BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006303
(651 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYL7|PP361_ARATH Pentatricopeptide repeat-containing protein At5g02830,
chloroplastic OS=Arabidopsis thaliana GN=At5g02830 PE=2
SV=3
Length = 852
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/662 (55%), Positives = 471/662 (71%), Gaps = 18/662 (2%)
Query: 3 VVFGSSSSSSSAIVATQTRLY------NHRNKPNKHPVTKLFP---LASSSSLSSIPTVH 53
+VFGSSS+ ++ R Y N + K N TKL P S S +S+ H
Sbjct: 6 IVFGSSSAITNP-HHHHRRCYATAPESNRKTKSNS-SFTKLLPSLPQQHSPSPASVSATH 63
Query: 54 SSQTALLSTVRRDLSSRNDYYADMASKLAKDGRLEEFAMIVESVVVSEG-NVSKFASMLS 112
S + + VR +YYAD ASKLA+DGR+E+ A+I E++ G NV++FASM+
Sbjct: 64 SLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVD 123
Query: 113 LEMVASGIVKSIREGRIDCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVE 172
++++ GI ++R+G+I+ VV LK++ ++G+APL+L D S KL++ + + + +S +VE
Sbjct: 124 YDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVE 183
Query: 173 MFVGLMEVLEEFRLPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFG 232
+ LME+L +KEL + F +V+ CV + LAIRYAC++P ++L C + FG
Sbjct: 184 KAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFG 243
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
KK D+VS + AY+A K+ L +PNMYICRT+IDVCG+CGDY+KSR IYEDL +N+ NIY
Sbjct: 244 KKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY 303
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V NSLMNVN+HDL +TL+VYKNMQ L V ADM SYNILLK CCLAG LAQ+IY E K
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E+ G+LKLD FTY TI+KVFADAK W+ ALKVK+DM S GVTPNT TWSSLI+ACANAG
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED- 471
LVEQA HLFEEML +GCEPNSQC NILL ACVEACQ+DRAFRLF+SW S +L D
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 472 --YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDY 529
G T + +++ S+ N + NS Y KRF FKPTT TYNIL+KAC TDY
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNS---NSPYIQASKRFCFKPTTATYNILLKACGTDY 540
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
YR K LM+EM+++GLSPN I+W+ LID CGGSG+VEGA++IL+ M G PDVVAYTTA
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTA 600
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWK 649
IK+C +K LK AFSLFEEM+ YQI+PN VTY TLL+ARS+YGSL EV+QCLA+YQDM
Sbjct: 601 IKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRN 660
Query: 650 AG 651
AG
Sbjct: 661 AG 662
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 21/339 (6%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M ++G D+ +YN ++ + C T + + K +E KG+ + +V TY+ +V
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLC---KTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLC 236
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
++ W A ++ DM+ +TPN IT+S+L++A G V +A LFEEM++ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ C DR + + L ++ L + NT + N K K+
Sbjct: 297 TYSSLING---LCLHDRIDEANQMFDLMVSKGCLADVVSYNT--LINGFCKAKRVEDGMK 351
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPNHISWT 552
F S T TYN L++ D + + ++M G+SP+ ++
Sbjct: 352 LFREMSQRG-------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
IL+ +G +E AL I + M++ M D+V YTT I+ ++ ++++A+SLF +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++P++VTY T++ G LHEV+ A+Y M + G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEG 500
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 158/389 (40%), Gaps = 37/389 (9%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++ D+ +I FN L++ V + + K M+ LG+ D+ ++NI++ C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
LA I G++ L + D T ++V F A+ + + M+ G
Sbjct: 132 CCFQVSLALSILGKMLKLGYEP----DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+ + ++++I++ V A F+E+ + G PN L+ + ++ A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 456 FRSWTLSK------TQVALGEDYDGNTDRISNME-HKDKQSITNTPNFVPNSHYSSFDKR 508
K T AL + + N + E ++ ++ P+ V YSS
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT---YSSLING 304
Query: 509 FSFKPTTTTYN-----ILMKACCTDYYRVKALMN----------------EMRTVGLSPN 547
N ++ K C D L+N EM GL N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+++ LI +G+V+ A + M G+SPD+ Y + + L++A +FE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+M+ ++ ++VTY T++R + G + E
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +E G+ + D++T++ ++ F +AL + ML G P+ +T SL+N
Sbjct: 109 KKMEVLGI-RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
V A+ L ++M++ G +P+ N ++ + + + + AF F+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE------------ 215
Query: 471 DYDGNTDRISNMEHKDKQ----SITNTPNFVPNSHYSSFDKRF-------SFKPTTTTYN 519
+E K + + T N + NS S R P TY+
Sbjct: 216 -----------IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
L+ A + K L EM + + P+ ++++ LI+ ++ A Q+ +M
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G DVV+Y T I ++KR++ LF EM + N VTY TL++ + G + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 638 QQCLA------VYQDMW 648
Q+ + + D+W
Sbjct: 385 QEFFSQMDFFGISPDIW 401
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 196/421 (46%), Gaps = 35/421 (8%)
Query: 234 KRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYV 293
KR++ A + + SPN++ +I G+ + +++ + ++ N+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 294 FNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
+N+L++ + ++ ++M G+ ++ SYN+++ C G +E+ +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLT 299
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ +G LD TY+T++K + + AL + +ML G+TP+ IT++SLI++ A
Sbjct: 300 EMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT---LSKTQVAL 468
G + +AM ++M G PN + L+ + + A+R+ R S + V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 469 GEDYDGN------TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRF------------ 509
+G+ D I+ +E ++ + +P+ V S S F + +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 510 ---SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNV 564
KP T TY+ L++ C +A L EM VGL P+ ++T LI+A G++
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E ALQ+ M E G+ PDVV Y+ I + R ++A L ++ + + P+ VTY TL
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 625 L 625
+
Sbjct: 597 I 597
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 35/357 (9%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
++ F V+K M + V ++ +YNIL++ C AGN +A ++ + +E KG L +V
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK---METKGCLP-NV 240
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TY+T++ + + K+ M G+ PN I+++ +IN G +++ + E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGN 475
M + G + N L++ + F +A + ++ T + GN
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSH-YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA 534
+R ME D+ + PN Y++ FS K + YRV
Sbjct: 361 MNRA--MEFLDQMRVRG---LCPNERTYTTLVDGFS-----------QKGYMNEAYRV-- 402
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
+ EM G SP+ +++ LI+ +G +E A+ +L+ M+E G+SPDVV+Y+T +
Sbjct: 403 -LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RS + +A + EM I+P+ +TY +L++ + ++ +Y++M + G
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQG---FCEQRRTKEACDLYEEMLRVG 515
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 316 QKLGVMADMASYNILLKACCLAG-NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
Q G M + SYN +L A + N A+ ++ E+ LE++ + +VFTY+ +++ F
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LESQ--VSPNVFTYNILIRGFC 216
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A +AL + + M + G PN +T+++LI+ ++ L M G EPN
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 435 CCNILLQA-CVEACQFDRAFRLF----RSWTLSK-TQVALGEDY--DGNTDRISNMEHKD 486
N+++ C E + +F L R ++L + T L + Y +GN
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF---------- 326
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGL 544
Q++ + R P+ TY L+ + C + R +++MR GL
Sbjct: 327 HQALVMHAEML----------RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
PN ++T L+D G + A ++L+ M ++G SP VV Y I + +++ A +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ E+MK + P++V+Y T+L R ++V + L V ++M + G
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRS---YDVDEALRVKREMVEKG 480
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 123/586 (20%), Positives = 241/586 (41%), Gaps = 93/586 (15%)
Query: 90 FAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIRE-----------GRIDCVVGVLKK 138
+ ++++ + S+ N+S FA + EM+ S + ++ G ID + + K
Sbjct: 172 YNAVLDATIRSKRNIS-FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 139 LNELGVAPL-----ELFDG--------SGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFR 185
+ G P L DG GFKLL++ + L+ + V + + E R
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 186 LPVKELDEEFRIVQLCVNKPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYD 245
+ +E V +N+ +L ++ + ++ + K+ + AL +
Sbjct: 291 M------KEVSFVLTEMNRRGYSLD----------EVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 246 ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD- 304
+H +P++ ++I G+ ++ + +R + + N + +L++ +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 305 -LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
+ V + M G + +YN L+ C+ G ++ ++ ++ KG L DV
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM---EDAIAVLEDMKEKG-LSPDV 450
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
+YST++ F + AL+VK +M+ G+ P+TIT+SSLI ++A L+EE
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 424 MLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
ML+ G P+ L+ A C+E ++A +L + + D + I+ +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEG-DLEKALQLHNEMV----EKGVLPDVVTYSVLINGL 565
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFK-------PTTTTYNILMKACCTDYYRVKAL 535
+KQS T KR K P+ TY+ L++ C ++
Sbjct: 566 ---NKQSRTREA------------KRLLLKLFYEESVPSDVTYHTLIENCSNIEFK---- 606
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
S LI G + A Q+ + M PD AY I R
Sbjct: 607 --------------SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +++A++L++EM + VT I L++A + G ++E+ +
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 199/494 (40%), Gaps = 64/494 (12%)
Query: 199 QLCVNKPDVNLAIRYACIVPRADILFCNF-----------VREFGKKRDLVSALRAYDAS 247
Q+ N N+ IR C D+ F V + D LR D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 248 KKHLSS-------PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
K L S PN+ +I+ G+C G + + ++ + +L+ +N+L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVIN--GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 299 NVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ F L ++ M + G+ + +Y L+ + C AGN A E +++ +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR---VR 374
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
G+ + TY+T+V F+ + A +V +M G +P+ +T+++LIN G +E
Sbjct: 375 GLCP-NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A+ + E+M + G P+ + +L + D A R+ R + + D +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGIKPDTITYS 489
Query: 477 DRISNM--EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRV 532
I + + K++ + R P TY L+ A C D +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEML----------RVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ-ILKIMREDGMSPDVVAYT---- 587
L NEM G+ P+ +++++LI+ A + +LK+ E+ + DV +T
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 588 ----------TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+ IK + +A +FE M +P+ Y ++ R G ++
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG---DI 656
Query: 638 QQCLAVYQDMWKAG 651
++ +Y++M K+G
Sbjct: 657 RKAYTLYKEMVKSG 670
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 56/417 (13%)
Query: 231 FGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLN 290
G++ L L +D S +++ +I+ G G Y S + + ++++ ++ +
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 291 IYVFNSLMNVNAH---DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +N+++N A D + L ++ M+ G+ D+ +YN LL AC + G L E
Sbjct: 211 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAE 267
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + G++ D+ TYS +V+ F + + + +M S G P+ +++ L+ A
Sbjct: 268 MVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
A +G +++AM +F +M AGC PN+ ++LL ++ ++D +LF S
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS----- 381
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
NTD P TYNIL++
Sbjct: 382 -------NTD-----------------------------------PDAATYNILIEVFGE 399
Query: 528 DYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
Y V L ++M + P+ ++ +I ACG G E A +IL+ M + + P A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
YT I+ ++ ++A F M P++ T+ +LL + +R G + E + L+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 52/463 (11%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKS 275
V R+ + + +G+ ++L D K SP++ T+I+ C G D+
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNVNA-HDLKFTLE-VYKNMQKLGVMADMASYNILLKA 333
++ ++R + + +I +N+L++ A L E V++ M G++ D+ +Y+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV-- 289
Query: 334 CCLAGNTVLAQEIYGEVKHLE---------AKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
E +G+++ LE A G D+ +Y+ +++ +A + + A+
Sbjct: 290 -----------ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
V M +AG TPN T+S L+N +G + LF EM + +P++ NIL++
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 445 EACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME-HKDKQSI---TNTPNFVPNS 500
E F LF + + E Y+G H+D + I + VP+S
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDM-ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 501 H-YSSFDKRF-------------------SFKPTTTTYNILMKACCTD--YYRVKALMNE 538
Y+ + F P+ T++ L+ + +A+++
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ G+ N ++ I+A G E A++ M + PD + V ++
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + FEEMK I P+++ Y +L + +V + L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 54/296 (18%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-GVTPNTITWSSLINACANAGLVEQAM 418
KL + ++ + K FA WQ +L++ + M PN ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+F+EM G + L+ A +++ + L DR
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL--------------------DR 201
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT---DYYRVKAL 535
+ N + P+ TYN ++ AC D+ + L
Sbjct: 202 MKNEK---------------------------ISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
EMR G+ P+ +++ L+ AC G + A + + M + G+ PD+ Y+ ++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+RL++ L EM P++ +Y LL A ++ GS +++ + V+ M AG
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAG 347
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 48/291 (16%)
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K+++ + K + Y+ ++ + L+V ++M S GV+ + ++++LINA
Sbjct: 129 KYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGR 188
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
G E ++ L + M P+ N ++ AC G
Sbjct: 189 NGRYETSLELLDRMKNEKISPSILTYNTVINACARG----------------------GL 226
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
D++G + M H+ Q P TYN L+ AC
Sbjct: 227 DWEGLLGLFAEMRHEGIQ------------------------PDIVTYNTLLSACAIRGL 262
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+A M M G+ P+ +++ L++ G +E +L M G PD+ +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
++ +S +K+A +F +M+ PN TY LL + G +V+Q
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 233/538 (43%), Gaps = 99/538 (18%)
Query: 112 SLEMVASGIVKSIREGRIDCVVGVLKKLNELGVAP--------LELFDGSG-----FKLL 158
SL+ +S +V + ID V+G+LK++ LG+ P + + +G +++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 159 KNECQRLLDSG---EVEMFVGLMEVLEEFRLPVKELD---EEFRIVQLCVNKPDVNLAIR 212
K R+ D G +V + L++ L ++LD E F ++ +KPD +
Sbjct: 282 K----RMDDEGCGPDVVTYTVLIDAL----CTARKLDCAKEVFEKMKTGRHKPD---RVT 330
Query: 213 YACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDY 272
Y ++ R F RDL S + + +K P++ ++D G++
Sbjct: 331 YITLLDR-----------FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 273 MKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++ + +R Q + N++ +N+L+ + H L LE++ NM+ LGV +Y +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 331 LKACCLAGNTVLAQEIYGEVKHLE-AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
+ +G++V A E + ++K A ++ + YS + K D + Q+ +K+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS-LAKAGRDREAKQIFYGLKD-- 496
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
G+ P+++T++ ++ + G +++A+ L EM++ GCEP+ N L+ +A +
Sbjct: 497 --IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
D A+++F K
Sbjct: 555 DEAWKMFMRM-----------------------------------------------KEM 567
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KPT TYN L+ + +A L M G PN I++ L D + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
L++L M + G PDV Y T I V++ ++K+A F +MK + P+ VT TLL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 171/385 (44%), Gaps = 35/385 (9%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ +++ + + N+Y F + V A + E+ K M G D+ +Y +L+ A
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
C A A+E++ ++K G K D TY T++ F+D + + +M G
Sbjct: 304 CTARKLDCAKEVFEKMK----TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P+ +T++ L++A AG +A + M G PN N L+ + + D A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 455 LFRSW------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-TPNFVP-NSHYSSFD 506
LF + + T + + Y + D +S +E +K PN V N+ S
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 507 KRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
K + K + ++ +GL P+ +++ +++ G ++
Sbjct: 480 KAGRDR------------------EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+++L M E+G PDV+ + I ++ R+ +A+ +F MK +++P +VTY TLL
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 627 ARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G ++Q+ + +++ M + G
Sbjct: 582 GLGKNG---KIQEAIELFEGMVQKG 603
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 41/347 (11%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL------------DVFTYSTIVKVF 373
S ++ C G+++L I KH G L + TY+ ++
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 374 ADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
+A ++A V + S G P+ T++ L++A +G +++ L++EM CE N+
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWT----LSKTQVALGEDYDGNTDRISNMEHKDKQS 489
NI++ V+A D A L+ S T G DG + S ++ KQ
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK--SGRLYEAKQL 913
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLS 545
++ +P YNIL+ KA D AL M G+
Sbjct: 914 FEGMLDY-------------GCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVR 958
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++++L+D G V+ L K ++E G++PDVV Y I +S RL++A L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 606 FEEMKHYQ-IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EMK + I P+L TY +L+ G + E + +Y ++ +AG
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAG 1062
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 61/384 (15%)
Query: 275 SRAIYEDL-RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
+R ++E + V + +N L+ + A ++ +V+ ++ G + D+A+YN LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A +G E+Y E+ E + + T++ ++ A AL + D++S
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEA----NTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 392 -AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+P T+ LI+ + +G + +A LFE ML GC PN NIL+ +A + D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS 510
A LF+ K+ +
Sbjct: 944 AACALFKRMV--------------------------KEGV-------------------- 957
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
+P TY++L+ C + L E++ GL+P+ + + ++I+ G S +E AL
Sbjct: 958 -RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 569 QILKIMRED-GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ M+ G++PD+ Y + I + +++A ++ E++ ++PN+ T+ L+R
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
S G + + AVYQ M G
Sbjct: 1077 YSLSG---KPEHAYAVYQTMVTGG 1097
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 25/345 (7%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+ MQK + D +Y + K+ + G L Q Y K E VL + ++Y+ ++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGG--LKQAPYALRKMREFGFVL--NAYSYNGLI 195
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ +++ A++V M+ G P+ T+SSL+ ++ M L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PN I ++ A + + A+ + + G D T I + K
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRM----DDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 491 TNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
F+K + KP TY L+ D VK +EM G P
Sbjct: 312 AK----------EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ +++TIL+DA +GN A L +MR+ G+ P++ Y T I +R RL A LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
M+ ++P TYI + YG + L ++ M G
Sbjct: 422 GNMESLGVKPTAYTYIVFI---DYYGKSGDSVSALETFEKMKTKG 463
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/495 (19%), Positives = 195/495 (39%), Gaps = 82/495 (16%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
F+ +GK D VSAL ++ K +PN+ C + G +++ I+ L+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 287 VTLNIYVFNSLMNVNAH--DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
+ + +N +M + ++ +++ M + G D+ N L+ A A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ +K ++ LK V TY+T++ Q A+++ E M+ G PNTIT+++L
Sbjct: 559 KMFMRMKEMK----LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 405 INA-CANA----------------------------------GLVEQAMHLFEEMLQAGC 429
+ C N G V++AM F +M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW------------------------------ 459
P+ LL V+A + A+++ ++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S+ VA G DG++ + + + K + + + + F K +P TYN
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSG----ARTLFEKFTKDLGVQPKLPTYN 789
Query: 520 ILMKACC-TDYYRV-KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+L+ D + + + ++++ G P+ ++ L+DA G SG ++ ++ K M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE-MKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + + I V++ + A L+ + M P TY L+ S+ G L+E
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 637 VQQCLAVYQDMWKAG 651
+Q +++ M G
Sbjct: 910 AKQ---LFEGMLDYG 921
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 244 YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--N 301
YD SP +ID G +++ ++E + N ++N L+N
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + ++K M K GV D+ +Y++L+ C+ G + E+K + L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK----ESGLNP 994
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDM-LSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV Y+ I+ + + AL + +M S G+TP+ T++SLI AG+VE+A +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+ E+ +AG EPN N L++ + + + A+ ++++
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 227 FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQN 286
+ FGK + +A + K P++ ++D + G + +++L+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 287 VTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ-KLGVMADMASYNILLKACCLAGNTVLA 343
+ ++ +N ++N +H L+ L ++ M+ G+ D+ +YN L+ +AG A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+IY E++ + L+ +VFT++ +++ ++ + + A V + M++ G +PNT T+
Sbjct: 1052 GKIYNEIQ----RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 404 LIN 406
L N
Sbjct: 1108 LPN 1110
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 180/401 (44%), Gaps = 29/401 (7%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKNM 315
I T++D + D K +++ L+ T + + L+N+ K + LEV + M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
++ GV ++ +Y++++ + A ++ ++ K +K DV Y+ I+ F
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM----VKEGMKPDVILYNNIISAFCG 566
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
A++ ++M P T T+ +I+ A +G + +++ +F+ M + GC P
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 436 CNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH---KDKQSITN 492
N L+ VE Q ++A + TL+ +S EH K Q +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAG---------------VSANEHTYTKIMQGYAS 671
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHIS 550
+ Y + + TY L+KACC AL EM + N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+ ILID G+V A +++ M+++G+ PD+ YT+ I C ++ + +A EEM+
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++PN+ TY TL++ +R SL E + L+ Y++M G
Sbjct: 792 ALGVKPNIKTYTTLIKGWAR-ASLPE--KALSCYEEMKAMG 829
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+P + +I++ G K+ + ++ + V N+ ++ ++N V D
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
V+++M K G+ D+ YN ++ A C GN A + E++ L + + T+ I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR----TFMPII 596
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+A + + +L+V + M G P T++ LIN +E+A+ + +EM AG
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG------NTDRI-SNME 483
N ++Q +AF F V + Y+ + R+ S +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF-TYEALLKACCKSGRMQSALA 715
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRT 541
+ S N P R SF YNIL+ D + L+ +M+
Sbjct: 716 VTKEMSARNIP-------------RNSF-----VYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ ++T I AC +G++ A Q ++ M G+ P++ YTT IK R+ ++
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 602 AFSLFEEMKHYQIQPNLVTY---ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
A S +EEMK I+P+ Y +T L +R+ + + + ++M +AG
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 189/461 (40%), Gaps = 65/461 (14%)
Query: 251 LSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA--HDLKFT 308
+S P+ ++ G GD ++R +E +R++ +T ++ SL++ A D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNT---------------VLAQEIYGE---- 349
L + M++ G+ + +Y++++ AG+ L IYG+
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 350 -------------VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
V+ +E +G+ + Y T++ + + L V + + G TP
Sbjct: 424 HCQTCNMERAEALVREMEEEGI-DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+T+ LIN G + +A+ + M + G + N + ++++ V+ + AF +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 457 RSWTLS--KTQVALGEDYD------GNTDRISNMEHKDKQSITNTPN---FVP--NSHYS 503
K V L + GN DR K+ Q + + P F+P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 504 SFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHIS 550
S D R S + PT T+N L+ KA +++EM G+S N +
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+T ++ G+ A + ++ +G+ D+ Y +K C +S R++ A ++ +EM
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
I N Y L+ +R G + E + Q M K G
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 759
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 61/372 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL+ N + F ++ A++ +K P II GD +S +++
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ FN L+N V ++ +E+ M GV A+ +Y +++ G+
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
T A E + L+ +G L +D+FTY ++K + Q AL V ++M + + N+
Sbjct: 675 TGKAFEYF---TRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
++ LI+ A G V +A L ++M + G +P+ + AC +A +RA
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA------- 783
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T I ME KP TY
Sbjct: 784 ----------------TQTIEEME------------------------ALGVKPNIKTYT 803
Query: 520 ILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNV------EGALQIL 571
L+K KAL EM+ +G+ P+ + L+ + ++ G + I
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 863
Query: 572 KIMREDGMSPDV 583
K M E G+ D+
Sbjct: 864 KEMVEAGLIVDM 875
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 93/468 (19%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
L + + F K D AL+ ++ S +II G +++ A++E+L
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 283 RSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
R + +N+L+ V LK + M+K GV D +Y++L+ A AG
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A+ + +K +EA G ++ + F +S ++ F D WQ +V ++M S GV P+
Sbjct: 391 ESARIV---LKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ +I+ ++ AM F+ ML G EP+ N L+ C+ R
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC---HCKHGR--------- 494
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
+ V + + ++R P TTYNI
Sbjct: 495 ----------------------------------HIVAEEMFEAMERRGCL-PCATTYNI 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL------- 571
++ + + +K L+ +M++ G+ PN ++ T L+D G SG A++ L
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 572 ----------------------------KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
++M DG+ P ++A + I +R +AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + MK ++P++VTY TL++A R + + Q+ VY++M +G
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSG 684
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 157/389 (40%), Gaps = 62/389 (15%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+R + I PR + ++ + K L A +K SP+ + +ID G
Sbjct: 330 LRQSGIKPRTRA-YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYN 328
+ +R + +++ + +V N +VF+ L+ + + + T +V K M+ +GV D YN
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 329 I-----------------------------------LLKACCLAGNTVLAQEIYGEVKHL 353
+ L+ C G ++A+E++ + +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF---EAM 505
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E +G L TY+ ++ + D + W ++ M S G+ PN +T ++L++ +G
Sbjct: 506 ERRGCLPCAT-TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVE---ACQFDRAFRLFRSWTLSKTQVALGE 470
A+ EEM G +P+S N L+ A + + Q AFR+ S L + +AL
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTD 528
+ + + +D ++ + K KP TY LMKA
Sbjct: 625 LINAFGE-----DRRDAEAFA----------VLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+ +V + EM G P+ + ++L A
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 518 YNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Y+IL+ A +A L+++ +T L+P +++ LI AC + ++E AL ++ MR+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQA--FSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
DG D V Y+ I+ RS ++ L++E++ +++ ++ ++ ++ G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 635 HEVQQCLAVYQ 645
+ Q L + Q
Sbjct: 286 SKALQLLGMAQ 296
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 28/425 (6%)
Query: 231 FGKKRDLVSALRAYD---ASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
F KK DL ALRA+D K + S + + II + G G + ++ L+
Sbjct: 147 FHKKFDL--ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 288 TLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQE 345
+L++Y + SL++ A+ ++ + V+K M++ G + +YN++L G +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP--WNK 262
Query: 346 IYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLI 405
I V+ +++ G+ D +TY+T++ Q A +V E+M +AG + + +T+++L+
