LL + + Q +A +F +K + AL + Y N D + +
Sbjct: 389 DVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVL 448
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMR 540
++ I P T L+ AC C + A+++ +
Sbjct: 449 REMEQDGI---------------------HPNIVTICTLLAACGRCGQKVNIDAVLSAAK 487
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+ N ++ I + G E A+ + MR+ ++P+ V YT I C + +
Sbjct: 488 MRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYG 547
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+A F +M +I +++ A S+ G + E +
Sbjct: 548 KAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAE 585
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 157/379 (41%), Gaps = 39/379 (10%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILL 331
K+R ++ ++ + N+ FN+L++ + L ++V + M++ G+ ++ + LL
Sbjct: 408 KAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLL 467
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC G V + K +G+ KL+ ++ + + + ++ A+ + M
Sbjct: 468 AACGRCGQKVNIDAVLSAAK---MRGI-KLNTVACNSAIGSYMNVGEYEKAVALYNSMRK 523
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V PN++T++ LI+ C +A+ F +M++ + C+ ++ A + Q
Sbjct: 524 MKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITE 583
Query: 452 AFRLFRSWTLSK------TQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
A +F ++ T A+ GE + D I ME D Q T +
Sbjct: 584 AESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDT----IACS 639
Query: 500 SHYSSFDKRFSFK--------------PTTTTYNILMKACCTDYYRVKALMNEMRTVGLS 545
+ +F+KR + P + M + C+ + ++N M+ + S
Sbjct: 640 ALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPS 699
Query: 546 PNHISWTI---LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ +S + L+ G SG +E +++ + G + Y+ +K + ++
Sbjct: 700 FSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRKY 759
Query: 603 FSLFEEMKHYQIQPNLVTY 621
+ E M+ IQP++ Y
Sbjct: 760 IEVLEWMEDAGIQPSIGMY 778
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T ++ +I A L +QA LF EM + C+P+S+ N L+ A A Q+ A +
Sbjct: 143 TDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIME 202
Query: 458 SWTLSKTQVALGEDYD------GNTDRISNMEHKDKQSITN-------TPNFVPNSH--- 501
L + Y+ G++ KQ N T N V +++
Sbjct: 203 D-MLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTG 261
Query: 502 --------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRT--VGLSPNHI 549
Y K + +P TTT NI++ KA + N MR P+ +
Sbjct: 262 AQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIV 321
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T +I SG VE + M +G++P +V+Y I ++A S+F+++
Sbjct: 322 TFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKI 381
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K + P++V+Y +LL S YG + ++ ++ M KA
Sbjct: 382 KASGLLPDVVSYTSLL---SSYGRSKQPKKAREMFNMMKKA 419
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 168/389 (43%), Gaps = 47/389 (12%)
Query: 294 FNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
FNS++NV ++ KF L V+ K G ++ +YN+++KA C G A + +
Sbjct: 139 FNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTF 197
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E+ DVFTYST++ + A+ + ++M + G PN +T++ LI+A
Sbjct: 198 REMPLKNCNP----DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDA 253
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---T 464
+ G + +A L + M GC PN N L+ + D+A L SK
Sbjct: 254 LSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 313
Query: 465 QVALGEDYDGNTDR---------ISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------ 509
QV G +G + + +ME + +++ ++ +S S K
Sbjct: 314 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA----NEYIYSSLISGLFKEGKSENAV 369
Query: 510 ---------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
KP Y + C D +A ++ EM + G PN +++ L+
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+ + A+ + K M M +VV + + S RL++A +++ M ++P++
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDM 647
V Y ++++ GS V + L ++ +M
Sbjct: 490 VAYSSMIKGLCDVGS---VDKGLKLFYEM 515
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 27/402 (6%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L + A+ K PN+ II G ++ + ++ +N +++ +++LMN
Sbjct: 160 LHVFGANSKGFQ-PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218
Query: 301 NAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ + V+ MQ G + + ++N+L+ A G+ A ++ V ++ KG
Sbjct: 219 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL---VDNMFLKGC 275
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ +V TY+T++ AL + E M+S+ PN +T+ ++IN E +
Sbjct: 276 VPNEV-TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV 334
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGN 475
H+ M + G + N + L+ + + + A RL++ + V G DG
Sbjct: 335 HILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGL 394
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
E +D + F+PN+ YSS K F FK + IL
Sbjct: 395 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF-FKKGDSQKAIL------------- 440
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM + + N + ++L++ SG + AL + M +G+ PDVVAY++ IK
Sbjct: 441 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 500
Query: 595 RSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSL 634
+ + LF EM + + +P++VTY L A R +L
Sbjct: 501 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNL 542
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + + PN+ + ID G+C D A I +++ S+ N + ++S
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFID--GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
LM D + + V+K M + ++ ++LL C +G A ++ H+
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW---THML 481
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGVTPNTITWSSLINACANAG 412
+G LK DV YS+++K D LK+ +M P+ +T++ L NA
Sbjct: 482 GEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 540
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +A+ L ML GC+P+S CNI L+ E + RLF
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF 584
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 26/260 (10%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQA---GCEPNSQCCNILLQACVEACQFDRAFRLF 456
+++S++N G A + + A G +PN N++++A + Q DRA F
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197
Query: 457 RSWTLSKTQVALGEDYDGNTDRISN---MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R L N D + M K+ + F+ + + P
Sbjct: 198 REMPLKNC----------NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE-----GCLP 242
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N+L+ A D R L++ M G PN +++ LI G ++ AL +L
Sbjct: 243 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 302
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M P+ V Y T I V+ +R + + M+ + N Y +L+ +
Sbjct: 303 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 362
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + + + ++++M + G
Sbjct: 363 G---KSENAVRLWKEMAEKG 379
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 184/424 (43%), Gaps = 55/424 (12%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
++I C G+ +++ + E++ + +N+ V SLM +L L ++ + +
Sbjct: 295 SVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 354
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVK-----------HLEAKGVLKL------ 361
G+ + +Y++L++ CC +GN A E+Y ++K + +G LK
Sbjct: 355 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 414
Query: 362 -------------DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++FTY+ ++ A + ++M++ G+ PN ++++ +I
Sbjct: 415 SKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGH 474
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQ 465
G ++ A +F +ML +PN +IL+ + ++A LF S ++ T
Sbjct: 475 CRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 534
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
+G E +DK NF+ F P+ TYN ++
Sbjct: 535 FTFNTIINGLCKVGQMSEARDKLK-----NFLEEG----------FIPSCMTYNSIVDGF 579
Query: 526 CTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ AL EM G+SPN +++T LI+ S ++ AL+ MRE G+ DV
Sbjct: 580 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 639
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
AY+ I + + ++ A LF E+ + PN + Y +++ S + L+ ++ L
Sbjct: 640 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI---SGFRDLNNMEAALVW 696
Query: 644 YQDM 647
Y+ M
Sbjct: 697 YKKM 700
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 166/373 (44%), Gaps = 28/373 (7%)
Query: 265 VCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGV 320
+ G C G+ + +++ D+ ++++ N+ ++ L+ N D + L+++ M L +
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
++N ++ C G A++ ++K+ +G + TY++IV F
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARD---KLKNFLEEGFIP-SCMTYNSIVDGFIKEGNID 586
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
AL V +M GV+PN +T++SLIN + ++ A+ +EM + G E + + L+
Sbjct: 587 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646
Query: 441 QACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV 497
+ + A LF LS ++ G D ++NME + +
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD-LNNMEAALVWYKKMINDRI 705
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILI 555
P TY L+ + V A L EM + G+ P+ I++ +L+
Sbjct: 706 PCD--------------LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ G +E A +IL+ M M+P V+ Y T I R LK+AF+L +EM +
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811
Query: 616 PNLVTYITLLRAR 628
P+ VTY L+ +
Sbjct: 812 PDDVTYDILINGK 824
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 201/481 (41%), Gaps = 45/481 (9%)
Query: 197 IVQLCVNKPDVNLAIRYA-----CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHL 251
++ CV + ++ A+R C P ++ + ++ + + +L SAL ++ +
Sbjct: 296 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 355
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN +I+ C G+ K+ +Y ++ + +++ NSL+ + A +
Sbjct: 356 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 415
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ GV A++ +YNI++ C G E + ++ +G++ +V +Y+ +
Sbjct: 416 KLFDEAVDCGV-ANIFTYNIMMSWLCKGGKM---DEACSLLDNMVNQGMVP-NVVSYNDM 470
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ MA V DML+ + PN +T+S LI+ G E+A+ LF++ML
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
P N ++ + Q A +++ ++ + G +GN D
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRF-------------------SFKPTTTTYNILM 522
+ +++ +PN V Y+S F + T Y+ L+
Sbjct: 591 V-YREMCEFGVSPNVVT---YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C D + L E+ VGLSPN I + +I N+E AL K M D +
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 706
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
D+ YTT I ++ RL A L+ EM I P+++T+ L+ G L ++
Sbjct: 707 CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 766
Query: 641 L 641
L
Sbjct: 767 L 767
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 28/356 (7%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++Y M G+ D + +++++AC G A+E + E K +GV KLD YS I
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE---RGV-KLDAGAYSII 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + L++ E+M G P+ T++S+I AC G + +A+ L EEM+ G
Sbjct: 262 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISN 481
N L++ D A LF T ++ + + G GN ++ S
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 381
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT--------------TYNILMKACCT 527
+ + K + F NS + K ++ + TYNI+M C
Sbjct: 382 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK 441
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+A L++ M G+ PN +S+ +I GN++ A + M + P+VV
Sbjct: 442 GGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT 501
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y+ I + ++A LF++M I P T+ T++ + G + E + L
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 14/271 (5%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+LD ++ ++ + A + A+ M+ V P + L+ A ++ +
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
L+ +M+ G + +++++AC++ + + A FR +K + G D
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRE---TKER---GVKLDAGAYS 259
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM-- 536
I Q++ PN K + P+ T+ ++ AC V+AL
Sbjct: 260 II------IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM G N + T L+ GN++ AL + + EDG+ P+ V Y+ I+ C S
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++A L+ +MK I P++ +LLR
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRG 404
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIY 279
+ + + + F K + AL+ D ++ ++ +ID G C D ++ ++
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID--GFCKRRDMESAQDLF 662
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+L ++ N V+NS+++ + ++++ L YK M + D+ +Y L+
Sbjct: 663 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 722
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G V A ++Y E + +KG++ D+ T+ +V + + A K+ E+M +TP+
Sbjct: 723 GRLVFASDLYME---MLSKGIVP-DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPS 778
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ +++LI G +++A L +EML G P+ +IL+
Sbjct: 779 VLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 33/235 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P+ +I+D G+ + A+Y ++ V+ N+ + SL+N ++ + L+
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV--------------------- 350
M++ G+ D+ +Y+ L+ C + AQ+++ E+
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 686
Query: 351 -KHLEAKGV---------LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
++EA V + D+ TY+T++ A + +MLS G+ P+ IT
Sbjct: 687 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT 746
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ L+N N G +E A + EEM + P+ N L+ AF L
Sbjct: 747 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTL 801
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P NIL+ A ++ L N+M G+ +H + +++ AC G VE A +
Sbjct: 183 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEY 242
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ +E G+ D AY+ I+ + L EEMK P+ T+ +++ A
Sbjct: 243 FRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA 302
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G++ E L + ++M G
Sbjct: 303 QGNMVEA---LRLKEEMINCG 320
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 192/443 (43%), Gaps = 31/443 (6%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
+ +C R+ N + E G+ +++ S L D+ + P++ T++ I
Sbjct: 66 KTSCRTVRSRTKLMNIMIEKGRPQEVQSIL---DSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ +I + + + FN+++N + +++ ++ + M++ G +++N
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K +AG +Q++ + E ++ ++ TY+ +V+ + + K A V M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDEN---VRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+++G+ P+ +T++++ A A G QA + EM + +PN + C I++ + +
Sbjct: 240 VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKI 299
Query: 450 DRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
A + + L V G D + D+ + +
Sbjct: 300 KEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAV------DRDGVNEVLTLM--------- 344
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F KP T++ +M A + + + + ++M + P+ ++IL +G
Sbjct: 345 EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEP 404
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A +IL M + G P+VV +TT I + R++ A +FE+M I PNL T+ TL
Sbjct: 405 EKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETL 464
Query: 625 LRARSRYGSLHEVQQCLAVYQDM 647
+ YG + + V Q M
Sbjct: 465 IWG---YGEARQPWKSEEVLQIM 484
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 168/389 (43%), Gaps = 47/389 (12%)
Query: 294 FNSLMNV------NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
FNS++NV ++ KF L V+ K G ++ +YN+++KA C G A + +
Sbjct: 163 FNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTF 221
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
E+ DVFTYST++ + A+ + ++M + G PN +T++ LI+A
Sbjct: 222 REMPLKNCNP----DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDA 277
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---T 464
+ G + +A L + M GC PN N L+ + D+A L SK
Sbjct: 278 LSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 337
Query: 465 QVALGEDYDGNTDR---------ISNMEHKDKQSITNTPNFVPNSHYSSFDKRF------ 509
QV G +G + + +ME + +++ ++ +S S K
Sbjct: 338 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA----NEYIYSSLISGLFKEGKSENAV 393
Query: 510 ---------SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDAC 558
KP Y + C D +A ++ EM + G PN +++ L+
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G+ + A+ + K M M +VV + + S RL++A +++ M ++P++
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDM 647
V Y ++++ GS V + L ++ +M
Sbjct: 514 VAYSSMIKGLCDVGS---VDKGLKLFYEM 539
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 27/402 (6%)
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
L + A+ K PN+ II G ++ + ++ +N +++ +++LMN
Sbjct: 184 LHVFGANSKGFQ-PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242
Query: 301 NAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ + V+ MQ G + + ++N+L+ A G+ A ++ V ++ KG
Sbjct: 243 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL---VDNMFLKGC 299
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+ +V TY+T++ AL + E M+S+ PN +T+ ++IN E +
Sbjct: 300 VPNEV-TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV 358
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ---VALGEDYDGN 475
H+ M + G + N + L+ + + + A RL++ + V G DG
Sbjct: 359 HILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGL 418
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
E +D + F+PN+ YSS K F FK + IL
Sbjct: 419 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF-FKKGDSQKAIL------------- 464
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM + + N + ++L++ SG + AL + M +G+ PDVVAY++ IK
Sbjct: 465 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 524
Query: 595 RSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRARSRYGSL 634
+ + LF EM + + +P++VTY L A R +L
Sbjct: 525 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNL 566
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNS 296
+A+R + + PN+ + ID G+C D A I +++ S+ N + ++S
Sbjct: 391 NAVRLWKEMAEKGCKPNVVVYGAFID--GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448
Query: 297 LMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
LM D + + V+K M + ++ ++LL C +G A ++ H+
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW---THML 505
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML--SAGVTPNTITWSSLINACANAG 412
+G LK DV YS+++K D LK+ +M P+ +T++ L NA
Sbjct: 506 GEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 564
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+ +A+ L ML GC+P+S CNI L+ E + RLF
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 26/260 (10%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQA---GCEPNSQCCNILLQACVEACQFDRAFRLF 456
+++S++N G A + + A G +PN N++++A + Q DRA F
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221
Query: 457 RSWTLSKTQVALGEDYDGNTDRISN---MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
R L + N D + M K+ + F+ + + P
Sbjct: 222 REMPLK----------NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE-----GCLP 266
Query: 514 TTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T+N+L+ A D R L++ M G PN +++ LI G ++ AL +L
Sbjct: 267 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 326
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M P+ V Y T I V+ +R + + M+ + N Y +L+ +
Sbjct: 327 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 386
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G + + + ++++M + G
Sbjct: 387 G---KSENAVRLWKEMAEKG 403
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 143/358 (39%), Gaps = 34/358 (9%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD---LKFTLEVYKNMQKL--GVMADMASYNILLKACC 335
+LRS + L + N ++ V E + M + GV D S+ L+ CC
Sbjct: 133 ELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCC 192
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E + + A+G LD T + +V+ F ++ + M G
Sbjct: 193 REGRF---EEADALLAAMWAQGFC-LDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTP 248
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN + +S+ I+ G V+QA H+ EEM+ G +PN L+ + +RAFRL
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQSITNTPNFVPNSHYSSFDKRF 509
F S + Y N + M E K ++ V
Sbjct: 309 FLKLVKSSS-------YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ---------- 351
Query: 510 SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P T TY L+ C + R LMN+M+ G PN ++ +I G ++ A
Sbjct: 352 GLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEA 411
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++L++ G+ D V YT I + + A LF++M P++ TY T++
Sbjct: 412 YKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTII 469
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 165/405 (40%), Gaps = 44/405 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P+ R ++ C G + ++ A+ + +Q L+ ++ +F ++
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M ++G +M +Y+ + C G ++ + ++ + KG LK +V+T+++++
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERG---YVKQAFHVLEEMVGKG-LKPNVYTHTSLID 294
Query: 372 VFADAKWWQMALKVKEDML-SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
W + A ++ ++ S+ PN T++ +I G + +A L M++ G
Sbjct: 295 GLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTL--------------------SKTQVAL-- 468
PN+ L+ + FDRAF L L K Q A
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV 414
Query: 469 -------GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
G D T I EH + IT + + ++ S P TY +
Sbjct: 415 LRMATSQGLHLDKVTYTILITEHCKQGHITCALDL-----FKQMAEK-SCHPDIHTYTTI 468
Query: 522 MKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C ++ L ++ ++GL P ++T +I G + AL++ + M + G
Sbjct: 469 IAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGC 528
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
PD + Y I + RL++A +LFE M + P VT +TL
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 121/258 (46%), Gaps = 23/258 (8%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+PN T+I G C G + ++ + ++ + NIY +N+++ K E
Sbjct: 354 APNTNTYTTLIH--GHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ-E 410
Query: 311 VYKNMQ---KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
YK ++ G+ D +Y IL+ C G+ A +++ ++ A+ D+ TY+
Sbjct: 411 AYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM----AEKSCHPDIHTYT 466
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
TI+ ++ + + + ++ + LS G+ P T++S+I G + A+ +FE M+Q
Sbjct: 467 TIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQH 526
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK-------TQVALGEDY---DGNTD 477
GC P+S L+ + + + + A LF + L K T+V L +Y D T
Sbjct: 527 GCLPDSITYGALISSLCKESRLEEARALFETM-LDKHLVPCDVTRVTLAYEYCRRDKITI 585
Query: 478 RISNMEHKDKQSITNTPN 495
+S ++ DK+ +T +
Sbjct: 586 AVSFLDRLDKRQQAHTAD 603
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 172/406 (42%), Gaps = 26/406 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL D + P++ T+++ + G ++ + + + N + ++N
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V + +E+ + M++ + D Y+I++ C G+ A ++ E +E KG
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE---MEMKG 293
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ ++ TY+ ++ F +A W K+ DM+ + PN +T+S LI++ G + +A
Sbjct: 294 ITT-NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
L +EM+ G P++ L+ + D+A ++ V+ G D + T
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV------DLMVSKGCDPNIRTF 406
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT---TTTYNILMKACCT--DYYRV 532
I + I + ++ S + T TYN L++ C
Sbjct: 407 NILINGYCKANRIDDGLELF---------RKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K L EM + + PN +++ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A+ LF + ++P + TY ++ + G L E +
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 174/427 (40%), Gaps = 64/427 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
F + R L A A K PN T+I+ G+C G ++ + + +
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN--GLCLEGRVSEALELVDRMVEMGHK 190
Query: 289 LNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ N+L+N ++ + + L + K M + G + +Y +L C +G T LA E
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDK-MVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++ +E + + KLD YS I+ A + +M G+T N IT++ LI
Sbjct: 250 L---LRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
NAG + L +M++ PN ++L+ + V+ + A L +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE------- 358
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
M H+ P T TY L+
Sbjct: 359 ----------------MIHR------------------------GIAPDTITYTSLIDGF 378
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + KA +++ M + G PN ++ ILI+ + ++ L++ + M G+ D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y T I+ +L A LF+EM ++ PN+VTY LL G E ++ L +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG---ESEKALEI 495
Query: 644 YQDMWKA 650
++ + K+
Sbjct: 496 FEKIEKS 502
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 21/294 (7%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E KG+ +++T S ++ F + +A ++ G PNTIT+S+LIN
Sbjct: 112 KQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVA 467
G V +A+ L + M++ G +P+ N L+ + + A L + V
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G + N+ K Q+ + ++R + K Y+I++ C
Sbjct: 231 YGP--------VLNVMCKSGQTA------LAMELLRKMEER-NIKLDAVKYSIIIDGLCK 275
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
A L NEM G++ N I++ ILI +G + ++L+ M + ++P+VV
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ I V+ +L++A L +EM H I P+ +TY +L+ + L + Q
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 162/384 (42%), Gaps = 63/384 (16%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN G+ D LR D K+ ++ PN+ +ID G ++ +++++
Sbjct: 308 FCNA----GRWDDGAKLLR--DMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + + SL++ + L ++ M G ++ ++NIL+ C A
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
E++ + + +GV+ D TY+T+++ F + +A ++ ++M+S V PN +T+
Sbjct: 421 DGLELF---RKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
L++ + G E+A+ +FE++ ++ E + NI++ A + D A+ LF S L
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
KP TYNI+
Sbjct: 537 K-----------------------------------------------GVKPGVKTYNIM 549
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + L +M G +P+ ++ ILI A G G+ ++++++ ++ G
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAF 603
S D I + + RLK++F
Sbjct: 610 SVDASTIKMVIDM-LSDGRLKKSF 632
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +V + AD A+ + DM+ + P I +S L +A A + + L ++M
Sbjct: 62 SGLVDIKADD-----AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM---- 482
G N +I++ F R +L +++ + LG Y+ NT S +
Sbjct: 117 KGIAHNLYTLSIMINC------FCRCRKLCLAFSAMGKIIKLG--YEPNTITFSTLINGL 168
Query: 483 --EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
E + +++ V H KP T N L+ C +A L+++
Sbjct: 169 CLEGRVSEALELVDRMVEMGH----------KPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN +++ +++ SG A+++L+ M E + D V Y+ I +
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
L AF+LF EM+ I N++TY L+ G + + L +DM K
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL---RDMIK 326
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 35/300 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V +S + A K + + L + + M G+ N T S +IN + A
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EPN+ + L+ C+E + A L DR+
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 186
Query: 482 MEHK-DKQSITNTPNFVPNSHYSS-----FDK--RFSFKPTTTTYNILMKACCTDYYRVK 533
M HK D +I N + S + DK + +P TY ++ C
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+ +M + + + ++I+ID G+++ A + M G++ +++ Y I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R L +M +I PN+VT+ L+ + + G L E ++ ++++M G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE---LHKEMIHRG 363
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 57/323 (17%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G ++ +YN L+ + A A ++ ++ + + D TY T++ + A
Sbjct: 405 MVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQ----EAGCQPDRVTYCTLIDIHA 460
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +AL + + M A ++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 461 KAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLV 520
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A L+R D Q+
Sbjct: 521 TYNIMIALQAKARNYPTALELYR----------------------------DMQNA---- 548
