BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006306
(651 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 153/277 (55%), Gaps = 14/277 (5%)
Query: 379 VLGNGGLGSSYKAAMANGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
+LG GG G YK +A+G V VKR++E Q G F E+ + H N+L +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
E+L+V YM GS+ L E+ S L+WP R I G A GL+++H + +
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPK 154
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTN--PNHVAQTM---FAYISPEYIQHQQLSP 552
+ H ++K++N+LL +++ ++GDF L + HV + +I+PEY+ + S
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 553 KSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
K+DV+ G+++LE+ITG+ F L+N + +++ V L+ ++ ++ L+D ++ N
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLLDWVKGLLKEK-KLEALVDVDLQGN 272
Query: 611 AENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
++ + QL+++ L CT+S P +R + E ++M+E
Sbjct: 273 YKDE--EVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 153/277 (55%), Gaps = 14/277 (5%)
Query: 379 VLGNGGLGSSYKAAMANGLTVVVKRIREMN-QLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
+LG GG G YK +A+G V VKR++E Q G F E+ + H N+L +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
E+L+V YM GS+ L E+ S L+WP R I G A GL+++H + +
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPK 162
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTN--PNHVAQTM---FAYISPEYIQHQQLSP 552
+ H ++K++N+LL +++ ++GDF L + HV + +I+PEY+ + S
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 553 KSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
K+DV+ G+++LE+ITG+ F L+N + +++ V L+ ++ ++ L+D ++ N
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLLDWVKGLLKEK-KLEALVDVDLQGN 280
Query: 611 AENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
++ + QL+++ L CT+S P +R + E ++M+E
Sbjct: 281 YKDE--EVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLG----RDTFDAEMRRLGRIKHPNILAPLA 435
+G GG G YK + N TV VK++ M + + FD E++ + + +H N++ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D+ +V YMP GSLL L G L+W R I +G ANG++F+H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------AYISPEYIQH 547
H ++KS+N+LL + + + DF + AQT+ AY++PE ++
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEK--FAQTVMXXRIVGTTAYMAPEALR- 208
Query: 548 QQLSPKSDVYCLGILILEVITG 569
+++PKSD+Y G+++LE+ITG
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLG----RDTFDAEMRRLGRIKHPNILAPLA 435
+G GG G YK + N TV VK++ M + + FD E++ + + +H N++ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D+ +V YMP GSLL L G L+W R I +G ANG++F+H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------AYISPEYIQH 547
H ++KS+N+LL + + + DF + AQT+ AY++PE ++
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEK--FAQTVMXSRIVGTTAYMAPEALR- 208
Query: 548 QQLSPKSDVYCLGILILEVITG 569
+++PKSD+Y G+++LE+ITG
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 22/202 (10%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLG----RDTFDAEMRRLGRIKHPNILAPLA 435
+G GG G YK + N TV VK++ M + + FD E++ + + +H N++ L
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D+ +V YMP GSLL L G L+W R I +G ANG++F+H
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------AYISPEYIQH 547
H ++KS+N+LL + + + DF + AQ + AY++PE ++
Sbjct: 149 ---IHRDIKSANILLDEAFTAKISDFGLARASEK--FAQXVMXXRIVGTTAYMAPEALR- 202
Query: 548 QQLSPKSDVYCLGILILEVITG 569
+++PKSD+Y G+++LE+ITG
Sbjct: 203 GEITPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 379 VLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
++G+G G YK + +G V +KR + G + F+ E+ L +HP++++ + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R+E +++ +YM G+L L+G + ++W RL I G A GL ++H+ +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTR----AI 160
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHP------LTNPNHVAQTMFAYISPEYIQHQQLSP 552
H ++KS N+LL +++VP + DF T+ V + YI PEY +L+
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 553 KSDVYCLGILILEVITGK 570
KSDVY G+++ EV+ +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 379 VLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
++G+G G YK + +G V +KR + G + F+ E+ L +HP++++ + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R+E +++ +YM G+L L+G + ++W RL I G A GL ++H+ +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTR----AI 160
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHP------LTNPNHVAQTMFAYISPEYIQHQQLSP 552
H ++KS N+LL +++VP + DF T+ V + YI PEY +L+
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 553 KSDVYCLGILILEVITGK 570
KSDVY G+++ EV+ +
Sbjct: 221 KSDVYSFGVVLFEVLCAR 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 381 GNGGLGSSYKAAMANGLTVVVKRIREMNQLG----RDTFDAEMRRLGRIKHPNILAPLAY 436
G GG G YK + N TV VK++ M + + FD E++ + +H N++ L +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
D+ +V Y P GSLL L G L+W R I +G ANG++F+H