Sbjct: 263 ITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 406 NACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
+ + ++AM + EM+ G P+ N L+ A D A L T+
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMK 523
D T +S E K S S F+ + KP T+N +K
Sbjct: 382 ----PDVFTYTTLLSGFERAGKVE----------SAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 524 ACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ + + +E+ GLSP+ ++W L+ G +G + K M+ G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ + T I R +QA +++ M + P+L TY T+L A +R G + ++ L
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 642 AVYQD 646
A +D
Sbjct: 548 AEMED 552
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 190/406 (46%), Gaps = 27/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--L 309
+ P+++ T++ G + +I+E++R+ NI FN+ + + + KFT +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+++ + G+ D+ ++N LL + G + E+ G K ++ G + + T++T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTL 495
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ ++ A+ V ML AGVTP+ T+++++ A A G+ EQ+ + EM C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+PN LL A + L E Y G + + + K
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAE------------EVYSGVIEPRAVL-LKTLVL 602
Query: 490 ITNTPNFVPNSH--YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ + + +P + +S +R F P TT N ++ KA +++ M+ G +
Sbjct: 603 VCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P+ ++ L+ S + + +IL+ + G+ PD+++Y T I R+ R++ A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F EM++ I P+++TY T + + Y + ++ + V + M K G
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGS---YAADSMFEEAIGVVRYMIKHG 764
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 167/409 (40%), Gaps = 56/409 (13%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
+ + + F A+ + ++ P + I++V G G + K ++ E +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 283 RSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+S + + Y +N+L+ + +V++ M+ G D +YN LL + G +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD---VYGKS 327
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E + + G + TY++++ +A A+++K M G P+ T
Sbjct: 328 HRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ AG VE AM +FEEM AGC+PN C F+ +++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPN-------------ICTFNAFIKMY---- 429
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
GN + + M I + N P T+N
Sbjct: 430 -------------GNRGKFTEM-----MKIFDEINVC------------GLSPDIVTWNT 459
Query: 521 LMKACCTDYY--RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ + V + EM+ G P ++ LI A G+ E A+ + + M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++PD+ Y T + R +Q+ + EM+ + +PN +TY +LL A
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 36/414 (8%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + F + + SA+ ++ + PN+ I + G G + + I++++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 284 SQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
++ +I +N+L+ V N D + + V+K M++ G + + ++N L+ A G+
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
A +Y + + GV D+ TY+T++ A W+ + KV +M PN +T
Sbjct: 506 EQAMTVY---RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC-------QFDRAF 453
+ SL++A AN + L EE+ EP + +LL+ V C + +RAF
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLPEAERAF 617
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S L S + ++ + N V + + K F P
Sbjct: 618 SELKERGFSPDITTLN----------SMVSIYGRRQMVAKANGVLD-----YMKERGFTP 662
Query: 514 TTTTYNILM--KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+ TYN LM + D+ + + ++ E+ G+ P+ IS+ +I A + + A +I
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
MR G+ PDV+ Y T I ++A + M + +PN TY +++
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE--V 311
P + +T++ VC C ++ + +L+ + + +I NS++++ V
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G MA+YN L+ + + ++EI ++ + AKG+ K D+ +Y+T++
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI---LREILAKGI-KPDIISYNTVIY 707
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ + A ++ +M ++G+ P+ IT+++ I + A + E+A+ + M++ GC P
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 432 NSQCCNILLQACVEACQFDRAFRLF 456
N N ++ + + D A +LF
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEA-KLF 791
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 214 ACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYM 273
I PRA +L V K L A RA+ K+ SP++ +++ + G
Sbjct: 588 GVIEPRA-VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILL 331
K+ + + ++ + T ++ +NSLM +++ F + E+ + + G+ D+ SYN ++
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
A C A I+ E+++ G++ DV TY+T + +A ++ A+ V M+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRN---SGIVP-DVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
G PN T++S+++ ++A E++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 201/481 (41%), Gaps = 43/481 (8%)
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRAD------------------ILFCNFVREFGKKR 235
EF V +C N N+ I + C + R I + V + +
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 236 DLVSALRAYDASKKHLSSPNMYICRTIIDV-CGICGDYMKSRAIYEDLRSQNVTLNIYVF 294
+L + + K+ PN YI +II + C IC A E +R Q + + V+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVY 354
Query: 295 NSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
+L++ D++ + + M + D+ +Y ++ C G+ V A +++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE--- 411
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+ KG L+ D T++ ++ + A + A +V M+ AG +PN +T+++LI+ G
Sbjct: 412 MFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
++ A L EM + G +PN N ++ ++ + A +L V E
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----------VGEFEAA 520
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YY 530
N D ++ D + + K +PT T+N+LM C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 531 RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAI 590
+ L+N M G++PN ++ L+ N++ A I K M G+ PD Y +
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 591 KVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
K +++ +K+A+ LF+EMK ++ TY L++ + E ++ V+ M +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQMRRE 695
Query: 651 G 651
G
Sbjct: 696 G 696
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 36/398 (9%)
Query: 274 KSRAIYEDLRSQNVTLNI---YVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
++R ++E + + + L++ V+ + ++ + + + V++ ++GV ++ASYNI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ C G +E + + +E KG DV +YST+V + K+ E M
Sbjct: 253 IHFVCQLGRI---KEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ PN+ + S+I + +A F EM++ G P++ L+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 451 RAFRLF-----RSWT---LSKTQVALGEDYDGNTDRISNMEHK------DKQSITNTPNF 496
A + F R T L+ T + G G+ + H+ + S+T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE-- 426
Query: 497 VPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCT--DYYRVKALMNEMRTVG 543
+ N + + + +F+ P TY L+ C D L++EM +G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L PN ++ +++ SGN+E A++++ G++ D V YTT + +S + +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ +EM +QP +VT+ L+ +G L + ++ L
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 519 NILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
N+ + D Y+ + E VG+ N S+ I+I G ++ A +L +M
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
G +PDV++Y+T + R L + + L E MK ++PN Y +++ R L
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 636 EVQQCLA 642
E ++ +
Sbjct: 334 EAEEAFS 340
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A+ + + E G+ +V +Y I + R+K+A L M+ P++++Y T++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 627 ARSRYGSLHEVQQCLAV 643
R+G L +V + + V
Sbjct: 290 GYCRFGELDKVWKLIEV 306
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 184/458 (40%), Gaps = 88/458 (19%)
Query: 243 AYDASKKHLSSPNM--YICRTIIDVCGICGDYMK--------SRAIYEDLRSQNVTLNIY 292
AY KK + +M Y+ I+ + ICGD + Y ++ + V LN
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNIL-IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+S +A + V + M G + D ++Y+ +L C A LA ++ E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K +G L DV+TY+ +V F A + A K +M G TPN +T+++LI+A
Sbjct: 510 K----RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A V A LFE ML GC PN + L+ +A Q ++A ++F SK
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK------- 618
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
+ P+ + ++ +D S +P TY L+ C +
Sbjct: 619 ---------------------DVPDV--DMYFKQYDDN-SERPNVVTYGALLDGFCKSHR 654
Query: 531 --RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM--------- 579
+ L++ M G PN I + LID G ++ A ++ M E G
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 580 --------------------------SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ 613
+P+VV YT I + + +A+ L + M+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 614 IQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
QPN+VTY ++ +G + +++ CL + + M G
Sbjct: 775 CQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKG 809
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 58/421 (13%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G Y K+ ++ ++ Q + ++ ++N NA ++ +++ M++ G++AD+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
I++ + C AG A++ + E++ + +V TY+ ++ + AK A ++ E
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP-----------NSQCC 436
MLS G PN +T+S+LI+ AG VE+A +FE M + P NS+
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 437 NI-----LLQACVEACQFDRAFRLFRSWTLS---KTQVALGEDYDGNTDRISNMEHKDKQ 488
N+ LL ++ + + A +L + ++ Q+ DG ++ ++ +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC-KVGKLDEAQEV 696
Query: 489 SITNTPNFVPNSHY---SSFDKRFSFK------------------PTTTTYNILMKACC- 526
+ + P + Y S D+ F K P Y ++ C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 527 ---TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
TD LM M G PN +++T +ID G G +E L++L+ M G++P+
Sbjct: 757 VGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR-----YGSLHEVQ 638
V Y I C ++ L A +L EEMK + Y ++ ++ G L E+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 639 Q 639
Q
Sbjct: 875 Q 875
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 61/353 (17%)
Query: 315 MQKLGVMADM------ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+++LG + D ++YN L++A A A I+ E+ + L++D FT
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRC 275
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
W+ AL + E + P+T+ ++ LI+ A L E+AM M
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C PN + LL C L+K Q+ G R+ NM +
Sbjct: 333 CLPNVVTYSTLLCGC-----------------LNKKQL-------GRCKRVLNMMM--ME 366
Query: 489 SITNTP---NFVPNSHYSSFDKRFSFK-----------PTTTTYNILMKACCTDYYRVKA 534
+P N + +++ +S D +++K P YNIL+ + C D +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 535 LM--------NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAY 586
+ +EM G+ N I+ + +G E A +++ M G PD Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 587 TTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ + + +++ AF LFEEMK + ++ TY ++ + + G + + ++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 158/388 (40%), Gaps = 59/388 (15%)
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+LR TL + + SL V TL +N + D Y L+ C A
Sbjct: 265 NLRMDGFTLRCFAY-SLCKVGKWREALTLVETENF-----VPDTVFYTKLISGLCEAS-- 316
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
L +E + + A L +V TYST++ + K +V M+ G P+
Sbjct: 317 -LFEEAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++SL++A +G A L ++M++ G P NIL+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG------------------- 415
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSF----------DKRFS 510
++ D D + ++ K + + + SSF +K FS
Sbjct: 416 ------SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 511 ---------FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACG 559
F P T+TY+ ++ C A L EM+ GL + ++TI++D+
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
+G +E A + MRE G +P+VV YT I +++K++ A LFE M PN+V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 620 TYITLLRARSRYGSLHEVQQCLAVYQDM 647
TY L+ + G +V++ +++ M
Sbjct: 590 TYSALIDGHCKAG---QVEKACQIFERM 614
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 139/369 (37%), Gaps = 100/369 (27%)
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+FNSL++ + D + ++ K M K G M YNIL+ + C G+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD----------- 420
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K L D+ +A K +ML+AGV N I SS +
Sbjct: 421 -----KDSLNCDLL---------------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
AG E+A + EM+ G P++ + +L A + + AF LF
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM----------- 509
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD-- 528
KR TY I++ + C
Sbjct: 510 ------------------------------------KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 529 YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
+ + NEMR VG +PN +++T LI A + V A ++ + M +G P++V Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 589 AIKVCVRSKRLKQAFSLFEEM-------------KHYQI---QPNLVTYITLLRARSRYG 632
I ++ ++++A +FE M K Y +PN+VTY LL +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 633 SLHEVQQCL 641
+ E ++ L
Sbjct: 654 RVEEARKLL 662
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 199 QLCVNK--PDVNLAIR-YACIVPRADIL-FCNFVREFGKKRDLVSALRAYDASKKHLSSP 254
++C +K PDV++ + Y R +++ + + F K + A + DA P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 255 NMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----VNAHDLKFT 308
N + +ID G+C G +++ + ++ +Y ++SL++ V DL
Sbjct: 673 NQIVYDALID--GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL--A 728
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+V M + ++ Y ++ C G T E Y ++ +E KG + +V TY+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT---DEAYKLMQMMEEKGC-QPNVVTYTA 784
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
++ F + L++ E M S GV PN +T+ LI+ C G ++ A +L EEM Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLN 290
K++DL S + ++ +PN+ I +ID G+C G ++ + + + + N
Sbjct: 723 KRQDLAS--KVLSKMLENSCAPNVVIYTEMID--GLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 291 IYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ + ++++ ++ LE+ + M GV + +Y +L+ CC G +A +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 349 EVKH---------------------LEAKGVL----KLDVFTYSTIVKVFAD----AKWW 379
E+K +E+ G+L + D + ++ ++ D A+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 380 QMALKVKEDM--LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+MAL++ E++ SA + + T++SLI + A VE A LF EM + G P Q
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 179/436 (41%), Gaps = 61/436 (13%)
Query: 222 ILFCNFVREF---GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
I++ + ++ F G+K D + Y SP++ + T +D G+ K RA+
Sbjct: 483 IVYTSLIKNFFNHGRKED---GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 279 YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
+E+++++ + ++ L++ + A T E++ +M++ G + D +YNI++ C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A ++ E+K KG + V TY +++ A A + E+ S +
Sbjct: 600 CGKVNKAYQLLEEMK---TKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
N + +SSLI+ G +++A + EE++Q G PN N LL A V+A + + A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
+S K P
Sbjct: 716 QSM-----------------------------------------------KELKCTPNQV 728
Query: 517 TYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TY IL+ C + + EM+ G+ P+ IS+T +I +GN+ A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 575 REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ +G PD Y I+ R AFSLFEE + + + T + LL + L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 635 HEVQQCLAVYQDMWKA 650
+ AV ++ KA
Sbjct: 849 EQAAIVGAVLRETGKA 864
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 222/527 (42%), Gaps = 56/527 (10%)
Query: 130 DCVVGVLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVK 189
D ++ + +++ ELG P L + G V+ + L++ ++
Sbjct: 185 DMMLTLFQQMQELGYEPT-------VHLFTTLIRGFAKEGRVDSALSLLDEMKS-----S 232
Query: 190 ELDEEFRIVQLCVNK----PDVNLAIRY-----ACIVPRADILFCNFVREFGKKRDLVSA 240
LD + + +C++ V++A ++ A + ++ + + + K L A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 241 LRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV 300
+ ++ +K+ P Y T+I G G + ++ ++ E R++ ++ +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 301 --NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGV 358
+ L+V++ M+K ++++YNIL+ C AG A E+ ++ K
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ----KAG 407
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
L +V T + +V ++ A + E+M TP+ IT+ SLI+ G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
++E+ML + C NS L++ + + ++++ D
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK-------------------DM 508
Query: 479 ISNMEHKDKQSITNTPNFV-----PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYY- 530
I+ D Q + + + P + F+ K F P +Y+IL+ +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 531 -RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
L M+ G + ++ I+ID G V A Q+L+ M+ G P VV Y +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
I + RL +A+ LFEE K +I+ N+V Y +L+ + G + E
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 174/401 (43%), Gaps = 35/401 (8%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
++E+++ ++ N+ +N L+++ A L E+ +MQK G+ ++ + NI++ C
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+ A ++ E+ + V D T+ +++ A KV E ML +
Sbjct: 424 KSQKLDEACAMFEEMDY----KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
N+I ++SLI N G E ++++M+ C P+ Q N + +A + ++ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 456 F------------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFV------ 497
F RS+++ + + + +M+ + T N V
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 498 ---PNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHIS 550
N Y + K F+PT TY ++ +A M E ++ + N +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G G ++ A IL+ + + G++P++ + + + V+++ + +A F+ MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 611 HYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ PN VTY L+ + + + + +Q+M K G
Sbjct: 720 ELKCTPNQVTYGILINGLCK---VRKFNKAFVFWQEMQKQG 757
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 142/351 (40%), Gaps = 61/351 (17%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
VN D+ TL ++ MQ+LG + + L++ G A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK----SSSL 234
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
D+ Y+ + F MA K ++ + G+ P+ +T++S+I A +++A+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+FE + + P + N ++ A +FD A+ L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE---------------------- 332
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALM 536
+ K SI P+ YN ++ C +V +
Sbjct: 333 ---RQRAKGSI----------------------PSVIAYNCIL-TCLRKMGKVDEALKVF 366
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
EM+ +PN ++ ILID +G ++ A ++ M++ G+ P+V + +S
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
++L +A ++FEEM + P+ +T+ +L+ + G V VY+ M
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG---RVDDAYKVYEKM 473
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 55/413 (13%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+I FC+ + GK + A + Y+ N + ++I G IY+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 281 DLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAG 338
D+ +QN + ++ + N+ M+ A + + +++ ++ + D SY+IL+ AG
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E Y ++ +G + LD Y+ ++ F A ++ E+M + G P
Sbjct: 567 ---FANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+ S+I+ A +++A LFEE E N + L+ + + D A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI--- 679
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
+E ++ +T P T+
Sbjct: 680 -----------------------LEELMQKGLT---------------------PNLYTW 695
Query: 519 NILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
N L+ A +AL+ M+ + +PN +++ ILI+ A + M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
GM P ++YTT I ++ + +A +LF+ K P+ Y ++ S
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
C N ++Q + EM AG P+ C ++ CV+A + + + + K + A
Sbjct: 111 CRNFDALDQ---ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK--RFSFKPTTTTYNILMKAC 525
Y S + H D + F + ++PT + L++
Sbjct: 168 FSA-YTTLIGAFSAVNHSDMM-------------LTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 526 CTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ RV + L++EM++ L + + + + ID+ G G V+ A + + +G+ PD
Sbjct: 214 AKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
V YT+ I V ++ RL +A +FE ++ + P Y T++ G E L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 55/367 (14%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D+ L + K M+K + AD+ YN ++ C + A ++ E ++ KG+ + DV
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE---MDNKGI-RPDV 293
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG-LVE------- 415
FTYS+++ + W A ++ DM+ + PN +T+S+LI+A G LVE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 416 ---------------------------QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQ 448
+A H+FE M+ C PN + L++ +A +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 449 FDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDK 507
+ LFR +S+ + GNT + + H Q+ + V S
Sbjct: 414 VEEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---- 461
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVE 565
P TYNIL+ C + KA++ ++ + P+ ++ I+I+ +G VE
Sbjct: 462 -VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
++ + G+SP+V+AY T I R ++A SL ++MK PN TY TL+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 626 RARSRYG 632
RAR R G
Sbjct: 581 RARLRDG 587
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 179/393 (45%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I FN L++ A KF L + + MQ LG+
Sbjct: 66 DAVDLFGDMVKSRPFP----------SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
D+ +Y+I + C LA + ++ L + D+ T S+++ + +K
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLSSLLNGYCHSKRISD 171
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T T+++LI+ +A+ L ++M+Q GC+P+ ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + +H D + N
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADV-VIYNTIIDGLCKYKHMD-----DALNL----- 280
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TY+ L+ +C +Y R L+++M ++PN ++++ LIDA
Sbjct: 281 FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL++ + V++ + ++++M + G
Sbjct: 399 VTYSTLIKG---FCKAKRVEEGMELFREMSQRG 428
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 68/402 (16%)
Query: 220 ADILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
AD++ N + K + + AL + P+++ ++I G + + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 279 YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCL 336
D+ + + N+ F++L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
+ E KH+ + K +V TYST++K F AK + +++ +M G
Sbjct: 376 -------HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ NT+T+++LI+ A + A +F++M+ G PN NILL + + +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+F + +R + +P
Sbjct: 489 VVFE-----------------------------------------------YLQRSTMEP 501
Query: 514 TTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
TYNI+++ C D + L + G+SPN I++ +I G+ E A
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWE---LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+LK M+EDG P+ Y T I+ +R + + L +EM+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 32/331 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G D+ +Y ++ C G+ LA + +K +E KG ++ DV Y+TI+
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL---LKKME-KGKIEADVVIYNTIIDGLC 269
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
K AL + +M + G+ P+ T+SSLI+ N G A L +M++ PN
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
+ L+ A V+ + A +L YD R + + S+ N
Sbjct: 330 TFSALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 371
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TY+ L+K C RV+ L EM GL
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-AKRVEEGMELFREMSQRGLV 430
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M G+ P+++ Y + ++ +L +A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
FE ++ ++P++ TY ++ + G + +
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 61/337 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 381
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +Y+ L+K C A E++ E+ G + TY+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYT 437
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T++ L++ G + +AM +FE + ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF + +L
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS---------------------- 535
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
P YN ++ C + +A L+ +M+ G
Sbjct: 536 -------------------------PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
PN ++ LI A G+ E + +++K MR G + D
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 144/351 (41%), Gaps = 62/351 (17%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD------ 362
L V+ N+Q +G + S+ L + C + A Y E+ ++K+D
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71
Query: 363 -----------VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
+ ++ ++ A +++ + + E M + G++ + T+S IN
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ A+ + +M++ G EP+ + LL + + A L
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL---------------- 175
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR 531
D++ M +K P++ F+F TT + + + ++
Sbjct: 176 ----VDQMVEMGYK------------PDT--------FTF--TTLIHGLFLHNKASE--- 206
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL+++M G P+ +++ +++ G+++ AL +LK M + + DVV Y T I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ K + A +LF EM + I+P++ TY +L+ YG + + L+
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 55/377 (14%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLE 310
SP++ TI+ G ++ + + + ++ ++ + L+ D + ++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ M+ G D+ +YN+L+ C G E + + + G + +V T++ I+
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRL---DEAIKFLNDMPSSGC-QPNVITHNIIL 316
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ W A K+ DML G +P+ +T++ LIN GL+ +A+ + E+M Q GC+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
PNS N LL + + DRA
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLE--------------------------------- 403
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
V Y P TYN ++ A C D A ++N++ + G SP
Sbjct: 404 ----RMVSRGCY----------PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
I++ +ID +G A+++L MR + PD + Y++ + R ++ +A F E
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 609 MKHYQIQPNLVTYITLL 625
+ I+PN VT+ +++
Sbjct: 510 FERMGIRPNAVTFNSIM 526
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 36/360 (10%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
++ G + D+ +YN+++ C AG EI + L+ V DV TY+TI++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAG------EINNALSVLDRMSV-SPDVVTYNTILRSLC 215
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCEPNS 433
D+ + A++V + ML P+ IT++ LI A C ++G V AM L +EM GC P+
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDV 274
Query: 434 QCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------VALGEDYDGNTDRIS 480
N+L+ + + D A + S Q + G D ++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK-LLA 333
Query: 481 NMEHKDKQSITNTPNFVPN---------SHYSSFDK--RFSFKPTTTTYNILMKACCTDY 529
+M K T N + N +K + +P + +YN L+ C +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 530 YRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYT 587
+A+ + M + G P+ +++ ++ A G VE A++IL + G SP ++ Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 588 TAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
T I ++ + +A L +EM+ ++P+ +TY +L+ SR G + E + ++ M
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 57/273 (20%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
K E+M+ G P+ I ++LI G +A + E + +G P+ N+++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+A + + A +
Sbjct: 181 GYCKAGEINNALSVL--------------------------------------------- 195
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---NEMRTVGLSPNHISWTILIDAC 558
R S P TYN ++++ C D ++K M + M P+ I++TILI+A
Sbjct: 196 -----DRMSVSPDVVTYNTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
V A+++L MR+ G +PDVV Y + + RL +A +M QPN+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+T+ +LR+ G + ++ LA DM + G
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLA---DMLRKG 339
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 16/229 (6%)
Query: 235 RDLVSALRAYDASK------KHLSSPNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQN 286
R + S R DA K + SP++ +I+ +C + RAI E +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF--LCRKGLLGRAIDILEKMPQHG 374
Query: 287 VTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
N +N L++ + K +E + M G D+ +YN +L A C G A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
EI + L +KG + + TY+T++ A A A+K+ ++M + + P+TIT+SSL
Sbjct: 435 EI---LNQLSSKGCSPV-LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ + G V++A+ F E + G PN+ N ++ ++ Q DRA
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 145/358 (40%), Gaps = 63/358 (17%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ +++R + T ++ +N L+N L ++ +M G ++ ++NI+L++ C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 336 LAGNTVLAQEIYGE----------------VKHLEAKGVL--KLDVF------------- 364
G + A+++ + + L KG+L +D+
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
+Y+ ++ F K A++ E M+S G P+ +T+++++ A G VE A+ + ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNT 476
GC P N ++ +A + +A +L + T++ + + G +G
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL- 535
D H+ F+ R +P T+N +M C +A+
Sbjct: 501 DEAIKFFHE-------------------FE-RMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+ M G PN S+TILI+ G + AL++L + G+ A A K+
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C + RAI E + S+ +I +N+++ D K +E+ + G
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
+ +YN ++ AG T A ++ E++ + LK D TYS++V + A
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD----LKPDTITYSSLVGGLSREGKVDEA 503
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+K + G+ PN +T++S++ + ++A+ M+ GC+PN IL++
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 36.2 bits (82), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G +E + L+ M G PD++ TT I+ R + ++A + E ++ P+++T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 621 YITLLRARSRYGSLHEVQQCLAVYQDM 647