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 549 ---------------GFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYG 593
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G GNVE + + + M G+ P+V + + +R RL A++L + M
Sbjct: 594 LLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRL 653
Query: 613 QIQPNLVTYITLL----RARSRY 631
+QP+L TY LL ARS +
Sbjct: 654 GLQPSLQTYTLLLSCCTEARSSF 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L AL Y ++ SP+ + II+ G G + ++ +
Sbjct: 450 VTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCE 509
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q N+ +N + + A + LE+Y++MQ G D +Y+I+++ G+
Sbjct: 510 MVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGH 569
Query: 340 TVLAQEIYGEVKH---LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A+ I+ E+K + + V L V + + V +W+Q ML+AG+ P
Sbjct: 570 LEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQA-------MLNAGLCP 622
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
N T +SL++A + A +L + ML+ G +P+ Q +LL C EA FD F
Sbjct: 623 NVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDMGF 680
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ + K D TY+T+V + A+ + K+ +M+ G PN +T++ LI++ A
Sbjct: 369 LKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRAN 428
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A+ +F+ M +AGC+P+ L+ +A D A +++
Sbjct: 429 YLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQ--------------- 473
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPN-----SHYSSFDKRF------SFKPTTTTYNIL 521
M+ T T + + N H +S K F P TYNI+
Sbjct: 474 --------KMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIM 525
Query: 522 --MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++A +Y L +M+ G P+ ++++I+++ G G++E A I M+
Sbjct: 526 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 585
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD Y + + + +++++ ++ M + + PN+ T +LL A R +H +
Sbjct: 586 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLR---VHRLSD 642
Query: 640 CLAVYQDMWKAG 651
+ Q M + G
Sbjct: 643 AYNLLQSMLRLG 654
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ +D ++ P+ T+ID+ G + +Y+
Sbjct: 415 VTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQK 474
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +++ + + ++ ++N A L +++ M G + ++ +YNI++ A N
Sbjct: 475 MQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARN 534
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+Y ++++ + D TYS +++V + A + +M P+
Sbjct: 535 YPTALELYRDMQN----AGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEP 590
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ G VE++ ++ ML AG PN CN LL A F R RL ++
Sbjct: 591 VYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSA------FLRVHRLSDAY 644
Query: 460 TLSKTQVALG 469
L ++ + LG
Sbjct: 645 NLLQSMLRLG 654
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 161/392 (41%), Gaps = 43/392 (10%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T++ + G + + ++ N+ +N L++ A+ L + V+ MQ+
Sbjct: 384 TMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEA 443
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D +Y L+ AG +A +Y +++ L D FTYS I+ A
Sbjct: 444 GCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH----LSPDTFTYSVIINCLGKAGH 499
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ +M+ G PN +T++ +I A A A+ L+ +M AG +P+ +I
Sbjct: 500 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 559
Query: 439 LLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSIT 491
+++ + A +F ++W + L D G ++ N+E + Q++
Sbjct: 560 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWG---KVGNVEKSWEWYQAML 616
Query: 492 NT---PNFVP--NSHYSSFDK---------------RFSFKPTTTTYNILMKACCTDYYR 531
N PN VP NS S+F + R +P+ TY +L+ +CCT+
Sbjct: 617 NAGLCPN-VPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL-SCCTEARS 674
Query: 532 V--KALMNEMRTVGLSPNHISWTILIDACGGSG-NVEGAL-QILKIMREDGMSPDVVAYT 587
E+ V P H+ + + + A G G NV + + L +M +
Sbjct: 675 SFDMGFCGELMAVTGHPAHM-FLLSMPAAGPDGQNVRDHVSKFLDLMHSEDRESKRGLVD 733
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+ +S ++A S++E + P+ V
Sbjct: 734 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 765
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 65/379 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+Y+++R V N+Y +N L+ + + ++ M + G D S+ ++ C
Sbjct: 91 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 150
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF-ADAKWWQMALKVKEDMLSAGV 394
G A+ E ++A +Y+ +V + + W++ V +M+ G+
Sbjct: 151 KLGRVEEARGFLAETVPVQA---------SYNAVVHALCGEFRMWEV-FSVVNEMVQRGL 200
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T++++++A A + A + M+ GC PN
Sbjct: 201 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN---------------------- 238
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
L+ T + G DG +M H + P+
Sbjct: 239 -----VLTFTALVKGFFEDGKVHDALSMWHWMVDE--------------------GWAPS 273
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +YN+L++ C D N M+ L PN +++ L+D +G+++GA+ I
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M+ G P+VV YT I V + QA SL ++M PN VT+ TL+ R
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI---GRLC 390
Query: 633 SLHEVQQCLAVYQDMWKAG 651
V + L V+ M + G
Sbjct: 391 DCGRVGRALNVFHGMRRNG 409
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 32/384 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
PN+ TI+D + + AI + S T N+ F +L+ D K L +
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G SYN+L++ C G+ A + + +K + L + TYST+V
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK----RNALLPNATTYSTLVD 317
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++A A+ + +M S+G PN + ++++I+ + +QA L ++ML C P
Sbjct: 318 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 377
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN-MEHKDKQSI 490
N+ N L+ + + RA +F + DR N + H
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH---------PNDRTYNELLHGL---- 424
Query: 491 TNTPNFVPNSHYSSFDKRF-----SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
F +H +F F+ + TYN ++ C R A L+ M G
Sbjct: 425 -----FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 479
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++ +I A G V A +L M +VVAYT I +L A
Sbjct: 480 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 539
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
+M + I PN T+ L+RA
Sbjct: 540 VYLLKMLYEGICPNEATWNVLVRA 563
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM-- 273
++P A + V F DL A+ ++ K PN+ + +IDV +C M
Sbjct: 305 LLPNATT-YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV--LCKKMMFD 361
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ ++ + + N N FN+L+ + + L V+ M++ G + +YN LL
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
GN ++ + V + G +L + TY+T++ + A+ + M+
Sbjct: 422 HGLFREGNH---KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 477
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
G+ P+ T++++I+A G V A L +M C N IL+
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 526
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 513 PTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P YN L+ A + V + + MR G+ PN ++ +LI A + V+ A ++
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA---------------------------- 602
L M G PD V++ T + + R+++A
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186
Query: 603 --FSLFEEMKHYQIQPNLVTYITLLRA 627
FS+ EM +QPN+VTY T++ A
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDA 213
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 167/371 (45%), Gaps = 27/371 (7%)
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ LN Y + L+ ++ + D VY M G D+ +YN+LL A LA +
Sbjct: 230 IKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDA--LAKD 287
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L + Y K ++ K D +TY+ ++++ + +L + E+ML+ G TPN I
Sbjct: 288 EQLDRS-YKVFKDMKLKHC-NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLI 345
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++++I A + +G+V++A+ LF M++ C PN +I+L V Q R +
Sbjct: 346 AYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-- 403
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP--TTTT 517
+ Y +S + H + + F +SF
Sbjct: 404 --VSNKFINKSIYAYLVRTLSKLGHSSEA-------------HRLFCNMWSFHDGGDRDA 448
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y ++++ C V+A L++++ G+S + + + ++ G V + + M+
Sbjct: 449 YISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMK 508
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+DG PD+ Y I R ++K+A +FEE++ +P++++Y +L+ + G +
Sbjct: 509 QDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVD 568
Query: 636 EVQQCLAVYQD 646
E QD
Sbjct: 569 EAHMRFLEMQD 579
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 177/417 (42%), Gaps = 48/417 (11%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N Y R ++ D ++ +Y ++ S+ L+I+ +N L++ A D L + +V+
Sbjct: 238 NAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVF 297
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K+M+ D +Y I+++ + G A+E + + KG ++ Y+T+++
Sbjct: 298 KDMKLKHCNPDEYTYTIMIR---MTGKMGRAEESLALFEEMLTKGCTP-NLIAYNTMIQA 353
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-P 431
+ + A+ + +M+ PN T+S ++N G + + +E+L+ +
Sbjct: 354 LSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGR----LDEVLEVSNKFI 409
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYD------------GNTDR 478
N L++ + A RLF W+ G D D G T
Sbjct: 410 NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHD-----GGDRDAYISMLESLCRGGKTVE 464
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMK 523
+ K + +T + N+ S+ K P TYNIL+
Sbjct: 465 AIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILIS 524
Query: 524 ACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ +VK + E+ + P+ IS+ LI+ G +G+V+ A M++ G++
Sbjct: 525 SL-GRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLN 583
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PDVV Y+T I+ ++ +++ A SLF+ M PN+VTY LL R G E
Sbjct: 584 PDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAET 640
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+YE ++ +I+ +N L++ +K +EV++ ++ D+ SYN L+ C
Sbjct: 503 LYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLIN--C 560
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
L N + E + ++ KG L DV TYST+++ F +MA + + M++ G
Sbjct: 561 LGKNGDV-DEAHMRFLEMQDKG-LNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCC 618
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL--LQACVEACQFDRAF 453
PN +T++ L++ AG + + L+ ++ + G P+S IL LQ+ +R F
Sbjct: 619 PNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGS-----NRKF 673
Query: 454 RLFR-----SWTLS 462
R+ R W +S
Sbjct: 674 RVRRQNPITGWVVS 687
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 195/437 (44%), Gaps = 40/437 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYD-ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
FC V+ G+ AL Y+ + +H SPN + TI+ V G + I+
Sbjct: 131 FCFVVKWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-- 187
Query: 283 RSQNVTLN-IYVFNSLMNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGN 339
R++ + N + V+N++M V A +FT E+ M+ G D+ S+N L+ A +G
Sbjct: 188 RAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGT 247
Query: 340 TV--LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
V LA E+ EV+ + ++ D+ TY+T++ + + A+KV DM++ P+
Sbjct: 248 MVTNLAIELLNEVR----RSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 303
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T++++I+ G+ +A LF+++ G P++ N LL A D+ +
Sbjct: 304 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 363
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF----DKRFSFK- 512
++ G+D + + I +M K Q H +F D + S +
Sbjct: 364 D----MVKMGFGKD-EMTYNTIIHMYGKRGQ------------HDLAFQLYSDMKLSGRS 406
Query: 513 PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P TY +L+ + +A +M+EM + P +++ LI +G A +
Sbjct: 407 PDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEET 466
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
M G+ PD +AY+ + + +R +A L++EM + +P+ Y +LR +
Sbjct: 467 FDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGK 526
Query: 631 YGSLHEVQQCLAVYQDM 647
+V + V +DM
Sbjct: 527 ENREEDVHK---VVKDM 540
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 211 IRYACIVPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC 269
+R + I P DI+ N + ++ +L A++ Y+ H P+++ +I V G C
Sbjct: 260 VRRSGIQP--DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRC 317
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASY 327
G ++ +++DL S+ + +NSL+ A + + E+ ++M K+G D +Y
Sbjct: 318 GMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTY 377
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N ++ G LA ++Y ++K L + D TY+ ++ A + A +V
Sbjct: 378 NTIIHMYGKRGQHDLAFQLYSDMK-LSGRSP---DAVTYTVLIDSLGKANMIKEAAEVMS 433
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+ML+A V P T+S+LI A AG +A F+ ML++G +P+ +++L +
Sbjct: 434 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 493
Query: 448 QFDRAFRLFRSWTL 461
+ +A +L++ L
Sbjct: 494 ESGKAMKLYQEMVL 507
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 512 KPTTTTYNILMKACCTDYYRVK----ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+P ++N L+ A V L+NE+R G+ P+ I++ LI AC N+E A
Sbjct: 229 EPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEA 288
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++ M PD+ Y I V R ++A LF++++ P+ VTY +LL A
Sbjct: 289 VKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA 348
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+R G++ +V++ + +DM K G
Sbjct: 349 FAREGNVDKVKE---ICEDMVKMG 369
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 34/312 (10%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K++ KG K V + + +++ + AK ++ A V M ++G P+ +T+ ++ +
Sbjct: 165 LKYMNKKG-YKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFV 223
Query: 410 NAGLVEQAMHLFEEML---QAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
++A +FE++L +A +P+ + ++++ +A + +A +LF R L
Sbjct: 224 EGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPL 283
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
S ++ + +SN+ Y +R + KP +Y++L
Sbjct: 284 STVTFNSLMSFETDYKEVSNI-------------------YDQM-QRTALKPDVVSYSLL 323
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+KA +AL EM G+ P S+ ILIDA SG VE A + K MR +
Sbjct: 324 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRV 383
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD+ +YTT + V + + A F +K ++PN+V Y TL++ Y L+ V++
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKG---YSKLNNVER 440
Query: 640 CLAVYQDMWKAG 651
+ VY+ M G
Sbjct: 441 VMRVYERMRMQG 452
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 126/334 (37%), Gaps = 89/334 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +I + GDY ++R ++ + + + L+ FNSLM+ D K +Y
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFET-DYKEVSNIYD 306
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ + D+ SY++L+KA YG+ + E
Sbjct: 307 QMQRTALKPDVVSYSLLIKA-------------YGKARREEE------------------ 335
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL V E+ML AGV P +++ LI+A A +GLVE+A +F+ M + EP+
Sbjct: 336 --------ALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDL 387
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
++ A V A D A + FR RI
Sbjct: 388 CSYTTMVLAYVNASDMDGAEKFFR--------------------RI-------------- 413
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
K KP Y LMK + RV + MR G+ PN +
Sbjct: 414 -------------KEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T ++D G + + A+ K M G D A
Sbjct: 461 TTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKA 494
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 157/398 (39%), Gaps = 61/398 (15%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+++ F V +GK D A R K P++ +++ G Y K+ A++
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 280 EDLRSQN-----VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+++ VT I + + + + + E N ++ D +++++
Sbjct: 201 RRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMY 260
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG+ A++++ + + +G+ L T+++++ D ++ + + M +
Sbjct: 261 KKAGDYAQARKLFAQ---MSERGI-PLSTVTFNSLMSFETD---YKEVSNIYDQMQRTAL 313
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +++S LI A A E+A+ +FEEML AG P + NIL+ A + + A
Sbjct: 314 KPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHT 373
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F++ +R +P
Sbjct: 374 VFKAM-----------------------------------------------RRHRVEPD 386
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y ++ A +D + ++ GL PN + + L+ NVE +++ +
Sbjct: 387 LCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
MR G+ P+ YTT + V R+ A F+EM+
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEME 484
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL---------RSQNVTLNIYVF 294
YD ++ P++ +I G ++ A++E++ +S N+ ++ +
Sbjct: 305 YDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAI 364
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ L+ AH V+K M++ V D+ SY ++ A A + A++ + +K
Sbjct: 365 SGLVE-EAHT------VFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIK--- 414
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
+ LK +V Y T++K ++ + ++V E M GV PN ++++++
Sbjct: 415 -EDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDF 473
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILL 440
A+ F+EM G + + NILL
Sbjct: 474 GNAVIWFKEMEARGYPADKKAKNILL 499
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +L+ A G G+ A ++LK M + G P V++ T ++ R+K+ ++A ++F
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ +P+ VTY +L++ + + ++ A+++D+
Sbjct: 201 RRMQTSGPEPSAVTYQIILKS---FVEGDKYKEAEAIFEDL 238
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ R + ++ M G P+ IS T L++A G + A + + M+ G P V Y
Sbjct: 157 DFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQ 216
Query: 588 TAIKVCVRSKRLKQAFSLFEEM---KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+K V + K+A ++FE++ K +P+ + ++ + G + ++ A
Sbjct: 217 IILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFA 274
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 15/335 (4%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L+ + +LG + SY ++L+ A N +A+ +K + G +KL+ +++
Sbjct: 103 LQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR-RSNGTVKLEDRFFNS 161
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA- 427
+++ + A +Q +++V M S GV+P+ +T++SL+ G A +F+EML
Sbjct: 162 LIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTY 221
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
G P++ NIL++ + D FR F+ + K + D ++ D
Sbjct: 222 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKC----------DPDLVTYNTLVDG 271
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
N N K + P TY L++ C + +AL+ EM + GL
Sbjct: 272 LCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLK 331
Query: 546 PNHISWTILIDACGGSGNVEGALQILK-IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN I++ LI ++ QI + + G PD T + + L A
Sbjct: 332 PNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALE 391
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+FE+M ++P+ TY L+R + G+ +Q
Sbjct: 392 VFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQ 426
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 182/458 (39%), Gaps = 86/458 (18%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D F + +R +GK +++ +++ K SP++ +++ + G ++++++
Sbjct: 156 DRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFD 215
Query: 281 D-LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + VT + Y FN L+ + + +K M + D+ +YN L+ C A
Sbjct: 216 EMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRA 275
Query: 338 GNTVLAQEIY-GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G +A + G VK L DV TY+T+V+ + AL V E+M+S G+ P
Sbjct: 276 GKVNIAHNVVNGMVKK---STNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKP 332
Query: 397 NTITWSSLI------------------------------------NACANAGLVEQAMHL 420
N IT+++LI NA NAG + A+ +
Sbjct: 333 NEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEV 392
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
FE+M+ P+S ++L++ + F+RA +LF LS+ ++ L + DG T
Sbjct: 393 FEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDE--LSEKEILLRD--DGCT---- 444
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
P Y + + C + KA + +
Sbjct: 445 --------------------------------PLVAAYKSMFEFLCRNGKTAKAERVFRQ 472
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G + + +S+ ILI G E ++L +M PD+ Y + I ++
Sbjct: 473 LMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGE 531
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
A+ E+M P T+ ++L G HE
Sbjct: 532 PLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHE 569
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 175/420 (41%), Gaps = 20/420 (4%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
D +F +R + + R L A A+ + + ++ C +I G + +Y+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAG 338
++ V +N+Y N ++N D K +Q+ GV D+ +YN L+ A G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
L +E + + + KG V+TY+T++ ++ A +V +ML +G++P++
Sbjct: 285 ---LMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+ SL+ G V + +F +M P+ C + ++ + D+A F S
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+ L D T I K S+ + D TY
Sbjct: 401 V----KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD--------VVTY 448
Query: 519 NILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N ++ C +A L NEM L P+ + TILID GN++ A+++ + M+E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ DVV Y T + + + A ++ +M +I P ++Y L+ A G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 64/386 (16%)
Query: 272 YMKSRAIYED------LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
Y+++R + E LRS+ T++I N+L+ V ++ VY+ + + GV +
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ + NI++ A C G +++ + ++ KGV D+ TY+T++ ++ + A
Sbjct: 235 VYTLNIMVNALCKDGKM---EKVGTFLSQVQEKGVYP-DIVTYNTLISAYSSKGLMEEAF 290
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
++ M G +P T++++IN G E+A +F EML++G P+S LL
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL--- 347
Query: 444 VEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS 503
+EAC+ K V E S+M +D P+ V +S
Sbjct: 348 MEACK--------------KGDVVETEKV------FSDMRSRDV-----VPDLVC---FS 379
Query: 504 SFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGS 561
S F T + N+ KALM N ++ GL P+++ +TILI
Sbjct: 380 SMMSLF-----TRSGNL-----------DKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G + A+ + M + G + DVV Y T + + K L +A LF EM + P+ T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDM 647
L+ + G+L Q + ++Q M
Sbjct: 484 TILIDGHCKLGNL---QNAMELFQKM 506
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 172/395 (43%), Gaps = 57/395 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLE 310
SP+ R+++ GD +++ ++ D+RS++V ++ F+S+M++ + +L L
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++++ G++ D Y IL++ C G +A + E+ +G +DV TY+TI+
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ---QGC-AMDVVTYNTIL 452
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K A K+ +M + P++ T + LI+ G ++ AM LF++M +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ N LL + D A + W ++M K+
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEI---W--------------------ADMVSKE---- 545
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
PT +Y+IL+ A C+ + +A + +EM + + P
Sbjct: 546 --------------------ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+ +I SGN L+ M +G PD ++Y T I VR + + +AF L ++
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 609 MKHYQ--IQPNLVTYITLLRARSRYGSLHEVQQCL 641
M+ Q + P++ TY ++L R + E + L
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 169/417 (40%), Gaps = 66/417 (15%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R +VP + F + + F + +L AL +++ K+ P+ I +I G C
Sbjct: 366 MRSRDVVPDL-VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCR 422
Query: 271 DYMKSRA--IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
M S A + ++ Q +++ +N++++ L +++ M + + D +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
IL+ C GN A E++ ++K ++LDV TY+T++ F A ++
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKR----IRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
DM+S + P I++S L+NA + G + +A +++EM+ +P CN +++ +
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
G DG S +
Sbjct: 599 ----------------------GNASDGE---------------------------SFLE 609
Query: 507 KRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEM--RTVGLSPNHISWTILIDACGG 560
K S F P +YN L+ + KA L+ +M GL P+ ++ ++
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
++ A +L+ M E G++PD YT I V L +AF + +EM P+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 219 RADILFCN-FVREFGKKRDLVSA--LRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
R D++ N + FGK D+ +A + A SK+ L +P Y I V +C G
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS----ILVNALCSKGHLA 567
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYN 328
++ +++++ S+N+ + + NS++ + NA D + LE M G + D SYN
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE---KMISEGFVPDCISYN 624
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEA-KGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
L+ N A +G VK +E +G L DVFTY++I+ F + A V
Sbjct: 625 TLIYGFVREENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
M+ GV P+ T++ +IN + + +A + +EMLQ G P+ +
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 55/409 (13%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLG-VMADMASYNIL 330
K+ AI+ ++++ +NS++ + H+ ++ E+Y M G D +Y+ L
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSAL 236
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ A C G A ++ E+K + K+ Y+ ++ +F AL + E+M
Sbjct: 237 ISAFCKLGRRDSATQLLNEMKENGMQPTTKI----YTMLITLFFKLDDVHGALSLFEEMR 292
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
P+ T++ LI AG +++A H F EM + GC P++ N ++ +A + D
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A +LF+ T + NT + E K + S P++ K
Sbjct: 353 DAMKLFQEMG---TLRCIPSVVTYNTIIKALFESKSRAS--EVPSWFERM------KESG 401
Query: 511 FKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDA----------- 557
P++ TY+IL+ C KA+M EM G P ++ LIDA
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 558 ---------CGGS---------------GNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
CG S G ++ A+ + M + G +PDV AY +
Sbjct: 462 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R+ L +A S M+ + P++ +Y +L ++ G H + L+
Sbjct: 522 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 50/433 (11%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FC R RD SA + + K++ P I +I + D + +++E++R
Sbjct: 240 FCKLGR-----RD--SATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292
Query: 284 SQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
Q +++ + L+ A + + MQ+ G D N ++ AG
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 342 LAQEIYGEVKHLEAKGVLKL--DVFTYSTIVKVFADAK--------WWQMALKVKEDMLS 391
A +++ E+ G L+ V TY+TI+K ++K W+ E M
Sbjct: 353 DAMKLFQEM------GTLRCIPSVVTYNTIIKALFESKSRASEVPSWF-------ERMKE 399
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
+G++P++ T+S LI+ +E+AM L EEM + G P L+ A +A ++D
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RF 509
A LF+ L E+ ++ R+ + K + + + FD+ +
Sbjct: 460 ACELFQE---------LKENCGSSSARVYAVMIKHLGKAGRLDDAI-----NMFDEMNKL 505
Query: 510 SFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
P YN LM +AL M M+ G P+ S+ I+++ +G A
Sbjct: 506 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 565
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+++L M++ + PDVV+Y T + + ++A L EEM + +L+TY ++L A
Sbjct: 566 MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEA 625
Query: 628 RSRYGSLHEVQQC 640
+ + Q C
Sbjct: 626 IGKVDHEYTGQGC 638
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 18/271 (6%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAG---VTPNTITWSSLINACANAGLVEQAM 418
D TY +++ + + K+ ++M+ VTP + S ++ NA +V +A+
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTEL--SEVVRMLGNAKMVSKAI 179
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F ++ C+P +Q N ++ + Q+ + L+ + Y
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISA 239
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALM 536
+ +D S T N + K +PTT Y +L+ D + +L