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFA-------FHPLTNPNHVAQTMFAYISPEYIQHQQ 549
H ++KS+N+LL + + + DF F + + T AY +PE ++ +
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT-AYXAPEALR-GE 201
Query: 550 LSPKSDVYCLGILILEVITG 569
++PKSD+Y G+++LE+ITG
Sbjct: 202 ITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 30/265 (11%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGR--DTFDAEMRRLGRIKHPNILAPLA 435
E +G G G+ ++A +G V VK + E + + F E+ + R++HPNI+ +
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ +V+EY+ +GSL LLH K + +L+ RL++ VA G++++H+ +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H NLKS N+L+ + Y + DF L ++ A +++PE ++ + +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANA 611
KSDVY G+++ E+ T L G ++ ++V+++ R+ EI N
Sbjct: 218 EKSDVYSFGVILWELAT-------LQQPWGNLNPAQVVAAVGFKCKRL------EIPRNL 264
Query: 612 ENSIGMMVQLLKIGLACTESEPAKR 636
+ +++ C +EP KR
Sbjct: 265 NPQVAAIIE------GCWTNEPWKR 283
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGR--DTFDAEMRRLGRIKHPNILAPLA 435
E +G G G+ ++A +G V VK + E + + F E+ + R++HPNI+ +
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ +V+EY+ +GSL LLH K + +L+ RL++ VA G++++H+ +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LKS N+L+ + Y + DF L + A +++PE ++ + +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANA 611
KSDVY G+++ E+ T L G ++ ++V+++ R+ EI N
Sbjct: 218 EKSDVYSFGVILWELAT-------LQQPWGNLNPAQVVAAVGFKCKRL------EIPRNL 264
Query: 612 ENSIGMMVQLLKIGLACTESEPAKR 636
+ +++ C +EP KR
Sbjct: 265 NPQVAAIIE------GCWTNEPWKR 283
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 81 LSGTIDVEALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEI-PDDF 137
SG + ++ L ++ GL + L N F+G +PE N +L L LSSNNFS I P+
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 138 FAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTS-IVSLDF 196
P LQ+L+L NN FTGKIP +L N L LHL N SG IP ++ S + L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 197 SNNNLEGEIPKGL 209
N LEGEIP+ L
Sbjct: 447 WLNMLEGEIPQEL 459
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 85 IDVEALRQIAGLTSIALQNNFFTG-AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTP 143
I E L +++ + + + G P F+ G++ L +S N S IP + M
Sbjct: 596 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI-GSMPY 654
Query: 144 LQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQP-TSIVSLDFSNNNLE 202
L L L +N +G IPD + +L+ L L L N G IP+ + T + +D SNNNL
Sbjct: 655 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 714
Query: 203 GEIPK--GLSKFGPKPFADNDKLCGKPLRK 230
G IP+ F P F +N LCG PL +
Sbjct: 715 GPIPEMGQFETFPPAKFLNNPGLCGYPLPR 744
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 81 LSGTIDVEALRQIAGLTSIALQNNFFTGAIPEF-NKLGALNALYLSSNNFSEEIPDDFFA 139
LSG D LT + L N F GA+P F L +L LSSNNFS E+P D
Sbjct: 286 LSGACDT--------LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 140 PMTPLQKLWLDNNKFTGKIPDSLMNL-----------------------QN----LTELH 172
M L+ L L N+F+G++P+SL NL QN L EL+
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 173 LHGNGFSGLIPETIQPTS-IVSLDFSNNNLEGEIPKGL 209
L NGF+G IP T+ S +VSL S N L G IP L
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 73 SLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIP-EFNKLGALNALYLSSNNFSE 131
SL L LSGTI +L ++ L + L N G IP E + L L L N+ +
Sbjct: 419 SLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Query: 132 EIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP-ETIQPTS 190
EIP + T L + L NN+ TG+IP + L+NL L L N FSG IP E S
Sbjct: 478 EIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 191 IVSLDFSNNNLEGEIPKGLSK 211
++ LD + N G IP + K
Sbjct: 537 LIWLDLNTNLFNGTIPAAMFK 557
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 32/161 (19%)
Query: 76 LQNMSLSGT-IDVEALRQIAGLTSIALQN---NFFTGAIPEFNKLGALNALYLSSNNFSE 131
LQ++ +SG + + R I+ T + L N N F G IP L +L L L+ N F+
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTG 280
Query: 132 EIPDDFFAPMTPLQKLWLDNNKFTGKIP-------------------------DSLMNLQ 166
EIPD L L L N F G +P D+L+ ++
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 340
Query: 167 NLTELHLHGNGFSGLIPETIQ--PTSIVSLDFSNNNLEGEI 205
L L L N FSG +PE++ S+++LD S+NN G I
Sbjct: 341 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 87/236 (36%), Gaps = 65/236 (27%)
Query: 32 LILFKKSLVHNGVLDSWDPKPISNPCTDKWQGVMCINGVVSSL----------------- 74
LI FK L +L W NPCT + GV C + V+S+
Sbjct: 14 LISFKDVLPDKNLLPDWSSN--KNPCT--FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 69
Query: 75 ----------FLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIPEFNKLGA---LNA 121
FL N ++G+ V + A LTS+ L N +G + LG+ L
Sbjct: 70 LLSLTGLESLFLSNSHINGS--VSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 127
Query: 122 LYLSSNNF-------------SEEIPDDFFAPMT--------------PLQKLWLDNNKF 154
L +SSN S E+ D ++ L+ L + NK