Y ++ + G E+ L+V M
Sbjct: 175 YNVMISGYCKAG---EINNALSVLDRM 198
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 194/466 (41%), Gaps = 55/466 (11%)
Query: 221 DILFCNFVR--EFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
+IL + VR EF K A+D K +S P++Y+ T I+ G ++ +
Sbjct: 243 NILLTSLVRANEFQK------CCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 279 YEDLRSQNVTLNIYVFNSLMN----VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ + V N+ FN++++ +D F + + M + G+ + +Y+IL+K
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGL 353
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
A + Y +K + KG +V Y+ ++ F +A A+++K+ M+S G+
Sbjct: 354 TRAKRI---GDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+ + T+++LI G + A L +EML G N ++ FD A R
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN-------TPNFVPNSHYSS--- 504
L G T IS + K S FV ++ S+
Sbjct: 470 FVGEMLLRNMSPGGGL----LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 505 --------FDKRFSFKPTT---------TTYNILMKACCTDYYRVKALM--NEMRTVGLS 545
D+ F + +YN L+ CC +A M +EM GL
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
P++ +++ILI VE A+Q + +GM PDV Y+ I C +++R ++
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F+EM +QPN V Y L+RA R G L L + +DM G
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRL---SMALELREDMKHKG 688
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 59/390 (15%)
Query: 253 SPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFT 308
SP + T+I G+C G + K+ ++ ++ ++ N+L++ A L
Sbjct: 480 SPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+ K + G + D SYN L+ CC G L E + + + +G LK D +TYS
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCC--GKKKL-DEAFMFLDEMVKRG-LKPDNYTYSI 593
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A++ +D G+ P+ T+S +I+ C A E+ F+EM+
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
+PN+ N L++A + R+ RL + L + +M+HK
Sbjct: 654 VQPNTVVYNHLIRA------YCRSGRLSMALELRE-----------------DMKHK--- 687
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSP 546
P + TY L+K + + K L EMR GL P
Sbjct: 688 ---------------------GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +T LID G G + +L+ M + P+ + YT I R + +A L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
EM+ I P+ +TY + + G + E
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 67/481 (13%)
Query: 223 LFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDL 282
LF + F K + A++ + ++ +PN+ T+ID G+CG Y ++ E +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 283 --RSQNVTL---------------------------------NIYVFNSLMN--VNAHDL 305
R TL N+ V+N+L++ + A L
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
+E+ M G+ ++YN L+K C G A+ + E+ + ++ +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG----FNVNQGS 450
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+++++ + + AL+ +ML ++P ++LI+ G +A+ L+ + L
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFR-----LFRSWTLSKT-----------QVALG 469
G +++ N LL EA + D AFR L R + + + L
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 470 EDYDGNTDRISNMEHKDKQSIT-------NTPNFVPNSHYSSFDKRFSFKPTTTTYNILM 522
E + + + D + + N + KR P TY++++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 523 KACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
CC + +EM + + PN + + LI A SG + AL++ + M+ G+S
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ YT+ IK R+++A LFEEM+ ++PN+ Y L+ + G + +V +C
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV-EC 749
Query: 641 L 641
L
Sbjct: 750 L 750
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 53/335 (15%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
LE++ G + D + N LL C AG E + K + +G + +D +Y+T
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKL---DEAFRIQKEILGRGCV-MDRVSYNT 558
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ K A ++M+ G+ P+ T+S LI N VE+A+ +++ + G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ ++++ C +A + + F M K+ Q
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFF-----------------------DEMMSKNVQ 655
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
P T YN L++A C AL +M+ G+SP
Sbjct: 656 ------------------------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N ++T LI VE A + + MR +G+ P+V YT I + ++ + L
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
EM + PN +TY ++ +R G++ E + L
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A++ +D K++ P++Y +ID C + + ++++ S+NV N V+N L+
Sbjct: 607 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 666
Query: 300 V--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
+ L LE+ ++M+ G+ + A+Y L+K + A+ ++ E++ +E
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEG-- 723
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKVK---EDMLSAGVTPNTITWSSLINACANAGLV 414
L+ +VF Y+ ++ + K QM +KV+ +M S V PN IT++ +I A G V
Sbjct: 724 -LEPNVFHYTALIDGY--GKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 779
Query: 415 EQAMHLFEEMLQAGCEPNS 433
+A L EM + G P+S
Sbjct: 780 TEASRLLNEMREKGIVPDS 798
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 37/341 (10%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+V+ + G+ + NILL + A E + V KGV DV+ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV----CKGV-SPDVYLF 276
Query: 367 STIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ 426
+T + F + A+K+ M AGV PN +T++++I+ G ++A E+M++
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 427 AGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
G EP +IL++ A + A+ + + T + + N +N+
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT--------KKGFPPNVIVYNNL---- 384
Query: 487 KQSITNTPNFVPNSHYSSFDKRFSFKP---------TTTTYNILMKACCTDYYRVKA--L 535
+F+ S +K K T++TYN L+K C + A L
Sbjct: 385 ------IDSFI---EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ EM ++G + N S+T +I + AL+ + M MSP TT I +
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +A L+ + + + T LL G L E
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 513 PTTTTYNILM---------KACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P+ TT NIL+ + CC + ++ G+SP+ +T I+A G
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAF--------DVVCKGVSPDVYLFTTAINAFCKGGK 288
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
VE A+++ M E G++P+VV + T I R +AF E+M ++P L+TY
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 624 LLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L++ +R + V ++M K G
Sbjct: 349 LVKGLTR---AKRIGDAYFVLKEMTKKG 373
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 33/409 (8%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
S P++ T+I+ GD K+ + Y ++ + + ++ +NS++ A + +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
EV M K GVM D +YN +L C +G +E G +K + + GV + DV TYS +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQ---PKEAIGFLKKMRSDGV-EPDVVTYSLL 307
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ A K+ + M G+ P T+ +L+ A G + + L + M++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYD--GNTDRISNMEH 484
P+ +IL+ A + + D+A +F R L+ V G + R+ +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
+Q I P YN L+ CT + R + L+ EM
Sbjct: 428 YFEQMIDE-----------------GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ N I + +ID+ G V + ++ ++M G+ P+V+ Y T I + ++ +A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L M ++PN VTY TL+ Y + ++ L ++++M +G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLING---YCKISRMEDALVLFKEMESSG 576
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)
Query: 267 GICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMA 322
G C AI + +RS V ++ ++ LM+ + + +++ +M K G+
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +Y LL+ G V E++G + + G+ D + +S ++ +A A
Sbjct: 335 EITTYGTLLQGYATKGALV---EMHGLLDLMVRNGI-HPDHYVFSILICAYAKQGKVDQA 390
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G+ PN +T+ ++I +G VE AM FE+M+ G P + N L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+++RA L + + L + + I + K+ + I + F
Sbjct: 451 LCTCNKWERAEELI--LEMLDRGICLNTIF---FNSIIDSHCKEGRVIESEKLF------ 499
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
R KP TYN L+ C +A L++ M +VGL PN ++++ LI+
Sbjct: 500 -ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+E AL + K M G+SPD++ Y ++ +++R A L+ + Q L T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 621 YITLLRA 627
Y +L
Sbjct: 619 YNIILHG 625
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 70/420 (16%)
Query: 275 SRAIYEDLRSQNVTLNIYVFN-SLMNVNAHDLKFTLEVYKNMQKLG---VMADMASYNIL 330
+R ++++L + +IY N +L +V + Y M + G V D+ +Y IL
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93
Query: 331 LKACCLAGNTVLAQEIYGEV---------------------------------KHLEAKG 357
+ CC AG L G V + + G
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 358 VLKLDVFTYSTIVKVFADAKWWQMALKV---KEDMLSAGVTPNTITWSSLINACANAGLV 414
+ +VF+Y+ ++K D Q AL++ D G P+ ++++++IN G
Sbjct: 154 CIP-NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQV 466
++A + EML G P+ N ++ A +A D+A + + ++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-----------------YSSFDKRF 509
G G K +S P+ V S + S KR
Sbjct: 273 LHGYCSSGQPKEAIGFLKK-MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR- 330
Query: 510 SFKPTTTTYNILMKACCTDYYRVK--ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
KP TTY L++ T V+ L++ M G+ P+H ++ILI A G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + MR+ G++P+ V Y I + +S R++ A FE+M + P + Y +L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 183/415 (44%), Gaps = 24/415 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
IL C + ++ GK + A+ + ++ +PN +I + G + +E
Sbjct: 376 ILICAYAKQ-GK---VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + ++ V+NSL++ + + E+ M G+ + +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ +++++ L + +K +V TY+T++ + A A+K+ M+S G+ PNT+
Sbjct: 492 VIESEKLF----ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+S+LIN +E A+ LF+EM +G P+ NI+LQ + + A L+
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
T S TQ+ L + I + K+K + F + D + + +
Sbjct: 608 TESGTQIEL-----STYNIILHGLCKNKLTDDALQMF---QNLCLMDLKLEARTFNIMID 659
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
L+K D K L + GL PN+ ++ ++ + G G +E Q+ M ++G
Sbjct: 660 ALLKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 580 SPDVVAYTTAIKVCVRSKRLKQA---FSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ D ++ ++ + +A S+ +E KH+ ++ + + L + +Y
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFSLEASTASLFIDLLSGGKY 771
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 537 NEMRTVG---LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
N M G ++P+ ++ ILI C +G ++ L + + G D +A+T +K
Sbjct: 73 NRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL 132
Query: 594 VRSKRLKQAFSL-FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
KR A + M PN+ +Y LL+ E + L + D G
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYD-GNTDRI----SNMEHKDKQSITNT 493
+ A R+ S L + +G D NT+++ ++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 74/358 (20%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
+PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA--------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 356 ------------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
+G LD+ Y+ ++ +F D + ++ DM G P+
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK--- 512
L H T N + N S +F + S K
Sbjct: 641 DMGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 513 ------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 679 KMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 545 SPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFS 604
+PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 605 LFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ +P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ R+ H + + + DM K G
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEG 471
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 45/176 (25%)
Query: 511 FKPTTTTYNILM----KACCTDYYRVKALMNEMRTVGLSPNHI----------------- 549
F P T +I++ K ++ AL++ + G+SPN +
Sbjct: 218 FPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANA 277
Query: 550 SWTILID-----------------AC-GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+W IL D +C G + ++ ++ M E + PDVV I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 592 VCVRSKRLKQAFSLFEEMKHYQ------IQPNLVTYITLLRARSRYGSLHEVQQCL 641
+S+R+ +A +FE+M+ + I+ + + + TL+ + G L E ++ L
Sbjct: 338 TLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
+YN L+ C AG A+E+ +K E +K +V T +TIV MA+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
DM GV N +T+ +LI+AC + VE+AM+ +E+ML+AGC P+++ L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 446 ACQFDRAFRLFR-------SWTLSKTQVALGEDYDGNT-----DRISNMEHKDKQSITNT 493
+ A R+ S L + +G D N + +++ME + K
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK------ 577
Query: 494 PNFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISW 551
KP + TYN L+ D+ V+ +M +MR GL P ++
Sbjct: 578 ------------------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 552 TILIDACGGSGNVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
+IDA G ++ AL++ K M ++P+ V Y I + QA SL EEMK
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 611 HYQIQPNLVTYITLLR 626
++PN+ TY L +
Sbjct: 680 MKMVRPNVETYNALFK 695
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 74/357 (20%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN +ID G ++ + ++ + N+ N+++ H L +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA---------------- 355
+ +M+K GV ++ +Y L+ ACC N + + +Y K LEA
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 356 -----------------KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
+G LD+ Y+ ++ +F D + ++ DM G P++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
IT+++LI+ E + E+M + G +P ++ A + D A +LF+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN--SHYSSFDKRFSFK---- 512
L H T N + N S +F + S K
Sbjct: 642 MGL----------------------HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 513 -----PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHISWTILIDACGGS 561
P TYN L K C + + + LM+EM PN I+ IL++ GS
Sbjct: 680 MKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN +++ LID +G +E A +++ M+ED + P+VV T + R L A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F +M+ ++ N+VTY+TL+ A S+ V++ + Y+ M +AG
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHA---CCSVSNVEKAMYWYEKMLEAG 506
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 511 FKPTTTTYNILMKACCTDYYRVKAL-----MNEMRTVG---LSPNHISWTILIDACGGSG 562
+P T IL+ C +AL M RT + + I + LID G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 563 NVEGALQILKIMR-EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A ++L M+ E+ P+ V Y I R+ +L+ A + MK +I+PN+VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
T++ R+ H + + + DM K G
Sbjct: 445 NTIVGGMCRH---HGLNMAVVFFMDMEKEG 471
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 45/176 (25%)
Query: 511 FKPTTTTYNILMKACCTDYY----RVKALMNEMRTVGLSPNHI----------------- 549
F P T +I++ + ++ AL++ + G+SPN +
Sbjct: 218 FPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 550 SWTILID-----------------AC-GGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
+W IL D +C G + ++ ++ M E + PDVV I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 592 VCVRSKRLKQAFSLFEEMKHYQ------IQPNLVTYITLLRARSRYGSLHEVQQCL 641
+S+R+ +A +FE+M+ + I+ + + + TL+ + G L E ++ L
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 163/363 (44%), Gaps = 55/363 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
++ + +N+ ++ ++ +++ D F L ++ M+ G+ AD+ +Y+ L+ C
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G ++ ++ + + ++ DV T+S ++ VF A ++ +M++ G+
Sbjct: 292 NDGKWDDGAKM---LREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
P+TIT++SLI+ + +A +F+ M+ GCEP+ +IL+ + +A + D RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
FR + + +PN T
Sbjct: 408 FREIS--------------------------------SKGLIPN---------------T 420
Query: 516 TTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
TYN L+ C K L EM + G+ P+ +++ IL+D +G + AL+I +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M++ M+ + Y I + ++ A+SLF + ++P++VTY ++ + GS
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 634 LHE 636
L E
Sbjct: 541 LSE 543
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 265 VCGICGD--YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGV 320
+ G+C D + + ++ +N+ ++ F++L++V + K E+Y M G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
D +YN L+ C A +++ + +KG + D+ TYS ++ + AK
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMF---DLMVSKGC-EPDIVTYSILINSYCKAKRVD 402
Query: 381 MALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILL 440
+++ ++ S G+ PNTIT+++L+ +G + A LF+EM+ G P+ ILL
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 441 QACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNS 500
+ + ++A +F S+ + +G Y+ + N D S
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDAW----------S 511
Query: 501 HYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDA- 557
+ S + KP TYN+++ C +A L +M+ G +P+ ++ ILI A
Sbjct: 512 LFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
GGSG + ++++++ M+ G S D I + + +RL ++F
Sbjct: 571 LGGSGLIS-SVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLDKSF 614
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 265 VCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADM 324
V G C M+ I D+ + + +N Y L F V KLG D
Sbjct: 89 VLGFCKG-MELNGIEHDMYTMTIMINCYC-------RKKKLLFAFSVLGRAWKLGYEPDT 140
Query: 325 ASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK 384
+++ L+ CL G A + + ++ + D+ T ST++ AL
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP----DLVTVSTLINGLCLKGRVSEALV 196
Query: 385 VKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACV 444
+ + M+ G P+ +T+ ++N +G A+ LF +M + + + +I++ +
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 445 EACQFDRAFRLFRSWTLSKTQVAL--------GEDYDGNTDRISNMEHKDKQSITNTPNF 496
+ FD A LF + + + G DG D + M ++ I N
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML---REMIGR--NI 311
Query: 497 VPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTIL 554
+P+ T++ L+ + K L NEM T G++P+ I++ L
Sbjct: 312 IPD---------------VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
ID + A Q+ +M G PD+V Y+ I ++KR+ LF E+ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
PN +TY TL+ + G L+ ++ ++Q+M G
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKE---LFQEMVSRG 450
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 17/240 (7%)
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
V A+ LFE M+Q+ P N L A Q+D + L+ G ++D
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN------GIEHD 104
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYR 531
T I + K+ + + + + + ++P T T++ L+ C +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAW------KLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
AL++ M + P+ ++ + LI+ G V AL ++ M E G PD V Y +
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+S A LF +M+ I+ ++V Y ++ + + GS + L+++ +M G
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA---LSLFNEMEMKG 275
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 28/253 (11%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + E M+ + P I ++ L +A A + + + M G E + I++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 442 ACVEACQFDRAFR-LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQSITNTP 494
+ AF L R+W L Y+ +T S + E + +++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLG---------YEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWT 552
V +P T + L+ C +AL ++ M G P+ +++
Sbjct: 165 RMVEMKQ----------RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+++ SGN AL + + M E + VV Y+ I + A SLF EM+
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 613 QIQPNLVTYITLL 625
I+ ++VTY +L+
Sbjct: 275 GIKADVVTYSSLI 287
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN T+ V G C G ++ +++++ S+ V ++ + L++ + +L L
Sbjct: 418 PNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
E+++ MQK + + YNI++ C A A ++ L KGV K DV TY+ +
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC---SLSDKGV-KPDVVTYNVM 531
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAG 428
+ A + M G TP+ T++ LI A +GL+ ++ L EEM G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCG 590
Query: 429 CEPNSQCCNILLQACVEACQFDRAF 453
+S +++ + + D++F
Sbjct: 591 FSADSSTIKMVIDMLSDR-RLDKSF 614
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 24/377 (6%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKL 318
I V G+C GD + ++ + + + + ++N++++ N ++ L ++ M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G+ ++ +YN L++ C G A + ++ +E K + +V T+S ++ F
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSALIDAFVKEGK 341
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C PN N
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-NTPNFV 497
L++ +A + D LFR +S+ + GNT + + H Q+ + V
Sbjct: 402 LIKGFCKAKRVDEGMELFRE--MSQRGLV------GNTVTYTTLIHGFFQARECDNAQIV 453
Query: 498 PNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILI 555
S P TY+IL+ C + AL+ ++ + P+ ++ I+I
Sbjct: 454 FKQMVSD-----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ +G VE + + G+ P+VV YTT + R ++A +LF EMK
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 616 PNLVTYITLLRARSRYG 632
P+ TY TL+RA R G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 176/393 (44%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D + GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 64 DAVNLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+IL+ C LA + ++ L + D+ T ++++ F
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP----DIVTLNSLLNGFCHGNRISD 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + M+ G P++ T+++LI+ +A+ L + M+ GC+P+ I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D A L + K + + Y+ D + N +++ + N
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGV-VIYNTIIDALCNY-----KNVNDALNL----- 278
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ D + +P TYN L++ C +Y R L+++M ++PN ++++ LIDA
Sbjct: 279 FTEMDNK-GIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL++ + V + + ++++M + G
Sbjct: 397 VTYNTLIKG---FCKAKRVDEGMELFREMSQRG 426
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 32/327 (9%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y I++ C G+ LA + +K +E +G ++ V Y+TI+ + K
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSL---LKKME-QGKIEPGVVIYNTIIDALCNYKN 271
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
AL + +M + G+ PN +T++SLI N G A L +M++ PN +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L YD R + + S+ N F
Sbjct: 332 LIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN--GFCM 373
Query: 499 NSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNHI 549
+ F P TYN L+K C RV L EM GL N +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTV 432
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
++T LI + + A + K M DG+ PD++ Y+ + + +++ A +FE +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 610 KHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +++P++ TY ++ + G + +
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVED 519
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 61/330 (18%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 379
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYT 435
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV P+ +T+S L++ N G VE A+ +FE + ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 530
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP TY +M C + AL EM+ G
Sbjct: 531 ----------------------GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMR 575
P+ ++ LI A G+ + ++++ MR
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 143/364 (39%), Gaps = 61/364 (16%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK +++ +M G+ NT+T+++LI+ A + A +F++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + A +F SK +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME----------------------- 498
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSP 546
P TYNI+++ C L + G+ P
Sbjct: 499 ------------------------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N +++T ++ G E A + + M+E+G PD Y T I+ +R + L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 607 EEMK 610
EM+
Sbjct: 595 REMR 598
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 179/393 (45%), Gaps = 35/393 (8%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ G +KSR + +I+ FN L++ A KF L + + MQ+LG+
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ D AF L +K + + Y D + H+D +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANV-VIYSTVIDSLCKYRHEDDAL----------NL 282
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILIDAC 558
++ + + +P TY+ L+ +C +Y R L+++M ++PN +++ LIDA
Sbjct: 283 FTEMENK-GVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G + A ++ M + + PD+ Y++ I RL +A +FE M PN+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
VTY TL+ + + + + ++++M + G
Sbjct: 401 VTYNTLING---FCKAKRIDEGVELFREMSQRG 430
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 32/331 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G ++ +Y +++ C G+ LA + + +EA + + +V YST++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLA---FNLLNKMEAAKI-EANVVIYSTVIDSLC 271
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ AL + +M + GV PN IT+SSLI+ N A L +M++ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
N L+ A V+ + A +L YD R + + S+ N
Sbjct: 332 TFNALIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLIN-- 373
Query: 495 NFVPNSHYSSFDKRFSFK------PTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLS 545
F + F P TYN L+ C R+ L EM GL
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK-AKRIDEGVELFREMSQRGLV 432
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
N +++T LI + + + A + K M DG+ P+++ Y T + ++ +L++A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
FE ++ +++P + TY ++ + G + +
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 26/371 (7%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + N+ +++++++ L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ GV ++ +Y+ L+ C A + ++ +E K + +V T++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--IERK--INPNVVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L+ +A + D LFR +S+ + GNT + + H Q+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFRE--MSQRGLV------GNTVTYTTLIHGFFQA 448
Query: 490 IT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
+ V S P TYN L+ C + KA++ ++ + P
Sbjct: 449 RDCDNAQMVFKQMVSD-----GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
++ I+I+ +G VE + + G+ PDV+ Y T I R ++A +LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 607 EEMKHYQIQPN 617
+M+ P+
Sbjct: 564 RKMREDGPLPD 574
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNIL 330
D M R +L + V V N L DL F L M+ + A++ Y+ +
Sbjct: 214 DRMVQRGCQPNLVTYGV-----VVNGLCKRGDIDLAFNL--LNKMEAAKIEANVVIYSTV 266
Query: 331 LKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
+ + C + A ++ E +E KGV + +V TYS+++ + + W A ++ DM+
Sbjct: 267 IDSLCKYRHEDDALNLFTE---MENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
+ PN +T+++LI+A G + +A L++EM++ +P+ + L+ + D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNT---DRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
A +F ++ + +D N + + N K K+ F S
Sbjct: 383 EAKHMF--------ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
++ TT + C + + + +M + G+ PN +++ L+D +G +E A
Sbjct: 435 TVTY--TTLIHGFFQARDCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
+ + + ++ M P + Y I+ ++ +++ + LF + ++P+++ Y T++
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
R G E A+++ M + G
Sbjct: 550 FCRKGLKEEAD---ALFRKMREDG 570
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 383
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+ C A E++ E+ G + TY+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG----NTVTYT 439
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T++ F A+ A V + M+S GV PN +T+++L++ G +E+AM +FE + ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ 465
EP NI+++ +A + + + LF S +L +
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 140/368 (38%), Gaps = 61/368 (16%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K R AL + + PN+ ++I + + + D
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FN+L++ + K ++Y M K + D+ +Y+ L+ C+
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--- 377
Query: 340 TVLAQEIYGEVKHLEAKGVLK---LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
+ E KH+ + K +V TY+T++ F AK +++ +M G+
Sbjct: 378 ----HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
NT+T+++LI+ A + A +F++M+ G PN N LL + + ++A +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 457 RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTT 516
SK + PT
Sbjct: 494 EYLQRSKME-----------------------------------------------PTIY 506
Query: 517 TYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIM 574
TYNI+++ C L + G+ P+ I + +I G E A + + M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 575 REDGMSPD 582
REDG PD
Sbjct: 567 REDGPLPD 574
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 45/251 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYM-KSRAIY 279
+ F + F K+ LV A + YD K P+++ ++I+ G C D + +++ ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMF 388
Query: 280 EDLRSQNVTLNIYVFNSLMN-------------------------------------VNA 302
E + S++ N+ +N+L+N A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 303 HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLD 362
D V+K M GV ++ +YN LL C G A ++ ++L+ + ++
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF---EYLQ-RSKMEPT 504
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
++TY+ +++ A + + + GV P+ I ++++I+ GL E+A LF
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 423 EMLQAGCEPNS 433
+M + G P+S
Sbjct: 565 KMREDGPLPDS 575
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 197/449 (43%), Gaps = 40/449 (8%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC-GDYMK-SRAIYEDLRSQNVTLN 290
K D+ L ++ K P+++I +ID G+C G M + +++++ ++ + +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
+ +N+L++ A + + + +V + M+ + + ++N LLK AG A+ +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
E+K L G + D FT+S + ++ + + AL V E + +GV N T S L+NA
Sbjct: 309 EMKDL---GFVP-DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA---FRLFRSWTLSKTQ 465
G +E+A + + G PN N ++ A +
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 466 VA----------LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS--SFDKRFSF-- 511
+A LGE + ++ M+ K T N + + FDK F