Sbjct: 240 FCKLGRRD--SATQLLNEM---------KENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMR P+ ++T LI G +G ++ A M+ +G PD V I ++
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
RL A LF+EM + P++VTY T+++A
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKA 379
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 173/400 (43%), Gaps = 59/400 (14%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A++ Y+ + N++I T+ID+ + G++ ++ +Y +L+S
Sbjct: 539 LTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSS----------- 587
Query: 297 LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
GV+ D ++I+++ AG+ +E ++ ++ +
Sbjct: 588 ----------------------GVVLDRIGFSIVVRMYVKAGSL---EEACSVLEIMDEQ 622
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ DV+ + +++++ + + +G+ N ++ +IN CA A +++
Sbjct: 623 KDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDE 682
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
FEEM++ G PN+ N+LL +A F + LF L+K G
Sbjct: 683 LSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF---LLAKRH--------GVV 731
Query: 477 DRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D IS + + TN + + N + F + YN L+ A D
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS------VSLEAYNTLLDAYGKDKQME 785
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ ++++ M+ P+H ++ I+I+ G G ++ +LK ++E G+ PD+ +Y T I
Sbjct: 786 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
K +++A L +EM+ I P+ VTY L+ A R
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 172/432 (39%), Gaps = 98/432 (22%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN----MQKLGVMADMASY 327
Y K+ + + ++ V L + N L+ +NA+ + +E+ ++ M+ G ++ +Y
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLE--NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAY 352
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEA-KGV--------LKLDVFTYSTIVKVFADAKW 378
N L+ YG++ +EA +G+ L+ D +Y ++++ + A
Sbjct: 353 NTLITG-------------YGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
++ A +++ G PN+ +LIN A G + A+ E+M GC+ +S I
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSS-ILGI 458
Query: 439 LLQA-----------CVEACQFDRAFRL----FRSWTLSKTQVALGEDYDG--------N 475
+LQA CV F RL F S ++ + + +D G +
Sbjct: 459 ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRD 518
Query: 476 TDRISNMEH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+ S++ H K+ +T+ +H D+ + T+T +I ++
Sbjct: 519 SAFESHLYHLLICSCKESGQLTDAVKIY--NHKMESDEEINLHITSTMIDIY--TVMGEF 574
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED-GMSPDVV---- 584
+ L +++ G+ + I ++I++ +G++E A +L+IM E + PDV
Sbjct: 575 SEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRD 634
Query: 585 -------------------------------AYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
Y I C R+ L + FEEM Y
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 694
Query: 614 IQPNLVTYITLL 625
PN VT+ LL
Sbjct: 695 FTPNTVTFNVLL 706
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 118/295 (40%), Gaps = 40/295 (13%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANA 411
+ G L + YS I++V + W A +KE + ++++I AC
Sbjct: 164 MRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKK 223
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILL-----QACVEACQFD----RAFRL-----FR 457
G V+ A F ML+ G PN +L+ VE +F R F + +
Sbjct: 224 GNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYS 283
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
S T++ L YD + + ++ +D+ + V + YS K
Sbjct: 284 SMITIYTRLRL---YD-KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK---------- 329
Query: 518 YNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
M+ ++++ M G SPN I++ LI G +E A + +
Sbjct: 330 ----MELA-------ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G+ PD +Y + I+ R+ ++A ++E+K +PN TL+ +++YG
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYG 433
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 107/296 (36%), Gaps = 58/296 (19%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACAN 410
+L++ GV+ LD +S +V+++ A + A V E M + P+ + ++
Sbjct: 583 NLKSSGVV-LDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQK 641
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
L ++ HL+ + ++G N + N ++ C A D F
Sbjct: 642 CDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI---------- 691
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
R+ F P T T+N+L+ Y
Sbjct: 692 -------------------------------------RYGFTPNTVTFNVLLDV----YG 710
Query: 531 RVKALMNEMRTVGLSPNH-----ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ K L+ H IS+ +I A G + + +K M+ DG S + A
Sbjct: 711 KAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEA 770
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
Y T + + K++++ S+ + MK P+ TY ++ G + EV L
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVL 826
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E+ + DL+ L + +K N T+I C G+ + + + V
Sbjct: 189 EWDRAEDLIKELCGFHEFQKSYQVFN-----TVIYACTKKGNVKLASKWFHMMLEFGVRP 243
Query: 290 NIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ LM N N + +F + +M+K G++ + A +++ T+ +
Sbjct: 244 NVATIGMLMGLYQKNWNVEEAEFA---FSHMRKFGIVCESAYSSMI---------TIYTR 291
Query: 345 -EIYG---EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+Y EV L + ++L + + ++ ++ ++A + M +AG +PN I
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS-- 458
+++LI +E A LF + G EP+ +++ A ++ A ++
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 459 -----------WTLSKTQVALGEDYDGNTDRISNM 482
+TL Q G D DG I +M
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYG-DRDGAIKTIEDM 445
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 175/403 (43%), Gaps = 26/403 (6%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMN- 299
A D H +PN+ T+ID G+C M RA +++ + + V N + + L++
Sbjct: 191 ADDGDGSH--TPNVVTYTTVID--GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246
Query: 300 -VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
++ K +++ + M G+ D Y +LL C G A+ I+ L KG+
Sbjct: 247 YLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDS---LIRKGI 303
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
K V Y ++ +A + M+ GV+P+ ++ + NA A ++++AM
Sbjct: 304 -KPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAM 362
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
H+F++M Q P L+ A + + D A F + D +
Sbjct: 363 HIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMI----NEGVTPDIFVFSSL 418
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LM 536
+ + DK F D+ + +NILM C + ++A L+
Sbjct: 419 VYGLCTVDKWEKAEKLFF------EVLDQ--GIRLNAAFFNILMCNLCREGRVMEAQRLI 470
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ M V + P+ IS+ L+D +G ++ A ++L +M G+ PD Y T + ++
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+R+ A+SLF EM + P +VTY T+L + G E ++
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 56/318 (17%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHL---EAKGVLKLDVFTYSTI 369
+ M + G ++ SYNILLK C N A+E E+ H+ + G +V TY+T+
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLC---NEKRAEEAL-ELMHMMADDGDGSHTPNVVTYTTV 208
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A+ A V + M+ GV PN T++ LI+ + G ++ + + +EM G
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL 268
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+P+ +LL + + A +F S
Sbjct: 269 QPDCVIYAVLLDYLCKNGRCTEARNIFDSLI----------------------------- 299
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
R KP T Y IL+ T+ + + ++ M G+SP+
Sbjct: 300 ------------------RKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPD 341
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
H + I+ +A ++ A+ I MR+ +SP VV Y I + R+ A F
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401
Query: 608 EMKHYQIQPNLVTYITLL 625
+M + + P++ + +L+
Sbjct: 402 QMINEGVTPDIFVFSSLV 419
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 156/396 (39%), Gaps = 65/396 (16%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
+ KK + A+ +D ++ SP + +ID G + + + ++ VT +
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPD 411
Query: 291 IYVFNSLMNVNAHDLKFTLEVYKNMQKL-------GVMADMASYNILLKACCLAGNTVLA 343
I+VF+SL+ + L T++ ++ +KL G+ + A +NIL+ C G + A
Sbjct: 412 IFVFSSLV----YGL-CTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
Q + + ++ + DV +Y+T+V A K+ + M+S G+ P+ T+++
Sbjct: 467 QRLIDLMLRVDVRP----DVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
L++ A ++ A LF EML G P N +L + +F A L+
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELY------- 575
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
N + N K TY I++
Sbjct: 576 ------------------------------LNMINNRR----------KCDIYTYTIILN 595
Query: 524 ACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + + +A + + + L + + I+I A G E A+ + + G+ P
Sbjct: 596 GLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVP 655
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
DV Y + ++ L++ LF M+ PN
Sbjct: 656 DVETYRLIAENLIKEGSLEELDELFSAMEENGTAPN 691
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 111/279 (39%), Gaps = 44/279 (15%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVT-PNTITWSSLINACANAGLVEQAMH-LFE 422
TY+ ++ F + +L G + NT+ + L+ +A V++A L
Sbjct: 94 TYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLR 153
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M + GC N NILL+ + + A L + +D DG
Sbjct: 154 RMPEFGCTLNVISYNILLKGLCNEKRAEEALELMH---------MMADDGDG-------- 196
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV 542
++TPN V TT + L KA D R K + M
Sbjct: 197 --------SHTPNVVT---------------YTTVIDGLCKAQMVD--RAKGVFQHMIDK 231
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ PN+ ++T LI +G + +Q+L+ M G+ PD V Y + ++ R +A
Sbjct: 232 GVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEA 291
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++F+ + I+P++ Y LL + G+L E+ L
Sbjct: 292 RNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 160/418 (38%), Gaps = 29/418 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNI 291
GK +++V L+ H P+ I ++D G ++R I++ L + + ++
Sbjct: 251 GKWKEVVQMLQEMST---HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHV 307
Query: 292 YVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGE 349
++ L++ A + L M + GV D +NI+ A A I+ +
Sbjct: 308 TIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDK 367
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
++ + L V Y ++ A+ M++ GVTP+ +SSL+
Sbjct: 368 MR----QQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423
Query: 410 NAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
E+A LF E+L G N+ NIL+ C R R+ + L + L
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILM------CNLCREGRVMEAQRL----IDLM 473
Query: 470 EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT-- 527
D D IS D +T + + KP TYN L+ C
Sbjct: 474 LRVDVRPDVISYNTLVDGHCLTGRID--EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKAR 531
Query: 528 ---DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
D Y +L EM GL+P +++ ++ G A ++ M + D+
Sbjct: 532 RIDDAY---SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIY 588
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
YT + R+ + +AF +F+ + +Q ++ T ++ A + G + A
Sbjct: 589 TYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFA 646
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANA---GLVEQAMHLFEEMLQ---AGCEPNSQC 435
ALK+ ++ML+ + T++ L+ + A E + LF M++ P+S
Sbjct: 35 ALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCT 94
Query: 436 CNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
IL+ + F F W+L+ T V G+ G D E D +
Sbjct: 95 YTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNT-VIFGQLLKGLCDAKRVDEATDIL-L 152
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG---LS 545
P F +YNIL+K C + +A LM+ M G +
Sbjct: 153 RRMPEF-------------GCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++T +ID + V+ A + + M + G+ P+ YT I + + + K+ +
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+EM + +QP+ V Y LL + G E +
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARN 293
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+IL CN RE G+ ++ A R D + P++ T++D + G ++ + +
Sbjct: 451 NILMCNLCRE-GR---VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ S + + + +N+L++ A + +++ M G+ + +YN +L G
Sbjct: 507 VMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A+E+Y + K D++TY+ I+ + A K+ + + S + +
Sbjct: 567 RFCEAKELYLNM----INNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T + +I A G E AM LF + G P+ + ++ + ++ + LF
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELF 680
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKAC 334
+++ ++ + +T + +N++++ +F E+Y NM D+ +Y I+L
Sbjct: 538 SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGL 597
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C E + + L +K L+LD+FT + ++ + A+ + + + G+
Sbjct: 598 C---RNNFVDEAFKMFQSLCSKD-LQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
P+ T+ + G +E+ LF M + G PNS+ N L++ + RA
Sbjct: 654 VPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 172/406 (42%), Gaps = 26/406 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
AL D + P++ T+++ + G ++ + + + N + ++N
Sbjct: 275 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 334
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V + +E+ + M++ + D Y+I++ C G+ A ++ E +E KG
Sbjct: 335 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE---MEMKG 391
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQA 417
+ ++ TY+ ++ F +A W K+ DM+ + PN +T+S LI++ G + +A
Sbjct: 392 ITT-NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450
Query: 418 MHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTD 477
L +EM+ G P++ L+ + D+A ++ V+ G D + T
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV------DLMVSKGCDPNIRTF 504
Query: 478 RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---PTTTTYNILMKACCT--DYYRV 532
I + I + ++ S + T TYN L++ C
Sbjct: 505 NILINGYCKANRIDDGLELF---------RKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
K L EM + + PN +++ IL+D +G E AL+I + + + M D+ Y I
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++ A+ LF + ++P + TY ++ + G L E +
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 174/427 (40%), Gaps = 64/427 (14%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVT 288
F + R L A A K PN T+I+ G+C G ++ + + +
Sbjct: 231 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN--GLCLEGRVSEALELVDRMVEMGHK 288
Query: 289 LNIYVFNSLMN---VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
++ N+L+N ++ + + L + K M + G + +Y +L C +G T LA E
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDK-MVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
+ ++ +E + + KLD YS I+ A + +M G+T N IT++ LI
Sbjct: 348 L---LRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
NAG + L +M++ PN ++L+ + V+ + A L +
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE------- 456
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
M H+ P T TY L+
Sbjct: 457 ----------------MIHR------------------------GIAPDTITYTSLIDGF 476
Query: 526 CTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + + KA +++ M + G PN ++ ILI+ + ++ L++ + M G+ D
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
V Y T I+ +L A LF+EM ++ PN+VTY LL G E ++ L +
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG---ESEKALEI 593
Query: 644 YQDMWKA 650
++ + K+
Sbjct: 594 FEKIEKS 600
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 21/294 (7%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E KG+ +++T S ++ F + +A ++ G PNTIT+S+LIN
Sbjct: 210 KQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 268
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVA 467
G V +A+ L + M++ G +P+ N L+ + + A L + V
Sbjct: 269 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 328
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
G + N+ K Q+ + ++R + K Y+I++ C
Sbjct: 329 YGP--------VLNVMCKSGQTA------LAMELLRKMEER-NIKLDAVKYSIIIDGLCK 373
Query: 528 DYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
A L NEM G++ N I++ ILI +G + ++L+ M + ++P+VV
Sbjct: 374 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ I V+ +L++A L +EM H I P+ +TY +L+ + L + Q
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 487
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 153/363 (42%), Gaps = 62/363 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
FCN G+ D LR D K+ ++ PN+ +ID G ++ +++++
Sbjct: 406 FCNA----GRWDDGAKLLR--DMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + + + SL++ + L ++ M G ++ ++NIL+ C A
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 518
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
E++ + + +GV+ D TY+T+++ F + +A ++ ++M+S V PN +T+
Sbjct: 519 DGLELF---RKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 574
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
L++ + G E+A+ +FE++ ++ E + NI++ A + D A+ LF S L
Sbjct: 575 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 634
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
KP TYNI+
Sbjct: 635 K-----------------------------------------------GVKPGVKTYNIM 647
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C + L +M G +P+ ++ ILI A G G+ ++++++ ++ G
Sbjct: 648 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 707
Query: 580 SPD 582
S D
Sbjct: 708 SVD 710
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 31/267 (11%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +V + AD A+ + DM+ + P I +S L +A A + + L ++M
Sbjct: 160 SGLVDIKADD-----AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 214
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM---- 482
G N +I++ F R +L +++ + LG Y+ NT S +
Sbjct: 215 KGIAHNLYTLSIMINC------FCRCRKLCLAFSAMGKIIKLG--YEPNTITFSTLINGL 266
Query: 483 --EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
E + +++ V H KP T N L+ C +A L+++
Sbjct: 267 CLEGRVSEALELVDRMVEMGH----------KPDLITINTLVNGLCLSGKEAEAMLLIDK 316
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G PN +++ +++ SG A+++L+ M E + D V Y+ I +
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLL 625
L AF+LF EM+ I N++TY L+
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILI 403
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 114/288 (39%), Gaps = 32/288 (11%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V +S + A K + + L + + M G+ N T S +IN + A
Sbjct: 186 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 245
Query: 423 EMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++++ G EPN+ + L+ C+E + A L DR+
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEG-RVSEALEL--------------------VDRMVE 284
Query: 482 MEHK-DKQSITNTPNFVPNSHYSS-----FDKRFSF--KPTTTTYNILMKACCTDYYRVK 533
M HK D +I N + S + DK + +P TY ++ C
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344
Query: 534 A--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
A L+ +M + + + ++I+ID G+++ A + M G++ +++ Y I
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ R L +M +I PN+VT+ L+ + + G L E ++
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 452
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 173/373 (46%), Gaps = 31/373 (8%)
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ LN Y + L+ ++ + D VY M G D+ +YN+LL A LA +
Sbjct: 225 IKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDA--LAKD 282
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L + Y K ++ K D +TY+ ++++ + +L + E+ML+ G TPN I
Sbjct: 283 EQLDRS-YKVFKDMKLKHC-NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR-- 457
++++I A + +G+V++A+ LF M++ C PN +I+L V Q R +
Sbjct: 341 AYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVS 400
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP--TT 515
+ ++K+ A Y T +S + H + + F +SF
Sbjct: 401 NKFINKSIYA----YLVRT--LSKLGHSSEA-------------HRLFCNMWSFHDGGDR 441
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y ++++ C V+A L++++ G+S + + + ++ G V + +
Sbjct: 442 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++DG PD+ Y I R ++K+A +FEE++ +P++++Y +L+ + G
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGD 561
Query: 634 LHEVQQCLAVYQD 646
+ E QD
Sbjct: 562 VDEAHMRFLEMQD 574
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 48/417 (11%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVY 312
N Y R ++ D ++ +Y ++ S L+I+ +N L++ A D L + +V+
Sbjct: 233 NAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVF 292
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
K+M+ D +Y I+++ + G A+E + + KG ++ Y+T+++
Sbjct: 293 KDMKLKHCNPDEYTYTIMIR---MTGKMGRAEESLALFEEMLTKGCTP-NLIAYNTMIQA 348
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE-P 431
+ + A+ + +M+ PN T+S ++N G + + +E+L+ +
Sbjct: 349 LSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGR----LDEVLEVSNKFI 404
Query: 432 NSQCCNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYD------------GNTDR 478
N L++ + A RLF W+ G D D G T
Sbjct: 405 NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHD-----GGDRDAYISMLESLCRGGKTVE 459
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---------------PTTTTYNILMK 523
+ K + +T + N+ S+ K P TYNIL+
Sbjct: 460 AIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILIS 519
Query: 524 ACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
+ +VK + E+ + P+ IS+ LI+ G +G+V+ A M++ G++
Sbjct: 520 SL-GRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLN 578
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
PDVV Y+T I+ ++ +++ A SLF+ M PN+VTY LL R G E
Sbjct: 579 PDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAET 635
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+YE ++ +I+ +N L++ +K +EV++ ++ D+ SYN L+ C
Sbjct: 498 LYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLIN--C 555
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
L N + E + ++ KG L DV TYST+++ F +MA + + M++ G
Sbjct: 556 LGKNGDV-DEAHMRFLEMQDKG-LNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCC 613
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL--LQACVEACQFDRAF 453
PN +T++ L++ AG + + L+ ++ + G P+S IL LQ+ +R F
Sbjct: 614 PNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGS-----NRKF 668
Query: 454 RLFR-----SWTLS 462
R+ R W +S
Sbjct: 669 RVRRQNPITGWVVS 682
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/440 (18%), Positives = 171/440 (38%), Gaps = 76/440 (17%)
Query: 221 DILFCNFVRE-FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
DI N + + K L + + + K +P+ Y +I + G G +S A++
Sbjct: 268 DIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALF 327
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
E++ ++ T N+ +N+++ + + + ++ NM K + +Y+I+L
Sbjct: 328 EEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAE 387
Query: 338 G------------NTVLAQEIYG-------EVKHLEAKGVLKLDVFT---------YSTI 369
G N + + IY ++ H L ++++ Y ++
Sbjct: 388 GQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISM 447
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ A+++ + G++ +T+ ++++++ V L+E+M Q G
Sbjct: 448 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGP 507
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
P+ NIL+ + + A +F E D D IS
Sbjct: 508 FPDIFTYNILISSLGRVGKVKEAVEVFEEL----------ESSDCKPDIIS--------- 548
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
Y+S N L K D ++ L EM+ GL+P+ +
Sbjct: 549 ------------YNSL------------INCLGKNGDVDEAHMRFL--EMQDKGLNPDVV 582
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+++ LI+ G + VE A + M G P++V Y + R+ R + L+ ++
Sbjct: 583 TYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKL 642
Query: 610 KHYQIQPNLVTYITLLRARS 629
+ + P+ +TY L R +S
Sbjct: 643 REQGLTPDSITYAILDRLQS 662
>gi|298711207|emb|CBJ32428.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 870
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 188/461 (40%), Gaps = 52/461 (11%)
Query: 206 DVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALR----AYDASKKHLS--------- 252
DVNL I + + R + C R+ L+ +R A D K+ L
Sbjct: 83 DVNLEI--SLVHYRGAVTACALTRQLSGVLPLLDEMRDRGVAADVVKRALGLVQMMRSEG 140
Query: 253 -SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+P ++ +CG+ G + + + + +T N Y +NS+ +
Sbjct: 141 LAPTAITYNVLLRLCGLGGCWATGLELMGMMEDEGITPNPYHYNSMFMALERGERWREAA 200
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ M+ G + +Y L+ + Q++ G V + + Y+ +
Sbjct: 201 ELFRKMRACGTRPNALTYAPLIGVM----DRCNKQDMAGAVLKEMLRESPRDSTREYNLL 256
Query: 370 VKVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+ A A+ W+ A V EDM AGV P+ +T++++INA G V++A M + G
Sbjct: 257 LNACAKARKWEHAQLVFEDMKKKAGVKPDNVTYNTVINALGRCGRVKEATVHLHAMKEQG 316
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ L+ AC ++ + + A LF + L E Y G HK
Sbjct: 317 LSPDVVTFGTLIHACAQSAKREPALALFAELVSRGLKPNL-EAYKGCIVSC----HK--- 368
Query: 489 SITNTPNFVPNSHYSS----FDKRFSFKPTT--TTYNILMKACCTD---YYRVKALMNEM 539
HY F++ + K +N + ACC + R A+++EM
Sbjct: 369 ----------TGHYQQGLDLFNRMLADKVRMDRVVFNTAI-ACCAQLKLWRRGVAMLDEM 417
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R ++P+ S+ I C + + +L MREDG PDV Y+ I+ S
Sbjct: 418 RERKVAPDQYSYNSAIYGCVKAQQSQQMTMVLARMREDGFDPDVWTYSNLIRCLADSMLW 477
Query: 600 KQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++A + ++M ++QP+ + +RA S+ G E ++
Sbjct: 478 RRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGEWAEAER 518
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 179/413 (43%), Gaps = 40/413 (9%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE- 310
+ PN +I V C + A+ +++ ++ + +N L+N A K+
Sbjct: 211 TRPNALTYAPLIGVMDRCNKQDMAGAVLKEMLRESPRDSTREYNLLLNACAKARKWEHAQ 270
Query: 311 -VYKNMQK-LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
V+++M+K GV D +YN ++ A G +E + ++ +G L DV T+ T
Sbjct: 271 LVFEDMKKKAGVKPDNVTYNTVINALGRCGRV---KEATVHLHAMKEQG-LSPDVVTFGT 326
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + + AL + +++S G+ PN + I +C G +Q + LF ML
Sbjct: 327 LIHACAQSAKREPALALFAELVSRGLKPNLEAYKGCIVSCHKTGHYQQGLDLFNRMLADK 386
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+ N + C + + R + + + +VA + Y N+ ++ + Q
Sbjct: 387 VRMDRVVFNTAIACCAQLKLWRRGVAMLDE--MRERKVAP-DQYSYNSAIYGCVKAQQSQ 443
Query: 489 SIT------NTPNFVPNSH-YSSFDKRFS--------------------FKPTTTTYNIL 521
+T F P+ YS+ + + +P +N
Sbjct: 444 QMTMVLARMREDGFDPDVWTYSNLIRCLADSMLWRRAVGILDDMLLEGRVQPDAHCFNAA 503
Query: 522 MKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++AC ++ + L+ MR GL+P+ ++ LI A G SG E AL +L+ +R G
Sbjct: 504 VRACSKVGEWAEAERLVTGMRGQGLAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGF 563
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRY 631
+ +AY+ AIK C ++ + ++A L + M + ++PNL Y + A R+
Sbjct: 564 KVNCMAYSAAIKACDKAFQWERALELLDRMVERGGVKPNLFAYNHAMSACVRF 616
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 158/395 (40%), Gaps = 74/395 (18%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
T I C + + A+ +++R + V + Y +NS + V A + V M++
Sbjct: 396 TAIACCAQLKLWRRGVAMLDEMRERKVAPDQYSYNSAIYGCVKAQQSQQMTMVLARMRED 455
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y+ L++ CLA +++L + G + + +G ++ D ++ V+ +
Sbjct: 456 GFDPDVWTYSNLIR--CLA-DSMLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGE 512
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
W A ++ M G+ P+ T++SLI A N+G E+A+ + EE+ AG + N +
Sbjct: 513 WAEAERLVTGMRGQGLAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFKVNCMAYSA 572
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
++AC +A Q++RA L DR+
Sbjct: 573 AIKACDKAFQWERALELL--------------------DRMV------------------ 594
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACC---TDYYRVKALMNEMRTVG-LSPNHI----- 549
+R KP YN M AC Y R K L E G +SP
Sbjct: 595 --------ERGGVKPNLFAYNHAMSACVRFSPPYSRRKELHGEGGGQGAVSPTSFCVPAN 646
Query: 550 ----------SW---TILIDACGGSGNVEGALQILK-IMREDGMSPDVVAYTTAIKVCVR 595
W L++A G G E A++ + R+ P+ Y T ++VC R
Sbjct: 647 LPVFEAGIPGDWYSNHALLEALGRGGRWEEAVKTFEDKKRQADRPPEQTCYKTMLRVCER 706
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+ QA +EM + P L + L+A R
Sbjct: 707 AGFACQAVEYLKEMPAAGVPPTLSHFKQALKACER 741
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 148/359 (41%), Gaps = 38/359 (10%)
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD 304
D ++ +P+ Y + I C + + +R +++ +++L+ A
Sbjct: 415 DEMRERKVAPDQYSYNSAIYGCVKAQQSQQMTMVLARMREDGFDPDVWTYSNLIRCLADS 474
Query: 305 L--KFTLEVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ + + + +M G V D +N ++AC G A+ + V + +G L
Sbjct: 475 MLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGEWAEAERL---VTGMRGQG-LAP 530
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D +TY++++ + ++ W+ AL + E++ +AG N + +S+ I AC A E+A+ L
Sbjct: 531 DKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFKVNCMAYSAAIKACDKAFQWERALELL 590
Query: 422 EEMLQ-AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M++ G +PN N + ACV +F + S+ + GE G +S
Sbjct: 591 DRMVERGGVKPNLFAYNHAMSACV---RFSPPY--------SRRKELHGE--GGGQGAVS 637
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY---RVKALMN 537
++ +P YS+ + L++A VK +
Sbjct: 638 PTSFCVPANLPVFEAGIPGDWYSN--------------HALLEALGRGGRWEEAVKTFED 683
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+ R P + ++ C +G A++ LK M G+ P + + A+K C R+
Sbjct: 684 KKRQADRPPEQTCYKTMLRVCERAGFACQAVEYLKEMPAAGVPPTLSHFKQALKACERA 742
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
A + C+ V E+ + LV+ +R + P+ Y ++I G G++ K+ ++
Sbjct: 502 AAVRACSKVGEWAEAERLVTGMRGQGLA------PDKYTYNSLIYAYGNSGEWEKALSML 555
Query: 280 EDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACC- 335
E++R+ +N +++ + A + LE+ M ++ GV ++ +YN + AC
Sbjct: 556 EEIRAAGFKVNCMAYSAAIKACDKAFQWERALELLDRMVERGGVKPNLFAYNHAMSACVR 615
Query: 336 LAGNTVLAQEIYGEVKHLEA---------------KGVLKLDVFTYSTIVKVFADAKWWQ 380
+ +E++GE A + + D ++ +++ W+
Sbjct: 616 FSPPYSRRKELHGEGGGQGAVSPTSFCVPANLPVFEAGIPGDWYSNHALLEALGRGGRWE 675
Query: 381 MALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
A+K ED A P + +++ C AG QA+ +EM AG P
Sbjct: 676 EAVKTFEDKKRQADRPPEQTCYKTMLRVCERAGFACQAVEYLKEMPAAGVPPTLSHFKQA 735
Query: 440 LQACVEA 446
L+AC A
Sbjct: 736 LKACERA 742
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 20/126 (15%)
Query: 506 DKRFSFKPTTTTYNILMKAC--CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGG 560
D + PT TY + ++AC + KA L+ EMR V L + + + + AC
Sbjct: 43 DGGVGWAPTEETYGLALEACGKVRKRWGFKAPLFLIQEMRDVNLEISLVHYRGAVTACAL 102
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+ + G L +L MR+ G++ DVV K+A L + M+ + P +T
Sbjct: 103 TRQLSGVLPLLDEMRDRGVAADVV---------------KRALGLVQMMRSEGLAPTAIT 147
Query: 621 YITLLR 626
Y LLR
Sbjct: 148 YNVLLR 153
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 53/276 (19%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D TY T++ + A A + +AL + + M A ++P+T T+S +IN AG + A LF
Sbjct: 457 DRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLF 516
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM+ GC PN NI++ +A + A L+R
Sbjct: 517 CEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYR------------------------ 552
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
D Q+ F+P TY+I+M+ C +A+ EM
Sbjct: 553 ----DMQNA-------------------GFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM 589
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ P+ + +L+D G GNVE + + + M G+ P+V + + +R RL
Sbjct: 590 KRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRL 649
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLL----RARSRY 631
A++L + M +QP+L TY LL ARS +
Sbjct: 650 SDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSF 685
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L AL Y ++ SP+ + II+ G G + ++ +
Sbjct: 459 VTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCE 518
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q N+ +N + + A + LE+Y++MQ G D +Y+I+++ G+
Sbjct: 519 MVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGH 578
Query: 340 TVLAQEIYGEVKH---LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
A+ I+ E+K + + V L V + + V +W+Q ML+AG+ P
Sbjct: 579 LEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQA-------MLNAGLCP 631
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
N T +SL++A + A +L + ML+ G +P+ Q +LL C EA FD F
Sbjct: 632 NVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDMGF 689
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
L+ + K D TY+T+V + A+ + K+ +M+ G PN +T++ LI++ A
Sbjct: 378 LKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRAN 437
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A+ +F+ M +AGC+P+ L+ +A D A +++
Sbjct: 438 YLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQ--------------- 482
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPN-----SHYSSFDKRF------SFKPTTTTYNIL 521
M+ T T + + N H +S K F P TYNI+
Sbjct: 483 --------KMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIM 534
Query: 522 --MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++A +Y L +M+ G P+ ++++I+++ G G++E A I M+
Sbjct: 535 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 594
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD Y + + + +++++ ++ M + + PN+ T +LL A R +H +
Sbjct: 595 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLR---VHRLSD 651
Query: 640 CLAVYQDMWKAG 651
+ Q M + G
Sbjct: 652 AYNLLQSMLRLG 663
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ +D ++ P+ T+ID+ G + +Y+
Sbjct: 424 VTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQK 483
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ +++ + + ++ ++N A L +++ M G + ++ +YNI++ A N
Sbjct: 484 MQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARN 543
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A E+Y ++++ + D TYS +++V + A + +M P+
Sbjct: 544 YPTALELYRDMQN----AGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEP 599
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ G VE++ ++ ML AG PN CN LL A F R RL ++
Sbjct: 600 VYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSA------FLRVHRLSDAY 653
Query: 460 TLSKTQVALG 469
L ++ + LG
Sbjct: 654 NLLQSMLRLG 663
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T++ + G + + ++ N+ +N L++ A+ L + V+ MQ+
Sbjct: 393 TMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEA 452
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D +Y L+ AG +A +Y +++ L D FTYS I+ A
Sbjct: 453 GCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH----LSPDTFTYSVIINCLGKAGH 508
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ +M+ G PN +T++ +I A A A+ L+ +M AG +P+ +I
Sbjct: 509 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 568
Query: 439 LLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHKDK--QSIT 491
+++ + A +F ++W + L D G ++ N+E + Q++
Sbjct: 569 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWG---KVGNVEKSWEWYQAML 625
Query: 492 NT---PNFVP--NSHYSSFDK---------------RFSFKPTTTTYNILMKACCTD 528
N PN VP NS S+F + R +P+ TY +L+ +CCT+
Sbjct: 626 NAGLCPN-VPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL-SCCTE 680
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 161/378 (42%), Gaps = 58/378 (15%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
SSP Y +ID+ G + + + + ++S+ V + + F+ L+ V A +
Sbjct: 141 SSPEPY--NEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAV 198
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M+ G D S++I++ + C A+ + +KH + DV Y+++
Sbjct: 199 HAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKH-----KFEPDVIVYTSL 253
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V + A A +V DM AGV PN T+S +I++ G + +A +F EM+ AGC
Sbjct: 254 VHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 313
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN+ N L++ V+A + ++ +++
Sbjct: 314 DPNAVTFNSLMRVHVKAGRTEKVLQVYNQM------------------------------ 343
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPN 547
KR T +YN L+++ C D +A +++ M G++PN
Sbjct: 344 -----------------KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPN 386
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ + +V GA ++ M+E P+ + Y +++ SK + L +
Sbjct: 387 ASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKK 446
Query: 608 EMKHYQIQPNLVTYITLL 625
EM +++PN+ TY L+
Sbjct: 447 EMDESEVEPNVNTYRILI 464
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I++ + V + + D+ A + K+ PN+Y +ID CG ++ ++ +
Sbjct: 248 IVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSE 307
Query: 282 LRSQNVTLNIYVFNSLM--NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC---- 335
+ N FNSLM +V A + L+VY M++LG AD SYN L+++ C
Sbjct: 308 MIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDEN 367
Query: 336 ---------------LAGNTVLAQEIYGEVKHL-EAKGVLKL-----------DVFTYST 368
+A N I+G + L + G ++ + TY+
Sbjct: 368 LDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNI 427
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++++FAD+K M LK+K++M + V PN T+ LI G A +L +EM++
Sbjct: 428 LMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEK 487
Query: 429 C-EPNSQCCNILLQACVEACQFDR 451
C +PN +L+ A Q +
Sbjct: 488 CLKPNLSIYETVLELLRNAGQLKK 511
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KKR A +D S KH P++ + +++ GD K+ ++ D++ V N+Y
Sbjct: 225 KKRRASEAELFFD-SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY 283
Query: 293 VFNSLMN--------VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
++ +++ AHD V+ M G + ++N L++ AG T
Sbjct: 284 TYSIVIDSLCRCGQITRAHD------VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVL 337
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
++Y ++K L D +Y+ +++ + A+KV + M+ GV PN T++S+
Sbjct: 338 QVYNQMKRLGCAA----DTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSI 393
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKT 464
A V A ++ +M + C PN+ NIL++ ++ D +L + S+
Sbjct: 394 FGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEV 453
Query: 465 Q 465
+
Sbjct: 454 E 454
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 58/316 (18%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M+ GV ++++++L++ AG LA E +E G K D ++S ++
Sbjct: 169 MKSRGVRITVSTFSVLVRRYVRAG---LAAEAVHAFNRMEDYGC-KPDKVSFSIVISSLC 224
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A ++ D L P+ I ++SL++ AG + +A +F +M +AG +PN
Sbjct: 225 KKRRASEA-ELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY 283
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+I++ + Q RA +F E D D
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVF------------SEMIDAGCD----------------- 314
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHIS 550
P T+N LM KA T+ +V + N+M+ +G + + IS
Sbjct: 315 ------------------PNAVTFNSLMRVHVKAGRTE--KVLQVYNQMKRLGCAADTIS 354
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI++ N++ A+++L M + G++P+ + + + A ++ +MK
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414
Query: 611 HYQIQPNLVTYITLLR 626
+ PN +TY L+R
Sbjct: 415 ELKCMPNTLTYNILMR 430
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++ + + + +A + + M S GV T+S L+ AGL +A+H F M
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
GC+P+ +I++ + + + A F S ++HK
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDS-----------------------LKHK 242
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
F+P Y L+ C D + + + ++M+ G
Sbjct: 243 -------------------------FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAG 277
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ PN +++I+ID+ G + A + M + G P+ V + + ++V V++ R ++
Sbjct: 278 VKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVL 337
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++ +MK + ++Y L+ + + +L E + L
Sbjct: 338 QVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVL 375
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L++ M++ G+ ++++L+ +G A+ M + G PD V+++ I
Sbjct: 165 LIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLC 224
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +R +A F+ +KH + +P+++ Y +L+ R G + + ++ V+ DM +AG
Sbjct: 225 KKRRASEAELFFDSLKH-KFEPDVIVYTSLVHGWCRAGDIAKAEE---VFSDMKEAG 277
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 161/370 (43%), Gaps = 39/370 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ + +ID G K+ + + + + + N+ +N L+N + +K + V
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M + GV D+ +YN L+K L+ + + ++ + + K ++K +V T++++++
Sbjct: 278 LKKMSEKGVAPDVVTYNTLIKG--LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
D + A +V+ M G N +T++ LI V +AM L +EM G EP
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----------VALGEDYDGNTDRISN 481
+S +IL++ + Q DRA L + + VA+ E G +R N
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQ--GMMERARN 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ ++ D F Y+ ++ C D K L+ +
Sbjct: 454 L-------------------FNEMDNNFPLD--VVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL+P+ ++++I+I+ SG++E A +LK M G PDV + + I+ +
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 600 KQAFSLFEEM 609
+ L EM
Sbjct: 553 NKVLELIREM 562
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 52/328 (15%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYN +L A C G+ A + LE + + +Y+ +++ + A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALL-RAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ + M SAGV + +T+ +LI +A V++A+ L EM ++G EPN + LLQ
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
++ +++ ++F +E +K
Sbjct: 195 YCKSGRWEDVGKVF-------------------------VEMSEK--------------- 214
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P Y L+ + C + +M+ M GL PN +++ +LI+
Sbjct: 215 -------GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCK 267
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNL 618
G+V+ A+ +LK M E G++PDVV Y T IK + +A L EEM + ++PN+
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNV 327
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQD 646
VT+ ++++ G + + Q A+ ++
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 168/390 (43%), Gaps = 41/390 (10%)
Query: 268 ICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+C D + +A+ +RS V ++ + +L+ +A ++ +E+ M + G+ +
Sbjct: 125 LCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPN 184
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ Y+ LL+ C +G +++ E + KG+ + DV Y+ ++ + A
Sbjct: 185 VVVYSSLLQGYCKSGRWEDVGKVFVE---MSEKGI-EPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
V + M+ G+ PN +T++ LIN G V++A+ + ++M + G P+ N L++
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 444 VEACQFDRAFRLFRSWTLSK-----TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ + D A L K V G D I M
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD-IGRMRQ-------------- 345
Query: 499 NSHYSSFDKRFSFKPTT-----TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
+F R + T TYN+L+ + KA LM+EM ++GL P+ ++
Sbjct: 346 -----AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ILI V+ A +L MR+ G+ P++ Y + +++A +LF EM +
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN 460
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
++V Y T++ + G L ++ L
Sbjct: 461 -NFPLDVVAYSTMIHGACKAGDLKTAKELL 489
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 143/341 (41%), Gaps = 57/341 (16%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++M+ GV AD+ +Y L++ C A A E+ GE+ + ++ +V YS+++
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM----CESGIEPNVVVYSSLL 192
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + + W+ KV +M G+ P+ + ++ LI++ G ++A + + M++ G E
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN N+L+ + A + + +S+ VA
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKK--MSEKGVA----------------------- 287
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEM---RTVGLS 545
P TYN L+K +A L+ EM + + +
Sbjct: 288 ----------------------PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VK 324
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ +I G + A Q+ +M E G ++V Y I +R ++++A L
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+EM ++P+ TY L++ + + + L+ +D
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+ TY L++ C KA LM EM G+ PN + ++ L+ SG E +
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ M E G+ PDVV YT I + + K+A + + M ++PN+VTY L+
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ GS V++ + V + M + G
Sbjct: 267 KEGS---VKEAIGVLKKMSEKG 285
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 36/243 (14%)
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K++ PN+ ++I G+C G ++ + + +N+ +N L+ + H
Sbjct: 320 KNIVKPNVVTFNSVIQ--GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE---------IYGEVKHL-- 353
++ +E+ M LG+ D +Y+IL+K C A++ I E+ H
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437
Query: 354 -------------------EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
E LDV YST++ A + A ++ + ++ G+
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ +T+S +IN A +G +E A + ++M +G P+ + L+Q + ++
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557
Query: 455 LFR 457
L R
Sbjct: 558 LIR 560
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y+ ++ C AG+ A+E+ +K + +G L D TYS ++ +FA + + A
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKEL---LKSIVDEG-LTPDAVTYSIVINMFAKSGDMEAA 520
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
V + M ++G P+ + SLI + G + + + L EM+ +S+ + L
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 192/443 (43%), Gaps = 31/443 (6%)
Query: 212 RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGD 271
+ +C R+ N + E G+ +++ S L D+ + P++ T++ I
Sbjct: 66 KTSCRTVRSRTKLMNIMIEKGRPQEVQSIL---DSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
+ +I + + + FN+++N + +++ ++ + M++ G +++N
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+K +AG +Q++ + E ++ ++ TY+ +V+ + + K A V M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDEN---VRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+++G+ P+ +T++++ A A G QA + EM + +PN + C I++ + +
Sbjct: 240 VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKI 299
Query: 450 DRAFRL---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
A + + L V G D + D+ + +
Sbjct: 300 KEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAV------DRDGVNEVLTLM--------- 344
Query: 507 KRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNV 564
+ F KP T++ +M A + + + + ++M + P+ ++IL +G
Sbjct: 345 EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEP 404
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E A +IL M + G P+VV +TT I + R++ A +FE+M I PNL T+ TL
Sbjct: 405 EKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETL 464
Query: 625 LRARSRYGSLHEVQQCLAVYQDM 647
+ YG + + V Q M
Sbjct: 465 IWG---YGEARQPWKSEEVLQIM 484
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 171/415 (41%), Gaps = 20/415 (4%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
++C V + R+ AL Y + N I I+ G ++ ++E+
Sbjct: 332 VYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEF 391
Query: 283 RSQNVTLNIYVFNSLMNV-----NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + ++ +N L + D L+ K+MQ + DM Y L+ L
Sbjct: 392 KESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ---LDVDMKHYTTLINGYFLQ 448
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G + AQ ++ K +E +G K DV Y+ + F + A+ + M S GV PN
Sbjct: 449 GKPIEAQSLF---KEMEERG-FKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPN 504
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ T +I +AG VE+A F + E + + L+ EA +++ L
Sbjct: 505 STTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKE 564
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
++ L +T + + N M K ++ N + F P T
Sbjct: 565 AFILLRTMLEM------NMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVT 618
Query: 518 YNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
Y I++ C +A L +M+ G++P+ +++TI+I+ + A ++ K M+
Sbjct: 619 YTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMK 678
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
E G+ PDV+AYT IK + S + AF L+ EM + P + +A R
Sbjct: 679 ERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCIQKANKR 733
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 190/437 (43%), Gaps = 35/437 (8%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--DYMKSRAIYEDLRSQ 285
+R F + L A + +K P++Y+ ++ G C ++ K+ A+Y+ + S+
Sbjct: 302 IRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVH--GYCNSRNFDKALAVYKSMISR 359
Query: 286 NVTLNIYVFNSLMNVNAHDLKFTLEV---YKNMQKLGVMADMASYNILLKACCLAGNTVL 342
+ N +F+ +++ ++ LEV ++ ++ G+ D +YNIL A C G
Sbjct: 360 GIKTNCVIFSCILHC-LDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDD 418
Query: 343 AQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + E+K ++ L +D+ Y+T++ F K + KE M G P+ + +
Sbjct: 419 AVGMLDELKSMQ----LDVDMKHYTTLINGYFLQGKPIEAQSLFKE-MEERGFKPDVVAY 473
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ L +AM L M G EPNS I+++ A + + A F +W
Sbjct: 474 NVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFF-NWLK 532
Query: 462 SKTQVALGEDYDGNTD-----RISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
++ E Y + + H+ K++ + + KP+
Sbjct: 533 GESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTML----------EMNMKPSKV 582
Query: 517 TYNILMKA-CCT-DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
Y+ + A CC + L N G +P+ +++TI+I+ + + A ++ K M
Sbjct: 583 MYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDM 642
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+E G++PD V YT I + L++A LF++MK I+P+++ Y +++ G
Sbjct: 643 KERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSG-- 700
Query: 635 HEVQQCLAVYQDMWKAG 651
+ +Y +M G
Sbjct: 701 -HTEIAFQLYNEMIDMG 716
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 194/471 (41%), Gaps = 68/471 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK--SRAIYEDLRSQ 285
++ KK D + +R +D K+ + Y T I+ G+C + A+ +D R++
Sbjct: 232 IKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIE--GLCKNNRSDLGYAVLQDYRTR 289
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
N ++ Y + +++ N L V+ M+K G++ D+ Y L+ C + N A
Sbjct: 290 NAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKA 349
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVK----------------------VFADAKWWQM 381
+Y K + ++G+ K + +S I+ +F D K + +
Sbjct: 350 LAVY---KSMISRGI-KTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNI 405
Query: 382 -------------ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
A+ + +++ S + + +++LIN G +A LF+EM + G
Sbjct: 406 LFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERG 465
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P+ N+L A F R F + L + G + + T +I +
Sbjct: 466 FKPDVVAYNVL------AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKII------IE 513
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--------LMNEMR 540
+ + + ++ K S + + Y L+ C K+ L+ M
Sbjct: 514 GLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTML 573
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
+ + P+ + ++ + A +GN+EGA + + G +PD V YT I ++ L
Sbjct: 574 EMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLP 633
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A LF++MK I P+ VTY ++ + L E + +++DM + G
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHE---LFKDMKERG 681
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 161/370 (43%), Gaps = 39/370 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ + +ID G K+ + + + + + N+ +N L+N + +K + V
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M + GV D+ +YN L+K L+ + + ++ + + K ++K +V T++++++
Sbjct: 278 LKKMSEKGVAPDVVTYNTLIKG--LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
D + A +V+ M G N +T++ LI V +AM L +EM G EP
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----------VALGEDYDGNTDRISN 481
+S +IL++ + Q DRA L + + VA+ E G +R N
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQ--GMMERARN 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEM 539
+ ++ D F Y+ ++ C D K L+ +
Sbjct: 454 L-------------------FNEMDNNFPLD--VVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
GL+P+ ++++I+I+ SG++E A +LK M G PDV + + I+ +
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 600 KQAFSLFEEM 609
+ L EM
Sbjct: 553 NKVLELIREM 562
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 52/328 (15%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D SYN +L A C G+ A + LE + + +Y+ +++ + A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALL-RAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ + M SAGV + +T+ +LI +A V++A+ L EM ++G EPN + LLQ
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
++ +++ ++F +E +K
Sbjct: 195 YCKSGRWEDVGKVF-------------------------VEMSEK--------------- 214
Query: 503 SSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+P Y L+ + C + +M+ M GL PN +++ +LI+
Sbjct: 215 -------GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCK 267
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ--IQPNL 618
G+V+ A+ +LK M E G++PDVV Y T IK + +A L EEM + ++PN+
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNV 327
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQD 646
VT+ ++++ G + + Q A+ ++
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 41/395 (10%)
Query: 268 ICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMAD 323
+C D + +A+ +RS V ++ + +L+ +A ++ +E+ M + G+ +
Sbjct: 125 LCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPN 184
Query: 324 MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMAL 383
+ Y+ LL+ C +G +++ E+ KG+ + DV Y+ ++ + A
Sbjct: 185 VVVYSSLLQGYCKSGRWEDVGKVFVEMSE---KGI-EPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 384 KVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQAC 443
V + M+ G+ PN +T++ LIN G V++A+ + ++M + G P+ N L++
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 444 VEACQFDRAFRLFRSWTLSK-----TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+ + D A L K V G D I M
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD-IGRMRQ-------------- 345
Query: 499 NSHYSSFDKRFSFKPTT-----TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISW 551
+F R + T TYN+L+ + KA LM+EM ++GL P+ ++
Sbjct: 346 -----AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ILI V+ A +L MR+ G+ P++ Y + +++A +LF EM +
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN 460
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
++V Y T++ + G L ++ L D
Sbjct: 461 -NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
+ TY L++ C KA LM EM G+ PN + ++ L+ SG E
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ M E G+ PDVV YT I + + K+A + + M ++PN+VTY L+
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 264
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
+ GS V++ + V + M + G
Sbjct: 265 MCKEGS---VKEAIGVLKKMSEKG 285
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 108/243 (44%), Gaps = 36/243 (14%)
Query: 249 KHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHD 304
K++ PN+ ++I G+C G ++ + + +N+ +N L+ + H
Sbjct: 320 KNIVKPNVVTFNSVIQ--GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ-------------EIYGEVK 351
++ +E+ M LG+ D +Y+IL+K C A+ E++ +
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437
Query: 352 HLEA---KGVLK--------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
L A +G+++ LDV YST++ A + A ++ + ++ G+
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
TP+ +T+S +IN A +G +E A + ++M +G P+ + L+Q + ++
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557
Query: 455 LFR 457
L R
Sbjct: 558 LIR 560
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +Y+ ++ C AG+ A+E+ +K + +G L D TYS ++ +FA + + A
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKEL---LKSIVDEG-LTPDAVTYSIVINMFAKSGDMEAA 520
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
V + M ++G P+ + SLI + G + + + L EM+ +S+ + L
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 31/336 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVALGEDYDGNTDRISNMEH 484
L+ +A D A +++ ++T S LG+ E
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 485 KDKQSITN--TPNFVPNSH-----YSSFDKRF------SFKPTTTTYNILMK--ACCTDY 529
D+ N T N + + H Y S K + F+P TY+I+M+ C
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A+ EM+ P+ + +L+D G +GNVE A Q + M G+ P+V +
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSL 615
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
+ +R ++ +A+ L + M ++P+L TY LL
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++ + +A L + ML G P+ Q +LL C +
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T TYN L+ + Y +A+ N+M+ G P+ +++ LID +G ++ A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 516 KAR-----NYQSALKLYRDMQNAG 534
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQSALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 102/248 (41%), Gaps = 48/248 (19%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
++ DR++ T +
Sbjct: 426 ----------QEAGCKPDRVT---------------------------------YCTLID 442
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M + G
Sbjct: 443 IHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L E +
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE- 559
Query: 640 CLAVYQDM 647
AV+ +M
Sbjct: 560 --AVFTEM 565
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M G
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRMQAGG 464