Sbjct: 425 LAYNCLIRRFCELGE-MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 512 -------KPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSG 562
P +Y L+ C ++A + +M G+SP + +LID C G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 563 NVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYI 622
+E A + K M + G+ ++V Y T I + +L +A L E+ ++P++ TY
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 623 TLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+L+ S YG VQ+C+A+Y++M ++G
Sbjct: 604 SLI---SGYGFAGNVQRCIALYEEMKRSG 629
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 24/407 (5%)
Query: 239 SALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLM 298
+AL Y+ + N Y C +++ G K+ I ++ + N ++N+++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 299 N--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAK 356
+ DL + M+K G+ D +YN L++ C G A++ EV ++ K
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNKMKLK 453
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
GV V TY+ ++ + + + ++M G PN +++ +LIN + +
Sbjct: 454 GV-SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNT 476
A + +M G P + N+L+ C + + AFR + ++ L Y+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL-VTYNTLI 571
Query: 477 DRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA--CCTDYYRVKA 534
D +S M K ++ + + R KP TYN L+ + R A
Sbjct: 572 DGLS-MTGK----LSEAEDLLLEIS------RKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L EM+ G+ P ++ +LI C EG ++ E + PD++ Y +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+++AF+L ++M I + TY +L+ + + G L EV+ +
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 59/447 (13%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
P++ T+ID G+ KS + E +++ ++ ++ FN+L+ A ++ V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+ LG + D +++IL A +Y +K++ +T S ++
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY----ETAVDSGVKMNAYTCSILLN 362
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGCE 430
+ A ++ ++ G+ PN + ++++I+ C LV M + E M + G +
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-EAMEKQGMK 421
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD---GNTDRISNMEH--- 484
P+ N L++ E + + A + L ++ E Y+ G R +
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV-ETYNILIGGYGRKYEFDKCFD 480
Query: 485 --KDKQSITNTPNFVPNSHY------------SSFDKR----FSFKPTTTTYNILMKACC 526
K+ + PN V + KR P YN+L+ CC
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 527 T-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
+ D +R EM G+ N +++ LID +G + A +L + G+ P
Sbjct: 541 SKGKIEDAFRFS---KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG-SLHE---- 636
DV Y + I + +++ +L+EEMK I+P L TY L+ ++ G L E
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 637 -------------VQQCLAVYQDMWKA 650
V C AV+ DM KA
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 21/354 (5%)
Query: 300 VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL 359
V + T+ V+ N+ + Y ++A + E++ +KH +
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH----DRI 210
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
VF Y+ ++ K A ++ ++ML+ + P+ IT+++LI+ AG E++
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRI 479
+ E M EP+ N LL+ +A + A + + LG D T I
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK------DLGFVPDAFTFSI 324
Query: 480 SNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
D S + ++ D K T +IL+ A C + KA ++
Sbjct: 325 LF----DGYSSNEKAEAALGVYETAVDS--GVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
GL PN + + +ID G++ GA ++ M + GM PD +AY I+
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ A +MK + P++ TY L+ YG +E +C + ++M G
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDILKEMEDNG 489
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 164/395 (41%), Gaps = 68/395 (17%)
Query: 204 KPDVNLAIRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTII 263
KPD + Y C++ R FC E G ++ +A + + K SP++ +I
Sbjct: 421 KPD---HLAYNCLIRR----FC----ELG---EMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLE---VYKNMQKLGV 320
G ++ K I +++ N+ + +L+N K LE V ++M+ GV
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL-LEAQIVKRDMEDRGV 525
Query: 321 MADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQ 380
+ YN+L+ CC G ++ + K + KG+ +L++ TY+T++ D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKI---EDAFRFSKEMLKKGI-ELNLVTYNTLI----DGLSMT 577
Query: 381 MALKVKEDML----SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCC 436
L ED+L G+ P+ T++SLI+ AG V++ + L+EEM ++G +P +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 437 NILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-----DYDGNTDRISNMEHKDKQSIT 491
++L+ C + + RLF +L + G+ ++ N++ KQ I
Sbjct: 638 HLLISLCTKE-GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ---KQMIE 693
Query: 492 NTPNFVPNSHYSSFDKRF------------------SFKPTTTTYNILMKACC--TDYYR 531
+ ++ S + +P TYNI++K C DY
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 532 VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
EM+ G L+D C G+ V G
Sbjct: 754 AYVWYREMQEKGF---------LLDVCIGNELVSG 779
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 44/436 (10%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P + + F ++ L AL K PN+ ++++ G C S
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN--GYCHSKRISE 169
Query: 277 AI-------YEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNI 329
A+ + VT N + ++ A + + + M G D+ +Y +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGV 226
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
++ C G+T LA + +++ +G L+ V Y+TI+ K AL + ++M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKME----QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQF 449
+ G+ PN +T+SSLI+ N G A L +M++ P+ + L+ A V+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 450 DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
A +L YD R + S+ N F + + F
Sbjct: 343 VEAEKL----------------YDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQMF 384
Query: 510 SFK------PTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILIDACGG 560
F P TYN L+K C Y RV+ M EM GL N +++ ILI
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
+G+ + A +I K M DG+ P+++ Y T + ++ +L++A +FE ++ +++P + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 621 YITLLRARSRYGSLHE 636
Y ++ + G + +
Sbjct: 504 YNIMIEGMCKAGKVED 519
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P + I TIID G+C A+ ++++ ++ + N+ ++SL++ N
Sbjct: 254 PGVLIYNTIID--GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ +M + + D+ +++ L+ A G V A+++Y E+ K + + TYS++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVTYSSL 367
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A ++ E M+S P+ +T+++LI VE+ M +F EM Q G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
N+ NIL+Q +A D A +F+ DG
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-----------SDG--------------- 461
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPN 547
VP P TYN L+ C + KA++ ++ + P
Sbjct: 462 -------VP--------------PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
++ I+I+ +G VE + + G+ PDVVAY T I R ++A +LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 608 EMKHYQIQPNLVTYITLLRARSRYG 632
EMK PN Y TL+RAR R G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 159/380 (41%), Gaps = 65/380 (17%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D + G+ +KSR +I F+ L++ A KF + + + MQ LG+
Sbjct: 64 DAVALFGEMVKSRPF----------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +Y+IL+ C LA + G++ L + ++ T S+++ + +K
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP----NIVTLSSLLNGYCHSKRISE 169
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M G PNT+T+++LI+ +AM L + M+ GC+P+ +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ G+TD N+ +K +Q
Sbjct: 230 GLCKR---------------------------GDTDLAFNLLNKMEQG------------ 250
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACG 559
+P YN ++ C + AL EM T G+ PN ++++ LI
Sbjct: 251 --------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
G A ++L M E ++PDV ++ I V+ +L +A L++EM I P++V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 620 TYITLLRARSRYGSLHEVQQ 639
TY +L+ + L E +Q
Sbjct: 363 TYSSLINGFCMHDRLDEAKQ 382
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+P+++ +ID G +++ +Y+++ +++ +I ++SL+N HD L +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C E++ E+ G + TY+ ++
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG----NTVTYNILI 438
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ A MA ++ ++M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P NI+++ +A + + + LF + +L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK---------------------------- 530
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPNH 548
KP YN ++ C + AL EM+ G PN
Sbjct: 531 -------------------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
+ LI A G+ E + +++K MR G + D
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+ +S ++ A + + + + E M + G+ N T+S LIN + A+ +
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+M++ G EPN + LL + + A L
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-------------------------- 174
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMR 540
D+ +T ++P T T+N L+ AL++ M
Sbjct: 175 ---DQMFVT------------------GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
G P+ +++ ++++ G+ + A +L M + + P V+ Y T I + K +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
A +LF+EM+ I+PN+VTY +L+ YG + + L+
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 291 IYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
I +FN+L++ V L V +M G++ D+ +YN L+ G LA E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++++ KG K +V++Y+ +V F A V +M + G+ PNT+ ++ LI+A
Sbjct: 413 HDMRN---KGC-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+ +A+ +F EM + GC+P+ N L+ E + A L R +S+ VA
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD-MISEGVVA 527
Query: 468 LGEDYDGNTDR-ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACC 526
Y+ + + E K+ + + N F S D+ TYN L+K C
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVF----QGSPLDE--------ITYNSLIKGLC 575
Query: 527 --TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVV 584
+ + ++L +M G +P++IS ILI+ SG VE A++ K M G +PD+V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 585 AYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ + I R+ R++ ++F +++ I P+ VT+ TL+ + G +++
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 31/314 (9%)
Query: 363 VFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFE 422
+FT+ ++K F AL + DM G PN++ + +LI++ + V +A+ L E
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 423 EMLQAGCEPNSQCCNILLQACVEACQFDRA-----------FRLFRSWTLSKTQVALGED 471
EM GC P+++ N ++ + C+FDR R F ++ + G
Sbjct: 277 EMFLMGCVPDAETFNDVI---LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 472 YDGNTDRISNMEH---KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD 528
G D ++ + K + I NT +H D + T+Y I+ C +
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 529 -----YYR------VKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
Y++ ++++MR G PN S+TIL+D G ++ A +L M D
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
G+ P+ V + I + R+ +A +F EM +P++ T+ +L+ S + E+
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVDEI 510
Query: 638 QQCLAVYQDMWKAG 651
+ L + +DM G
Sbjct: 511 KHALWLLRDMISEG 524
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 171/440 (38%), Gaps = 63/440 (14%)
Query: 217 VPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSR 276
+P F ++ F ++ SAL KH PN I +T+I C ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 277 AIYEDLRSQNVTLNIYVFNS-LMNVNAHD-LKFTLEVYKNMQKLGVMADMASYNILLKAC 334
+ E++ + FN ++ + D + ++ M G D +Y L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA-G 393
C G A++++ + K ++ ++T++ F A V DM+++ G
Sbjct: 333 CKIGRVDAAKDLFYRIP--------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
+ P+ T++SLI GLV A+ + +M GC+PN IL+ + + D A+
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ + DG KP
Sbjct: 445 NVLNEMSA-----------DG------------------------------------LKP 457
Query: 514 TTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
T +N L+ A C ++ +A + EM G P+ ++ LI ++ AL +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ M +G+ + V Y T I +R +K+A L EM + +TY +L++ R
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 632 GSLHEVQQCLAVYQDMWKAG 651
G EV + ++++ M + G
Sbjct: 578 G---EVDKARSLFEKMLRDG 594
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 55/354 (15%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACC 335
+ D+R++ N+Y + L++ + V M G+ + +N L+ A C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
A EI+ E+ KG K DV+T+++++ + + AL + DM+S GV
Sbjct: 471 KEHRIPEAVEIFREMPR---KGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
NT+T+++LINA G +++A L EM+ G + N L++ A + D+A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
F DG+ P+
Sbjct: 587 FEKML-----------RDGHA------------------------------------PSN 599
Query: 516 TTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
+ NIL+ C +A+ EM G +P+ +++ LI+ +G +E L + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
++ +G+ PD V + T + + + A L +E PN T+ LL++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 147/385 (38%), Gaps = 43/385 (11%)
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+S NV L I L++ N H K V+ +M + + ++ +++KA C
Sbjct: 182 FKSYNVVLEI-----LVSGNCH--KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A + ++ + G + V Y T++ + AL++ E+M G P+ T+
Sbjct: 235 SALSL---LRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ +I + +A + ML G P+ L+ + + D A LF + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRI 348
Query: 462 SKTQVAL------GEDYDGNTDRISNMEHKDKQSITNTPNFVP-NSHYSSFDKRF----- 509
K ++ + G G D + S P+ NS + K
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 510 ----------SFKPTTTTYNILMKACCT-----DYYRVKALMNEMRTVGLSPNHISWTIL 554
KP +Y IL+ C + Y V +NEM GL PN + + L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV---LNEMSADGLKPNTVGFNCL 465
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
I A + A++I + M G PDV + + I +K A L +M +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQ 639
N VTY TL+ A R G + E ++
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARK 550
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIY--ED 281
F + F K+ + A+ + + P++Y ++I G+C A++ D
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRD 519
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ V N +N+L+N + ++K ++ M G D +YN L+K C AG
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 340 TVLAQEIYG----------------------------EVKHLEAKGVLK---LDVFTYST 368
A+ ++ E + + VL+ D+ T+++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ A + L + + + G+ P+T+T+++L++ G V A L +E ++ G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 429 CEPNSQCCNILLQACVEACQFDR 451
PN + +ILLQ+ + DR
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 535 LMNEMRTV-GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
LM EMR V P S+ ++++ + A + M + P + + +K
Sbjct: 168 LMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ A SL +M + PN V Y TL+ + S+ ++E Q L
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 218 PRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA 277
P +I + + ++ + ++ A ++ + +P+ C +I+ G+C M A
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN--GLCRSGMVEEA 618
Query: 278 I--YEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ +++ + T +I FNSL+N A ++ L +++ +Q G+ D ++N L+
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 334 CCLAG 338
C G
Sbjct: 679 LCKGG 683
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 32/357 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
++ +NS++N + D L++ + M++ V AD+ +Y+ ++ + C G A ++
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
K +E KG+ K V TY+++V+ A W + +DM+S + PN IT++ L++
Sbjct: 252 ---KEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSK---- 463
G +++A L++EM+ G PN N L+ + A + +K
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 464 --TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
T +L + Y R+ D + + + KR TY+IL
Sbjct: 368 IVTFTSLIKGY-CMVKRVD-----DGMKV-----------FRNISKR-GLVANAVTYSIL 409
Query: 522 MKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C + L EM + G+ P+ +++ IL+D +G +E AL+I + +++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+V YTT I+ + +++ A++LF + ++PN++TY ++ + GSL E
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 56/334 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +YN ++ C +G+T LA ++ ++ +E + V K DVFTYSTI+
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDL---LRKMEERNV-KADVFTYSTIIDSLCRDGC 243
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A+ + ++M + G+ + +T++SL+ AG L ++M+ PN N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
LL V+ + A L+ K+ IT
Sbjct: 304 LLDVFVKEGKLQEANELY------------------------------KEMITR------ 327
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILID 556
P TYN LM C +A +++ M SP+ +++T LI
Sbjct: 328 -----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
V+ +++ + + + G+ + V Y+ ++ +S ++K A LF+EM + + P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 617 NLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
+++TY LL G L ++ L +++D+ K+
Sbjct: 437 DVMTYGILLDGLCDNGKL---EKALEIFEDLQKS 467
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 23/343 (6%)
Query: 267 GIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMA 322
G+C G + + +D+ S+ + N+ FN L++V + L+ E+YK M G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ +YN L+ C+ A + L + D+ T+++++K + K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+KV ++ G+ N +T+S L+ +G ++ A LF+EM+ G P+ ILL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHY 502
+ + ++A +F L K+++ LG T I M K + + N +
Sbjct: 448 LCDNGKLEKALEIFED--LQKSKMDLG--IVMYTTIIEGMCKGGK--VEDAWNL-----F 496
Query: 503 SSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGG 560
S + KP TY +++ C +A L+ +M G +PN ++ LI A
Sbjct: 497 CSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
G++ + ++++ M+ G S D + I + + S L ++F
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDM-LLSGELDKSF 597
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ L + NIY N ++N K F V + KLG D ++N L+K L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G E V + G + DV TY++IV + +AL + M V +
Sbjct: 172 GK---VSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+S++I++ G ++ A+ LF+EM G + + N L++ +A +++ L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL- 286
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
KD S PN + T
Sbjct: 287 ---------------------------KDMVSREIVPNVI-------------------T 300
Query: 518 YNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+N+L+ + L EM T G+SPN I++ L+D + A +L +M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ SPD+V +T+ IK KR+ +F + + N VTY L++ + G +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 636 EVQQCLAVYQDMWKAG 651
++ ++Q+M G
Sbjct: 421 LAEE---LFQEMVSHG 433
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 151/349 (43%), Gaps = 60/349 (17%)
Query: 307 FTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTY 366
L+ K ++ G+ ++ + NI++ C T A + G+V L + D T+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP----DTTTF 161
Query: 367 STIVK-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
+T++K +F + K + A+ + + M+ G P+ +T++S++N +G A+ L +M
Sbjct: 162 NTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 426 QAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ + + + ++ + C + C D A LF+ ME
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKE-----------------------MET 256
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTV 542
K K + TYN L++ C + L+ +M +
Sbjct: 257 K------------------------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
+ PN I++ +L+D G ++ A ++ K M G+SP+++ Y T + RL +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ + M + P++VT+ +L++ Y + V + V++++ K G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKG---YCMVKRVDDGMKVFRNISKRG 398
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 170/398 (42%), Gaps = 59/398 (14%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHD--LKFTL 309
P++ +I++ GIC GD + + + +NV +++ ++++++ D + +
Sbjct: 191 PDVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ + + +YN L++ C AG + +K + ++ ++ +V T++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL---LKDMVSREIVP-NVITFNVL 304
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-C-------ANAGL-------- 413
+ VF Q A ++ ++M++ G++PN IT+++L++ C AN L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 414 -------------------VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
V+ M +F + + G N+ +IL+Q ++ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
LF+ V+ G D T I D + + S D
Sbjct: 425 LFQEM------VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD------LG 472
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
Y +++ C A L + G+ PN +++T++I G++ A +L+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
M EDG +P+ Y T I+ +R L + L EEMK
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 94/344 (27%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV-----------NA 302
PN+ ++DV G ++ +Y+++ ++ ++ NI +N+LM+ N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 303 HDL-----------KFT---------------LEVYKNMQKLGVMADMASYNILLKACCL 336
DL FT ++V++N+ K G++A+ +Y+IL++ C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 337 AGNTVLAQEIYGE-VKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
+G LA+E++ E V H GVL DV TY ++ D + AL++ ED+ + +
Sbjct: 416 SGKIKLAEELFQEMVSH----GVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
+ ++++I G VE A +LF + G +PN +++ L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG------------L 518
Query: 456 FRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
+ +LS+ + L + + DGN P
Sbjct: 519 CKKGSLSEANILLRKMEEDGNA------------------------------------PN 542
Query: 515 TTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILID 556
TYN L++A D L+ EM++ G S + S ++ID
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 263 IDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKL 318
I V G C G + +++++ S V ++ + L++ + L+ LE+++++QK
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
+ + Y +++ C G A ++ L KGV K +V TY+ ++
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFC---SLPCKGV-KPNVMTYTVMISGLCKKGS 523
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M G PN T+++LI A G + + L EEM G ++ +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 439 LLQACVEACQFDRAF 453
++ + + D++F
Sbjct: 584 VIDMLLSG-ELDKSF 597
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 162/384 (42%), Gaps = 56/384 (14%)
Query: 256 MYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVY 312
+Y +I G G + ++ +++ ++ + N+ +N++++ + K + +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
MQ+ GV D ++N LL C G A+ ++ E+ + ++ DVF+Y+T++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR----IEQDVFSYNTLLDA 383
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
+A ++ M + PN +++S++I+ A AG ++A++LF EM G +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITN 492
N LL + + + A + R ++G
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILRE------MASVG----------------------- 474
Query: 493 TPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHIS 550
K TYN L+ Y VK + EM+ + PN ++
Sbjct: 475 ------------------IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 551 WTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
++ LID G + A++I + + G+ DVV Y+ I ++ + A SL +EM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 611 HYQIQPNLVTYITLLRARSRYGSL 634
I PN+VTY +++ A R ++
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATM 600
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 56/384 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG-DYMKSRAIYEDL 282
F + +G+ A+ +++ K++ PN+ +ID CG G ++ + ++++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 283 RSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNT 340
+ V + FNSL+ V + + ++ M + D+ SYN LL A C G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
LA EI + + K ++ +V +YST++ FA A + AL + +M G+ + ++
Sbjct: 391 DLAFEI---LAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+++L++ G E+A+ + EM G + + N LL + ++D ++F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF---- 502
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNI 520
T++ KR P TY+
Sbjct: 503 ---TEM----------------------------------------KREHVLPNLLTYST 519
Query: 521 LMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ Y + E ++ GL + + ++ LIDA +G V A+ ++ M ++G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQA 602
+SP+VV Y + I RS + ++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 168/432 (38%), Gaps = 91/432 (21%)
Query: 225 CNFV-REFGKKRDLVSALRAYDASKKHLSSPNMY--ICRTIIDVCGICGDYMKSRAIYED 281
C ++ RE G + + A+ Y+ + K N + +I G G ++ I+E
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 282 LRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ +Y F++L++ + + V+ +M++ G+ ++ +YN ++ AC G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG- 317
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ + K F ++M GV P+ I
Sbjct: 318 ------------------------MEFKQVAKFF-------------DEMQRNGVQPDRI 340
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SL+ C+ GL E A +LF+EM E + N LL A + Q D AF +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + PN V S T +
Sbjct: 401 PVKRIM----------------------------PNVVSYS---------------TVID 417
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
KA D L EMR +G++ + +S+ L+ G E AL IL+ M G+
Sbjct: 418 GFAKAGRFD--EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
DVV Y + + + + +F EMK + PNL+TY TL+ S+ G L+ ++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK-GGLY--KE 532
Query: 640 CLAVYQDMWKAG 651
+ ++++ AG
Sbjct: 533 AMEIFREFKSAG 544
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 29/306 (9%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEV 311
PN+ T+ID G + ++ ++ ++R + L+ +N+L+++ + L++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+ M +G+ D+ +YN LL G ++++ E+K + VL ++ TYST++
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR---EHVLP-NLLTYSTLID 522
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
++ ++ A+++ + SAG+ + + +S+LI+A GLV A+ L +EM + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE--DYDGN---------TDRIS 480
N N ++ A + DR+ +L + AL + +GN T +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 481 NMEHKD----KQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKA 534
N KD Q ++ H + KP T++ ++ AC C +
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMH------QLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 535 LMNEMR 540
L+ E+R
Sbjct: 697 LLEELR 702
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 62/435 (14%)
Query: 221 DILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
DIL ++RE G +D +L + + +P++Y C I+ G+ + + +
Sbjct: 127 DILIRVYLRE-GMIQD---SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAG 338
++ + + ++ FN L+NV + F Y + M+K G + +YN +L C G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 339 NTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNT 398
A E+ + H+++KGV DV TY+ ++ + + DM + PN
Sbjct: 243 RFKAAIEL---LDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
+T+++LIN +N G V A L EML G PN N L+ + F A ++F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
ME K P+ +Y
Sbjct: 359 -----------------------MEAK------------------------GLTPSEVSY 371
Query: 519 NILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+L+ C ++ + M+ G+ I++T +ID +G ++ A+ +L M +
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
DG+ PD+V Y+ I + R K A + + + PN + Y TL+ R G L E
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y+ M G
Sbjct: 492 A---IRIYEAMILEG 503
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 184/421 (43%), Gaps = 43/421 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ +I+V G + KS + + + I +N++++ +F +E+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ GV AD+ +YN+L+ C + + +++ K ++ + TY+T++
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR----KRMIHPNEVTYNTLIN 306
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F++ +A ++ +MLS G++PN +T+++LI+ + G ++A+ +F M G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE-DYDGNTDRISNMEHKDKQSI 490
+ +LL + +FD A + + + V +G Y G D + D+ +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 491 TNT--------PNFVPNSHY-SSFDK---------------RFSFKPTTTTYNILMKACC 526
P+ V S + F K R P Y+ L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 527 TDYYRVKALMNEMRTV------GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMS 580
R+ L +R G + +H ++ +L+ + +G V A + ++ M DG+
Sbjct: 485 ----RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 581 PDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQC 640
P+ V++ I S +AFS+F+EM P TY +LL+ + G L E ++
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 641 L 641
L
Sbjct: 601 L 601
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 60/437 (13%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYM 273
I+P C + +G + + A +D K P + +++ G+C G
Sbjct: 539 ILPNTVSFDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK--GLCKGGHLR 595
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++ + L + ++ ++N+L+ + +L + ++ M + ++ D +Y L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C G TV+A K EA+G + + Y+ V A W+ + +E M +
Sbjct: 656 SGLCRKGKTVIAILF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR 451
G TP+ +T +++I+ + G +E+ L EM PN NILL +
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 452 AFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF 511
+F L+RS L+ +P+
Sbjct: 773 SFLLYRSIILN--------------------------------GILPDK----------- 789
Query: 512 KPTTTTYNILMKACCTDYYRVK-ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
T +++++ C ++ + ++ G+ + ++ +LI C +G + A +
Sbjct: 790 ---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
+K+M G+S D + V R+ R +++ + EM I P YI L+ R
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 631 YGSLHEVQQCLAVYQDM 647
G +++ V ++M
Sbjct: 907 VG---DIKTAFVVKEEM 920
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 159/420 (37%), Gaps = 82/420 (19%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
+K + PN T+I+ G + + + ++ S ++ N FN+L++ ++ +
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY----------------GE 349
K L+++ M+ G+ SY +LL C LA+ Y G
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 350 VKHLEAKGVLK---------------LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGV 394
+ L G L D+ TYS ++ F ++ A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