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + YG + + + + V+ M +AG
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAG 429
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 18/335 (5%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV-LKLDVFTYST 368
EVY+ M K+ V D + I++ AG + A+E++ + + KGV DVF
Sbjct: 294 EVYEAMNKINVFPDNVTCAIMITTMRKAGRS--AKEVWEIFEKMSDKGVKWSQDVF--GG 349
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+VK F D + AL ++ +M G+ NTI +++L++A + +E+ LF E+ G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKG 409
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+P + NIL+ A Q D L R + L + T IS K
Sbjct: 410 LKPTAATYNILMDAYARRMQPDIVETLLREM----EDLGLEPNVKSFTCLISAYGRTKKM 465
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
S F+ K+ KP++ +Y L+ A + KA EM G+ P
Sbjct: 466 SDMAADAFLRM-------KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKP 518
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++T L+DA SG+ E ++I K+M + + + Y T + + +A +
Sbjct: 519 SVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
E +QP+++TY L+ A +R G ++ Q L
Sbjct: 579 SEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 153/370 (41%), Gaps = 22/370 (5%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS-RAIYEDLRSQNVTLNIYVFNSLM 298
A Y+A K P+ C +I G K I+E + + V + VF L+
Sbjct: 292 AWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEIFEKMSDKGVKWSQDVFGGLV 351
Query: 299 NVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ + L + M+K G+ ++ YN L+ A + + + ++ E+K AK
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIK---AK 408
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-LVE 415
G LK TY+ ++ +A + + +M G+ PN +++ LI+A + +
Sbjct: 409 G-LKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSD 467
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A F M + G +P+S L+ A + ++A+ F + + ++ E Y
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSV-ETYTSL 526
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVK 533
D D + + + R K T TYN L+ Y +
Sbjct: 527 LDAFRR--SGDTEKLMEIWKLM---------LREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
+++E +GL P+ +++ +L++A G Q+LK M + PD + Y+T I
Sbjct: 576 DVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 594 VRSKRLKQAF 603
VR + K+AF
Sbjct: 636 VRVRDFKRAF 645
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 147/332 (44%), Gaps = 29/332 (8%)
Query: 265 VCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGV 320
V C + +K A I ++ + + N V+N+LM+ ++ ++ ++ ++ G+
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKGL 410
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW- 379
A+YNIL+ A + + + E++ L L+ +V +++ ++ + K
Sbjct: 411 KPTAATYNILMDAYARRMQPDIVETLLREMEDLG----LEPNVKSFTCLISAYGRTKKMS 466
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
MA M G+ P++ ++++LI+A + +G E+A FEEM G +P+ + L
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSL 526
Query: 440 LQACVEACQFDRAFRLFRSWTLSK---TQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
L A + ++ +++ K T++ DG + +E +D
Sbjct: 527 LDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV--------- 577
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTIL 554
S F K +P+ TYN+LM A K L+ EM + L P+ I+++ +
Sbjct: 578 -----VSEFGK-MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
I A + + A K+M + G PD +Y
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
++ M G+ + +Y LL A +G+T EI+ + + KG TY+T++
Sbjct: 508 FEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTR----ITYNTLLD 563
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
FA + A V + G+ P+ +T++ L+NA A G + L +EM +P
Sbjct: 564 GFAKQGLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKP 623
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG----NTDRISNMEHKDK 487
+S + ++ A V F RAF + + QV Y+ +++ KDK
Sbjct: 624 DSITYSTMIYAFVRVRDFKRAF-FYHKMMVKSGQVPDPRSYEKLRAILENKVKTKNRKDK 682
Query: 488 QSI 490
+I
Sbjct: 683 TAI 685
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 138/343 (40%), Gaps = 53/343 (15%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K Y+ + + G A + +NIL+ C G+ +AQ ++ + K L+ V
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI----TKWGLRPSVV 178
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+T++ + ++K ML++GV P+ T+S LIN ++ A LF+EM
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEM 238
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
L G PNS L+ + + D A ++
Sbjct: 239 LVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIY---------------------------- 270
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
KQ ++ S P TYN L+ C D + L++EM
Sbjct: 271 --KQMLSQ-----------------SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 311
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
GL P+ I++T LID C G+++ A + K M ++ D V YT I R + A
Sbjct: 312 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDA 371
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQ 645
+ EM ++P+ TY ++ + G + + + L Q
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 37/381 (9%)
Query: 219 RADI-LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R+D+ +F + + + L A+ Y +++H CR +++ +
Sbjct: 69 RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
YE++ ++Y FN LM+ D++ V+ + K G+ + SYN L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ E + + A GV + DV+TYS ++ A ++ ++ML G+
Sbjct: 189 RLGD---LDEGFRLKSAMLASGV-QPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV 244
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN++T+++LI+ G V+ AM ++++ML P+ N L+ + +A L
Sbjct: 245 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 456 FRSWTL--------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
++ + T + G DG+ D + EH+ + NT
Sbjct: 305 IDEMSMKGLKPDKITYTTLIDGCCKDGDLD--TAFEHRKRMIQENT-------------- 348
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ Y L+ C + V A ++ EM +VGL P+ ++T++I+ G+V
Sbjct: 349 ----RLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404
Query: 566 GALQILKIMREDGMSPDVVAY 586
++LK M+ DG P VV Y
Sbjct: 405 KGSKLLKEMQRDGHVPSVVTY 425
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
K++++ E++L G + ++ L++ G + A +F+ + + G P+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSY 180
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF 496
N L+ + D FRL + S Q
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------- 209
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
P TY++L+ C + A L +EM GL PN +++T L
Sbjct: 210 ----------------PDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTL 253
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID +G V+ A++I K M +SPD++ Y T I + LKQA L +EM +
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGL 313
Query: 615 QPNLVTYITLLRARSRYGSL 634
+P+ +TY TL+ + G L
Sbjct: 314 KPDKITYTTLIDGCCKDGDL 333
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ID G C G + IY+ + SQ+++ ++ +N+L+ DLK
Sbjct: 245 PNSVTFTTLID--GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G+ D +Y L+ CC G+ A E K + + +LD Y+ +
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFE---HRKRMIQENT-RLDDVVYTAL 358
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ +MLS G+ P+ T++ +IN G V + L +EM + G
Sbjct: 359 ISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGH 418
Query: 430 EPNSQCCNILLQA 442
P+ N+L+
Sbjct: 419 VPSVVTYNVLMNG 431
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 173/398 (43%), Gaps = 34/398 (8%)
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLK 332
+R E+ R + + +N LM+ + T+ ++ K G+ D+ +ILLK
Sbjct: 103 NRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLK 162
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML-- 390
CL + + ++ + H + ++ D +Y+T+VK + Q AL + M+
Sbjct: 163 --CLY-HAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKK 219
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
S G +PN +T++++I+ G V +A +LF EM+Q G P+ ++ A +A D
Sbjct: 220 SGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMD 279
Query: 451 RAFRLFRSWTLSKTQ--------VALGEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSH 501
+A + R + Q + G G + M ++ S PN V NS+
Sbjct: 280 KAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGM-FREMTSQGLMPNIVTCNSY 338
Query: 502 YSSFDKRF---------------SFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGL 544
SS K KP TY++L+ T+ + + L N M G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+ + I+IDA G G ++ + I M+E G+ PD Y I R RL A
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
F +M ++P + Y +L++ +G+L + ++ ++
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVS 496
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 19/325 (5%)
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
K T +++ M G+M ++ + N + + C G + A E + + AKG K ++ T
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF---DSMAAKG-HKPNLVT 369
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
YS ++ +A + L + M G+ + ++ +I+A G++++ M +F +M
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ G P++ I++ A F R RL + +A+G +G + H
Sbjct: 430 EQGVIPDACTYGIVIAA------FSRMGRLADAMDKFNQMIAMGLKPEGI------VYHS 477
Query: 486 DKQSITNTPNFVPNSHY-SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
Q N V S R +P +N ++ + C + V+A + + + +
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G P+ I++ LID G G +E A +L M G+ PDVV+Y T I R+ R+
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRA 627
LF EM ++P +TY +L
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHG 622
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 178/420 (42%), Gaps = 47/420 (11%)
Query: 268 ICGDYMKSRAIYEDL------RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLG 319
+C D RA+ DL +S + N+ +N++++ ++ ++ M + G
Sbjct: 200 LCEDSRSQRAL--DLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQG 257
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V+ D+ +Y ++ A C A A+ + ++ + + G + + TY+ ++ ++ + W
Sbjct: 258 VVPDVVTYTSIIDALCKARAMDKAELV---LRQMISNG-FQPNKVTYNCMIHGYSISGQW 313
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M S G+ PN +T +S +++ G ++A F+ M G +PN ++L
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 440 LQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP---- 494
L E C D LF S VA ++ D D+ + T
Sbjct: 374 LHGYATEGCFVD-MLNLFNSME-GNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ 431
Query: 495 NFVPNS-HYSSFDKRFS-------------------FKPTTTTYNILMKACCTDYYRVKA 534
+P++ Y FS KP Y+ L++ C VKA
Sbjct: 432 GVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKA 491
Query: 535 --LMNEMRTVGLS-PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
L++EM + G+ PN + + +I++ G V A I + G PDV+ + + I
Sbjct: 492 KELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLID 551
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++++AF + + M I+P++V+Y TL+ R G + L ++ +M G
Sbjct: 552 GYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG---RIDDGLILFGEMLSKG 608
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 157/392 (40%), Gaps = 69/392 (17%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTL-NIYVFNSLMN--------VNAHDLKFTLEVYKNM 315
G C G+ +K++ + ++ S+ + NI FNS++N V AHD ++ +
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHD------IFDFV 534
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+G D+ ++N L+ L G ++ +G + + + G+ + DV +Y+T++ +
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKI---EKAFGVLDAMISAGI-EPDVVSYNTLIDGYCR 590
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
L + +MLS GV P TIT+ +++ N G A + EM+++G +
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 436 CNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
C I+L C C D A +F+ ++ M K +I NT
Sbjct: 651 CGIILGGLCRNNCD-DEAIAMFK--------------------KLGAMNVKFNIAIINT- 688
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTIL 554
D + + K L + + GL PN ++ ++
Sbjct: 689 ---------MIDAMYKVRKRE---------------EAKELFDSISATGLVPNASTYGVM 724
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I G+VE A + +M + G +P I+V + + +A + ++ +I
Sbjct: 725 IKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRI 784
Query: 615 QPNLVTYITLLRARSRYGSLHE-VQQCLAVYQ 645
T L+ SR G E V+ A YQ
Sbjct: 785 SLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 36/271 (13%)
Query: 217 VPRADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+PR +I+F N + K+ +V A +D P++ ++ID G+ G K+
Sbjct: 503 IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKA 562
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKA 333
+ + + S + ++ +N+L++ + + L ++ M GV +Y I+L
Sbjct: 563 FGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHG 622
Query: 334 CCLAGNTVLAQEIYGEV--------------------------------KHLEAKGVLKL 361
G TV A+++ E+ K L A V K
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNV-KF 681
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
++ +T++ + + A ++ + + + G+ PN T+ +I G VE+A ++F
Sbjct: 682 NIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMF 741
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
M ++GC P+S+ N +++ +E + +A
Sbjct: 742 SLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 513 PTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
PT TYNILM CC AL GL + I +IL+ + + + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 571 L-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM--KHYQIQPNLVTYITLLRA 627
L M E G+ PD ++Y T +K R ++A L M K PN+VTY T++
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G EV + ++ +M + G
Sbjct: 237 LFREG---EVSKACNLFHEMMQQG 257
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 179/411 (43%), Gaps = 31/411 (7%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--V 300
A A + SP + ++D C + A + L + ++I + N L+
Sbjct: 98 ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFC 157
Query: 301 NAHDLKFTLEVY-KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
A L++ +LG + D+ SY+ILLK+ C G + A ++ + E V
Sbjct: 158 EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA--EGGAVC 215
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
DV Y+T++ F A + ++M+ G+ P+ +T+SS+++A A +++A
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+M+ G PN+ N L+ Q+ A R+F+ + Q L + N
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRQSILPDVVTFNMLMG 332
Query: 480 SNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM-----KACCTDYYR 531
S ++ K+ + + +T + P +YNI++ K C D
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQN------------PDVFSYNIMLNGYATKGCLVD--- 377
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+ L + M G++P ++ +LI A G ++ A+ I MR+ G+ P+V+ YTT I
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
R ++ A F +M + P+ Y L++ +GSL + ++ ++
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS 488
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 156/380 (41%), Gaps = 24/380 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN + +I G + ++ +++++R Q++ ++ FN LM +K +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M G D+ SYNI+L G V +++ + G+ + + T++ ++K
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF---DLMLGDGIAPV-ICTFNVLIK 402
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+A+ A+ + +M GV PN +T++++I A G ++ AM F +M+ G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ--VALGEDYDGNTDRISNMEHKDKQS 489
+ + L+Q +A L + + L N ++ + D Q+
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV--MDAQN 520
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPN 547
I + PT Y++LM C KAL + M + G+ PN
Sbjct: 521 IFD------------LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ + L++ G ++ L + + M + G+ P + Y I + R A F
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 608 EMKHYQIQPNLVTYITLLRA 627
EM I N TY +LR
Sbjct: 629 EMTESGIAMNKCTYSIVLRG 648
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
K+ A + ++ V N + +N+L+ + K + V+K M++ ++ D+ ++N+L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
+ C G A++++ + KG DVF+Y+ ++ +A + + ML
Sbjct: 332 GSLCKYGKIKEARDVF---DTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G+ P T++ LI A AN G++++AM +F EM G +PN ++ A + D
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
A F Q +
Sbjct: 448 AMEKFNQMI--------------------------DQGVA-------------------- 461
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
P Y+ L++ CT + K L++E+ G+ + + ++ +I+ G V A
Sbjct: 462 -PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
I + G+ P V Y+ + ++++A +F+ M I+PN V Y TL+
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
+ G + E L+++++M + G
Sbjct: 581 KIGRIDE---GLSLFREMLQKG 599
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 160/389 (41%), Gaps = 62/389 (15%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMAS 326
CG K+ I+ ++R V N+ + +++ K +E + M GV D +
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 327 YNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVK 386
Y+ L++ C G+ + A+E+ E+ + + LD+ +S+I+ A +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMN----NGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522
Query: 387 EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
+ ++ G+ P + +S L++ G +E+A+ +F+ M+ AG EPN L+ +
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582
Query: 447 CQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD 506
+ D LFR L K
Sbjct: 583 GRIDEGLSLFREM-LQK------------------------------------------- 598
Query: 507 KRFSFKPTTTTYNI----LMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
KP+T YNI L +A T +VK +EM G++ N +++I++ +
Sbjct: 599 ---GIKPSTILYNIIIDGLFEAGRTVPAKVK--FHEMTESGIAMNKCTYSIVLRGLFKNR 653
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A+ + K +R + D++ T I +++R+++A LF + + P +VTY
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + G + E + ++ M AG
Sbjct: 714 IMITNLIKEGLVEEAED---MFSSMQNAG 739
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 35/265 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+LF + + K ++ A +D + P + ++D + G K+ +++
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S + N V+ +L+N + L +++ M + G+ YNI++ AG
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 340 TVLAQEIYGEV--------------------------------KHLEAKGVLKLDVFTYS 367
TV A+ + E+ K L A V K+D+ T +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV-KIDIITLN 678
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ + + A + + +G+ P +T+S +I GLVE+A +F M A
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Query: 428 GCEPNSQCCNILLQACVEACQFDRA 452
GCEP+S+ N +++ ++ + RA
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRA 763
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 53/260 (20%)
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
++P + T++ L++ C A E A+ F ++L+ G + N LL+ EA + D A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + TP P
Sbjct: 167 DIL---------------------------------LHRTP-------------ELGCVP 180
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGL--SPNHISWTILIDACGGSGNVEGALQ 569
+Y+IL+K+ C +A L+ M G SP+ +++ +ID G+V A
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K M + G+ PD V Y++ + +++ + +A + +M + + PN TY L+
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG-- 298
Query: 630 RYGSLHEVQQCLAVYQDMWK 649
Y S + ++ + V+++M +
Sbjct: 299 -YSSTGQWKEAVRVFKEMRR 317
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE 310
+P+ Y +I G C G +K++ + ++ + + L+I +F+S++N N L ++
Sbjct: 461 APDKYAYHCLIQ--GFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN-NLCKLGRVMD 517
Query: 311 ---VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
++ +G+ Y++L+ CL G A ++ + + G+ DV Y
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF---DAMVSAGIEPNDV-VYG 573
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+V + L + +ML G+ P+TI ++ +I+ AG A F EM ++
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFR 457
G N +I+L+ + FD A LF+
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 53/318 (16%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ + M K G ++ +YN L+ A A ++ E++ + + D TY T+
Sbjct: 398 KLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEP----DRVTYCTL 453
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A + +A+ + + M AG++P+T T+S +IN AG + A LF EM++ GC
Sbjct: 454 IDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGC 513
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN NI++ +A ++ A +L+ D Q+
Sbjct: 514 VPNLVTYNIMIALQAKARNYEMALKLYH----------------------------DMQN 545
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
F+P TY+I+M+A C +++ EM+ P+
Sbjct: 546 A-------------------GFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPD 586
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+ +L+D G +GNVE A + + M G+ P+V + + +R RL A++L +
Sbjct: 587 EPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQ 646
Query: 608 EMKHYQIQPNLVTYITLL 625
M ++P+L TY LL
Sbjct: 647 SMVALGLRPSLQTYTLLL 664
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 30/346 (8%)
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQ-----EIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ G A+ A YN+ N +L Q G L + + D TY+T+V
Sbjct: 326 RWGPTAEKALYNLNFSMDAYQANQILKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVG 385
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A+ + K+ E M+ G PN +T++ LI+ A +++A+++F EM + GCEP
Sbjct: 386 ILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEP 445
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ L+ +A D A +++ + Q A G D T + I
Sbjct: 446 DRVTYCTLIDIHAKAGFIDVAMSMYK-----RMQEA-GLSPDTFTYSV----------II 489
Query: 492 NTPNFVPN---SHYSSFDK-RFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLS 545
N N +H+ + P TYNI+ ++A +Y L ++M+ G
Sbjct: 490 NCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQ 549
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++I+++A G G +E A + M++ PD Y + + ++ +++A
Sbjct: 550 PDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEW 609
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ M + + PN+ T +LL A R LH + + Q M G
Sbjct: 610 YQAMLNAGLLPNVPTCNSLLSAFLR---LHRLPDAYNLVQSMVALG 652
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 51/285 (17%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK-SRAIYEDL 282
+ V G+ R S + + K PN+ +I G C +Y+K + ++ ++
Sbjct: 380 YTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYG-CANYLKEALNVFNEM 438
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ + + +L++++A + + +YK MQ+ G+ D +Y++++ AGN
Sbjct: 439 QEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNL 498
Query: 341 VLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ E V+H G + ++ TY+ ++ + A A+ ++MALK+ DM +AG P+ +
Sbjct: 499 AAAHWLFCEMVEH----GCVP-NLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKV 553
Query: 400 TWSSLINACANAGLVEQAMHLFEE-----------------------------------M 424
T+S ++ A + G +E+A +F E M
Sbjct: 554 TYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAM 613
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALG 469
L AG PN CN LL A F R RL ++ L ++ VALG
Sbjct: 614 LNAGLLPNVPTCNSLLSA------FLRLHRLPDAYNLVQSMVALG 652
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K + A+ Y ++ SP+ + II+ G G+ + ++ +
Sbjct: 448 VTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCE 507
Query: 282 LRSQNVTLNIYVFNSL--MNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ N+ +N + + A + + L++Y +MQ G D +Y+I+++A G
Sbjct: 508 MVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGY 567
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML+AG+ PN
Sbjct: 568 LEEAESVFVE---MQQKNWVP-DEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVP 623
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA 446
T +SL++A + A +L + M+ G P+ Q +LL C EA
Sbjct: 624 TCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLSCCTEA 670
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 178/421 (42%), Gaps = 33/421 (7%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
AL D + P + T+++ G+C G + + + + N + +
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVN--GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+NV + +E+ + M++ + D Y+I++ C G+ A ++ E +E
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE---MEI 291
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
KG K D+ TY+T++ F +A W K+ DM+ ++PN +T+S LI++ G +
Sbjct: 292 KG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+A L +EM+Q G PN+ N L+ F + RL + + ++ G D D
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDG------FCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK---PTTTTYNILMKACCTD--YY 530
T I + I + + S + T TYN L++ C
Sbjct: 405 TFNILINGYCKANRIDDGLELF---------REMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
K L EM + + P+ +S+ IL+D +G +E AL+I + + M D+ Y I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+ ++ A+ LF + ++ + Y ++ R SL + +++ M +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD---ILFRKMTEE 572
Query: 651 G 651
G
Sbjct: 573 G 573
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 154/375 (41%), Gaps = 23/375 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ + + S+ + +IY + ++N L + + KLG D +N LL
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
CL A E+ + + K L T +T+V A+ + + M+ G
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTL----ITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
PN +T+ ++N +G AM L +M + + ++ +I++ + D AF
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF + + + Y+ N D + KR P
Sbjct: 285 LFNEMEIKGFKADIIT-YNTLIGGFCNAGRWDDGA----------KLLRDMIKR-KISPN 332
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+++L+ + + +A L+ EM G++PN I++ LID +E A+Q++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+M G PD++ + I ++ R+ LF EM + N VTY TL++ + G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 633 SLHEVQQCLAVYQDM 647
L ++ ++Q+M
Sbjct: 453 KLEVAKK---LFQEM 464
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 216/510 (42%), Gaps = 84/510 (16%)
Query: 109 SMLSLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDS 168
++++L + +G+ + G++ V ++ ++ E G P E+ G ++ C+ S
Sbjct: 192 TLITLNTLVNGLCLN---GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM---CK----S 241
Query: 169 GEVEMFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKP---DVNLAIRYACIVPRADIL-- 223
G+ + + L+ +EE + + + I LC + NL +ADI+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 224 ------FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
FCN G+ D LR D K+ +S PN+ +ID G ++
Sbjct: 302 NTLIGGFCNA----GRWDDGAKLLR--DMIKRKIS-PNVVTFSVLIDSFVKEGKLREADQ 354
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++ + + N +NSL++ + L+ +++ M G D+ ++NIL+ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A E++ + + +GV+ + TY+T+V+ F + ++A K+ ++M+S V
Sbjct: 415 KANRIDDGLELF---REMSLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ +++ L++ + G +E+A+ +F ++ ++ E + I++ A + D A+ L
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F S L ++ D R
Sbjct: 531 FCSLPLKGVKL---------------------------------------DAR------- 544
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YNI++ C KA L +M G +P+ +++ ILI A G + A ++++
Sbjct: 545 -AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
M+ G DV I + + S L ++F
Sbjct: 604 MKSSGFPADVSTVKMVINM-LSSGELDKSF 632
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 172/404 (42%), Gaps = 27/404 (6%)
Query: 247 SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED-LRSQNVTLNIYVFNSLMN--VNAH 303
S + S N + C ++ + ++ I+ D L Q+ N +N+L+ A
Sbjct: 60 SHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAG 119
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D++ ++ M++ G D+ +++ +++A C GN A + + E VL
Sbjct: 120 DMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVL---- 175
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
++ +V A A ++ E+M G+ P+ +T++SLI+ + +E+A L E
Sbjct: 176 --FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLET 233
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
M++ PN N L+ C C A +L S T D IS
Sbjct: 234 MVKRKVRPNLVTYNTLIYGYCKTGCT-GLAHQLIERMIQSGTH----PDVVTFNSLISGF 288
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEM 539
K K I + K+ P TYN+L+ C D R L++EM
Sbjct: 289 CQKSK--IDKACEVL------HLMKKGLCAPNLVTYNVLISGLC-DAGRANEACELLSEM 339
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G+ P+ I++ LI + +E A QI +M E G+ PD ++Y T ++S+R
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+AF+L + M PNL T+ +L+ L E + LAV
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAV 443
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 160/380 (42%), Gaps = 38/380 (10%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D+M++R + D + L + + M A V+ M + G+ A YN +
Sbjct: 132 DHMRARGLAPDAHACTALLTA-LARARMTATAR------RVFDEMARAGLAATTHVYNAM 184
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
L C AG+ A+ I V ++A GV LD F+Y+T++ ++ A+ ++ M
Sbjct: 185 LHVCLKAGDAAQAEAI---VTRMDAAGV-TLDRFSYNTVIALYCRKGMGYEAMCARDRMD 240
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ P+T+TW+S I+ G V++A LF EM+ A P++ L+ A +
Sbjct: 241 KEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVE 300
Query: 451 RAFRLFRSWTLSKTQVALGEDY---------DGNTDRISNMEHKDKQSITNTPNFVPNSH 501
A +L R + + Y DGN + + H+ + N+
Sbjct: 301 EAVKL-RGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTL 359
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCT-DYYRVKALMN----------------EMRTVGL 544
+++ KR +M++ +++ KAL++ +M G
Sbjct: 360 INAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGF 419
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
SPN+ ++ L+D N + L I + + G+ PD Y + I+ R + QA
Sbjct: 420 SPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQR 479
Query: 605 LFEEMKHYQIQPNLVTYITL 624
+F++M+ + + + Y TL
Sbjct: 480 VFDQMQSKGLVGDSLVYATL 499
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 42/284 (14%)
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
S +V V A + A++V + M + G+ P+ ++L+ A A A + A +F+EM +
Sbjct: 112 SWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMAR 171
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSW-----TLSK----TQVAL----GEDYD 473
AG + N +L C++A +A + TL + T +AL G Y+
Sbjct: 172 AGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYE 231
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK 533
R + DK+ I +P T T+N + C + RVK
Sbjct: 232 AMCAR----DRMDKEGI---------------------RPDTVTWNSSIHGLCKEG-RVK 265
Query: 534 ---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
L EM +P+++++T LID +GNVE A+++ M GM P V Y +
Sbjct: 266 EAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAIL 325
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +K+ L EM ++Q + VT TL+ A + G +
Sbjct: 326 RKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDM 369
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 161/347 (46%), Gaps = 33/347 (9%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++++ ++ V+NSL+ + L+V M + G
Sbjct: 263 GLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHP 322
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 323 DIWTYNIVINGLCKMGNISDAAVVMNDAI---VKGYLP-DVFTFNTMIDGYCKRLKLDSA 378
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M G+ P+ IT++S++N AG ++ FEEM+ GC PN+ NIL++
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 443 CVEACQFDRA----FRLFRSW----TLSKTQVALG----EDYDGNTDRISNMEHKDKQSI 490
+ Q + A R+ + T+S + G D DG ++ K +
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 491 TNTPNFVPNSHYSSFDKRFS-----------FKPTTTTYNILMKACC--TDYYRVKALMN 537
+T N + ++ S + + + +KP TY +L+ C + R +
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
EM + G P+ ++ ++++ + V A+ I+ IM G+ P+VV
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 141/341 (41%), Gaps = 37/341 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M + V D+A++N +L A C G+ + + + +V K + ++ FT +
Sbjct: 101 HLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKV----LKRGMSVNKFTCNIW 156
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + + A+ + E M A + P+ +T+++L+ V++A M+ GC
Sbjct: 157 IRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
Query: 430 EPN---------SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
P+ C +LQ E + D F+ F ++ + G +G+ +R
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLK-DAIFKGFVPDRVTYCSLINGLCAEGDVERAL 274
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
+ ++ + KP YN L+K C + AL MNE
Sbjct: 275 ELFNEAQAK--------------------DLKPDLVVYNSLVKGLCRQGLILHALQVMNE 314
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M G P+ ++ I+I+ GN+ A ++ G PDV + T I + +
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
L A L E M Y I P+ +TY ++L + G EV +
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 192/491 (39%), Gaps = 47/491 (9%)
Query: 196 RIVQLCV-NKPDVNLAI------RYACIVPRADILFCNFVREFGKKRDLVSALRAYDASK 248
RI C+ +P V L + R + P A +C VR A +D
Sbjct: 51 RIKSFCITGRPHVALRLLRSLPERGCDVKPLA---YCTVVRGLYAHGHGYDARHLFDEML 107
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLK 306
+ P++ ++ GD M+S A+ + + +++N + N + L+
Sbjct: 108 RRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLE 167
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
+ + ++M + D+ +YN L++ C QE ++ + +G + D FTY
Sbjct: 168 EAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKV---QEAAQYLRRMMNQGCIP-DDFTY 222
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+TI+ + Q A ++ +D + G P+ +T+ SLIN G VE+A+ LF E
Sbjct: 223 NTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQA 282
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-K 485
+P+ N L++ A ++ + Y+ + + M +
Sbjct: 283 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT-YNIVINGLCKMGNIS 341
Query: 486 DKQSITNT-------PN-FVPNSHYSSFDKR---------------FSFKPTTTTYNILM 522
D + N P+ F N+ + KR + P TYN ++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
C V EM G PN I++ ILI+ +E A ++ M +DG+
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PD +++ T I R+ L A+ LF+++ T+ L+ A Y S +Q
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA---YSSKLNMQMA 518
Query: 641 LAVYQDMWKAG 651
++ +M G
Sbjct: 519 EKIFGEMISKG 529
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 144/350 (41%), Gaps = 59/350 (16%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ ++L+N HD +VY M GV D ++ + +K+ C+ G +A + ++
Sbjct: 16 IMDALVNTAYHDQAH--KVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL---LRS 70
Query: 353 LEAKGVLKLDVFTYSTIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L +G + Y T+V+ ++A + A + ++ML V P+ T++++++A
Sbjct: 71 LPERGC-DVKPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLHALCQK 128
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G + ++ L ++L+ G N CNI ++ E + + A VAL E
Sbjct: 129 GDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEA-------------VALVES 175
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D P TYN LM+ C D
Sbjct: 176 MDA-----------------------------------YIAPDVVTYNTLMRGLCKDSKV 200
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A + M G P+ ++ +ID ++ A ++LK G PD V Y +
Sbjct: 201 QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSL 260
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHEVQ 638
I +++A LF E + ++P+LV Y +L++ R G LH +Q
Sbjct: 261 INGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 178/435 (40%), Gaps = 48/435 (11%)
Query: 200 LCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYIC 259
+ VNK N+ IR C E G+ + V+ + + DA +P++
Sbjct: 146 MSVNKFTCNIWIRGLC--------------EGGRLEEAVALVESMDA----YIAPDVVTY 187
Query: 260 RTIIDVCGICGDY-MKSRAIY-EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM 315
T++ G+C D ++ A Y + +Q + + +N++++ L+ E+ K+
Sbjct: 188 NTLMR--GLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDA 245
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
G + D +Y L+ C G+ A E++ E +AK LK D+ Y+++VK
Sbjct: 246 IFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA---QAKD-LKPDLVVYNSLVKGLCR 301
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
AL+V +M+ G P+ T++ +IN G + A + + + G P+
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361
Query: 436 CNILLQACVEACQFDRAFRLF-RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N ++ + + D A +L R W + D ++ + K N
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMW-----MYGIAPDAITYNSVLNGLCKAGKAKEVN-- 414
Query: 495 NFVPNSHYSSFDKRF--SFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHIS 550
+F++ +P TYNIL++ C ++ M GL P+ IS
Sbjct: 415 --------ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTIS 466
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ LI +G+++GA + + + E G S + I ++ A +F EM
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526
Query: 611 HYQIQPNLVTYITLL 625
+P+L TY L+
Sbjct: 527 SKGYKPDLYTYRVLV 541
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F P YN +M A Y +A + M + G++P+ + T+ I + +G
Sbjct: 4 FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L+ + E G +AY T ++ A LF+EM + P++ T+ +L
Sbjct: 64 ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 627 ARSRYGSLHEVQQCLA 642
A + G + E LA
Sbjct: 124 ALCQKGDIMESGALLA 139
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
GC P + N ++ A V D+A +++ + + D +T RI +
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVY----VRMLSAGVAPDARTHTVRIKSF----- 55
Query: 488 QSITNTPNF-------VPN------------------SHYSSFDKRFSFK--------PT 514
IT P+ +P +H +D R F P
Sbjct: 56 -CITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPD 114
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T+N ++ A C D AL+ ++ G+S N + I I G +E A+ +++
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE 174
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M + ++PDVV Y T ++ + ++++A M + P+ TY T++ +
Sbjct: 175 SM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233
Query: 633 SLHEVQQCL 641
L E + L
Sbjct: 234 MLQEATELL 242
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
LK DV Y+ I++ F AL++ E M P + T+ +I+A A AG + +A+
Sbjct: 27 LKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIRKAL 86
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS------KTQVALGEDY 472
+F+ M ++GC P Q N L+ VE Q D+A + L+ +T + + Y
Sbjct: 87 DVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIMDGY 146
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D E Y S K + TY L+KACC R+
Sbjct: 147 ASLGDTGKAFE------------------YFSRIKDEGLELDVYTYEALLKACCKS-GRI 187
Query: 533 K---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ A+ EM + N + ILID +V A +++ MR++G+ PD+ YT+
Sbjct: 188 ESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEGVQPDIHTYTSF 247
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
+ C ++ +++A + +EMK + P L L + SL E + L +++M K
Sbjct: 248 VNACCKAGDMQKAMNTIQEMKRVGLNPMLKP--IPLSYTVGHASLPE--KALKCFEEMKK 303
Query: 650 AG 651
+G
Sbjct: 304 SG 305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L+ N +R F ++ ALR + KK P II G K+ +++
Sbjct: 32 VLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIRKALDVFDM 91
Query: 282 LRSQNVTLNIYVFNSLM----------------------NVNAHDLKFT----------- 308
+R + +N+L+ + ++ +T
Sbjct: 92 MRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIMDGYASLGD 151
Query: 309 ----LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
E + ++ G+ D+ +Y LLKACC +G A + K + AK + + + F
Sbjct: 152 TGKAFEYFSRIKDEGLELDVYTYEALLKACCKSGRIESALAV---TKEMNAKNIPR-NTF 207
Query: 365 TYSTIVKVFA-DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
Y+ ++ +A + W+ A + + M GV P+ T++S +NAC AG +++AM+ +E
Sbjct: 208 VYNILIDGWARRSDVWEAA-DLMQQMRQEGVQPDIHTYTSFVNACCKAGDMQKAMNTIQE 266
Query: 424 MLQAGCEP 431
M + G P
Sbjct: 267 MKRVGLNP 274
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVY 312
++Y ++ C G + A+ +++ ++N+ N +V+N L++ A D+ ++
Sbjct: 170 DVYTYEALLKACCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLM 229
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M++ GV D+ +Y + ACC AG+ A E+K + +LK +Y+
Sbjct: 230 QQMRQEGVQPDIHTYTSFVNACCKAGDMQKAMNTIQEMKRVGLNPMLKPIPLSYTV---- 285
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ-----AMH-LFEEMLQ 426
A + ALK E+M +G+ P+ + L+ + + V + +H + EEM++
Sbjct: 286 -GHASLPEKALKCFEEMKKSGLKPDKAVYHCLMTSLLSRATVAEDYIITGIHRVCEEMVE 344
Query: 427 AG 428
+G
Sbjct: 345 SG 346
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP YN +++A C + R ++ +M+ P ++ +I A +G +
Sbjct: 24 RDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIR 83
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL + +MR G P V Y I V +++ +A + +EM I+PN TY T++
Sbjct: 84 KALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIM 143
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
Y SL + + + + G
Sbjct: 144 DG---YASLGDTGKAFEYFSRIKDEG 166
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ A+ ++ GL P+ + + +I A G GN++ AL+I++ M+++ P +
Sbjct: 11 DWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFM 70
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
I ++ +++A +F+ M+ P + TY L+
Sbjct: 71 PIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALI 108
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A I + + DG+ PDVV Y I+ + +A + E+MK + +P T++ ++
Sbjct: 15 AFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIH 74
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
A ++ G+ +++ L V+ M ++G
Sbjct: 75 AFAKAGA---IRKALDVFDMMRRSG 96
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 34/312 (10%)
Query: 350 VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACA 409
+K++ KG K V + + +++ + AK ++ A V M ++G P+ +T+ ++ +
Sbjct: 165 LKYMNKKG-YKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFV 223
Query: 410 NAGLVEQAMHLFEEML---QAGCEPNSQCCNILLQACVEACQFDRAFRLF-----RSWTL 461
++A +FE++L +A +P+ + ++++ +A + +A +LF R L
Sbjct: 224 EGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPL 283
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
S ++ N +S++ Y +R + KP +Y++L
Sbjct: 284 STVTFNSLMSFETNYKEVSSI-------------------YDQM-QRTALKPDVVSYSLL 323
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+KA +AL EM G+ P S+ ILIDA SG VE A + K MR +
Sbjct: 324 IKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRV 383
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PD+ +YTT + V + + A F +K ++PN+V Y TL++ Y L+ V++
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKG---YSKLNNVER 440
Query: 640 CLAVYQDMWKAG 651
+ VY+ M G
Sbjct: 441 VMRVYERMRMQG 452
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 126/334 (37%), Gaps = 89/334 (26%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P+ + +I + GDY ++R ++ + + + L+ FNSLM+ + K +Y
Sbjct: 248 PDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFET-NYKEVSSIYD 306
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
MQ+ + D+ SY++L+KA YG+ + E
Sbjct: 307 QMQRTALKPDVVSYSLLIKA-------------YGKARREEE------------------ 335
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
AL V E+ML AGV P +++ LI+A A +GLVE+A +F+ M + EP+
Sbjct: 336 --------ALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDL 387
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
++ A V A D A + FR RI
Sbjct: 388 CSYTTMVLAYVNASDMDGAEKFFR--------------------RI-------------- 413
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISW 551
K KP Y LMK + RV + MR G+ PN +
Sbjct: 414 -------------KEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
T ++D G + + A+ K M G D A
Sbjct: 461 TTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKA 494
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 157/398 (39%), Gaps = 61/398 (15%)
Query: 220 ADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY 279
+++ F V +GK D A R K P++ +++ G Y K+ A++
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 280 EDLRSQN-----VTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+++ VT I + + + + + E N ++ D +++++
Sbjct: 201 RRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMY 260
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
AG+ A++++ + + +G+ L T+++++ + ++ + + M +
Sbjct: 261 KKAGDYAQARKLFAQ---MSERGI-PLSTVTFNSLMSFETN---YKEVSSIYDQMQRTAL 313
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +++S LI A A E+A+ +FEEML AG P + NIL+ A + + A
Sbjct: 314 KPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHT 373
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+F++ +R +P
Sbjct: 374 VFKAM-----------------------------------------------RRHRVEPD 386
Query: 515 TTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+Y ++ A +D + ++ GL PN + + L+ NVE +++ +
Sbjct: 387 LCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
MR G+ P+ YTT + V R+ A F+EM+
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEME 484
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F N + F VS++ YD ++ P++ +I G ++
Sbjct: 281 IPLSTVTF-NSLMSFETNYKEVSSI--YDQMQRTALKPDVVSYSLLIKAYGKARREEEAL 337
Query: 277 AIYEDL---------RSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASY 327
A++E++ +S N+ ++ + + L+ AH V+K M++ V D+ SY
Sbjct: 338 AVFEEMLDAGVRPTRKSYNILIDAFAISGLVE-EAHT------VFKAMRRHRVEPDLCSY 390
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
++ A A + A++ + +K + LK +V Y T++K ++ + ++V E
Sbjct: 391 TTMVLAYVNASDMDGAEKFFRRIK----EDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
M GV PN ++++++ A+ F+EM G + + NILL
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILL 499
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ + + +L+ A G G+ A ++LK M + G P V++ T ++ R+K+ ++A ++F
Sbjct: 141 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVF 200
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
M+ +P+ VTY +L++ + + ++ A+++D+
Sbjct: 201 RRMQTSGPEPSAVTYQIILKS---FVEGDKYKEAEAIFEDL 238
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 528 DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
D+ R + ++ M G P+ IS T L++A G + A + + M+ G P V Y
Sbjct: 157 DFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQ 216
Query: 588 TAIKVCVRSKRLKQAFSLFEEM---KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+K V + K+A ++FE++ K +P+ + ++ + G + ++ A
Sbjct: 217 IILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFA 274
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 43/398 (10%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C GD ++ ++ + +++ + +I V+NSL+ + L+V M + G
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
D+ +YNI++ C GN A + + KG L DVFT++T++ + A
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLP-DVFTFNTLIDGYCKRLKLDSA 452
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
L++ E M G+ P+TIT++S++N AG V + F+EM+ GC PN NIL++
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 512
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI-TNTPNFVPNSH 501
+ + + A SK V + ++ H D S T F N
Sbjct: 513 FCRSNKMEEA---------SKVIVKMSQE----------GLHPDAVSFNTLIYGFCRNGD 553
Query: 502 ----YSSFDK--RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTI 553
Y F K + T T+N L+ A + + + + +EM + G + ++ +
Sbjct: 554 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 613
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LID + NV+ A L M + G P + + I + R+ QA + M
Sbjct: 614 LIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ P +V T+L A + E+ + +D+ K G
Sbjct: 674 VVPEVVD--TILNADKK-----EIAAPKILVEDLMKKG 704
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 204/487 (41%), Gaps = 41/487 (8%)
Query: 195 FRIVQLCVN-KPDVNLAIRYACIVP-RADILFCNFVREFGKKRDLVSALRAYDASKKHLS 252
R+ C+ +P ++A+R +P R + +C V A + +D
Sbjct: 128 IRLRSFCLTARP--HIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV 185
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
PN+ ++ GD +++ + + + +++N++ +N + A L +
Sbjct: 186 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 245
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ V D+ +YN L++ C + QE ++ + +G L D FTY+TI+
Sbjct: 246 LVDGMRAYAV-PDVVTYNTLIRGLC---KKSMPQEAMHYLRRMMNQGCLP-DDFTYNTII 300
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ Q A ++ +D + G P+ +T+ SLIN G VE+A+ LF E G +
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH-KDKQS 489
P+ N L++ A ++ + + Y+ + + M + D
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI-QTYNIVINGLCKMGNISDATV 419
Query: 490 ITNT-------PN-FVPNSHYSSFDKR---------------FSFKPTTTTYNILMKACC 526
+ N P+ F N+ + KR + P T TYN ++ C
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 479
Query: 527 T--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
V EM G PN I++ ILI+ S +E A +++ M ++G+ PD V
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 539
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
++ T I R+ L+ A+ LF++++ T+ TL+ A S ++H ++ ++
Sbjct: 540 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK---IF 596
Query: 645 QDMWKAG 651
+M G
Sbjct: 597 DEMLSKG 603
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 169/431 (39%), Gaps = 98/431 (22%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA--------------- 337
+ ++L++ HD +VY M GV D+ ++ I L++ CL
Sbjct: 94 IMDALVDAAYHDQAH--KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH 151
Query: 338 ----------------GNTVLAQEIYGEVKH-----------------------LEAKGV 358
G+T A++++ ++ H LEA +
Sbjct: 152 RGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLL 211
Query: 359 L--------KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
L +++FTY+ ++ +A A+++ + M + V P+ +T+++LI
Sbjct: 212 LGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCK 270
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA------CVEACQF--DRAFRLFRSWTLS 462
+ ++AMH M+ GC P+ N ++ EA + D F+ F ++
Sbjct: 271 KSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT 330
Query: 463 KTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
+ G +G+ +R + ++ + KP YN L+
Sbjct: 331 YCSLINGLCAEGDVERALELFNEAQAK--------------------GIKPDIVVYNSLV 370
Query: 523 KACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
K C + AL MNEM G P+ ++ I+I+ GN+ A ++ G
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
PDV + T I + +L A L E M Y I P+ +TY ++L + G ++EV +
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE- 489
Query: 641 LAVYQDMWKAG 651
+Q+M G
Sbjct: 490 --TFQEMILKG 498
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 509 FSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ P YN +M A Y +A + M G+SP+ + TI + + +
Sbjct: 82 FACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHI 141
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
AL++L+ + G VAY T + A LF++M H + PNL + +L
Sbjct: 142 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 197
Query: 627 ARSRYGSLHE 636
A + G + E
Sbjct: 198 ALCKRGDVLE 207
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMAS 326
CG Y R ++E L V ++ +N+++ + + E+Y MQ+ G+M + +
Sbjct: 393 CGSYKDCRQVFEKL----VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 327 YNILLKACCLAGNTVLAQEIY-------------------------GEVK--HLEAKGVL 359
Y ILL AC +EI+ G +K L ++
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMV 508
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
+ D+ +++ ++ A + AL V +DM AG+ PN +T++S++NAC++ ++
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 420 LFEEMLQAGCEPNSQCCNILLQ------ACVEACQ-FDRAFR----LFRSWTLSKTQVAL 468
+ +++++AG ++ N L+ + +A Q FDR + + + L
Sbjct: 569 IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNL 628
Query: 469 GEDYDGNTDRISNMEHK-DKQSITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYNI 520
G++ DR+ K DK + N N NS + K + T+ N
Sbjct: 629 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNA 688
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ A C + + ++M + N ISW +I C G + LQ+ + M+ +G
Sbjct: 689 LVSTYAKCGSFSDALLVFDKM----MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG 744
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ PD+V + + + C + L++ F M + + I P + Y ++ R G L EV
Sbjct: 745 IKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEV 804
Query: 638 Q 638
+
Sbjct: 805 E 805
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 170/404 (42%), Gaps = 47/404 (11%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK 317
+ I+++ CG ++R +++ + +++V + + ++ F E+++ MQ+
Sbjct: 281 VANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAF--EIFQKMQQ 338
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH---LEAKGVLKLDVFTYSTIVKVFA 374
GV+ + +Y +L A +G L +G+ H L A L V T +VK++A
Sbjct: 339 EGVVPNRITYINVLNA--FSGPAALK---WGKTVHSHILNAGHESDLAVGT--ALVKMYA 391
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ +V E + V + I W+++I A G E+A ++ +M + G PN
Sbjct: 392 KCGSYKDCRQVFEKL----VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 435 CCNILLQACVE--ACQFDRA-----------FRLFRSWTLSKTQVALGEDYDGNTDRISN 481
ILL ACV A + R F + L G D +
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL-LFNK 506
Query: 482 MEHKDKQSITNTPNFVPNSHYSS-----FD--KRFSFKPTTTTYNILMKACCT----DYY 530
M KD S T + S + F ++ KP TY ++ AC + D+
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
R + ++ GL+ + L++ G+V+ A Q+ M + D+VAY I
Sbjct: 567 R--RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ----RDIVAYNAMI 620
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
K+A LF+ ++ ++P+ VTYI +L A + GSL
Sbjct: 621 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 177/425 (41%), Gaps = 45/425 (10%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+DLV+ ++ +H + + Y +I++ CG ++R ++ L T++ +
Sbjct: 155 KDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNA 214
Query: 295 NSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ V ++ L++ + MQ+ G+ A+ LL +C +EI H+E
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI-----HVE 269
Query: 355 A-KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
A K L DV + I+ ++A A +V + M T + ++W+ +I A+ G
Sbjct: 270 AMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM----ETKSVVSWTIIIGGYADCGH 325
Query: 414 VEQAMHLFEEMLQAGCEPNS-QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
E A +F++M Q G PN N+L AF + KT
Sbjct: 326 SEIAFEIFQKMQQEGVVPNRITYINVL-----------NAFSGPAALKWGKTV------- 367
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT----TYNILMKACCT- 527
I N H+ ++ + S D R F+ +N ++
Sbjct: 368 ---HSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 528 -DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
++ + ++M+ G+ PN I++ IL++AC + +I + +DG D+
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
I + R +K A LF +M ++ +++++ ++ ++ G E LAV+QD
Sbjct: 485 NALISMYARCGSIKDARLLFNKM----VRKDIISWTAMIGGLAKSGLGAEA---LAVFQD 537
Query: 647 MWKAG 651
M +AG
Sbjct: 538 MQQAG 542
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/363 (17%), Positives = 137/363 (37%), Gaps = 61/363 (16%)
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
Y + RS+ L+ + + + D ++V + +Q+ G + Y +LK C
Sbjct: 98 YFNGRSKANKLHSHTYKDERTITGKDR--AMDVVQYLQQQGARVNSCDYMKMLKRCIEVK 155
Query: 339 NTVLAQEIYGEV-KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ V +E++ + +H LD +T + ++ ++ + A +V + T
Sbjct: 156 DLVAGREVHEHIIQHCTV-----LDQYTVNALINMYIQCGSIEEARQVWNKL---NHTER 207
Query: 398 TI-TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
T+ +W++++ G +E+A+ L EM Q G LL +C
Sbjct: 208 TVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCK------------ 255
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
S + + G + H + R F
Sbjct: 256 -----SPSALECGREI----------------------------HVEAMKARLLFDVNVA 282
Query: 517 TYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ M A C + + + ++M T + +SWTI+I G+ E A +I + M++
Sbjct: 283 NCILNMYAKCGSIHEAREVFDKMETKSV----VSWTIIIGGYADCGHSEIAFEIFQKMQQ 338
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+G+ P+ + Y + LK ++ + + + +L L++ ++ GS +
Sbjct: 339 EGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKD 398
Query: 637 VQQ 639
+Q
Sbjct: 399 CRQ 401
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 169/395 (42%), Gaps = 33/395 (8%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKL---GVM 321
G+C G + + +E + T++I+ + ++++ A + K + M+K+ G
Sbjct: 139 GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ-DAVALMEKITANGCT 197
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+A+YN LL C G +E ++ + G DV TY++++ K
Sbjct: 198 PTIATYNALLNGLCKMGRL---EEAIDLLRKIVDNGCTP-DVVTYTSLIDGLGKEKRSFE 253
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A K+ ++M G+ +T+ +++LI AG + QA +++ M GC P+ + ++
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313
Query: 442 ACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
+A + A R+F+S L+ +V Y + D
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVV----YSALIHGLCKARKMD----------CA 359
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILID 556
+ K F P T TYNIL+ C D +A +EM G P+ ++ IL+
Sbjct: 360 LEMLAQMKKAFC-TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVS 418
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
+GN + A + M SP+VV Y T I + ++L +A F+ MK P
Sbjct: 419 GFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPP 478
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ Y +L+ + G L C+ ++ +M ++G
Sbjct: 479 DSFVYSSLVDGLCKSGKLE--GGCM-LFDEMERSG 510
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 45/375 (12%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQK-LGVMADMASYNILLKACCLAGN 339
D+ + NV + Y A + + V + M++ GV + ++N++L C +G
Sbjct: 93 DVETWNVLITGYCL-------AREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145
Query: 340 TVLAQEIYGEVKHLEAKGV--LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+ A + H E +D+ TY+ IV A K Q A+ + E + + G TP