+PN I +S+LI C G +++A+ ++E M+ G + N+L+ + +A + A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
R T DG P
Sbjct: 530 FMRCMT-----------SDG------------------------------------ILPN 542
Query: 515 TTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
T +++ L+ +KA + +EM VG P ++ L+ G++ A + LK
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ + D V Y T + +S L +A SLF EM I P+ TY +L+ R G
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 33/342 (9%)
Query: 313 KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV 372
+ M LG D+ + N ++ G ++ E+ + ++ TY+ ++
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTYNILLHG 763
Query: 373 FADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPN 432
++ K + + ++ G+ P+ +T SL+ + ++E + + + + G E +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 433 SQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHK------- 485
N+L+ C + + AF L + ++ ++L +D + N H+
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVK--VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 486 ----DKQSIT-NTPNFVP--NSHYSSFDKRFSFK-----------PTTTTYNILMKAC-- 525
KQ I+ + ++ N D + +F P + +++A
Sbjct: 882 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 526 CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
C L+ M + L P S+T L+ C +GNV AL++ +M G+ D+V+
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRA 627
Y I + AF L+EEMK N TY L+R
Sbjct: 1002 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 57/291 (19%)
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
L+ L++ K GV D ++N+L+ CC G A ++ VK + + G+ LD
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL---VKVMTSLGI-SLDKD 860
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
T +V V +Q + V +M G++P + + LIN G ++ A + EEM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH 484
+ P + + +++A + + D A L R
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLR--------------------------- 953
Query: 485 KDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTV-- 542
F + PT ++ LM CC + ++AL E+R V
Sbjct: 954 --------------------FMLKMKLVPTIASFTTLMHLCCKNGNVIEAL--ELRVVMS 991
Query: 543 --GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
GL + +S+ +LI G++ A ++ + M+ DG + Y I+
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 269 CGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV---NAHDLKFTLEVYKNMQKLGVMADMA 325
CG ++ + + + I F +LM++ N + ++ LE+ M G+ D+
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE-ALELRVVMSNCGLKLDLV 1000
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK-VFADAKWWQMALK 384
SYN+L+ C G+ LA E+Y E+K G L + TY +++ + A + A
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMK---GDGFLA-NATTYKALIRGLLARETAFSGADI 1056
Query: 385 VKEDMLSAG 393
+ +D+L+ G
Sbjct: 1057 ILKDLLARG 1065
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
ALM R +P+ + ILI G ++ +L+I ++M G +P V +
Sbjct: 111 ALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 594 VRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
V+S +S +EM +I P++ T+ L+ GS + + Q M K+G
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEKSG 223
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 172/428 (40%), Gaps = 58/428 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ FC + F K+ ++ A + ++ P++ T+ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ V L++ VF+S ++V + DL VYK M G+ ++ +Y IL+K C G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A +YG++ K ++ + TYS+++ F + + EDM+ G P+ +
Sbjct: 407 IYEAFGMYGQI----LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ + GL+ AM +ML N N L+ +FD A ++FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ + KP T+
Sbjct: 523 GI-----------------------------------------------YGIKPDVATFT 535
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
+M+ + +A L M +GL P+ +++ LIDA LQ+ +M+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+S D+ I + + R++ A F + +++P++VTY T++ Y SL +
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI---CGYCSLRRL 652
Query: 638 QQCLAVYQ 645
+ +++
Sbjct: 653 DEAERIFE 660
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 202/459 (44%), Gaps = 38/459 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
++F + + + K DL +A Y SPN+ + TI+ + G+C G ++ +Y
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYTIL-IKGLCQDGRIYEAFGMY 414
Query: 280 EDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + +I ++SL++ +L+ +Y++M K+G D+ Y +L+ L+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LS 472
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
++ + VK L ++L+V +++++ + + ALKV M G+ P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQS--IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
T+++++ G +E+A+ LF M + G EP++ L+ A + + +LF
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 458 SWTLSKTQVALG------------EDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-- 503
+K + + + +N+ + T N + + S
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 504 ---------SFDKRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWT 552
K F P T T IL+ C D + + M G PN +++
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
L+D S ++EG+ ++ + M+E G+SP +V+Y+ I + R+ +A ++F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 613 QIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ P++V Y L+R + G L E +Y+ M + G
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNG 806
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 145/346 (41%), Gaps = 55/346 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ F +L+N ++ +++K M++ G+ D+ +Y+ L+ AG + +++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ H KGV KLDV +S+ + V+ + A V + ML G++PN +T++ LI
Sbjct: 345 SQALH---KGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + +A ++ ++L+ G EP+ + L+ + F L+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI------- 453
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+ + P Y +L+
Sbjct: 454 ----------------------------------------KMGYPPDVVIYGVLVDGLSK 473
Query: 528 DYYRVKALMNEMRTVGLSP--NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ A+ ++ +G S N + + LID + AL++ ++M G+ PDV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+TT ++V + RL++A LF M ++P+ + Y TL+ A ++
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 174/420 (41%), Gaps = 36/420 (8%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + + F K +L S Y+ K P++ I ++D G + +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q++ LN+ VFNSL++ +F L+V++ M G+ D+A++ +++ + G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++ + + L+ D Y T++ F + L++ + M ++ +
Sbjct: 547 LEEALFLFFRMFKMG----LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ +I+ +E A F +++ EP+ N ++ + D A R+F
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSF------KP 513
++ + NT ++ + H N+ + FS KP
Sbjct: 663 KVTP--------FGPNTVTLTILIHV----------LCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 514 TTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
TY LM + D L EM+ G+SP+ +S++I+ID G V+ A I
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+ + PDVVAY I+ + RL +A L+E M ++P+ + L RA S Y
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL----LQRALSEY 820
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+ + + ++ ID SG++ A + K M G+SP+VV YT IK + R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 603 FSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
F ++ ++ ++P++VTY +L+ + G+L + A+Y+DM K G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL---RSGFALYEDMIKMG 456
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 513 PTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P T+ L+ C + R L M G+ P+ I+++ LID +G + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
G+ DVV +++ I V V+S L A +++ M I PN+VTY L++ +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 631 YGSLHEVQQCLAVYQDMWKAG 651
G ++E +Y + K G
Sbjct: 404 DGRIYEA---FGMYGQILKRG 421
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 510 SFKPTTTTYNILMKACCTDYYRVKA-LMNEMRTVGLSPNHISWTILIDACGGSGNVEGAL 568
F+ + N ++K D V + L++ + G +PN +++ LI+ G ++ A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 569 QILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRAR 628
+ K+M + G+ PD++AY+T I ++ L LF + H ++ ++V + + +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 629 SRYGSLHEVQQCLAVYQDMWKAG 651
+ G L VY+ M G
Sbjct: 367 VKSGDLATAS---VVYKRMLCQG 386
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 37/368 (10%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ Y+ ++ + C + A ++ E
Sbjct: 211 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--- 265
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
++ KG+ + DVFTYS+++ + W A ++ DML + PN +T++SLI+A A G
Sbjct: 266 MDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+ +A LF+EM+Q +PN N L+ C DR + +TL ++ L +
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLING---FCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 473 DGNT---------------DRISNMEHKDKQSITNTPNFVPNSHYSSFD---KRFSFK-- 512
NT + +M + T T + + + + D + FK
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 513 ------PTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNV 564
P TYN L+ C + KA++ ++ + P+ ++ I+ + +G V
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 565 EGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL 624
E + + G+ PDV+AY T I + ++A++LF +MK P+ TY TL
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 625 LRARSRYG 632
+RA R G
Sbjct: 562 IRAHLRDG 569
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 179/414 (43%), Gaps = 36/414 (8%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD ++ LS N + + + + G+ +KSR +I F+ L++ A
Sbjct: 28 SYDGYREKLSR-NALLHLKLDEAVDLFGEMVKSRPFP----------SIVEFSKLLSAIA 76
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + M+ LGV ++ +YNI++ C A I G++ L
Sbjct: 77 KMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--- 133
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
+ T ++++ F A+ + + M+ G P+T+T+++L++ +A+ L
Sbjct: 134 -SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
E M+ GC+P+ ++ + + D A L K + + Y D +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VIYSTVIDSLC 251
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR---VKALMN 537
H D + N ++ D + +P TY+ L+ +C +Y R L++
Sbjct: 252 KYRHVD-----DALNL-----FTEMDNK-GIRPDVFTYSSLI-SCLCNYGRWSDASRLLS 299
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M ++PN +++ LIDA G + A ++ M + + P++V Y + I
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
RL +A +F M P++VTY TL+ + +V + +++DM + G
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLING---FCKAKKVVDGMELFRDMSRRG 410
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 159/404 (39%), Gaps = 55/404 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+++ + K R + AL + P+++ ++I G + + + D
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FNSL++ A + K +++ M + + ++ +YN L+ C+
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
AQ+I+ + +K L DV TY+T++ F AK +++ DM G+ NT+
Sbjct: 361 LDEAQQIF---TLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI+ A + A +F++M+ G PN N LL + + ++A +F
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
SK + P TYN
Sbjct: 477 QKSKME-----------------------------------------------PDIYTYN 489
Query: 520 ILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
I+ + C L + G+ P+ I++ +I G E A + M+ED
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
G PD Y T I+ +R + L +EM+ + + TY
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 151/323 (46%), Gaps = 20/323 (6%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ ++ID G +++ +++++ +++ NI +NSL+N HD L +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M + D+ +YN L+ C A V E++ + + +G++ + TY+T++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF---RDMSRRGLVG-NTVTYTTLI 422
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
F A A V + M+S GV PN +T+++L++ G +E+AM +FE + ++ E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
P+ NI+ + +A + + + LF S +L + D IS K +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMISGFCKKGLKEE 538
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNH 548
T F+ P + TYN L++A D + + L+ EMR+ + +
Sbjct: 539 AYTL-FIKMKEDGPL-------PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 549 ISWTILIDACGGSGNVEGALQIL 571
++ ++ D +G L++L
Sbjct: 591 STYGLVTDMLHDGRLDKGFLEVL 613
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 173/406 (42%), Gaps = 26/406 (6%)
Query: 252 SSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
+ P ++ +ID GD +R ++E+++ + + + +NS+++ L T+
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M+ + D+ +YN L+ C G + E Y E+K G LK +V +YST+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK---GNG-LKPNVVSYSTL 373
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
V F Q A+K DM G+ PN T++SLI+A G + A L EMLQ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ- 488
E N L+ +A + A LF + L Y+ ++ D+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS-YNALIHGFVKAKNMDRAL 492
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSP 546
+ N K KP Y + C+ K +MNEM+ G+
Sbjct: 493 ELLNEL------------KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
N + +T L+DA SGN L +L M+E + VV + I ++K + +A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 607 EEMKH-YQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + + +Q N + ++ + ++V+ +++ M + G
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKD---NQVEAATTLFEQMVQKG 643
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 188/467 (40%), Gaps = 67/467 (14%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ +A ++ K P+ ++ID G G + +E+++ ++
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+N+L+N L LE Y+ M+ G+ ++ SY+ L+ A C G A + Y ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + L + +TY++++ A ++ +ML GV N +T+++LI+ +
Sbjct: 394 RRVG----LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS------------ 458
A +++A LF +M AG PN N L+ V+A DRA L
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 459 -----WTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
W L +V + E + S + + + N H K
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 508 RFSFKPTTTTYNILMKACC--------TDYY---------------------------RV 532
+ T T+ +L+ C DY+ +V
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 533 KA---LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A L +M GL P+ ++T L+D GNV AL + M E GM D++AYT+
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+ +L++A S EEM I P+ V I++L+ G + E
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 52/259 (20%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
P + +L + + G++E+A+ F +M + P ++ CN LL + + D R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPT 514
F K + G +PT
Sbjct: 249 FF------KDMIGAGA-----------------------------------------RPT 261
Query: 515 TTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILK 572
TYNI++ C D + L EM+ GL P+ +++ +ID G G ++ + +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 573 IMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
M++ PDV+ Y I + +L + EMK ++PN+V+Y TL+ A + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 633 SLHEVQQCLAVYQDMWKAG 651
+ QQ + Y DM + G
Sbjct: 382 MM---QQAIKFYVDMRRVG 397
Score = 33.1 bits (74), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
AL +++ M G+ + + ++SL+ ++ +++A EEM+ G P+ C +L+
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Query: 442 ACVEACQFDRAFRL 455
E D A L
Sbjct: 727 KHYELGCIDEAVEL 740
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 87/412 (21%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
P + T++ + G +R I +++S+ ++ +N +++ ++ + + EV +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS-EVLR 316
Query: 314 NMQKLGVMADMASYNILLKACCLAG----------------------------------N 339
M+++G++ D SYNIL++ C G N
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+ A EI ++ + KG++ LD TY+ ++ + + A + ++M++ G+ P
Sbjct: 377 KIEAAEIL--IREIREKGIV-LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T++SLI +A LFE+++ G +P+ N L+ DRAF L +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ S P TYN
Sbjct: 494 DM-----------------------------------------------MSINPDDVTYN 506
Query: 520 ILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRED 577
LM+ C + + + LM EM+ G+ P+HIS+ LI G+ + A + M
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 578 GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
G +P ++ Y +K +++ + A L EMK I PN ++ +++ A S
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 180/442 (40%), Gaps = 40/442 (9%)
Query: 219 RADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAI 278
++ ILF VR + R + A+ + K+ P C I+ + +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 279 YEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCL 336
Y D+ + N+Y FN ++NV LK M+ G+ + +YN L++ L
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 337 AGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTP 396
G A+ I E+K +KG + D+ TY+ I+ + A +V +M G+ P
Sbjct: 273 RGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVP 325
Query: 397 NTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
++++++ LI C+N G +E A +EM++ G P N L+ + + A L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 457 RSWTL------SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH-YSSF---- 505
R S T L Y + D D+ T P Y+S
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM---TDGIQPTQFTYTSLIYVL 442
Query: 506 ---------DKRF------SFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNH 548
D+ F KP N LM C + R +L+ EM + ++P+
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ L+ G G E A +++ M+ G+ PD ++Y T I + K AF + +E
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 609 MKHYQIQPNLVTYITLLRARSR 630
M P L+TY LL+ S+
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSK 584
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 58/326 (17%)
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
Y +M ++ + +++ ++NI++ C G A+ G +E G+ K + TY+T+V+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG---IMEVFGI-KPTIVTYNTLVQ 268
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
F+ + A + +M S G P+ T++ +++ N G +A + EM + G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVP 325
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+S NIL++ C + AF +R + + V
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFA-YRDEMVKQGMV------------------------- 359
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
PT TYN L+ + +++A L+ E+R G+ +
Sbjct: 360 ---------------------PTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLDS 397
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ ILI+ G+ + A + M DG+ P YT+ I V R + ++A LFE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSL 634
+ ++P+LV TL+ G++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNM 483
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 395 TPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFR 454
T +TI + L+ C +V++A+ F M + G P ++ CN +L R R
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL------LSRLNR 205
Query: 455 LFRSWTLSKTQVALGEDYDGNTDRISNM------EHKDKQS-----ITNTPNFVPN-SHY 502
+ +W + + N + M E K K++ I P Y
Sbjct: 206 IENAWVFYADMYRM--EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263
Query: 503 SSFDKRFS-------------------FKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
++ + FS F+P TYN ++ C + R ++ EM+ +G
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG-RASEVLREMKEIG 322
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P+ +S+ ILI C +G++E A M + GM P Y T I +++ A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L E++ I + VTY L+ ++G + ++ A++ +M G
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFALHDEMMTDG 427
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 104/283 (36%), Gaps = 52/283 (18%)
Query: 359 LKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAM 418
+K +V+T++ ++ V + A M G+ P +T+++L+ + G +E A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 419 HLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR 478
+ EM G +P+ Q N +L C RA + R
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSW---MCNEGRASEVLREM------------------- 318
Query: 479 ISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT--DYYRVKALM 536
K P + +YNIL++ C D A
Sbjct: 319 ----------------------------KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 537 NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+EM G+ P ++ LI +E A +++ +RE G+ D V Y I +
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
K+AF+L +EM IQP TY +L+ R E +
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 141/320 (44%), Gaps = 34/320 (10%)
Query: 135 VLKKLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEM-FVGLMEVLEEFRLPVKELDE 193
VL+++ E+G+ P D + +L C ++G++EM F E++++ +P
Sbjct: 314 VLREMKEIGLVP----DSVSYNILIRGCS---NNGDLEMAFAYRDEMVKQGMVPT----- 361
Query: 194 EFRIVQLCVNKPDVNLAIRYACIVPRA---------DILFCNFVREFGKKRDLVSALRAY 244
F ++ + I A I+ R + + + + + D A +
Sbjct: 362 -FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 245 DASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN----V 300
D P + ++I V ++ ++E + + + ++ + N+LM+ +
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
D F+L K M + + D +YN L++ C G A+E+ GE+K +G+ K
Sbjct: 481 GNMDRAFSL--LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR---RGI-K 534
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D +Y+T++ ++ + A V+++MLS G P +T+++L+ + E A L
Sbjct: 535 PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Query: 421 FEEMLQAGCEPN-SQCCNIL 439
EM G PN S C+++
Sbjct: 595 LREMKSEGIVPNDSSFCSVI 614
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEV 311
P++ + T++D G+ ++ ++ +++ ++ + +N LM + KF E+
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
M++ G+ D SYN L+ G+T A + E+ L L TY+ ++K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL----LTYNALLK 580
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
+ + ++A ++ +M S G+ PN ++ S+I A +N
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 23/344 (6%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL L + M+K + AD+ YN ++ C + A +++ +
Sbjct: 221 VINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK--- 275
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ K DVFTY+ ++ + W A ++ DML + P+ + +++LI+A G
Sbjct: 276 METKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 413 LVEQAMHLFEEMLQAG-CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
+ +A L++EM+++ C P+ N L++ + + + +FR +S+ +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE--MSQRGLV---- 388
Query: 472 YDGNTDRISNMEHKDKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
GNT + + H Q+ + V S P TYNIL+ C +
Sbjct: 389 --GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-----GVHPDIMTYNILLDGLCNNGN 441
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
AL+ M+ + + +++T +I+A +G VE + + G+ P+VV YTT
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
+ R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVM 321
D G+ GD +KSR +I F+ L++ A KF L + + MQ LG+
Sbjct: 58 DAIGLFGDMVKSRPFP----------SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
++ +Y+I + C LA I G++ L + T ++++ F
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP----SIVTLNSLLNGFCHGNRISE 163
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+T+T+++L++ +A+ L E M+ GC+P+ ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSH 501
+ + D A L K + + Y+ D + +H D
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADV-VIYNTIIDGLCKYKHMDDA------------- 269
Query: 502 YSSFDKRFS--FKPTTTTYNILMKACCTDYYR---VKALMNEMRTVGLSPNHISWTILID 556
+ F+K + KP TYN L+ +C +Y R L+++M ++P+ + + LID
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 557 ACGGSGNVEGALQIL-KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
A G + A ++ ++++ PDVVAY T IK + KR+++ +F EM +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 616 PNLVTYITLLRA 627
N VTY TL+
Sbjct: 389 GNTVTYTTLIHG 400
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 319 GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKW 378
G D+ +Y ++ C G LA + +++ KG ++ DV Y+TI+ K
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME----KGKIEADVVIYNTIIDGLCKYKH 265
Query: 379 WQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNI 438
A + M + G+ P+ T++ LI+ N G A L +ML+ P+ N
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 439 LLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVP 498
L+ A V+ + A +L+ SK
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCF-------------------------------- 353
Query: 499 NSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMN---EMRTVGLSPNHISWTILI 555
P YN L+K C Y RV+ M EM GL N +++T LI
Sbjct: 354 --------------PDVVAYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 556 DACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQ 615
+ + + A + K M DG+ PD++ Y + + ++ A +FE M+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 616 PNLVTYITLLRARSRYGSLHE 636
++VTY T++ A + G + +
Sbjct: 459 LDIVTYTTMIEALCKAGKVED 479
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYD--ASKKHLSSPNMYICRTIIDVCGICGDYMK--- 274
D++F N + F K+ LV A + YD KH P++ T+I G C Y +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-CFPDVVAYNTLIK--GFC-KYKRVEE 374
Query: 275 SRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLK 332
++ ++ + + N + +L++ A D V+K M GV D+ +YNILL
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 333 ACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSA 392
C GN A ++ ++ K +KLD+ TY+T+++ A + + +
Sbjct: 435 GLCNNGNVETALVVFEYMQ----KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
GV PN +T++++++ GL E+A LF EM + G PNS N L++A
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 24/370 (6%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL + +K ++ I TIID G+C A ++ + ++ + +++ +N L
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIID--GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 298 MNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
++ N + +M + + D+ +N L+ A G V A+++Y E+ +++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM--VKS 349
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K DV Y+T++K F K + ++V +M G+ NT+T+++LI+ A +
Sbjct: 350 KHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A +F++M+ G P+ NILL + A +F + K + L D
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE--YMQKRDMKL--DIVTY 464
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VK 533
T I + K + + + + S + KP TY +M C +
Sbjct: 465 TTMIEALCKAGK--VEDGWDL-----FCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 534 ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVC 593
AL EM+ G PN ++ LI A G+ + +++K MR G + D + +
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM- 575
Query: 594 VRSKRLKQAF 603
+ RL ++F
Sbjct: 576 LHDGRLDKSF 585
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 106/291 (36%), Gaps = 52/291 (17%)
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
+++TYS + F +AL + M+ G P+ +T +SL+N + + +A+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
++M++ G +P++ L+ + + A L + Q
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------------- 212
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
P TY ++ C AL +N+M
Sbjct: 213 -------------------------------PDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + + +ID +++ A + M G+ PDV Y I R
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKA 650
A L +M I P+LV + L+ A + G L E ++ +Y +M K+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK---LYDEMVKS 349
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 513 PTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQI 570
P+ ++ L+ A + V +L +M+ +G+S N +++I I+ + AL I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 571 LKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSR 630
L M + G P +V + + R+ +A +L ++M QP+ VT+ TL+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 631 YGSLHE 636
+ E
Sbjct: 193 HNKASE 198
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 81/435 (18%)
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
++ ++ +N + + L+ + + D +VY +++ G D+ +YN+LL A LA +
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA--LAKD 251
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
Q ++ ++K K + D +TY+ +++ A+ + +M++ G+T N +
Sbjct: 252 EKACQ-VFEDMK----KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDR-------- 451
+++L+ A +V++A+ +F M++ GC PN ++LL V Q R
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 452 ------------------------AFRLF-RSWTLS-----KTQVALGEDYDGNTDRISN 481
A RLF W+ + +++ E G I
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 482 MEH----KDKQSITNTPNFVPNSHYSSFD---------------KRFSFKPTTTTYNILM 522
+E +K +T+T + N+ +S+ K+ P TYNIL+
Sbjct: 427 IEMLSKIHEKGVVTDTMMY--NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 523 KACCTDYYRVKA------LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
+ + RV + E+ P+ IS+ LI+ G +G+V+ A K M+E
Sbjct: 485 AS----FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
G++PDVV Y+T ++ +++R++ A+SLFEEM QPN+VTY LL + G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 637 VQQCLAVYQDMWKAG 651
+ +Y M + G
Sbjct: 601 A---VDLYSKMKQQG 612
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 160/424 (37%), Gaps = 83/424 (19%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN 299
A + ++ KK + Y +I G G ++ ++ ++ ++ +TLN+ +N+LM
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 300 VNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKG 357
V A + ++V+ M + G + +Y++LL G V + K +G
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG 373
Query: 358 VLKLDVFTYSTIVKV------FADAKWWQMALKVKED--------------------MLS 391
+ V T S + V F D W +K + D MLS
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCD--MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 392 ----AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
GV +T+ ++++ +A + LFE+M + G P+ NIL+ +
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
+ D A +F +
Sbjct: 492 EVDEAINIFEEL-----------------------------------------------E 504
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
R KP +YN L+ D EM+ GL+P+ ++++ L++ G + VE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A + + M G P++V Y + ++ R +A L+ +MK + P+ +TY L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 626 RARS 629
R +S
Sbjct: 625 RLQS 628
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 157/397 (39%), Gaps = 68/397 (17%)
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ +M K V ++++ NIL+ GNT Q VK + LK++ FTY ++
Sbjct: 158 ILDSMVKSNVHGNISTVNILIG---FFGNTEDLQMCLRLVKKWD----LKMNSFTYKCLL 210
Query: 371 KVFADAKWWQMAL--------------------------------KVKEDMLSAGVTPNT 398
+ + ++ + A +V EDM +
Sbjct: 211 QAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDE 270