Sbjct: 146 VLAAMD------HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++L+N G +E+A+ L +++ GC P+ L+ + + A++LF+
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-------- 501
T+ T + G G + S++ +K S P+ V S
Sbjct: 260 EMALRGLVLDTVCYTALIRGLLQAGKIPQASSV-YKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 502 ---------YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ S + R P Y+ L+ C AL + +M+ +P+ I+
Sbjct: 319 GRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID SG+VE A M E G PDV Y + ++ A +F++M
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS 437
Query: 611 HYQIQPNLVTYITLL 625
PN+VTY TL+
Sbjct: 438 SSHCSPNVVTYGTLI 452
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 152/362 (41%), Gaps = 56/362 (15%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P++ ++ID G ++ +++++ + + L+ + +L+ + A +
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
VYK M G + D+ + + ++ C AG A I+ K +EA+G+ +V YS ++
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF---KSMEARGLAPNEV-VYSALI 347
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A+ AL++ M A TP+TIT++ LI+ +G VE A F+EML+AGC+
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NIL+ +A GNTD + D S
Sbjct: 408 PDVYTYNILVSGFCKA---------------------------GNTDAACGV-FDDMSSS 439
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNH 548
+PN V TY L+ C KA + M+ G P+
Sbjct: 440 HCSPNVV-------------------TYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
++ L+D SG +EG + M G++ +C ++ R+ +A SLF
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC-KANRVDEAVSLFNA 539
Query: 609 MK 610
++
Sbjct: 540 IR 541
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 17/276 (6%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
V T + ++ VFA K + A + ++ L+ P+ TW+ LI A E+A +
Sbjct: 59 VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118
Query: 423 EMLQA-GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM + G P+ + N++L ++ + A F + T + + + Y D ++
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDI-HTYTAIVDWLAK 177
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRT 541
K + ++ N PT TYN L+ C R++ ++ +R
Sbjct: 178 -NKKIQDAVALMEKITANG----------CTPTIATYNALLNGLC-KMGRLEEAIDLLRK 225
Query: 542 V---GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G +P+ +++T LID G A ++ K M G+ D V YT I+ +++ +
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ QA S+++ M P++VT T++ + G +
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 164/421 (38%), Gaps = 85/421 (20%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + LAK+ ++++ ++E + + G A+ +L +G+ K GR++ +
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKIT-ANGCTPTIATYNAL---LNGLCKM---GRLEEAI 220
Query: 134 GVLKKLNELGVAP-----LELFDGSG--------FKLLKNECQRLLDSGEVEMFVGLMEV 180
+L+K+ + G P L DG G +KL K R L V + +
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280
Query: 181 LEEFRLPVKELDEEFRIVQLCVNKPDV----------------NLAIR-YACIVPRA--- 220
L+ ++P + Q CV PDV A+R + + R
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 221 -DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRA 277
++++ + K R + AL KK +P+ +ID G+C GD +RA
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID--GLCKSGDVEAARA 396
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+++ M + G D+ +YNIL+ C A
Sbjct: 397 FFDE---------------------------------MLEAGCKPDVYTYNILVSGFCKA 423
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GNT A ++ ++ +V TY T++ + A + M G P+
Sbjct: 424 GNTDAACGVFDDMSSSHCSP----NVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ +SSL++ +G +E LF+EM ++G NSQ L+ +A + D A LF
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFN 538
Query: 458 S 458
+
Sbjct: 539 A 539
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 510 SFKPTTTTYNILMKACC--TDYYRVKALMNEMRT-VGLSPNHISWTILIDACGGSGNVEG 566
+F P T+N+L+ C + A++ EM G++P+ + +++ SG V
Sbjct: 89 TFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLA 148
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ + +G + D+ YT + ++K+++ A +L E++ P + TY LL
Sbjct: 149 AMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLN 208
Query: 627 ARSRYGSLHE 636
+ G L E
Sbjct: 209 GLCKMGRLEE 218
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 35/325 (10%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTI 369
+ M +LG ++ SYN LLK C + A+E E+ H+ A G ++ ++ +Y+T+
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFC---DENRAEEAL-ELLHMMADGQVRSCPPNLVSYNTV 210
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A + DM G+ PN +T++ +I+ A +V++A +F++M+ G
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN L+ + Q+ R+ + + A G + D T + K
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMS------AHGLEPDCFTYGLLLDYLCKKGK 324
Query: 490 ITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV----- 542
T FD R KP + Y I++ Y K ++EM +
Sbjct: 325 CTEARKL--------FDSMIRKGIKPDVSIYGIILHG-----YATKGALSEMHSFLDLMV 371
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G+SPNH + I+ A + A+ I MR+ G+SP+VV Y T I + R+
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLL 625
A F +M + + PN+V + +L+
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLV 456
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 174/427 (40%), Gaps = 38/427 (8%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN+ T+I+ G K+ ++ D+ Q + N+ + +++ A + V
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQ--EIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M GV ++ +Y C + G + Q E+ +K + A G L+ D FTY +
Sbjct: 262 FQQMIDKGVRPNIVTY-----TCLIHGYLSIGQWKEVVRMLKEMSAHG-LEPDCFTYGLL 315
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M+ G+ P+ + +++ A G + + + M+ G
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG--NTDRISNMEH 484
PN NI+ A + A +F R LS V D R+ + E
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435
Query: 485 KDKQSITN--TPNFVPNSHY----SSFDK------------RFSFKPTTTTYNILMKACC 526
K Q I PN V + + DK P +N +M C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495
Query: 527 TDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
T+ +KA L++ M VG P+ IS+ LI G + A ++L IM G+ P+
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVY 644
Y T + R R+ A+S+F+EM I P +VTY T+L + E ++ +Y
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE---LY 612
Query: 645 QDMWKAG 651
+M +G
Sbjct: 613 LNMITSG 619
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 161/408 (39%), Gaps = 55/408 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I+FC F KK + A+ ++ ++ SPN+ T+ID G + +
Sbjct: 383 NIVFC----AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
+ ++ V NI VF SL+ + E++ M G+ ++ +N ++ C G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+ AQ + + +E G + D+ +Y+ +++ A K+ + MLS G+ PN
Sbjct: 499 RVMKAQRL---IDLMERVGT-RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNE 554
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
T+++L++ G ++ A +F+EML G P N +L + +F A L+
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL- 613
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
NM KQ T N + N
Sbjct: 614 ----------------------NMITSGKQWSIYTYNIILNG------------------ 633
Query: 519 NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L K C D + + + L + I++ I+I A G E A+ + + +G
Sbjct: 634 --LSKNNCVD--EALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
+ PDV Y + + L++ +F EM+ PN + L+R
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVR 737
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 121/328 (36%), Gaps = 56/328 (17%)
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
V D+ +Y+IL+ C G +G + G DV + ++K DAK
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILK---TGWRVNDVVVVNRLLKGLCDAKRV 146
Query: 380 QMALKVK-EDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA---GCEPNSQC 435
A+ V M G TPN +++++L+ + E+A+ L M C PN
Sbjct: 147 GEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVS 206
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPN 495
N ++ Q D+A+ LF T Q I
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMT--------------------------DQGI----- 235
Query: 496 FVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVKALMNEMRTVGLSPNHISWTI 553
P TY I++ C R + + +M G+ PN +++T
Sbjct: 236 ----------------PPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTC 279
Query: 554 LIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
LI G + +++LK M G+ PD Y + + + +A LF+ M
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCL 641
I+P++ Y +L + G+L E+ L
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFL 367
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/428 (18%), Positives = 178/428 (41%), Gaps = 33/428 (7%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK A + +D+ + P++ I I+ G + + + + ++ N Y
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380
Query: 293 VFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FN + A + ++++ M++ G+ ++ +Y L+ A C G A+ + ++
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ +GV ++ ++++V W+ A ++ +M++ G+ PN + +++++
Sbjct: 441 IN---EGVAP-NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G V +A L + M + G P+ N L++ + D A +L + L
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLL--------DIMLSV 548
Query: 471 DYDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKAC 525
N + + H +D + + YS F + S P TYN ++
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRI---------DDAYSVFQEMLSNGITPVVVTYNTILHGL 599
Query: 526 --CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ K L M T G + ++ I+++ + V+ AL++ + + + D+
Sbjct: 600 FKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
+ + I ++ R + A +LF + + P++ TY + GSL E +
Sbjct: 660 ITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFD---GM 716
Query: 644 YQDMWKAG 651
+ +M K+G
Sbjct: 717 FSEMEKSG 724
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Query: 204 KPDV---NLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICR 260
+PD+ N IR C+V + D E K D++ ++ PN
Sbjct: 516 RPDIISYNALIRGHCLVGKTD--------EASKLLDIMLSVGL---------KPNECTYN 558
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNMQ 316
T++ G C G + ++++++ S +T + +N++++ +F+ E+Y NM
Sbjct: 559 TLLH--GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMI 616
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADA 376
G + +YNI+L L+ N + E + L +K L++D+ T++ ++
Sbjct: 617 TSGKQWSIYTYNIILNG--LSKNNCV-DEALKMFQSLCSKD-LQVDIITFNIMIGALLKD 672
Query: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
+ A+ + + + G+ P+ T+ + G +E+ +F EM ++GC PNS
Sbjct: 673 GRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLML 732
Query: 437 NILLQACVEACQFDRA 452
N L++ + RA
Sbjct: 733 NFLVRRLLLRGDISRA 748
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 188/457 (41%), Gaps = 44/457 (9%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
F + + + L AL+ ++ PN+ IC T IDV K+ E ++
Sbjct: 248 FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 307
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ N+ +N ++ + H ++ +E+ +M G + D SY ++ C V
Sbjct: 308 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIV 367
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
E+ +K + + L D TY+T++ + AL +D G + + +
Sbjct: 368 ---EVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRL----- 455
S++++A G + +A L EML G C P+ ++ + D+A +L
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484
Query: 456 ---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-------HYSSF 505
++ T+S T + G G + +E ++ +++ + PNS H
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKS-----LEAREMMNMSEEQWWSPNSITYSVLMHGLRK 539
Query: 506 DKRFS-------------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
+ + S F P N+L+++ C D + + M E G + N ++
Sbjct: 540 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 599
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T +I + ++ AL +L M DV YTT + + R+ +A L ++M
Sbjct: 600 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKML 659
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
H I P VTY T++ RY + +V +A+ + M
Sbjct: 660 HKGIDPTPVTYRTVIH---RYCQMEKVDDLVAILEKM 693
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G + AL++L +M+ G+ P+++ T I V VR+ RL++A E M+ I PN+VT
Sbjct: 258 AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVT 317
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
Y ++R Y LH V++ + + DM G
Sbjct: 318 YNCMIRG---YCDLHRVEEAIELLDDMPSKG 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 22/289 (7%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y ++++V + K Q A +V M G+ + ++ + + AG + A+ +
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVALGEDYDGNTDR 478
M +AG EPN CN + V A + ++A R + V G D
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALM 536
H+ +++I + +P+ P +Y +M C + V+ LM
Sbjct: 329 -----HRVEEAIELLDD-MPSK---------GCLPDKVSYYTIMGYLCKEKRIVEVRDLM 373
Query: 537 NEM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+M + GL + +++ LI + + AL LK E G D V Y+ + +
Sbjct: 374 KKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCK 433
Query: 596 SKRLKQAFSLFEEM-KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
R+ +A L EM P++VTY ++ R G + + ++ L +
Sbjct: 434 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQI 482
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 14/279 (5%)
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ A + ALKV M AGV PN + ++ I+ A +E+A+ E M G PN
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N +++ + + + A L ++ L + T I K+K+ I
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMP---SKGCLPDKVSYYT--IMGYLCKEKR-IVE 368
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ + K TYN L+ + +AL + + G + +
Sbjct: 369 VRDLM-----KKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVG 423
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGM-SPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++ ++ A G + A ++ M G PDVV YT + R + +A L + M
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM 483
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
+ +PN V+Y LL R G E ++ + + ++ W
Sbjct: 484 HTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQW 522
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 171/385 (44%), Gaps = 66/385 (17%)
Query: 277 AIYED--LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL- 331
A+ ED LR + VFN++M V A +F ++ M+ + D+ S+N L+
Sbjct: 205 ALAEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 332 ---KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
K+ CLA L E+ EV+ + L+ D TY+T++ + A+ V E+
Sbjct: 265 ARAKSGCLAAGVAL--ELLHEVR----QAGLRPDAITYNTLISACSQGSNLDDAVAVFEE 318
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M+++ P+ T++++++ G ++A +F+E+++ G +P++ N LL A +
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAK--- 375
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKR 508
+G+ +R+ + + ++
Sbjct: 376 ------------------------EGDVERVERVCEELVKA------------------- 392
Query: 509 FSFKPTTTTYN--ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F+ TYN I M L +EMR +G +P+ +++T+L+D+ G +
Sbjct: 393 -GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 451
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + G+ P +V ++ I +S R A F+ M ++P+ + Y+ +L
Sbjct: 452 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 511
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+R E ++ + +Y+ M K G
Sbjct: 512 VFARS---DETRKLMVLYRAMIKDG 533
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 165/396 (41%), Gaps = 60/396 (15%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD----LKFTLEVYK 313
+ ++ V G + +R + + +R Q++ ++ FN+L+N A LE+
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
+++ G+ D +YN L+ AC N A ++ E+ E + D++TY+ +V V
Sbjct: 283 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP----DLWTYNAMVSVH 338
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
Q A + ++++ G P+ +T++SL+ A A G VE+ + EE+++AG +
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT 493
N ++ + + D A L+ + ++I T
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLY----------------------------DEMRAIGCT 430
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISW 551
P+ V TY +L+ + ++ EM GL P +++
Sbjct: 431 PDAV-------------------TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTF 471
Query: 552 TILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKH 611
+ LI A SG + A + M E G+ PD +AY + V RS ++ L+ M
Sbjct: 472 SALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIK 531
Query: 612 YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
+P+ Y LL A ++ E++ V QDM
Sbjct: 532 DGYKPDDGLYQVLLAALAKGNEHDEIE---GVIQDM 564
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 146/331 (44%), Gaps = 34/331 (10%)
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT-YST 368
+V+ +MQ LG++ + + CC G A ++ + A+ + L++ +
Sbjct: 698 QVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDA----ARSDISLNILSCRVA 753
Query: 369 IVKVFADAKWWQMALK-VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ + K WQ A VK +GV + W++LI+A A +GL E A +F+ M++
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKK 811
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-----LSKTQVALG-EDYDGNTDRISN 481
G P + N +++A + + D + + + +SK+ V L E + D
Sbjct: 812 GPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEV 871
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEM 539
M+ + ++PN H Y I++ C + + V+ ++ EM
Sbjct: 872 MKIYNG---MKAAGYLPNMH---------------LYRIMISLLCHNKRFRDVELMVAEM 913
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
G P+ + L+ G+GN + +++ + E G+ PD Y T I + R+ R
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
++ F+L EM + P L +Y LL A +
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGK 1004
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 35/375 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R A + P A I + + + +L A+ ++ P+++ ++ V G CG
Sbjct: 284 VRQAGLRPDA-ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYN 328
++ ++++L + + +NSL+ A D++ V + + K G D +YN
Sbjct: 343 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 402
Query: 329 ILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKED 388
++ G LA +Y E++ + D TY+ +V A KV E+
Sbjct: 403 TMIHMYGKMGRLDLALGLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEE 458
Query: 389 MLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
M AG+ P +T+S+LI A A +G + A F+ M+++G +P+ ++L + +
Sbjct: 459 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 518
Query: 449 FDRAFRLFRSWTLSK-------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ L+R+ QV L GN EH + + + V
Sbjct: 519 TRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN-------EHDEIEGVIQDMEAV---- 567
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
F P + +IL+KA C + +L+ G P+ S ++DA
Sbjct: 568 -------FEMNPLVIS-SILIKAECIS--QGASLLKRACLQGYEPDGKSLLSILDAYEKM 617
Query: 562 GNVEGALQILKIMRE 576
G E L +L+ +R+
Sbjct: 618 GKHEKGLSLLEWIRQ 632
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 168/390 (43%), Gaps = 30/390 (7%)
Query: 249 KHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT 308
K S + I +I G Y +RAI++ + + + N +M D +
Sbjct: 775 KQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLD 834
Query: 309 LEVY---KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
E+Y + +Q L + ++ ++L+A AG+ +IY +K A G L ++
Sbjct: 835 -ELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMK---AAGYLP-NMHL 889
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y ++ + K ++ + +M AG P+ + ++L+ G ++ + ++ +L
Sbjct: 890 YRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSIL 949
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN---- 481
+AG EP+ N L+ + R FR +TL +G+ G T ++ +
Sbjct: 950 EAGLEPDEDTYNTLI------VMYSRNFRPEEGFTL---LYEMGKR--GLTPKLESYKIL 998
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEM 539
+ K + + + + ++ + Y+++MK ++ + + L++ M
Sbjct: 999 LAASGKAKLWEQADLLFEEMRTK-----GYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 1053
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ G+ P + IL+ + G SG+ + A ++L ++ + + Y+T + +R++
Sbjct: 1054 KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDY 1113
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ EMK ++P+ + + +RA S
Sbjct: 1114 SLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 139/313 (44%), Gaps = 20/313 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
A D+ +++Y M+ G + +M Y I++ C + +++ V +E G K
Sbjct: 864 KAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLC---HNKRFRDVELMVAEMEGAG-FK 919
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ +T++ ++ + ++V +L AG+ P+ T+++LI + E+ L
Sbjct: 920 PDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTL 979
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
EM + G P + ILL A +A +++A LF E+ R++
Sbjct: 980 LYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLF-------------EEMRTKGYRLN 1026
Query: 481 -NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
++ H + N N H S K +PT T +ILM + T + +A ++N
Sbjct: 1027 RSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLN 1086
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+++ L + + ++ ++DA + + + L M+ DG+ PD +T+ I+ +
Sbjct: 1087 SLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCE 1146
Query: 598 RLKQAFSLFEEMK 610
+ A L + ++
Sbjct: 1147 QTDDAILLLKSLQ 1159
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 159/394 (40%), Gaps = 29/394 (7%)
Query: 245 DASKKHLSSPNMYICR-TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH 303
DA++ +S N+ CR +I+ G + ++ + L+ Q ++ ++N+L++ A
Sbjct: 737 DAARSDISL-NILSCRVAMIEAYGKLKLWQQAENFVKGLK-QESGVDRRIWNALIHAYAE 794
Query: 304 D--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ ++ M K G + + S N +++A + G E+Y V+ L+ + K+
Sbjct: 795 SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRL---DELYVVVQELQDLDI-KI 850
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
T +++ FA A +K+ M +AG PN + +I+ + +
Sbjct: 851 SKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMV 910
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
EM AG +P+ N LL FDR ++ S + L D D I
Sbjct: 911 AEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSIL----EAGLEPDEDTYNTLI-- 964
Query: 482 MEHKDKQSITNTPNFVPNSHYS---SFDKRFSFKPTTTTYNILMKACCTD--YYRVKALM 536
+ + NF P ++ KR P +Y IL+ A + + L
Sbjct: 965 --------VMYSRNFRPEEGFTLLYEMGKR-GLTPKLESYKILLAASGKAKLWEQADLLF 1015
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EMRT G N + +++ + N A +L M+EDG+ P + + S
Sbjct: 1016 EEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTS 1075
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+A + +K ++ + + Y T+L A R
Sbjct: 1076 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLR 1109
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 136/319 (42%), Gaps = 16/319 (5%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF-TLEVY-KNMQKLG 319
+++ GD + IY +++ N++++ ++++ H+ +F +E+ M+ G
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
D+ N LL GN E+Y + LEA L+ D TY+T++ +++
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSI--LEAG--LEPDEDTYNTLIVMYSRNFRP 973
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ + +M G+TP ++ L+ A A L EQA LFEEM G N +++
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 1033
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++ A +A L + + + + T ++ + + + N+
Sbjct: 1034 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNS------ 1087
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
S + S P +T + ++ DY + EM+ G+ P+H WT I A
Sbjct: 1088 --LKSSNLEISTLPYSTVLDAYLRN--RDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143
Query: 560 GSGNVEGALQILKIMREDG 578
+ A+ +LK +++ G
Sbjct: 1144 LCEQTDDAILLLKSLQDCG 1162
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
Y+ K+ L+ P + + ++ G + ++ ++E++R++ LN +++ +M + N
Sbjct: 981 YEMGKRGLT-PKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRN 1039
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + + M++ G+ +A+ +IL+ + +G+ A+++ +K L++
Sbjct: 1040 ARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLK----SSNLEI 1095
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
YST++ + + + + + +M GV P+ W+S I A A L EQ
Sbjct: 1096 STLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA---ASLCEQTDD-- 1150
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLS 462
ILL ++ C FD RL T S
Sbjct: 1151 ---------------AILLLKSLQDCGFDLPIRLLTERTSS 1176
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 54/302 (17%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN ++ A A A +++ E +E G + D TY T++ + A A + ++A+ +
Sbjct: 401 TYNRIIHAYGRANYLREAVKVFEE---MEEAG-YEPDRVTYCTLIDIHAKAGYLEVAMDL 456
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
M G++P+T T+S+++N G + A LF EM++ GC PN NI++ +
Sbjct: 457 YGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAK 516
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF 505
A +D +L+R QVA
Sbjct: 517 ARNYDNVVKLYRD-----MQVA-------------------------------------- 533
Query: 506 DKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
F+P TY+I+M+ C +A+ EMR +P+ + +L+D G +GN
Sbjct: 534 ----GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDLWGKAGN 588
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
V+ AL M +DG+ P+V + + ++ R + A+S+ + M + P+L TY
Sbjct: 589 VDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTL 648
Query: 624 LL 625
LL
Sbjct: 649 LL 650
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 53/294 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K V TY+ I+ + A + + A+KV E+M AG P+ +T+ +LI+ A AG +E AM
Sbjct: 396 KPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMD 455
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
L+ M + G P++ + ++ + Q A++LF + I
Sbjct: 456 LYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLF-------------------CEMI 496
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMN 537
N TPN V TYNI+ ++A +Y V L
Sbjct: 497 EN---------GCTPNLV-------------------TYNIIIALQAKARNYDNVVKLYR 528
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M+ G P+ I+++I+++ G G+++ A + MR D +PD Y + + ++
Sbjct: 529 DMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD-WAPDEPVYGLLVDLWGKAG 587
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +A + M +QPN+ T +LL A + ++ Q +V Q+M G
Sbjct: 588 NVDKALGWYHAMLQDGLQPNVPTCNSLLSA---FLKINRFQDAYSVLQNMLAQG 638
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 139/330 (42%), Gaps = 33/330 (10%)
Query: 261 TIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
T+I + G + R + ++ + +N +++ A+ L+ ++V++ M++
Sbjct: 369 TMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEA 428
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D +Y L+ AG +A ++YG ++ + L D FTYS +V
Sbjct: 429 GYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVG----LSPDTFTYSAMVNCLGKGGQ 484
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ +M+ G TPN +T++ +I A A + + L+ +M AG P+ +I
Sbjct: 485 LAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSI 544
Query: 439 LLQACVEACQFDRAFRLF----RSWTLSKTQVALGEDY---DGNTDRISNMEHKDKQSIT 491
+++ D A +F R W + L D GN D+ H Q
Sbjct: 545 VMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGL 604
Query: 492 NTPNFVP--NSHYSSFDKRFSFK---------------PTTTTYNILMKACCTDYYRVKA 534
PN VP NS S+F K F+ P+ TY +L+ +CCTD +
Sbjct: 605 Q-PN-VPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL-SCCTDAHAQMG 661
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
L ++ + P H+ L DA G NV
Sbjct: 662 LCCQLMAITGHPAHMFLLYLPDAEPGGENV 691
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TT IL +A + ++ L++EM P +++ +I A G + + A+++ + M
Sbjct: 368 TTMIGILGQA--RQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 425
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
E G PD V Y T I + ++ L+ A L+ M+ + P+ TY ++ + G L
Sbjct: 426 EEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQL 485
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T +I G + +L M D P VV Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
++A +FEEM+ +P+ VTY TL+ ++ G L
Sbjct: 416 REAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYL 450
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R+ G D YTT I + ++++ +L EM + +P +VTY ++ A YG
Sbjct: 354 LKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHA---YG 410
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ +++ + V+++M +AG
Sbjct: 411 RANYLREAVKVFEEMEEAG 429
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 187/442 (42%), Gaps = 40/442 (9%)
Query: 226 NFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQ 285