Query: 399 ITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF-- 456
T++ +I G ++A+ LF EM+ G N N L+Q + D+A ++F
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 457 --------RSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT-----------NTPNFV 497
+T S L +G R+ + K+ +T + V
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVA--EGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHV 388
Query: 498 PNSHYSSFDK-RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTIL 554
+H D F K +Y ++++ C ++A +++++ G+ + + + +
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 555 IDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQI 614
A G + + + M++DG SPD+ Y I R + +A ++FEE++
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 615 QPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+P++++Y +L+ + G + E +++M + G
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAH---VRFKEMQEKG 542
Score = 32.7 bits (73), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 520 ILMKACCTDYY-RVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
IL ++ D + RV+++++ M + N + ILI G GN E L+++++
Sbjct: 142 ILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILI---GFFGNTEDLQMCLRLVKKWD 198
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ + Y ++ +RS+ +AF ++ E++ + ++ Y LL A L + +
Sbjct: 199 LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA------LAKDE 252
Query: 639 QCLAVYQDMWK 649
+ V++DM K
Sbjct: 253 KACQVFEDMKK 263
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 55/354 (15%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ ++N+++N DL LEV+ M+K G+ AD +YN L+ +G A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
++ K + +V ++ ++ F A + ++M+ V PN T++SLIN
Sbjct: 243 RDM----VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
G + A ++F+ M+ GC P+ N L+ ++ + + +LF T Q
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGL 355
Query: 468 LGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCT 527
+G+ + TYN L+ C
Sbjct: 356 VGDAF--------------------------------------------TYNTLIHGYCQ 371
Query: 528 --DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVA 585
+ + N M G+SP+ +++ IL+D +G +E AL +++ +++ M D++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 586 YTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
Y I+ R+ +LK+A+ LF + ++P+ + YIT++ R G E +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 37/373 (9%)
Query: 294 FNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F ++ V A KF + +Y M+ LG+ D+ S+ IL+ C LA + G++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CAN 410
L + + T +++ F +Q A+ + + M G PN + ++++IN C N
Sbjct: 142 KLG----FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ----- 465
L A+ +F M + G ++ N L+ + ++ A RL R K
Sbjct: 198 RDL-NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 466 -VALGEDY--DGNTDRISNMEHKDKQSITNTPN-FVPNSHYSSF-------DKRFSFK-- 512
AL + + +GN N+ +K+ + PN F NS + F D ++ F
Sbjct: 257 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 513 ------PTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGN 563
P TYN L+ C RV+ L EM GL + ++ LI +G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 564 VEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYIT 623
+ A ++ M + G+SPD+V Y + + ++++A + E+++ ++ +++TY
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 624 LLRARSRYGSLHE 636
+++ R L E
Sbjct: 435 IIQGLCRTDKLKE 447
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 138 KLNELGVAPLELFDGSGFKLLKNECQRLLDSGEVEMFVGLMEVLEEFRLPVKELDEEFRI 197
K+ +LG P + GS LL CQ + V L++ ++ F + I
Sbjct: 139 KMMKLGFRPSIVTLGS---LLNGFCQ----GNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 198 VQLCVNKPDVNLAIR-YACIVP---RADILFCNFV----REFGKKRDLVSALRAYDASKK 249
LC N+ D+N A+ + C+ RAD + N + G+ D LR D K+
Sbjct: 192 NGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR--DMVKR 248
Query: 250 HLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAH----D 304
+ PN+ +ID G+ +++R +Y+++ ++V N++ +NSL+N H D
Sbjct: 249 KID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 305 LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVF 364
K+ ++ M G D+ +YN L+ C + +++ E+ + G D F
Sbjct: 308 AKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG----DAF 360
Query: 365 TYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEM 424
TY+T++ + A +A KV M+ GV+P+ +T++ L++ N G +E+A+ + E++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 425 LQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
++ + + NI++Q + A+ LFRS T
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ F+P+ T L+ C + +L++ M G PN + + +I+ + ++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
AL++ M + G+ D V Y T I S R A L +M +I PN++ + L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 626 RARSRYGSLHEVQQCLAVYQDMWK 649
+ G+L E + +Y++M +
Sbjct: 262 DTFVKEGNLLEARN---LYKEMIR 282
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
I F + F K+ +L+ A Y + PN++ ++I+ I G ++ +++
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ S+ ++ +N+L+ + ++ ++++ M G++ D +YN L+ C AG
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
+AQ+++ + + D+ TY+ ++ + + AL + ED+ + + + I
Sbjct: 375 LNVAQKVFNRM----VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNS 433
T++ +I +++A LF + + G +P++
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 509 FSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
F F P YN ++ C D + M G+ + +++ LI SG
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 567 ALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLR 626
A ++L+ M + + P+V+ +T I V+ L +A +L++EM + PN+ TY +L+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 627 ARSRYGSLHEVQ 638
+G L + +
Sbjct: 298 GFCIHGCLGDAK 309
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 535 LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCV 594
L ++M +G+S + S+TILI + AL +L M + G P +V + +
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 595 RSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ R ++A SL + M + PN+V Y T++ + ++ L V+ M K G
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN---RDLNNALEVFYCMEKKG 214
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 171/404 (42%), Gaps = 55/404 (13%)
Query: 233 KKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIY 292
K+ D+ AL +K ++ I TIID + + ++ ++ ++ + N+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 293 VFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEV 350
+NSL+ N + +M + + ++ +++ L+ A G V A+++Y E+
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 351 KHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACAN 410
K + D+FTYS+++ F A + E M+S PN +T+++LI
Sbjct: 352 ----IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 411 AGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE 470
A VE+ M LF EM Q G N+ N L+Q +A D A ++F+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---------- 457
Query: 471 DYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY 530
DG VP P TY+IL+ C
Sbjct: 458 -SDG----------------------VP--------------PDIITYSILLDGLCKYGK 480
Query: 531 RVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTT 588
KAL+ ++ + P+ ++ I+I+ +G VE + + G+ P+V+ YTT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 589 AIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
I R ++A +LF EMK PN TY TL+RAR R G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 179/404 (44%), Gaps = 62/404 (15%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTL 309
P+++ T+++ G+C GD + ++ + + + ++ ++ ++++ N ++ L
Sbjct: 218 PDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G+ ++ +YN L++ C G A + ++ +E K + +V T+S +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERK--INPNVVTFSAL 331
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F A K+ ++M+ + P+ T+SSLIN +++A H+FE M+ C
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
PN N L++ +A + + LFR E +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFR-------------------------EMSQRGL 426
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC--CTDYYRVKALMNEMRTVGLSPN 547
+ NT TYN L++ D + + +M + G+ P+
Sbjct: 427 VGNT----------------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
I+++IL+D G +E AL + + +++ M PD+ Y I+ ++ +++ + LF
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ ++PN++ Y T++ R G E A++++M + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEAD---ALFREMKEDG 565
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 173/388 (44%), Gaps = 57/388 (14%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEV 311
PN T+I + ++ A+ + + ++ +++ + +++N D+ L +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
K M+K + AD+ Y ++ A C N A ++ E ++ KG+ + +V TY+++++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE---MDNKGI-RPNVVTYNSLIR 298
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ W A ++ DM+ + PN +T+S+LI+A G + +A L++EM++ +P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 432 NSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
+ + L+ + D A +F ++ + +D
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMF--------ELMISKD-------------------- 390
Query: 492 NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA---LMNEMRTVGLSPNH 548
F P TYN L+K C RV+ L EM GL N
Sbjct: 391 ------------------CF-PNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNT 430
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEE 608
+++ LI +G+ + A +I K M DG+ PD++ Y+ + + +L++A +FE
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 609 MKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ +++P++ TY ++ + G + +
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 185/438 (42%), Gaps = 50/438 (11%)
Query: 243 AYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNA 302
+YD +K S N+ + + D + G+ ++SR + +I FN L++ A
Sbjct: 44 SYDYREKL--SRNVLLDLKLDDAVDLFGEMVQSRPLP----------SIVEFNKLLSAIA 91
Query: 303 HDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
KF L + + MQ L + D+ SYNIL+ C LA + G++ L +
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--- 148
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
D+ T S+++ + K A+ + + M PNT+T+++LI+ +A+ L
Sbjct: 149 -DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGE---------D 471
+ M+ GC+P+ ++ + D A L + K + + +
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVP-NS---------HYSSFDKRFS------FKPTT 515
Y D ++ D + I PN V NS +S + S P
Sbjct: 268 YKNVNDALNLFTEMDNKGIR--PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
T++ L+ A + V+A L +EM + P+ +++ LI+ ++ A + ++
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M P+VV Y T IK ++KR+++ LF EM + N VTY TL++ + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 634 LHEVQQCLAVYQDMWKAG 651
Q+ +++ M G
Sbjct: 446 CDMAQK---IFKKMVSDG 460
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 62/358 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHDLKFTLEV 311
+PN+ +ID G +++ +Y+++ +++ +I+ ++SL+N HD L+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---RLDE 378
Query: 312 YKNMQKLGVMAD----MASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
K+M +L + D + +YN L+K C A E++ E+ G + TY+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----NTVTYN 434
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
T+++ A MA K+ + M+S GV P+ IT+S L++ G +E+A+ +FE + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 428 GCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
EP+ NI+++ +A + + + LF S +L
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK------------------------- 529
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLS 545
KP Y ++ C + AL EM+ G
Sbjct: 530 ----------------------GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
PN ++ LI A G+ + +++K MR G D + I + + RL++++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 149/365 (40%), Gaps = 63/365 (17%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EV 311
PN+ ++I G + + + D+ + + N+ F++L++ + K ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK---LDVFTYST 368
Y M K + D+ +Y+ L+ C+ + E KH+ + K +V TY+T
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCM-------HDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K F AK + +++ +M G+ NT+T+++LI AG + A +F++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ +ILL + + ++A +F SK +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----------------------- 497
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLS 545
P TYNI+++ C +V+ L + G+
Sbjct: 498 ------------------------PDIYTYNIMIEGMCK-AGKVEDGWDLFCSLSLKGVK 532
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN I +T +I G E A + + M+EDG P+ Y T I+ +R + L
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 606 FEEMK 610
+EM+
Sbjct: 593 IKEMR 597
>sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein At4g34830,
chloroplastic OS=Arabidopsis thaliana
GN=At4g34830/At4g34820 PE=2 SV=2
Length = 1089
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 255 NMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV----NAHDLKFTLE 310
N++ +ID C G K+ Y LRS+NV + VFN+L++ A D F +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+ + D S L+KACC AG A+E+Y + +G ++ Y+ V
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAV 651
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+ + W A + +DM VTP+ + +S+LI+ +A ++++A + ++ G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 431 PNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSI 490
+ + L+ AC A + +A L+
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKI------------------------------- 740
Query: 491 TNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNH 548
K +PT +T N L+ A C KA+ ++E++T+GL PN
Sbjct: 741 ----------------KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 549 ISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
I++++L+ A + E + ++L + DG+SP+++ +C R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 274 KSRAIYEDLRSQNVTLN--IYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNI 329
K RA+ E R + LN + FN LM+V ++ D++ V + +Q+ G+ AD Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 330 LLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDM 389
L+ +C +G E++ H + ++ ++ T+ ++ A A A +
Sbjct: 508 LISSCAKSGKVDAMFEVF----HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 390 LSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA--GCEPNSQCCNILLQACVEAC 447
S V P+ + +++LI+AC +G V++A + EM +P+ L++AC A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
Q +RA +++ M HK
Sbjct: 624 QVERAKEVYQ------------------------MIHK---------------------- 637
Query: 508 RFSFKPTTTTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+ + T Y I + +C D+ ++ +M+ ++P+ + ++ LID G + ++
Sbjct: 638 -YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A IL+ + G+ ++Y++ + C +K K+A L+E++K +++P + T L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 626 RA 627
A
Sbjct: 757 TA 758
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
K +L + T++ ++ V A ++ + A V + +G+T + +++LI++CA +G V+
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
+F +M +G E N L+ C A Q +AF +
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY------------------- 560
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYY--RVK 533
I + N KP +N L+ AC R
Sbjct: 561 -------------GILRSKNV---------------KPDRVVFNALISACGQSGAVDRAF 592
Query: 534 ALMNEMR--TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIK 591
++ EM+ T + P+HIS L+ AC +G VE A ++ +++ + G+ YT A+
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 592 VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
C +S A S++++MK + P+ V + L+ G + + + QD G
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFGILQDAKSQG 709
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 242 RAYDA-----SKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNS 296
RA+D ++ H P+ ++ C G +++ +Y+ + + V+
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 297 LMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+N + D F +YK+M++ V D ++ L+ +AG+ + E +G ++ +
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---VAGHAKMLDEAFGILQDAK 706
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
++G+ +L +YS+++ +AK W+ AL++ E + S + P T ++LI A +
Sbjct: 707 SQGI-RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+AM +E+ G +PN+ ++L+ A F+ +F+L
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 393 GVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRA 452
G TPN I++++L+ + G A +F M +G EP++ I+L+ VE +F A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 453 FRLFRSWTLSKTQVALGEDYD------------GNTDR----ISNMEHKDKQSITNTPNF 496
+F + L + + L D GN ++ S+M K T T N
Sbjct: 229 EEVFET-LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 497 VPN--SHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSP 546
+ + + Y K R +P +Y +L+KA +AL EM G+ P
Sbjct: 288 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
H ++ IL+DA SG VE A + K MR D + PD+ +YTT + V + ++ A F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +K +PN+VTY TL++ Y ++V++ + VY+ M +G
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 449
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 171/409 (41%), Gaps = 40/409 (9%)
Query: 211 IRYACIVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG 270
+RY ++I F + +GK + A R K S+PN+ +++ G G
Sbjct: 129 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 188
Query: 271 DYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM---QKLGVMADMA 325
+ AI+ ++S + + ++ V K EV++ + +K + D
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 326 SYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKV 385
Y++++ AGN A++++ + KGV + V TY++++ ++ K+
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFS---SMVGKGVPQSTV-TYNSLMSFETS---YKEVSKI 301
Query: 386 KEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVE 445
+ M + + P+ ++++ LI A A E+A+ +FEEML AG P + NILL A
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 446 ACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT-PNFVPNSHYSS 504
+ ++A +F+S DRI D S T +V S
Sbjct: 362 SGMVEQAKTVFKSM---------------RRDRI----FPDLWSYTTMLSAYVNASDMEG 402
Query: 505 FDKRF------SFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILID 556
+K F F+P TY L+K A D ++ + +MR G+ N T ++D
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
A G N AL K M G+ PD A + + L++A L
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 162/397 (40%), Gaps = 64/397 (16%)
Query: 262 IIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLG 319
+I G G++ + + L T N+ + +LM K +++ MQ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWW 379
+Y I+LK A+E++ E E K LK D Y ++ ++ A +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVF-ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 380 QMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNIL 439
+ A KV M+ GV +T+T++SL++ + ++ ++++M ++ +P+ +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 440 LQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPN 499
++A A + + A +F E D
Sbjct: 321 IKAYGRARREEEALSVFE------------EMLDAGV----------------------- 345
Query: 500 SHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDA 557
+PT YNIL+ A + K + MR + P+ S+T ++ A
Sbjct: 346 ------------RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 558 CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPN 617
+ ++EGA + K ++ DG P++V Y T IK ++ +++ ++E+M+ I+ N
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 618 LVTYITLLRARSR---YGSLHEVQQCLAVYQDMWKAG 651
T++ A R +GS L Y++M G
Sbjct: 454 QTILTTIMDASGRCKNFGS------ALGWYKEMESCG 484
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ I + +LI A G GN GA ++L ++ + G +P+V++YT ++ R + A ++F
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQD 646
M+ +P+ +TY +L+ E ++ D
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 36/379 (9%)
Query: 289 LNIYVFNSLMNVNAHDLKFTL-----EVYKNMQKLGVMADMASYNILLKACCLAGNTVLA 343
L I +N+L+N A +F L +VY M + V ++ +YN ++ C GN A
Sbjct: 181 LIIGCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 344 QEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSS 403
+ ++ + L D FTY++++ + K A KV +M G N + ++
Sbjct: 238 NQYVSKI----VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 404 LINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR------ 457
LI+ A +++AM LF +M C P + +L+++ + + A L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 458 ------SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYS-------- 503
++T+ + ++ + + M K T N + N +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 504 ---SFDKRFSFKPTTTTYNILMKACC-TDYYRVKALMNEMRTVGLSPNHISWTILIDACG 559
+ P T TYN L+K C ++ ++ ++N+M + P+ +++ LID
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 560 GSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLV 619
SGN + A ++L +M + G+ PD YT+ I +SKR+++A LF+ ++ + PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 620 TYITLLRARSRYGSLHEVQ 638
Y L+ + G + E
Sbjct: 534 MYTALIDGYCKAGKVDEAH 552
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 53/410 (12%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAI--YEDLRSQNVTLNIYVFNSLMN----VNAHDLKF 307
PN+ +I+ G C M A+ E + S+ ++ N +N L+ N H
Sbjct: 391 PNVITYNALIN--GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK--- 445
Query: 308 TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYS 367
+ V M + V+ D+ +YN L+ C +GN A Y + + +G++ D +TY+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVP-DQWTYT 501
Query: 368 TIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQA 427
+++ +K + A + + + GV PN + +++LI+ AG V++A + E+ML
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 428 GCEPNSQCCNILLQA-CVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKD 486
C PNS N L+ C + +L + L + V +G +TD I + H+
Sbjct: 562 NCLPNSLTFNALIHGLCADG-------KLKEATLLEEKMVKIGLQPTVSTDTI--LIHR- 611
Query: 487 KQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTV 542
+ +F + YS F + S KP TY ++ C + + A +M +MR
Sbjct: 612 ---LLKDGDF--DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 543 GLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQA 602
G+SP+ +++ LI G G A +LK MR+ G P + + IK + K KQ
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 603 FS------------------LFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
S L E+M + + PN +Y L+ G+L
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 43/373 (11%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
L + K M++ G+ ++ +Y +L+ + C A+E+ G++ LE KG++ +V TY+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LE-KGLMP-NVITYNA 398
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ + + A+ V E M S ++PNT T++ LI + V +AM + +ML+
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFR----------SWTLSKTQVAL--GEDYDGNT 476
P+ N L+ + FD A+RL WT + +L + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 477 DRISNMEHKDKQSITNTPNFV--------------PNSHYSSFDKRFSFK--PTTTTYNI 520
D ++E K PN V + + +K S P + T+N
Sbjct: 518 DLFDSLEQKGVN-----PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 521 LMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
L+ C D +A L +M +GL P + TILI G+ + A + M G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PD YTT I+ R RL A + +M+ + P+L TY +L++ YG L +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTN 689
Query: 639 QCLAVYQDMWKAG 651
V + M G
Sbjct: 690 FAFDVLKRMRDTG 702
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 184/446 (41%), Gaps = 56/446 (12%)
Query: 253 SPNMYICRTIIDVCGIC-GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TL 309
SPN +I G C + K+ + + + V ++ +NSL++ F
Sbjct: 425 SPNTRTYNELIK--GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
+ M G++ D +Y ++ + C + A +++ LE KGV +V Y+ +
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGV-NPNVVMYTAL 538
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ + A A + E MLS PN++T+++LI+ G +++A L E+M++ G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ------VALGEDY--DGNTDRISN 481
+P IL+ ++ FD A+ F+ S T+ + Y +G +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 482 MEHKDKQSITNTPNFVPNSHYSSF----DKRFSF-----------KPTTTTYNILMK--- 523
M K +++ + F +S + F+F +P+ T+ L+K
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 524 ------------ACCT-----DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEG 566
C ++ V L+ +M ++PN S+ LI GN+
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 567 ALQILKIM-REDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A ++ M R +G+SP + + + C + K+ +A + ++M P L + L+
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G E ++ +V+Q++ + G
Sbjct: 839 CGLYKKG---EKERGTSVFQNLLQCG 861
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 506 DKRFS--FKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLS-------PNHISWTILID 556
D+RF +K YN L+ + L++EM+ V + PN ++ +++
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLAR-----FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 557 ACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQP 616
GNVE A Q + + E G+ PD YT+ I + K L AF +F EM +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 617 NLVTYITLLRA 627
N V Y L+
Sbjct: 287 NEVAYTHLIHG 297
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 304 DLKFTLEVYKNMQK-LGVMADMASYNILLKACCL------AGNTVLAQEIYGEVKHLEAK 356
+L+ +V+ +MQ+ G+ +N LL CC A V G + LE+
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 357 GVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQ 416
VL I ++ + + V +++L G + + W +I+ GLVE
Sbjct: 835 KVL---------ICGLYKKGEK-ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884
Query: 417 AMHLFEEMLQAGCEPNSQCCNILLQA 442
LF M + GC+ +SQ ++L++
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 36/390 (9%)
Query: 290 NIYVFNSLMNVNAHDLKFTLEVY--KNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
+I+ FN L++ A KF L + + MQ+LG+ ++ +YNIL+ C LA +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
G++ L + + T S+++ + K A+ + + M+ G P+TIT+++LI+
Sbjct: 69 GKMMKLGYEP----SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVA 467
+A+ L + M+Q GC+PN +++ + D AF L +K +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 468 LGEDYDGNTDRISNMEH--------KDKQSITNTPNFVPNS----------HYSSFDKRF 509
+ ++ D + H K+ ++ PN V S +S +
Sbjct: 185 V-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 510 S------FKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGS 561
S P T+N L+ A + + + L ++M + P+ ++ LI+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
++ A Q+ + M PD+ Y T IK +SKR++ LF EM H + + VTY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
TL++ G Q+ V++ M G
Sbjct: 364 TTLIQGLFHDGDCDNAQK---VFKQMVSDG 390
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 148 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 261
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SLIN +++A +FE M+ C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 378
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 379 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK P+ TY TL+RA R G
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 166/359 (46%), Gaps = 19/359 (5%)
Query: 293 VFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKH 352
V N L DL F L M+ + AD+ +N ++ + C + A ++ K
Sbjct: 156 VVNGLCKRGDIDLAFNL--LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KE 210
Query: 353 LEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAG 412
+E KG+ + +V TYS+++ W A ++ DM+ + PN +T+++LI+A G
Sbjct: 211 METKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 413 LVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDY 472
+A L ++M++ +P+ N L+ + D+A ++F + +SK D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFP---DL 325
Query: 473 DGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRV 532
D I K K+ T F SH ++ TT + C + +V
Sbjct: 326 DTYNTLIKGF-CKSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV 382
Query: 533 KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
+M + G+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+
Sbjct: 383 ---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
++ ++ + LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 495
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 88/361 (24%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +++D+ +++ +I+ +NSL+N HD L +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 367
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 368 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 459
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPNHI 549
KP TYN ++ C+ K L+ E
Sbjct: 460 --------------------GVKPNVVTYNTMISGLCS-----KRLLQE----------- 483
Query: 550 SWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
A +LK M+EDG PD Y T I+ +R + L EM
Sbjct: 484 -----------------AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 610 K 610
+
Sbjct: 527 R 527
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 59/386 (15%)
Query: 270 GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASY 327
G+Y++S + E + + ++ + L+ ++ + V + ++K G D+ +Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 328 NILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKE 387
N L+ C A + ++ + D TY+ ++ +ALKV
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKD----FSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 388 DMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEAC 447
+LS P IT++ LI A G V++A+ L +EML G +P+ N +++ +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 448 QFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
DRAF + R+ L +
Sbjct: 278 MVDRAFEMVRNLELKGCE------------------------------------------ 295
Query: 508 RFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
P +YNIL++A + + LM +M + PN ++++ILI G +E
Sbjct: 296 -----PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+ +LK+M+E G++PD +Y I R RL A E M P++V Y T+L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 626 RARSRYGSLHEVQQCLAVYQDMWKAG 651
+ G + Q L ++ + + G
Sbjct: 411 ATLCKNG---KADQALEIFGKLGEVG 433
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 187/473 (39%), Gaps = 99/473 (20%)
Query: 221 DILFCN-FVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICG--------- 270
D++ C ++ F R++ A+R + +K P+++ +I+ G C
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVFAYNALIN--GFCKMNRIDDATR 179
Query: 271 --DYMKSRAIYEDLRSQNVT-----------LNIYVFNSLMNVNAHDLKFT--------- 308
D M+S+ D + N+ L + V N L++ N T
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 309 --------LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
L++ M G+ DM +YN +++ C G A E+ V++LE KG +
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGC-E 295
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV +Y+ +++ + W+ K+ M S PN +T+S LI G +E+AM+L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
+ M + G P++ + L+ A F R RL + +T ++ G
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAA------FCREGRLDVAIEFLETMISDG----------- 398
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNE 538
P YN ++ C + +AL +
Sbjct: 399 ------------------------------CLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
+ VG SPN S+ + A SG+ AL ++ M +G+ PD + Y + I R
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ +AF L +M+ + P++VTY +L + H ++ + V + M G
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLG---FCKAHRIEDAINVLESMVGNG 538
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 31/351 (8%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTLNIYVFNSL 297
AL+ D P+M+ TII G+C + M RA + +L + ++ +N L
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIR--GMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 298 MNVNAHDLKFTLEVYKNMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLE 354
+ + K+ E K M K+ ++ +Y+IL+ C G +E +K ++
Sbjct: 305 LRALLNQGKWE-EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI---EEAMNLLKLMK 360
Query: 355 AKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLV 414
KG L D ++Y ++ F +A++ E M+S G P+ + +++++ G
Sbjct: 361 EKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 415 EQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDG 474
+QA+ +F ++ + GC PNS N + A + RA + ++ G D D
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM------MSNGIDPD- 472
Query: 475 NTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-SFKPTTTTYNILMKACCTDYYRVK 533
+ + S V + D R F P+ TYNI++ C +R++
Sbjct: 473 ------EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK-AHRIE 525
Query: 534 ALMNEMRTV---GLSPNHISWTILIDACGGSGNVEGALQILK-IMREDGMS 580
+N + ++ G PN ++T+LI+ G +G A+++ ++R D +S
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 407 ACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQV 466
+C + +E ++HL E M++ G P+ C L++ +A R+ L K
Sbjct: 99 SCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME--ILEKFGQ 155
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKA 524
Y+ + M D + D+ S F P T TYNI++ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDAT-------------RVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 525 CCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPD 582
C+ AL +N++ + P I++TILI+A G V+ AL+++ M G+ PD
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 583 VVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
+ Y T I+ + + +AF + ++ +P++++Y LLRA G E ++ +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 53/313 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G + +YN L+ + A A ++ +++ + K D TY T++ + A
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ----EAGCKPDRVTYCTLIDIHA 445
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
A + +A+ + + M + G++P+T T+S +IN AG + A LF EM+ GC PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
NI++ +A + A +L+R D Q+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR----------------------------DMQNA---- 533
Query: 495 NFVPNSHYSSFDKRFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWT 552
F+P TY+I+M+ C +A+ EM+ P+ +
Sbjct: 534 ---------------GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 553 ILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHY 612
+L+D G +GNVE A Q + M G+ P+V + + +R ++ +A+ L + M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 613 QIQPNLVTYITLL 625
++P+L TY LL
Sbjct: 639 GLRPSLQTYTLLL 651
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 32/335 (9%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
+Q LG+ D N +LK GN + G L+ + K D TY+T+V
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNAL------GFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
AK + K+ ++M+ G PNT+T++ LI++ A + +AM++F +M +AGC+P+
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 435 CCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTP 494
L+ +A D A ++ + A G D T + I N
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMY------QRMQAGGLSPDTFTYSV----------IINC- 478
Query: 495 NFVPNSHYSSFDKRF------SFKPTTTTYNILM--KACCTDYYRVKALMNEMRTVGLSP 546
H + K F P TYNI+M A +Y L +M+ G P
Sbjct: 479 -LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++++I+++ G G +E A + M++ PD Y + + ++ +++A+ +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 607 EEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
+ M H ++PN+ T +LL R + E + L
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ +C + K L A+ Y + SP+ + II+ G G + ++ +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 282 LRSQNVTLNIYVFNSLMNVNA--HDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ Q T N+ +N +M+++A + + L++Y++MQ G D +Y+I+++ G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A+ ++ E ++ K + D Y +V ++ A + A + + ML AG+ PN
Sbjct: 555 LEEAEAVFTE---MQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA-CQFDRAF 453
T +SL++ + +A L + ML G P+ Q +LL C + + D F
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 512 KPTTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQ 569
+P T TYN L+ + Y +A+ N+M+ G P+ +++ LID +G ++ A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 570 ILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITL--LRA 627
+ + M+ G+SPD Y+ I ++ L A LF EM PNLVTY + L A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 628 RSRYGSLHEVQQCLAVYQDMWKAG 651
++R Q L +Y+DM AG
Sbjct: 516 KAR-----NYQNALKLYRDMQNAG 534
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G+ L A+ ++ ++ P+ T+ID+ G + +Y+
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 282 LRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+++ ++ + + ++ ++N A L +++ M G ++ +YNI++ A N
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A ++Y ++++ + D TYS +++V + + A V +M P+
Sbjct: 520 YQNALKLYRDMQN----AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
+ L++ AG VE+A ++ ML AG PN CN LL F R ++ ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST------FLRVNKIAEAY 629
Query: 460 TLSKTQVALG 469
L + +ALG
Sbjct: 630 ELLQNMLALG 639
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ V G+ + + + D + PN +I G ++ ++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 284 SQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTV 341
+ + +L++++A L +++Y+ MQ G+ D +Y++++ AG+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
A +++ E + +G ++ TY+ ++ + A A+ +Q ALK+ DM +AG P+ +T+
Sbjct: 487 AAHKLFCE---MVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRS 458
S ++ + G +E+A +F EM Q P+ +L+ +A ++A++ +++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 56/252 (22%)
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++++ A L +EM++ GC+PN+ N L+ + A + A +F
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF--- 422
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY- 518
++ Q A KP TY
Sbjct: 423 --NQMQEA------------------------------------------GCKPDRVTYC 438
Query: 519 ---NILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
+I KA D + M+ GLSP+ +++++I+ G +G++ A ++ M
Sbjct: 439 TLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLH 635
+ G +P++V Y + + +++ + A L+ +M++ +P+ VTY ++ G L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 636 EVQQCLAVYQDM 647
E + AV+ +M
Sbjct: 557 EAE---AVFTEM 565
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
R G + ++T ++ G + ++L M DG P+ V Y I R+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A ++F +M+ +P+ VTY TL+ ++ G L + +YQ M G
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL---DIAMDMYQRMQAGG 464
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 562 GNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTY 621
GN G LK R+ G D YTT + R+K+ L +EM QPN VTY
Sbjct: 345 GNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 622 ITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
L+ + YG + + + + V+ M +AG
Sbjct: 403 NRLIHS---YGRANYLNEAMNVFNQMQEAG 429
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 294 FNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVK 351
F L+NV A KF + + ++Q +GV D+ + N+L+ C + LA G++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
L + D+ T+++++ F + A+ + M+ G+ P+ + ++++I++
Sbjct: 135 KLG----FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGED 471
G V A+ LF++M G P+ L+ + ++ A L R T K
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK-------- 242
Query: 472 YDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--Y 529
KP T+N L+ A + +
Sbjct: 243 ---------------------------------------IKPDVITFNALIDAFVKEGKF 263
Query: 530 YRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+ L NEM + ++PN ++T LI+ G V+ A Q+ +M G PDVVAYT+
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
I + K++ A +F EM + N +TY TL++ + G + Q+ +
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 22/343 (6%)
Query: 301 NAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLK 360
N H + + L ++ M+ G+ D+ Y L+ C +G A + + K +K
Sbjct: 190 NGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIK 244
Query: 361 LDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHL 420
DV T++ ++ F + A ++ +M+ + PN T++SLIN G V++A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 421 FEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRIS 480
F M GC P+ L+ + + D A ++F + +S+ + GNT +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF--YEMSQKGLT------GNTITYT 356
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM---- 536
+ Q PN V +S R P TYN+L+ C + KALM
Sbjct: 357 TLIQGFGQ--VGKPN-VAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 537 -NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
+ G++PN ++ +L+ +G +E AL + + MR+ M ++ YT I+ +
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ ++K A +LF + ++PN+VTY T++ R G HE
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 56/395 (14%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIY 279
+++ + K + AL +D + + P++ + ++++ G+C G + + ++
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADSLL 235
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACCLA 337
+ + + ++ FN+L++ + KF E+Y M ++ + ++ +Y L+ C+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
G A++++ +E KG DV Y++++ F K A+K+ +M G+T N
Sbjct: 296 GCVDEARQMF---YLMETKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
TIT+++LI G A +F M+ G PN + N+LL + +A +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 458 SWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTT 517
+M+ ++ + P T
Sbjct: 412 -----------------------DMQKREMDGVA---------------------PNIWT 427
Query: 518 YNILMKACCTDYYRVKALM--NEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR 575
YN+L+ C + KALM +MR + I++TI+I +G V+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 576 EDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
G+ P+VV YTT I R +A LF +MK
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 42/385 (10%)
Query: 280 EDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLA 337
+ L+ V+ ++Y N LMN + L M KLG D+ ++ L+ CL
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL- 154
Query: 338 GNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPN 397
GN + +E V + G+ K DV Y+TI+ AL + + M + G+ P+
Sbjct: 155 GNRM--EEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 398 TITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFR 457
+ ++SL+N N+G A L M + +P+ N L+ A V+ +F A L+
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 458 SW--------TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF 509
+ T + G +G D M + + +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM-------------------FYLMETKG 312
Query: 510 SFKPTTTTYNILMKA-C-CTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGA 567
F P Y L+ C C + EM GL+ N I++T LI G G A
Sbjct: 313 CF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 568 LQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQ---IQPNLVTYITL 624
++ M G+ P++ Y + + ++K+A +FE+M+ + + PN+ TY L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 625 LRARSRYGSLHEVQQCLAVYQDMWK 649
L G L ++ L V++DM K
Sbjct: 432 LHGLCYNGKL---EKALMVFEDMRK 453
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y I++ + + AL + M+ + P+ I ++ L+N A + ++L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN--ME 483
G + CN+L+ CQ + + L S+ ++ D T I+ +
Sbjct: 100 IMGVSHDLYTCNLLMNC---FCQSSQPY-LASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEMRT 541
++ +++++ V KP Y ++ + C + + AL ++M
Sbjct: 156 NRMEEAMSMVNQMV----------EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 542 VGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQ 601
G+ P+ + +T L++ SG A +L+ M + + PDV+ + I V+ +
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 602 AFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
A L+ EM I PN+ TY +L+ G + E +Q
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRA-YDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYE 280
+ + + + F K + + A++ Y+ S+K L+ N T+I G G ++ ++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 281 DLRSQNVTLNIYVFNSLMNVNAHD--LKFTLEVYKNMQKL---GVMADMASYNILLKACC 335
+ S+ V NI +N L++ ++ +K L ++++MQK GV ++ +YN+LL C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G A ++ +++ E + + K A + A+ + + S GV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK----AGKVKNAVNLFCSLPSKGVK 492
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
PN +T++++I+ GL +A LF +M + G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 41/387 (10%)
Query: 262 IIDVCGIC-GDYMKSRAIYEDLRSQ-NVTLNIYVFNSL-MNVNAHDLKFTLEV-YKNMQK 317
+I C C + +K +++LR LN ++SL M++ DL F V Y+ M+
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 318 LGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAK 377
G + M Y ++ A C G T A+ ++ + LD ++++ F
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIG----FVLDSHIGTSLLLGFCRGL 244
Query: 378 WWQMALKVKEDMLSAGVT--PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ ALKV D++S VT PN++++S LI+ G +E+A L ++M + GC+P+++
Sbjct: 245 NLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 436 CNILLQACVEACQFDRAFRLF--------RSWTLSKTQVALGEDYDGNTDRISNMEHKDK 487
+L++A + D+AF LF + + T + G DG + + + K
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLS 545
+ D+ F P+ TYN L+ C D V A L+ M
Sbjct: 364 K-----------------DRIF---PSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 546 PNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSL 605
PN ++ L++ G A+ +LK M ++G+SPD+V+Y I R + A+ L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 606 FEEMKHYQIQPNLVTYITLLRARSRYG 632
M + I+P+ +T+ ++ A + G
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQG 490
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 164/402 (40%), Gaps = 61/402 (15%)
Query: 240 ALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSL 297
A +D PN++ +ID G+C G ++ + + + ++ +N+L
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 298 MNVNAHDLKFT--LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEA 355
+N D + E+ M+K ++ ++N L++ C G A + +K +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL---LKRMLD 434
Query: 356 KGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVE 415
G L D+ +Y+ ++ A K+ M + P+ +T++++INA G +
Sbjct: 435 NG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 416 QAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGN 475
A ML+ G + L+ C+ + KT+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDG---VCK------------VGKTR---------- 528
Query: 476 TDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK-- 533
D + +E K I TP+ ++L K C +VK
Sbjct: 529 -DALFILETLVKMRILTTPH-----------------SLNVILDMLSKGC-----KVKEE 565
Query: 534 -ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKV 592
A++ ++ +GL P+ +++T L+D SG++ G+ +IL++M+ G P+V YT I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
+ R+++A L M+ + PN VTY +++ G L
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 142/374 (37%), Gaps = 63/374 (16%)
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M + G +Y +L+KA C G L + + + +G K +V TY+ ++
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRG---LIDKAFNLFDEMIPRGC-KPNVHTYTVLIDGLC 347
Query: 375 DAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQ 434
+ A V M+ + P+ IT+++LIN G V A L M + C+PN +
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 435 CCNILLQACVEACQFDRAFRLFRSW---TLSKTQVALGEDYDGNTDRISNMEHKDKQSIT 491
N L++ + +A L + LS V+ Y+ D + H
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS----YNVLIDGLCREGHM------ 457
Query: 492 NTPNFVPNSHYSSFDKR--FSFKPTTTTYNILMKACCTDYYR--VKALMNEMRTVGLSPN 547
N+ Y F +P T+ ++ A C A + M G+S +
Sbjct: 458 -------NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 548 HISWTILIDACGGSGNVEGALQILKIM-------------------------RED----- 577
++ T LID G AL IL+ + +E+
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 578 -----GMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
G+ P VV YTT + +RS + +F + E MK PN+ Y ++ ++G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 633 SLHEVQQCLAVYQD 646
+ E ++ L+ QD
Sbjct: 631 RVEEAEKLLSAMQD 644
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 128/317 (40%), Gaps = 28/317 (8%)
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ FN LM + + K M G+ D+ SYN+L+ C G+ A ++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
+ + ++ D T++ I+ F +A ML G++ + +T ++LI+
Sbjct: 465 SSMNCFD----IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKT 464
G A+ + E +++ N++L + C+ + L +
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 465 QVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA 524
V DG + + + + K P Y I++
Sbjct: 581 VVTYTTLVDG---------------LIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 525 CCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSP 581
C + RV+ L++ M+ G+SPNH+++T+++ +G ++ AL+ ++ M E G
Sbjct: 626 LC-QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 582 DVVAYTTAIKVCVRSKR 598
+ Y++ ++ V S++
Sbjct: 685 NDRIYSSLLQGFVLSQK 701
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ V +PN +S++ILI G +E A + M E G P YT IK +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
+AF+LF+EM +PN+ TY L+ R G + E
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 502 YSSFDKRFSFKPTTTTYNILMKACCTDYYRVK---ALMNEMRTVGLSPNHISWTILIDAC 558
+ K + P + +Y+IL+ C + R++ L ++M G P+ ++T+LI A
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLC-EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 559 GGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNL 618
G ++ A + M G P+V YT I R ++++A + +M +I P++
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 619 VTYITLLRARSRYGSLHEVQQCLAVYQ 645
+TY L+ + G + + L V +
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVME 398
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 261 TIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQ 316
T+ID G+C G + I E L + + N ++++ +K L + +
Sbjct: 516 TLID--GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 317 KLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL-----DVFTYSTIVK 371
KLG++ + +Y L+ +G +I G + LE ++KL +V+ Y+ I+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSG------DITGSFRILE---LMKLSGCLPNVYPYTIIIN 624
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ M +GV+PN +T++ ++ N G +++A+ M++ G E
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 432 NSQCCNILLQACV 444
N + + LLQ V
Sbjct: 685 NDRIYSSLLQGFV 697
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 59/361 (16%)
Query: 278 IYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVMADMASYNILLKACC 335
+Y D++ N++ +N L+ + K ++ M G D SY ++ + C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 336 LAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVT 395
G +E+ + + V Y+ ++ ++ A ++ +M+ G++
Sbjct: 228 EVGLVKEGRELAERFEPV---------VSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 396 PNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL 455
PN I++S+LIN N+G +E A +ML+ GC PN + L++ C
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-----------F 327
Query: 456 FRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTT 515
R T + ++ + F +P
Sbjct: 328 LRGTTFDALDL-----------------------------------WNQMIRGFGLQPNV 352
Query: 516 TTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
YN L++ C+ VKA + + M +G SPN ++ LI+ G+++GA+ I
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M G P+VV YT ++ R + K+A SL E M P++ T+ ++ G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 634 L 634
L
Sbjct: 473 L 473
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 39/393 (9%)
Query: 267 GICG--DYMKSRAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMA 322
G+C DY + + ++ + ++ N+ +++L+NV N+ ++ M K G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 323 DMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMA 382
++ + + L+K C L G T A +++ ++ + G L+ +V Y+T+V+ F A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQM--IRGFG-LQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 383 LKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
+ V M G +PN T+ SLIN A G ++ A++++ +ML +GC PN +++A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 443 CVEACQFDRAFRLFRSWTLSKTQVAL----------GEDYDGNTDRISNMEHKDKQSITN 492
+F A L +SK A G G D + + +Q
Sbjct: 432 LCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 493 TPNFVPNSH--------------YSSFDKRF--SFKPTTTTYNILMKACCTDYYRVKAL- 535
PN V + Y + F + +++TYN L+ C AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 536 -MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMR--EDGMSPDVVAYTTAIKV 592
+ +M G SP+ I+ ++I A G E A Q+L ++ PDV++YT I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 593 CVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
RS + L E M I P++ T+ L+
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 42/347 (12%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ +++ G + YN +L L N + Q IY + ++ G + +VFTY+
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTL-LGENRI--QMIYMVYRDMKRDG-FEPNVFTYNV 186
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++K A K+ +M + G P+ ++++++I++ GLV++ L E
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF---- 242
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
EP N L+ + + AF L R + + +
Sbjct: 243 -EPVVSVYNALINGLCKEHDYKGAFELMR-------------------EMVEKGISPNVI 282
Query: 489 SITNTPNFVPNSHYSSFDKRFSF---------KPTTTTYNILMKACCTDYYRVKAL--MN 537
S + N + NS + FSF P T + L+K C AL N
Sbjct: 283 SYSTLINVLCNS--GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 538 EM-RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRS 596
+M R GL PN +++ L+ GN+ A+ + M E G SP++ Y + I +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 597 KRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAV 643
L A ++ +M PN+V Y ++ A R+ E + + +
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 123/318 (38%), Gaps = 39/318 (12%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAH--DLKFTL 309
PN+ T++ G C G+ +K+ +++ + + NI + SL+N A L +
Sbjct: 350 PNVVAYNTLVQ--GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M G ++ Y +++A C A+ + + +K V T++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI----EIMSKENCAPSVPTFNAF 463
Query: 370 VKVFADAKWWQMALKVKEDMLSAG-VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
+K DA A KV M PN +T++ L++ A A +E+A L E+ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRIS 480
E +S N LL A A +L ++ + L G +R +
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 481 NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMNE 538
M D S R ++P +Y ++ C R L+
Sbjct: 584 QM--LDLVSC----------------GRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 539 MRTVGLSPNHISWTILID 556
M + G+ P+ +W++LI+
Sbjct: 626 MISAGIVPSIATWSVLIN 643
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLR 283
+ + + F K+ L A+ ++ PN+ + +++ + ++ ++ E +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 284 SQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNM-QKLGVMADMASYNILLKACCLAGNT 340
+N ++ FN+ + +A L + +V++ M Q+ ++ +YN LL A
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 341 VLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTIT 400
+E YG + + +GV + TY+T++ +A +AL++ M+ G +P+ IT
Sbjct: 510 ---EEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 401 WSSLINACANAGLVEQAMHLFE 422
+ +I A G E+A + +
Sbjct: 566 MNMIILAYCKQGKAERAAQMLD 587
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 248 KKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDL 305
++H PN+ ++D ++ + ++ + V + +N+L++ NA
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 306 KFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFT 365
L++ M G D + N+++ A C G A ++ V K + DV +
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK--WRPDVIS 602
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLIN 406
Y+ ++ + + + + E M+SAG+ P+ TWS LIN
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 181/393 (46%), Gaps = 40/393 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
PN+ +++ G+C GD + + + + + ++ +FN++++ + L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++K M+ G+ ++ +Y+ L+ C G A ++ ++ +E K + ++ T++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEKK--INPNLVTFNAL 336
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ F + A K+ +DM+ + P+ T++SL+N +++A +FE M+ C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSW--------TLSKTQVALGEDYDGNTDRISN 481
P+ N L++ ++ + + LFR T++ T + G +DG+ D N
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD---N 453
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKAL--MNEM 539
+ KQ +++ VP P TY+IL+ C + KAL + M
Sbjct: 454 AQKVFKQMVSDG---VP--------------PDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
+ + + +T +I+ +G V+ + + G+ P+VV Y T I + L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYG 632
++A++L ++MK PN TY TL+RA R G
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 46/416 (11%)
Query: 264 DVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNMQKLGVM 321
D G+ G +KSR + +I FN L++ A KF + + + MQ+L ++
Sbjct: 68 DAIGLFGGMVKSRPLP----------SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 322 ADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQM 381
+ +YNIL+ C LA + G++ L + + T S+++ + K
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP----SIVTLSSLLNGYCHGKRISD 173
Query: 382 ALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQ 441
A+ + + M+ G P+TIT+++LI+ +A+ L + M+Q GC+PN +++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 442 ACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEH--------KDKQSITNT 493
+ D A L +K + + ++ D + H K+ ++
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADV-VIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 494 PNFVPNS----------HYSSFDKRFS------FKPTTTTYNILMKACCTD--YYRVKAL 535
PN V S +S + S P T+N L+ A + + + L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 536 MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVR 595
++M + P+ ++ L++ ++ A Q+ + M PDVV Y T IK +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 596 SKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
SKR++ LF EM H + + VTY TL++ G Q+ V++ M G
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK---VFKQMVSDG 465
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 162/348 (46%), Gaps = 17/348 (4%)
Query: 304 DLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDV 363
D L + M+ + AD+ +N ++ + C + A ++ K +E KG+ + +V
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGI-RPNV 295
Query: 364 FTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEE 423
TYS+++ W A ++ DM+ + PN +T+++LI+A G +A L+++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 424 MLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNME 483
M++ +P+ N L+ + D+A ++F + +SK Y+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVTYNTLIKGFC--- 411
Query: 484 HKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVG 543
K K+ T F SH ++ TT + C + +V +M + G
Sbjct: 412 -KSKRVEDGTELFREMSHRGLVGDTVTY--TTLIQGLFHDGDCDNAQKV---FKQMVSDG 465
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
+ P+ ++++IL+D +G +E AL++ M++ + D+ YTT I+ ++ ++ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
LF + ++PN+VTY T++ S S +Q+ A+ + M + G
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 570
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 57/328 (17%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN-VNAHD-LKFTLE 310
+PN+ +ID G ++++ +Y+D+ +++ +I+ +NSL+N HD L +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+++ M D+ +YN L+K C + E++ E+ H G D TY+T++
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTLI 442
Query: 371 K-VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ +F D A KV + M+S GV P+ +T+S L++ N G +E+A+ +F+ M ++
Sbjct: 443 QGLFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQS 489
+ + +++ +A + D + LF S +L
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--------------------------- 534
Query: 490 ITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMRTVGLSPN 547
KP TYN ++ C+ AL+ +M+ G PN
Sbjct: 535 --------------------GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 548 HISWTILIDACGGSGNVEGALQILKIMR 575
++ LI A G+ + ++++ MR
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 164/391 (41%), Gaps = 51/391 (13%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
++F + K R + AL + + PN+ ++I G + + + D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILLKACCLAGN 339
+ + + N+ FN+L++ + KF ++Y +M K + D+ +YN L+ C+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
A++++ + + +K DV TY+T++K F +K + ++ +M G+ +T+
Sbjct: 381 LDKAKQMF---EFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
T+++LI + G + A +F++M+ G P+ +ILL + ++A +F
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-- 494
Query: 460 TLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYN 519
+ K+++ L D T I M K + + + + S + KP TYN
Sbjct: 495 YMQKSEIKL--DIYIYTTMIEGMCKAGK--VDDGWDL-----FCSLSLK-GVKPNVVTYN 544
Query: 520 ILMKACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
++ C+ K L+ E A +LK M+EDG
Sbjct: 545 TMISGLCS-----KRLLQE----------------------------AYALLKKMKEDGP 571
Query: 580 SPDVVAYTTAIKVCVRSKRLKQAFSLFEEMK 610
P+ Y T I+ +R + L EM+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 41/384 (10%)
Query: 254 PNMYICRTIIDVCGIC--GDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTL 309
P+ + R++ID G+C G+ ++ A++ + + + N+ ++N+L+ N +
Sbjct: 354 PDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 310 EVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
++ M + G++ ++ ++NIL+ C G A G VK + +KG D+FT++ +
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD---GLVKVMISKGYFP-DIFTFNIL 467
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
+ ++ + AL++ + ML GV P+ T++SL+N E M ++ M++ GC
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLF---RSWTLSKTQVALGEDYDG---NTDRISNME 483
PN NILL++ + D A L ++ +++ V G DG N D
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL----- 582