N V KK ++ SA + KK +P++++ +I+ G ++ +++ ++ +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 286 NVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
+ N ++ L++ L L M ++G+ A + Y+ L+ C G A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ E + A G LK +V Y++++ + A ++ +M G++PNT T+++
Sbjct: 445 KSLFDE---MIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK 463
LI+ +A + +A LF EM++ PN N+L++ + RAF L + K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE-MVEK 559
Query: 464 TQVALGEDYDG------NTDRIS------NMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
V Y +T R+S N ++Q + +PN
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN------------ 607
Query: 512 KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
TY L+ C KA L EM PN ++ +D GN+E A+Q
Sbjct: 608 ---VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ ++ E G + V Y I+ + R+++A + M I P+ ++Y T++
Sbjct: 665 LHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723
Query: 630 RYGSLHEVQQCLAVYQDMWKAG 651
R G L E + +++ M G
Sbjct: 724 RRGDLKEA---IKLWESMLNRG 742
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 154/371 (41%), Gaps = 42/371 (11%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ S + ++YV+ +++ D EV M+ G +A+YN+ ++ C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
N + + + E+K+L + L+ DV TY T+V + ++ ++ +M+ G
Sbjct: 262 --KNQRVWEAV--EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ S+L++ G + A L ++ + G P+ N L+ + + + D A L
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS-----------HYSS 504
F +NM HK T + + +S H+
Sbjct: 378 F-----------------------NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 505 FDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSG 562
K T Y+ L+ C K+L +EM GL PN + +T LI G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+ A ++ M G+SP+ +T I + R+ +A LF EM + + PN VTY
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 623 TLLRARSRYGS 633
L+ + G+
Sbjct: 535 VLIEGHCKEGN 545
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/564 (21%), Positives = 221/564 (39%), Gaps = 140/564 (24%)
Query: 74 YADMASKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIREGRIDCVV 133
Y + + + KDG+L+E ES+ + G+ F + ++ ++ K G++D +
Sbjct: 358 YNALINSMCKDGKLDE----AESLFNNMGHKGLFPNDVTYSILIDSFCK---RGKLDVAL 410
Query: 134 GVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDE 193
L K+ E+G+ S L+ C+ L + R K L +
Sbjct: 411 HFLGKMTEVGIKATVYPYSS---LISGHCK-----------------LGKLR-AAKSLFD 449
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSS 253
E L KP+V +++ + + + K+ +L +A R Y S
Sbjct: 450 EMIANGL---KPNV--------------VIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN Y +I G+C +A+ + +++
Sbjct: 493 PNTYTFTALIS--GLC-------------------------------HANRMAEANKLFG 519
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVF 373
M + V+ + +YN+L++ C GNTV A E+ E + KG++ D +TY ++
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE---MVEKGLVP-DTYTYRPLISGL 575
Query: 374 ------ADAKWWQMALKVKEDMLS--AGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
++A+ + L+ ++ L+ G PN +T+++LIN GL+++A L EML
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK 485
+ PN L ++A +L L E + N
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQL---------HDVLLEGFLAN---------- 676
Query: 486 DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
T TYNIL++ C ++ M G
Sbjct: 677 -----------------------------TVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+SP+ IS++ +I G+++ A+++ + M G++PD VAY I C + L +AF
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767
Query: 604 SLFEEMKHYQIQPNLVTYITLLRA 627
L ++M ++PN TY +L+
Sbjct: 768 ELRDDMMRRGVKPNRATYNSLIHG 791
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 28/312 (8%)
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T S ++ + ++MAL + ++++S+G+ P+ +++++ + +A + M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241
Query: 425 LQAGCEPNSQCCNILL------QACVEACQFDR--AFRLFRSWTLSKTQVALG----EDY 472
+GC+ + N+ + Q EA + +++ R+ + + LG E++
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 473 DGNTDRISNM-EHKDKQSITNTPNFVPNSHY-----SSFD-----KRFSFKPTTTTYNIL 521
+ + ++ M E S N V S+FD K+F P+ YN L
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ + C D ++L N M GL PN ++++ILID+ G ++ AL L M E G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
V Y++ I + +L+ A SLF+EM ++PN+V Y +L+ + G LH
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA-- 479
Query: 640 CLAVYQDMWKAG 651
+Y +M G
Sbjct: 480 -FRLYHEMTGKG 490
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 171/418 (40%), Gaps = 66/418 (15%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
SA+R +D K + P I T++ + G K+ ++E+++ + +Y + L+
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 299 NV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
A ++ ++YKNM G+ D+ N L+ G ++ E+
Sbjct: 311 KGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCT 370
Query: 357 GVLKLDVFTYSTIVKVFADAK--------WWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
V +Y+T++K ++K W+ K+K D GV+P+ T+S LI+
Sbjct: 371 PT----VVSYNTVIKALFESKAPVSEVSSWFD---KMKAD----GVSPSEFTYSILIDGY 419
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVAL 468
VE+A+ L EEM + G P L+ A +A +++ A LF+ L
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE---------L 470
Query: 469 GEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
E++ + R+ Y+ K F C
Sbjct: 471 KENFGNVSSRV----------------------YAVMIKHF--------------GKCGK 494
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
L NEM+ G P+ ++ L+ +G V A +L+ M E+G + D+ ++
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNI 554
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
+ R+ ++A +FE MKH I+P+ VTY TLL + G E + + +D
Sbjct: 555 ILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKD 612
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 198/472 (41%), Gaps = 57/472 (12%)
Query: 188 VKELDEEF-RIVQLCVNKPDVNLAI---------RYACIVPRADI---LFCNFVREFGKK 234
V+ LDE F RIV++ PD A+ R + D+ + F + GK+
Sbjct: 60 VRMLDERFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKR 119
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
R+ Y A + L +Y G+ R I E +R+ V++ V
Sbjct: 120 RNFQHDCSTYMALIRCLEEARLY------------GEMY--RTIQEVVRNTYVSVGPVVL 165
Query: 295 NSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+ L+ A + L V+ + ++YN ++ G E+Y E+ +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+G D TYS ++ + A+++ ++M + P +++L+ G
Sbjct: 226 ---EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALG 469
VE+A+ LFEEM +AGC P L++ +A + + A+ L+++ L+ V L
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLN 342
Query: 470 EDYD--GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC- 526
+ G R+ + +TN N + + PT +YN ++KA
Sbjct: 343 NLMNILGKVGRL--------EELTNVFNEMGT---------WRCTPTVVSYNTVIKALFE 385
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
V + ++M+ G+SP+ +++ILID + VE AL +L+ M E G P
Sbjct: 386 SKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
AY + I ++KR + A LF+E+K + Y +++ + G L E
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 147/341 (43%), Gaps = 30/341 (8%)
Query: 310 EVYKNMQKLG-VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
EVY M G D +Y+ L+ + G A ++ E+K + K+ Y+T
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI----YTT 273
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ ++ + AL + E+M AG +P T++ LI AG VE+A L++ ML G
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDG 333
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR---SWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ N L+ + + + +F +W + T V+ NT + E K
Sbjct: 334 LTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSY------NTVIKALFESK 387
Query: 486 DKQSITNTPNFVPNSHYSS-FDKRFS--FKPTTTTYNILMKACCTDYYRVKALM--NEMR 540
P S SS FDK + P+ TY+IL+ C KAL+ EM
Sbjct: 388 -----------APVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P ++ LI+A G + E A ++ K ++E+ + Y IK + +L
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+A LF EMK+ P++ Y L+ + G ++E L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLL 537
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +C+ + GK + +A + K++ + + + +I G CG ++
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ ++++Q ++Y +N+LM+ V A + + + M++ G AD+ S+NI+L
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFA 560
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A E++ +KH +K D TY+T++ FA A ++ A ++ +M G
Sbjct: 561 RTGVPRRAIEMFETMKHCG----IKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFE 616
Query: 396 PNTITWSSLINACAN 410
+ IT+SS+++A N
Sbjct: 617 YDAITYSSILDAVGN 631
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 150/373 (40%), Gaps = 33/373 (8%)
Query: 215 CIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMK 274
C+ P I + + + K + AL ++ K+ SP +Y +I G G +
Sbjct: 263 CMQPTEKI-YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEE 321
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
+ +Y+++ + +T ++ N+LMN+ L+ V+ M + SYN ++K
Sbjct: 322 AYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIK 381
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
A L + E+ ++A GV + FTYS ++ + + AL + E+M
Sbjct: 382 A--LFESKAPVSEVSSWFDKMKADGVSPSE-FTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G P + SLINA A E A LF+E+ + +S+ ++++ + + A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 453 FRLFRSW-------------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNF--- 496
LF L V G + N+ + ME + N+ N
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANS-LLRKMEENGCTADINSHNIILN 557
Query: 497 ------VPNSHYSSFD--KRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
VP F+ K KP TYN L+ A + LM EM+ G
Sbjct: 558 GFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEY 617
Query: 547 NHISWTILIDACG 559
+ I+++ ++DA G
Sbjct: 618 DAITYSSILDAVG 630
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 512 KPTTTTYN--ILMKACCTDYYRVKALMNEMRTVG-LSPNHISWTILIDACGGSGNVEGAL 568
KPT++TYN ILM + +V + EM G P+ I+++ LI + G + A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
++ M+++ M P YTT + + + ++++A LFEEMK P + TY L++
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G V++ +Y++M G
Sbjct: 314 GKAG---RVEEAYDLYKNMLTDG 333
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 149/303 (49%), Gaps = 33/303 (10%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K + TY+T+V K + L + + G+ P+TI ++++INA + +G ++QAM
Sbjct: 351 KPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASSESGNLDQAMK 410
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE+M ++GC+P + N L++ + + + + RL ++ L ++ DR
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL--------EMMLRDEMLQPNDRT 462
Query: 480 SNMEHK---DKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA------CCT--D 528
N+ + +++ I N V + F KP T+N L +A CT D
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKM------QSFGVKPDAVTFNTLARAYSRIGSTCTAED 516
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ L N+++ PN + +++ G +E AL+ M+E G+ P++ + +
Sbjct: 517 MIIPRMLHNKVK-----PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMW 648
IK + + + + M+ + ++P++VT+ TL+ A + S+ ++++C +Y+DM
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA---WSSVGDMKRCEEIYRDML 628
Query: 649 KAG 651
+ G
Sbjct: 629 EGG 631
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 70/417 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I + V +++ S L +K+ P+ + II+ G+ ++ I+E
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM-----ASYNILLKACCL 336
++ FN+L + + LE + ++ + +M + NIL++A C
Sbjct: 415 MKESGCKPTASTFNTL--IKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWC- 471
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-----LS 391
N +E + V +++ GV K D T++T+ + ++ + EDM L
Sbjct: 472 --NQRKIEEAWNIVYKMQSFGV-KPDAVTFNTLARAYSRIG----STCTAEDMIIPRMLH 524
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
V PN T +++N G +E+A+ F M + G PN N L++ +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI----- 579
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
D DG + + ME F
Sbjct: 580 ------------------NDMDGVGEVVDLMEE------------------------FGV 597
Query: 512 KPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
KP T++ LM A + D R + + +M G+ P+ +++IL +G E A Q
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK-HYQIQPNLVTYITLL 625
IL MR+ G+ P+VV YT I + +K+A ++ +M+ + PNL TY TL+
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLI 714
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ C TI++ G C G ++ + ++ V N++VFNSL+ +N +D+
Sbjct: 529 PNVRTCGTIVN--GYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M++ GV D+ +++ L+ A G+ +EIY ++ +G + D+ +S +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDM----LEGGIDPDIHAFSIL 642
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA-G 428
K +A A + A ++ M GV PN + ++ +I+ +AG +++AM ++ +M + G
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVG 702
Query: 429 CEPNSQCCNILLQACVEACQ 448
PN L+ EA Q
Sbjct: 703 LSPNLTTYETLIWGFGEAKQ 722
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 150/380 (39%), Gaps = 59/380 (15%)
Query: 219 RAD-ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
R D ILF + + +L A++ ++ K+ P T+I G G +S
Sbjct: 386 RPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 278 IYED-LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ E LR + + N N L+ N ++ + MQ GV D ++N L +A
Sbjct: 446 LLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAY 505
Query: 335 CLAGNTVLAQE-IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G+T A++ I + H + +K +V T TIV + + + AL+ M G
Sbjct: 506 SRIGSTCTAEDMIIPRMLHNK----VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V PN ++SLI N ++ + + M + G +P+ + L+ A R
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
++R + +G D P
Sbjct: 622 EIYR------------DMLEGGID-----------------------------------P 634
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
++IL K A + + + ++N+MR G+ PN + +T +I +G ++ A+Q+
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Query: 572 KIMRED-GMSPDVVAYTTAI 590
MR G+SP++ Y T I
Sbjct: 695 NKMRGSVGLSPNLTTYETLI 714
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
++ N + G P+ I++T L+ A + L ++ ++++G+ PD + + I
Sbjct: 340 SIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINAS 399
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
S L QA +FE+MK +P T+ TL++ + G L E + L
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+F + ++ F D+ D ++ P++ T+++ GD + IY D
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRD 626
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + +I+ F+ L A + + ++ M+K GV ++ Y ++ C AG
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE 686
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
A ++Y +++ L ++ TY T++ F +AK
Sbjct: 687 MKKAMQVYNKMRGSVG---LSPNLTTYETLIWGFGEAK 721
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
S T L++ G + A I + E+G P ++ YTT + R K SL ++
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++P+ + + ++ A S G+L Q + +++ M ++G
Sbjct: 381 QKNGLRPDTILFNAIINASSESGNL---DQAMKIFEKMKESG 419
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 182/432 (42%), Gaps = 45/432 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP+ T+++ G ++RA+ ++ V +N+L++ A +K +
Sbjct: 236 SPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATK 295
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V + M G D+ +YN+L C AG A + E++ L G L DV TY+T+
Sbjct: 296 VVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERL---GTLLPDVVTYNTLA 352
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ AL++ E+M GV +T + +I G +E A+ +M G
Sbjct: 353 DACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLA 412
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT------DRISNMEH 484
P+ N L+ A +A +A+ TL V G D T + +
Sbjct: 413 PDVITYNTLIHAHCKAGNIAKAY------TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRY 466
Query: 485 KDKQSITNTP---NFVPN---------SHYSSFDKRFSFK-----------PTTTTYNIL 521
++ Q + +P F+P+ +++ ++ + + P+ +TYN L
Sbjct: 467 EEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526
Query: 522 MKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+K +A+ +NE+ GL P+ ++ I+I A G++E A Q M E+
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSF 586
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
PDVV T + + +L +A LFE + +++TY TL++ + G +V
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG---DVDT 643
Query: 640 CLAVYQDMWKAG 651
L + DM G
Sbjct: 644 ALHFFADMEARG 655
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 154/392 (39%), Gaps = 55/392 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEV 311
P++ T+ D C C + + E++R + V + N ++ D L+ L
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M G+ D+ +YN L+ A C AGN A + E+ + LKLD FT +T++
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM----VRRGLKLDTFTLNTVLY 458
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
K ++ A + + G P+ +++ +++ A E A+ L++EM++ P
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ N L++ + A D+++ + K
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAI-----------------------DKLNELMEK------ 549
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHI 549
P TTYNI++ A C D N+M P+ +
Sbjct: 550 ------------------GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVV 591
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ L++ +G ++ AL++ + E G DV+ Y T I+ + + A F +M
Sbjct: 592 TCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM 651
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +QP+ TY +L A S G E Q L
Sbjct: 652 EARGLQPDAFTYNVVLSALSEAGRTEEAQNML 683
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/414 (19%), Positives = 160/414 (38%), Gaps = 90/414 (21%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLE 310
+P++ T+I G+ K+ + +++ + + L+ + N+++ + ++
Sbjct: 412 APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQG 471
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ ++ + G M D SY ++ A N+ A ++ E+ +E K L + TY+T++
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM--IEKK--LTPSISTYNTLI 527
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
K + + A+ +++ G+ P+ T++ +I+A G +E A +M++ +
Sbjct: 528 KGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFK 587
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ CN L+ + D+A +LF SW V G+ D
Sbjct: 588 PDVVTCNTLMNGLCLNGKLDKALKLFESW------VEKGKKVD----------------- 624
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
TYN L++ C D AL +M GL P+
Sbjct: 625 ------------------------VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDA 660
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDG----------MSPDVV-------------- 584
++ +++ A +G E A +L + E G + P V
Sbjct: 661 FTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEE 720
Query: 585 -----------AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
AYT + S + K+A ++ +EM + + TYITL+
Sbjct: 721 TVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEG 774
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 58/331 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+++++ + +T +I +N+L+ LK ++ + + G++ D +YNI++ A C
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G+ A + + ++ + K DV T +T++ ALK+ E + G
Sbjct: 567 KEGDLENAFQFHNKM----VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKK 622
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ IT+++LI G V+ A+H F +M G +P++ N++L A EA
Sbjct: 623 VDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA--------- 673
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV-PNSHYSSFDKRFSFKPT 514
G T+ NM HK +S T + +F P SS D+ S K
Sbjct: 674 ------------------GRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDA 715
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHIS--WTILIDACGGSGNVEGALQILK 572
T E TV + S +T L++ SG + A IL
Sbjct: 716 KT---------------------EEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILD 754
Query: 573 IMREDGMSPDVVAYTTAIKVCV-RSKRLKQA 602
M + GMS D Y T ++ V R KRL A
Sbjct: 755 EMMQKGMSVDSSTYITLMEGLVKRQKRLTHA 785
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 504 SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTV---GLSPNHISWTILIDACG 559
S +R +P+ N ++ A + +A ++ R++ L PNH ++ +L+
Sbjct: 156 SLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHC 215
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G + AL L M+ G+SPD V Y T + R L +A +L MK + P
Sbjct: 216 SKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRP 275
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TY TL+ A +R G ++Q V + M G
Sbjct: 276 TYNTLVSAYARLG---WIKQATKVVEAMTANG 304
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
+VP D + + + K+ DL +A + ++ ++ P++ C T+++ + G K+
Sbjct: 551 LVPD-DTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKA 609
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
++E + +++ +N+L+ D+ L + +M+ G+ D +YN++L A
Sbjct: 610 LKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
AG T AQ + + L G L F+ + D K +E+ +
Sbjct: 670 LSEAGRTEEAQNM---LHKLAESGTLS-QSFSSPLLKPSSVDEAESGKDAKTEEETVENP 725
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ ++ L+N +G ++A + +EM+Q G +S L++ V+
Sbjct: 726 QDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 173/397 (43%), Gaps = 59/397 (14%)
Query: 237 LVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
L A++ Y+ + + N++I T+ID+ + G++ ++ +Y +L+S
Sbjct: 541 LTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYLNLKSS----------- 589
Query: 297 LMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
GV+ D ++I+++ AG+ +E ++ ++ +
Sbjct: 590 ----------------------GVVLDRIGFSIVVRMYVKAGSL---EEACSVLEIMDEQ 624
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
+ DV+ + +++++ + + +G+ + ++ +IN CA A +++
Sbjct: 625 KDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDE 684
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
FEEM++ G PN+ N+LL +A F + LF L+K G
Sbjct: 685 LSRTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF---LLAKRH--------GVV 733
Query: 477 DRISN----MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
D IS + + TN + + N + F + YN L+ A D
Sbjct: 734 DVISYNTIIAAYGKNKDFTNMSSAIKNMQFDGFS------VSLEAYNTLLDAYGKDKQME 787
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ ++++ M+ P+H ++ I+I+ G G ++ +LK ++E G+ PD+ +Y T I
Sbjct: 788 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGLGPDLCSYNTLI 847
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
K +++A L +EM+ I P+ VTY L+ A
Sbjct: 848 KAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTA 884
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 143/360 (39%), Gaps = 61/360 (16%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLK--ACCLAGNTVLAQEIY 347
N++V N M+VN +K L + YN +LK C N +
Sbjct: 120 NLFVNNGEMDVNYSAIKPGL-------------SLEHYNAILKRLESCSDTNAIKF---- 162
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS-AGVTPNTITWSSLIN 406
+ KG L+ + YS I++V + W A + E++ G + ++++I
Sbjct: 163 --FDWMRCKGKLEGNFGAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIY 220
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL-----QACVEACQFD----RAFRL-- 455
AC G V+ A F+ ML+ G PN +L+ V+ +F R F +
Sbjct: 221 ACTKKGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVC 280
Query: 456 ---FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFK 512
+ S T++ L E + + N+ +D+ + V + YS K
Sbjct: 281 ESAYSSMITIYTRLRLYE----KAEEVINLMKQDRVRLKLENWLVMLNAYSQQGK----- 331
Query: 513 PTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
+ ++++ M G +PN I++ LI G +E A +
Sbjct: 332 ----------------MEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFH 375
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + G+ PD +Y + I+ R+ ++A ++E+K +PN TL+ +++YG
Sbjct: 376 RLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCGYKPNSSNLFTLINLQAKYG 435
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 116/312 (37%), Gaps = 64/312 (20%)
Query: 340 TVLAQEIYGEVK----HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGV 394
TV+ + +GE + +L++ GV+ LD +S +V+++ A + A V E M +
Sbjct: 571 TVMGE--FGEAEKLYLNLKSSGVV-LDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDI 627
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ + ++ L ++ HL+ + ++G + + N ++ C A D R
Sbjct: 628 VPDVYLFRDMLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSR 687
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F R+ F P
Sbjct: 688 TFEEMI-----------------------------------------------RYGFTPN 700
Query: 515 TTTYNILMKACCTDYYRVKALMNEMRTVGLSPNH-----ISWTILIDACGGSGNVEGALQ 569
T T+N+L+ Y + K L+ H IS+ +I A G + +
Sbjct: 701 TVTFNVLLDV----YGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSS 756
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+K M+ DG S + AY T + + K++++ S+ + MK P+ TY ++
Sbjct: 757 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 816
Query: 630 RYGSLHEVQQCL 641
G + EV L
Sbjct: 817 EQGWIDEVAGVL 828
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 163/432 (37%), Gaps = 98/432 (22%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASY 327
Y K+ + ++ V L + N L+ +NA+ + +E V +M+ G ++ +Y
Sbjct: 297 YEKAEEVINLMKQDRVRLKLE--NWLVMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAY 354
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVL---------KLDVFTYSTIVKVFADAKW 378
N L+ YG+V +EA L + D +Y ++++ + A
Sbjct: 355 NTLITG-------------YGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADN 401
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
++ A +++ G PN+ +LIN A G + A+ E+M GC+ S I
Sbjct: 402 YEEANHYYQELKRCGYKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPS-ILGI 460
Query: 439 LLQACVEACQFDRAFRLFRS-----WTLSKTQVA------------------LGEDYDGN 475
+LQA + + D L + L++T + L E +
Sbjct: 461 ILQAYEKVGKIDVVPYLLKGSFHNHIRLNQTSFSILVMAYIKHGMVDDCLALLREKKWRD 520
Query: 476 TDRISNMEH------KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
+ S++ H K+ +T+ +H D+ + T+T +I ++
Sbjct: 521 SAFESHLYHLLICSCKESGQLTDAVKLY--NHTMESDEEINLHITSTMIDIY--TVMGEF 576
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED------------ 577
+ L +++ G+ + I ++I++ +G++E A +L+IM E
Sbjct: 577 GEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRD 636
Query: 578 ------------------------GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
G+ D Y I C R+ L + FEEM Y
Sbjct: 637 MLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMIRYG 696
Query: 614 IQPNLVTYITLL 625
PN VT+ LL
Sbjct: 697 FTPNTVTFNVLL 708
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 84/446 (18%), Positives = 166/446 (37%), Gaps = 48/446 (10%)
Query: 230 EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL 289
E+ + DL+ L + ++ N T+I C G+ + ++ + V
Sbjct: 191 EWNRAEDLIEELCGFQGFQQSFQVFN-----TVIYACTKKGNVKLASKWFQMMLELGVRP 245
Query: 290 NIYVFNSLM-----NVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N+ LM N N + +F + +M+K ++ + A +++ L
Sbjct: 246 NVATIGMLMGLYQKNWNVDEAEFA---FSHMRKFEIVCESAYSSMITIYTRLR-----LY 297
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
E EV +L + ++L + + ++ ++ + A V M +AG PN I +++L
Sbjct: 298 EKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYNTL 357
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------ 458
I +E A LF + G EP+ +++ A ++ A ++
Sbjct: 358 ITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCGY 417
Query: 459 -------WTLSKTQVALGEDYDGNTDRISNMEHKDKQ--SI----------TNTPNFVPN 499
+TL Q G D DG I +M Q SI + VP
Sbjct: 418 KPNSSNLFTLINLQAKYG-DRDGAIKTIEDMTSIGCQYPSILGIILQAYEKVGKIDVVPY 476
Query: 500 SHYSSFDKRFSFKPTTTTYNIL--MKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDA 557
SF T+ + ++ +K D AL+ E + + + +LI +
Sbjct: 477 LLKGSFHNHIRLNQTSFSILVMAYIKHGMVD--DCLALLREKKWRDSAFESHLYHLLICS 534
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
C SG + A+++ E ++ +T I + +A L+ +K + +
Sbjct: 535 CKESGQLTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYLNLKSSGVVLD 594
Query: 618 LVTYITLLRARSRYGSLHEVQQCLAV 643
+ + ++R + GSL E L +
Sbjct: 595 RIGFSIVVRMYVKAGSLEEACSVLEI 620
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,305,497,498
Number of Sequences: 23463169
Number of extensions: 366404440
Number of successful extensions: 1101035
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7946
Number of HSP's successfully gapped in prelim test: 3362
Number of HSP's that attempted gapping in prelim test: 920362
Number of HSP's gapped (non-prelim): 110055
length of query: 651
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 502
effective length of database: 8,863,183,186
effective search space: 4449317959372
effective search space used: 4449317959372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)