Query: 484 HKDKQSITNTPNFVPNSHYSSFDK---RFSFKPTTTTYNILMKACCT--DYYRVKALMNE 538
+ Y+ F K + +T TYNI++ A + + L E
Sbjct: 583 ---------------DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 539 MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKR 598
M L P+ ++ +++D +GNV + L M E+G P + I R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 599 LKQAFSLFEEMKHYQIQPNLVTYI 622
+ +A + M + P V I
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 167/418 (39%), Gaps = 61/418 (14%)
Query: 224 FCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGIC--GDYMKSRAIYED 281
F +R KK D+ + D K PN++ I G+C G+ + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGC 276
Query: 282 LRSQNVTLNIYVFNSLMNVNAHDLKFT-LEVY-KNMQKLGVMADMASYNILLKACCLAGN 339
L Q ++ +N+L+ + KF EVY M G+ D +YN L+ C G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
LA+ I G+ G + D FTY +++ AL + + L G+ PN I
Sbjct: 337 VQLAERIVGDAVF---NGFVP-DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA-CVEACQFDRAFRLFRS 458
+++LI +N G++ +A L EM + G P Q NIL+ C C D +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-------A 445
Query: 459 WTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTY 518
L K ++ G + P T+
Sbjct: 446 DGLVKVMISKG-----------------------------------------YFPDIFTF 464
Query: 519 NILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
NIL+ T AL ++ M G+ P+ ++ L++ + E ++ K M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 577 DGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSL 634
G +P++ + ++ R ++L +A L EEMK+ + P+ VT+ TL+ + G L
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 167/393 (42%), Gaps = 42/393 (10%)
Query: 262 IIDVCGICGDYMKSR------AIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYK 313
++ C + G + + ++ + + V+L + FN L+ V D+K ++
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 314 NMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVL-----KLDVFTYST 368
+ K GV+ ++ +YN+ ++ C G E+ G V+ + G L K DV TY+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRG------ELDGAVRMV---GCLIEQGPKPDVITYNN 291
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ +Q A M++ G+ P++ T+++LI G+V+ A + + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
P+ L+ + +RA LF ALG+ N + + +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNE--------ALGKGIKPNVILYNTL----IK 399
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKA-----CCTDYYRVKALMNEMRTVG 543
++N + + ++ P T+NIL+ C +D L+ M + G
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKG 456
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
P+ ++ ILI +E AL+IL +M ++G+ PDV Y + + ++ + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
++ M PNL T+ LL + RY L E
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 193/468 (41%), Gaps = 68/468 (14%)
Query: 228 VREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNV 287
++ +G+K + A+ ++ + P ++ I+ V G + ++ +Y +R + +
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 288 TLNIYVF--------------------NSL------MNVNAH--------DLKFTLEVYK 313
T ++Y F N++ MNV A+ + F E Y+
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 314 NMQKL---GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
K+ GV ++++N LL+ C G+ +++ +V +GVL ++FTY+ +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK---RGVLP-NLFTYNLFI 258
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA-CANAGLVEQAMHLFEEMLQAGC 429
+ A+++ ++ G P+ IT+++LI C N+ E ++L +M+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL-GKMVNEGL 317
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDR--ISNMEHKDK 487
EP+S N L+ + A R+ + G D T R I + H+ +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN------GFVPDQFTYRSLIDGLCHEGE 371
Query: 488 QSITNTPNFVPNSHYSSFDKRFS--FKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVG 543
N + F++ KP YN L+K ++A L NEM G
Sbjct: 372 T----------NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 544 LSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAF 603
L P ++ IL++ G V A ++K+M G PD+ + I +++ A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 604 SLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+ + M + P++ TY +LL + +V + Y+ M + G
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME---TYKTMVEKG 526
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 277 AIYEDLRSQNVTLNIYVFNSLMNVNAHDLK--FTLEVYKNMQKLGVMADMASYNILLKAC 334
A+ D+ + +I+ FN +++ + K F ++ + M + G D+ SY IL+
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 335 CLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALK-VKEDMLSAG 393
AG A EI+ + + + D + +V A+ +A + V E++ SA
Sbjct: 160 FRAGKVTDAVEIWNAM----IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAF 453
V +T+ +++LI+ AG +E+A L M + GCEP+ N+LL + RA
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 454 RLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKP 513
+ S Q+ Y+ R + H DK P
Sbjct: 276 GVMAEMVRSGIQLD-AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD---------- 324
Query: 514 TTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+Y+ L++ C ++ + L EMR G+ N +++T LI A GN A ++L
Sbjct: 325 -VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
M E G+SPD + YTT + +S + +A+ +F +M ++I P+ ++Y +L+ R
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 632 GSLHEVQQCLAVYQDM 647
G V + + +++DM
Sbjct: 444 G---RVTEAIKLFEDM 456
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 272 YMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKNMQKLGVMADMASYNILL 331
YM DL + NV LN Y N++ LK V M + G+ D SYN LL
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNM-------LKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 332 KACCLAGNTVLAQEIYG-EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDML 390
K C + + Y VK +E +G DV +YST+++ F A + A ++ E+M
Sbjct: 298 KRHCRVSH---PDKCYNFMVKEMEPRGF--CDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Query: 391 SAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFD 450
G+ N +T++SLI A G A L ++M + G P+ +L ++ D
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 451 RAFRLF 456
+A+ +F
Sbjct: 413 KAYGVF 418
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 42/324 (12%)
Query: 342 LAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITW 401
LA+ IY ++K + L FTYS + K + + + DM + G P+ +
Sbjct: 62 LAEAIYWDMKPMG----FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAF 117
Query: 402 SSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTL 461
+ ++ V A+ F M+Q G EP+ IL+ A + A ++ +
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177
Query: 462 SKTQ--------VALGEDYDGNTDRISNMEHKD-KQSITNTPNFVPNSHYSSFDK----- 507
S + +G + D M ++ K + V N+ S F K
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237
Query: 508 ----------RFSFKPTTTTYNILMKACCTDYY-------RVKALMNEMRTVGLSPNHIS 550
+ +P TYN+L+ +YY R + +M EM G+ + S
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLL-----NYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 551 WTILIDA-CGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEM 609
+ L+ C S + ++K M G DVV+Y+T I+ R+ ++A+ LFEEM
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 610 KHYQIQPNLVTYITLLRARSRYGS 633
+ + N+VTY +L++A R G+
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGN 375
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
A + + +++ M++ G++ ++ +Y L+KA GN+ +A+++ ++ L L
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG----LSP 393
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
D Y+TI+ + A V DM+ +TP+ I+++SLI+ +G V +A+ LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
E+M C P+ ++ + + A++++
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTL--EVYKNMQKLGVMADMASYNILL 331
K+ ++E++R + + +N+ + SL+ + ++ ++ M +LG+ D Y +L
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
C +GN A ++ ++ E + D +Y++++ + A+K+ EDM
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHE----ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA 442
P+ +T+ +I + A ++++M+ G + + L++A
Sbjct: 459 KECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 21/310 (6%)
Query: 309 LEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYST 368
+E++ M++ GV AD +YN L+ C +G A + ++ + + ++ +V T++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL---MRDMVMRDIVP-NVITFTA 249
Query: 369 IVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAG 428
++ VF + A+K+ E+M V P+ T++SLIN G V++A + + M+ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 429 CEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQ 488
C P+ N L+ ++ + D +LFR Q L D I +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLVGDTITYNTIIQGYFQAGR- 364
Query: 489 SITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALM--NEMRTVGLSP 546
P++ F R +P TY+IL+ C ++ KAL+ M+ +
Sbjct: 365 ---------PDAAQEIF-SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 547 NHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLF 606
+ ++ I+I GNVE A + + + G+ PDVV+YTT I R ++ ++ L+
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 607 EEMKHYQIQP 616
+M+ + P
Sbjct: 475 RKMQEDGLLP 484
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 155/380 (40%), Gaps = 72/380 (18%)
Query: 302 AHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKL 361
+ + + ++ +M+ G+ D+ SYNI++ C V+A + G++ +
Sbjct: 82 SKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEP---- 137
Query: 362 DVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLF 421
DV T S+++ F A+ + M G P+ + ++++I+ GLV A+ LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 422 EEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYDGNTDRISN 481
+ M + G ++ N L+ + ++ A RL R + D + N
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR--------------DIVPN 243
Query: 482 MEHKDKQSITNTPN---FVPNSHYSSFDK------RFSFKPTTTTYNILMKACCTDYYRV 532
+ IT T FV +S K R P TYN L+ C + RV
Sbjct: 244 V-------ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRV 295
Query: 533 ---KALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
K +++ M T G P+ +++ LI+ S V+ ++ + M + G+ D + Y T
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 590 IK---------------------------------VCVRSKRLKQAFSLFEEMKHYQIQP 616
I+ +C+ + R+++A LFE M+ +I+
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM-NWRVEKALVLFENMQKSEIEL 414
Query: 617 NLVTYITLLRARSRYGSLHE 636
++ TY ++ + G++ +
Sbjct: 415 DITTYNIVIHGMCKIGNVED 434
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 352 HLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANA 411
H+E G+ D+++Y+ ++ + +AL V M+ G P+ +T SSLIN
Sbjct: 94 HMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 152
Query: 412 GLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF--------RSWTLSK 463
V A+ L +M + G P+ N ++ + + A LF R+ ++
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 464 TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMK 523
+ G G R S+ + + + VPN +F T ++ +K
Sbjct: 213 NSLVAGLCCSG---RWSDAARLMRDMVMR--DIVPNV--------ITF---TAVIDVFVK 256
Query: 524 ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
+ L EM + P+ ++ LI+ G V+ A Q+L +M G PDV
Sbjct: 257 E--GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLA 642
V Y T I +SKR+ + LF EM + + +TY T+++ + G Q+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYK 313
PN+ +IDV G + ++ +YE++ + V +++ +NSL +N + ++ K
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL--INGLCMHGRVDEAK 299
Query: 314 NMQKL----GVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTI 369
M L G + D+ +YN L+ C + +++ E+ G D TY+TI
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTI 355
Query: 370 VKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGC 429
++ + A A ++ M S PN T+S L+ VE+A+ LFE M ++
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 430 EPNSQCCNILLQACVEACQFDRAFRLFRS 458
E + NI++ + + A+ LFRS
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 508 RFSFKPTTTTYNILMKACCTDYYRVKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
+F ++P T + L+ C A L+++M +G P+ + + +ID G V
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
A+++ M DG+ D V Y + + S R A L +M I PN++T+ ++
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 626 RARSRYGSLHEVQQCLAVYQDM 647
+ G E + +Y++M
Sbjct: 252 DVFVKEGKFSEA---MKLYEEM 270
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 181/440 (41%), Gaps = 79/440 (17%)
Query: 257 YICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEVYKN 314
+ C T++ C G +++ + +L+S +N+L+ V +T L V K
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 315 MQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFA 374
M++ AD +YN L+ A AG ++E G ++ + KGV+ + TY+T++ +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAG---FSKEAAGVIEMMTKKGVMP-NAITYTTVIDAYG 397
Query: 375 DAKWWQMALKV----KE-------------------------------DMLSAGVTPNTI 399
A ALK+ KE DM S G +PN
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSW 459
TW++++ C N G+ + +F EM G EP+ N L+ A A +++
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 460 TLSK------------TQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDK 507
T + +A D+ + IS+M+ K
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK---------------------- 555
Query: 508 RFSFKPTTTTYNILMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVE 565
FKPT T+Y+++++ A +Y ++ + N ++ + P+ + L+ A +
Sbjct: 556 --GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 566 GALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLL 625
G+ + + ++ G PD+V + + + + R+ QA + E ++ + P+LVTY +L+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 626 RARSRYGSLHEVQQCLAVYQ 645
R G + ++ L +
Sbjct: 674 DMYVRRGECWKAEEILKTLE 693
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 172/405 (42%), Gaps = 41/405 (10%)
Query: 254 PNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LEV 311
PN T+ID G G ++ ++ ++ N +N+++++ + +++
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 312 YKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVK 371
+M+ G + A++N +L C G ++ E+K + D T++T++
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG----FEPDRDTFNTLIS 499
Query: 372 VFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEP 431
+ A K+ +M AG T+++L+NA A G ++ +M G +P
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 432 NSQCCNILLQACVEACQF---------DRAFRLFRSWTLSKTQVALGEDYDGNTDRISNM 482
+++LQ + + + ++F SW L +T + ++N
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL------------LANF 607
Query: 483 EHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTD--YYRVKALMNEMR 540
+ + + + K+ +KP +N ++ + Y + + ++ +R
Sbjct: 608 KCR---------ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 541 TVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLK 600
GLSP+ +++ L+D G A +ILK + + + PD+V+Y T IK R ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 601 QAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ---QCLA 642
+A + EM I+P + TY T + + G E++ +C+A
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 170/404 (42%), Gaps = 34/404 (8%)
Query: 258 ICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKF--TLEVYKNM 315
+ + + G Y + + + + Q L++ + ++++ + K+ +++++ M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 316 QKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFAD 375
+++G + +YN++L G + ++I G + + +KG LK D FT ST++ A
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRS--WRKILGVLDEMRSKG-LKFDEFTCSTVLSACAR 293
Query: 376 AKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQC 435
+ A + ++ S G P T+T+++L+ AG+ +A+ + +EM + C +S
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 436 CNILLQACVEACQFDRAFRLFRSWT--------LSKTQVALGEDYDGNTDRISNMEHKDK 487
N L+ A V A A + T ++ T V G D + + K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 488 QSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNEMRTVGLSPN 547
++ VPN+ +++ S + N ++K C +M++ G SPN
Sbjct: 414 EA-----GCVPNT--CTYNAVLSLLGKKSRSNEMIKMLC-----------DMKSNGCSPN 455
Query: 548 HISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFE 607
+W ++ CG G + ++ + M+ G PD + T I R A ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 608 EMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
EM + TY LL A +R G + V DM G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGEN---VISDMKSKG 556
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 166/437 (37%), Gaps = 43/437 (9%)
Query: 216 IVPRADILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKS 275
++P A I + + +GK AL+ + + K+ PN ++ + G +
Sbjct: 382 VMPNA-ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 276 RAIYEDLRSQNVTLNIYVFNSLMNV--NAHDLKFTLEVYKNMQKLGVMADMASYNILLKA 333
+ D++S + N +N+++ + N KF V++ M+ G D ++N L+ A
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 334 CCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAG 393
G+ V A ++YGE+ + V TY+ ++ A W+ V DM S G
Sbjct: 501 YGRCGSEVDASKMYGEM----TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 394 VTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQA---CVEACQFD 450
P ++S ++ A G + + + P+ LL A C +
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 451 RAFRLFRSWTLSKTQVALGEDYDGNTDRISNMEHKDKQSITNT--PNFVPNSHYSSFD-- 506
RAF LF+ +K I N+ F N+ Y +
Sbjct: 617 RAFTLFKKHG-----------------------YKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 507 ----KRFSFKPTTTTYNILMKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGG 560
+ P TYN LM + ++ + ++ + L P+ +S+ +I
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 561 SGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVT 620
G ++ A+++L M E G+ P + Y T + + + E M +PN +T
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Query: 621 YITLLRARSRYGSLHEV 637
+ ++ R G E
Sbjct: 774 FKMVVDGYCRAGKYSEA 790
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+L NF K R L + RA+ KKH P+M I +++ + Y ++ I E
Sbjct: 602 LLLANF-----KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+R ++ ++ +NSLM+ V + E+ K ++K + D+ SYN ++K C G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG- 715
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
L QE + + +G+ + +FTY+T V + + V E M PN +
Sbjct: 716 --LMQEAVRMLSEMTERGI-RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 400 TWSSLINACANAGLVEQAMHL 420
T+ +++ AG +AM
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDF 793
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 173/392 (44%), Gaps = 42/392 (10%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMN--VNAHDLKFTLE 310
SPN+ I T+ID C G+ K++ ++ ++ + N + L+N K E
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
+Y+ MQ+ GV ++ +YN ++ C G T A +++ E++ +GV ++ TY+T++
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE---RGV-SCNIVTYNTLI 310
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
A KV + M S G+ PN IT+++LI+ G + +A+ L ++ G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF-----RSWTLSKTQVALGEDYDGNTDRISNMEHK 485
P+ NIL+ A ++ R SK + D +D NME
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD---NMEKA 427
Query: 486 DKQSIT-NTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKALMNE------ 538
+ ++ VP+ H TY++L+ C +K MNE
Sbjct: 428 IQLRLSMEELGLVPDVH---------------TYSVLIHGFC-----IKGQMNEASRLFK 467
Query: 539 -MRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
M PN + + +I G+ AL++LK M E ++P+V +Y I+V + +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARS 629
+ K+A L E+M I P+ + RA++
Sbjct: 528 KSKEAERLVEKMIDSGIDPSTSILSLISRAKN 559
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 28/363 (7%)
Query: 287 VTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQ 344
V L++Y F L+ A +++ + ++ + + G ++ Y L+ CC G A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 345 EIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSL 404
+++ E+ L L + TY+ ++ + ++ E M GV PN T++ +
Sbjct: 219 DLFFEMGKLG----LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 405 INACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRL---FRSWTL 461
+N G + A +F+EM + G N N L+ + + A ++ +S +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 462 SKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNIL 521
+ + DG K ++++ + K P+ TYNIL
Sbjct: 335 NPNLITYNTLIDGFCGV-----GKLGKALSLCRDL----------KSRGLSPSLVTYNIL 379
Query: 522 MKACC--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGM 579
+ C D ++ EM G+ P+ +++TILID S N+E A+Q+ M E G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 580 SPDVVAYTTAIK-VCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
PDV Y+ I C++ ++ +A LF+ M +PN V Y T++ + GS +
Sbjct: 440 VPDVHTYSVLIHGFCIKG-QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 639 QCL 641
+ L
Sbjct: 499 KLL 501
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 354 EAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGL 413
E K + LDV+++ ++K +A + + + ++ G +PN + +++LI+ C G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 414 VEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQVALGEDYD 473
+E+A LF EM + G N + +L+ + + F ++ L Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL---YT 270
Query: 474 GNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD--KRFSFKPTTTTYNILMKACCTDYYR 531
N + N KD ++ + FD + TYN L+ C +
Sbjct: 271 YNC--VMNQLCKDGRT---------KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 532 VKA--LMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTA 589
+A ++++M++ G++PN I++ LID G G + AL + + ++ G+SP +V Y
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 590 IKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQ 639
+ R A + +EM+ I+P+ VTY L+ +R ++ + Q
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 25/246 (10%)
Query: 401 WSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT 460
+ +IN+ + + ++ F EM+ G P S C N LL V + F++ + F
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154
Query: 461 LSKTQVALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFD-----KRFSFKPTT 515
+K++V L + Y E + + SFD F F P
Sbjct: 155 -NKSKVVL-DVYSFGILIKGCCEAGEIEK--------------SFDLLIELTEFGFSPNV 198
Query: 516 TTYNILMKACCT--DYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKI 573
Y L+ CC + + K L EM +GL N ++T+LI+ +G + ++ +
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 574 MREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGS 633
M+EDG+ P++ Y + + R K AF +F+EM+ + N+VTY TL+ R
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 634 LHEVQQ 639
L+E +
Sbjct: 319 LNEANK 324
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 232 GKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRA--IYEDLRSQNVTL 289
G+ +D A + +D ++ S N+ T+I G+C + + A + + ++S +
Sbjct: 282 GRTKD---AFQVFDEMRERGVSCNIVTYNTLIG--GLCREMKLNEANKVVDQMKSDGINP 336
Query: 290 NIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIY 347
N+ +N+L++ L L + ++++ G+ + +YNIL+ C G+T A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM- 395
Query: 348 GEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINA 407
VK +E +G+ K TY+ ++ FA + + A++++ M G+ P+ T+S LI+
Sbjct: 396 --VKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 408 CANAGLVEQAMHLFEEMLQAGCEPNSQCCN-ILLQACVEACQFDRAFRLFR 457
G + +A LF+ M++ CEPN N ++L C E + RA +L +
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY-RALKLLK 502
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 582 DVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCL 641
DV ++ IK C + ++++F L E+ + PN+V Y TL+ + G E+++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG---EIEKAK 218
Query: 642 AVYQDMWKAG 651
++ +M K G
Sbjct: 219 DLFFEMGKLG 228
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 136/314 (43%), Gaps = 29/314 (9%)
Query: 360 KLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMH 419
K D TY ++ A W+ A+ + +DML A + P+ T+++LINAC ++G +A+
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 420 LFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWTLSKTQ-------------V 466
+ ++M G P+ NI+L A Q+ +A F +K +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 467 ALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRF-------------SFKP 513
LG+ D ++M K + + F H S KP
Sbjct: 295 KLGQSSQA-LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 514 TTTTYNILMKACCTDYYRVKAL--MNEMRTVGLSPNHISWTILIDACGGSGNVEGALQIL 571
+YN LM A AL + +++ G+ P+ +S+T L+++ G S A ++
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 572 KIMREDGMSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRY 631
+MR++ P+VV Y I + L +A +F +M+ I+PN+V+ TLL A SR
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 632 GSLHEVQQCLAVYQ 645
V L+ Q
Sbjct: 474 KKKVNVDTVLSAAQ 487
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 178/414 (42%), Gaps = 32/414 (7%)
Query: 235 RDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTL--NIY 292
R AL ++ K P+ II G ++ ++ +R + ++
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 293 VFNSLMNVNAHDLKFTLE----VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYG 348
F S+M++ + +K +E V++ M G+ ++ SYN L+ A + G + A + G
Sbjct: 322 TFTSIMHL--YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 349 EVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINAC 408
++K G++ DV +Y+ ++ + ++ A +V M PN +T+++LI+A
Sbjct: 380 DIKQ---NGIIP-DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 409 ANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEA---CQFDRAFRLFRSWTLSKTQ 465
+ G + +A+ +F +M Q G +PN LL AC + D +S ++
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 466 VALGEDYDGNTDRISNMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKAC 525
A Y+ N +K + Y S K+ K + T+ IL+
Sbjct: 496 AA----YNSAIGSYINAAELEKAI----------ALYQSMRKK-KVKADSVTFTILISGS 540
Query: 526 C--TDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDV 583
C + Y + + EM + + ++ ++ A G V A I M+ G PDV
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 584 VAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEV 637
+AYT+ + S++ +A LF EM+ I+P+ + L+RA ++ G V
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 30/313 (9%)
Query: 366 YSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEML 425
Y+ ++++ A W A + +M P+ T+ +LINA AG AM+L ++ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 426 QAGCEPNSQCCNILLQACVEACQFDRAFRLFRSWT-------LSKTQVAL-----GEDYD 473
+A P+ N L+ AC + + A + + T L + L G Y
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 474 GNTDRISNMEHKDKQSITNTPNFVP-------------NSHYSSFDKRFSFKPTTTTYNI 520
M+ + T T N + + S +KR +P T+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 521 LMK--ACCTDYYRVKALMNEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDG 578
+M + + +A+ M GL PN +S+ L+ A G AL +L ++++G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 579 MSPDVVAYTTAIKVCVRSKRLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQ 638
+ PDVV+YT + RS++ +A +F M+ + +PN+VTY L+ A YGS +
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA---YGSNGFLA 442
Query: 639 QCLAVYQDMWKAG 651
+ + +++ M + G
Sbjct: 443 EAVEIFRQMEQDG 455
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 175/410 (42%), Gaps = 47/410 (11%)
Query: 274 KSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLGVMADMASYNILL 331
++R ++ +++ + + +++L+N + A ++ + + +M + + ++YN L+
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 332 KACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLS 391
AC +GN A E+ K + GV D+ T++ ++ + + + AL E M
Sbjct: 221 NACGSSGNWREALEV---CKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 392 AGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQ--AGCEPNS---------------- 433
A V P+T T++ +I + G QA+ LF M + A C P+
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 434 QCCNILLQACV------EACQFDRAFRLFRSWTLSKTQVALGEDYDGN---TDRIS---- 480
+ C + +A V ++ + +S T +++ D N D +S
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 481 -NMEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVKA--LMN 537
N + +Q F+ ++ KP TYN L+ A ++ + +A +
Sbjct: 397 LNSYGRSRQPGKAKEVFL-------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 538 EMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSK 597
+M G+ PN +S L+ AC S +L + G++ + AY +AI + +
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 509
Query: 598 RLKQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDM 647
L++A +L++ M+ +++ + VT+ L+ R E L +D+
Sbjct: 510 ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/412 (18%), Positives = 177/412 (42%), Gaps = 39/412 (9%)
Query: 253 SPNMYICRTIIDVCGICGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFT--LE 310
+P+ +I+ CG G++ ++ + + + V ++ N +++ +++ L
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 311 VYKNMQKLGVMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIV 370
++ M+ V D ++NI++ G + A +++ ++ E + + DV T+++I+
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECRPDVVTFTSIM 327
Query: 371 KVFADAKWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMLQAGCE 430
+++ + V E M++ G+ PN +++++L+ A A G+ A+ + ++ Q G
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 431 PNSQCCNILLQACVEACQFDRAFRLF------RSWTLSKTQVALGEDYDGN---TDRISN 481
P+ LL + + Q +A +F R T AL + Y N + +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 482 MEHKDKQSITNTPNFVPNSHYSSFDKRFSFKPTTTTYNILMKACCTDYYRVK--ALMNEM 539
++ I KP + L+ AC +V +++
Sbjct: 448 FRQMEQDGI---------------------KPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 540 RTVGLSPNHISWTILIDACGGSGNVEGALQILKIMREDGMSPDVVAYTTAIKVCVRSKRL 599
++ G++ N ++ I + + +E A+ + + MR+ + D V +T I R +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 600 KQAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHEVQQCLAVYQDMWKAG 651
+A S +EM+ I Y ++L A S+ G + E + +++ M AG
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE---SIFNQMKMAG 595
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 222 ILFCNFVREFGKKRDLVSALRAYDASKKHLSSPNMYICRTIIDVCGICGDYMKSRAIYED 281
+ + + +G L A+ + ++ PN+ T++ C + +
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 282 LRSQNVTLNIYVFNSLMN--VNAHDLKFTLEVYKNMQKLGVMADMASYNILLKACCLAGN 339
+S+ + LN +NS + +NA +L+ + +Y++M+K V AD ++ IL+ C
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS- 544
Query: 340 TVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKVFADAKWWQMALKVKEDMLSAGVTPNTI 399
K+ EA +Y LK ED LS +T
Sbjct: 545 -----------KYPEA--------ISY----------------LKEMED-LSIPLTKEV- 567
Query: 400 TWSSLINACANAGLVEQAMHLFEEMLQAGCEPNSQCCNILLQACVEACQFDRAFRLF 456
+SS++ A + G V +A +F +M AGCEP+ +L A + ++ +A LF
Sbjct: 568 -YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 222,535,335
Number of Sequences: 539616
Number of extensions: 8937427
Number of successful extensions: 31999
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 23624
Number of HSP's gapped (non-prelim): 4474
length of query: 651
length of database: 191,569,459
effective HSP length: 124
effective length of query: 527
effective length of database: 124,657,075
effective search space: 65694278525
effective search space used: 65694278525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)