Sbjct: 128 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKI 187
Query: 155 TGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNLEGEIPKGLS 210
+G + S NL L + N FS IP +++ LD S N L G+ + +S
Sbjct: 188 SGDVDVS--RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAIS 241
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 81 LSGTIDVEALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEI-PDDF 137
SG + ++ L ++ GL + L N F+G +PE N +L L LSSNNFS I P+
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 138 FAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTS-IVSLDF 196
P LQ+L+L NN FTGKIP +L N L LHL N SG IP ++ S + L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 197 SNNNLEGEIPKGL 209
N LEGEIP+ L
Sbjct: 450 WLNMLEGEIPQEL 462
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 111 PEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTE 170
P F+ G++ L +S N S IP + M L L L +N +G IPD + +L+ L
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 171 LHLHGNGFSGLIPETIQP-TSIVSLDFSNNNLEGEIPK--GLSKFGPKPFADNDKLCGKP 227
L L N G IP+ + T + +D SNNNL G IP+ F P F +N LCG P
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744
Query: 228 LRK 230
L +
Sbjct: 745 LPR 747
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 81 LSGTIDVEALRQIAGLTSIALQNNFFTGAIPEF-NKLGALNALYLSSNNFSEEIPDDFFA 139
LSG D LT + L N F GA+P F L +L LSSNNFS E+P D
Sbjct: 289 LSGACDT--------LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 140 PMTPLQKLWLDNNKFTGKIPDSLMNL-----------------------QN----LTELH 172
M L+ L L N+F+G++P+SL NL QN L EL+
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 173 LHGNGFSGLIPETIQPTS-IVSLDFSNNNLEGEIPKGL 209
L NGF+G IP T+ S +VSL S N L G IP L
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 73 SLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIP-EFNKLGALNALYLSSNNFSE 131
SL L LSGTI +L ++ L + L N G IP E + L L L N+ +
Sbjct: 422 SLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 132 EIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP-ETIQPTS 190
EIP + T L + L NN+ TG+IP + L+NL L L N FSG IP E S
Sbjct: 481 EIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 191 IVSLDFSNNNLEGEIPKGLSK 211
++ LD + N G IP + K
Sbjct: 540 LIWLDLNTNLFNGTIPAAMFK 560
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 32/161 (19%)
Query: 76 LQNMSLSGT-IDVEALRQIAGLTSIALQN---NFFTGAIPEFNKLGALNALYLSSNNFSE 131
LQ++ +SG + + R I+ T + L N N F G IP L +L L L+ N F+
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTG 283
Query: 132 EIPDDFFAPMTPLQKLWLDNNKFTGKIP-------------------------DSLMNLQ 166
EIPD L L L N F G +P D+L+ ++
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 343
Query: 167 NLTELHLHGNGFSGLIPETIQ--PTSIVSLDFSNNNLEGEI 205
L L L N FSG +PE++ S+++LD S+NN G I
Sbjct: 344 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 87/236 (36%), Gaps = 65/236 (27%)
Query: 32 LILFKKSLVHNGVLDSWDPKPISNPCTDKWQGVMCINGVVSSL----------------- 74
LI FK L +L W NPCT + GV C + V+S+
Sbjct: 17 LISFKDVLPDKNLLPDWSSN--KNPCT--FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 72
Query: 75 ----------FLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIPEFNKLGA---LNA 121
FL N ++G+ V + A LTS+ L N +G + LG+ L
Sbjct: 73 LLSLTGLESLFLSNSHINGS--VSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130
Query: 122 LYLSSNNF-------------SEEIPDDFFAPMT--------------PLQKLWLDNNKF 154
L +SSN S E+ D ++ L+ L + NK
Sbjct: 131 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKI 190
Query: 155 TGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNLEGEIPKGLS 210
+G + + NL L + N FS IP +++ LD S N L G+ + +S
Sbjct: 191 SGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAIS 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E +G G G+ Y A +A G V ++++ Q ++ E+ + K+PNI+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
+ DE VV EY+ GSL ++ E + ++ + + L F+HS
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIA-----AVCRECLQALEFLHSN---- 136
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSP 552
++ H N+KS N+LL D L DF F P ++ +++PE + + P
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LGI+ +E+I G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 33/298 (11%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH S + ++I +
Sbjct: 61 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIAR 115
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 116 QTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N I++V S
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS- 230
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
+ P++S N M +L+ C + + +R L IEE+
Sbjct: 231 -----------LSPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E +G G G+ Y A +A G V ++++ Q ++ E+ + K+PNI+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
+ DE VV EY+ GSL ++ E + ++ + + L F+HS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIA-----AVCRECLQALEFLHSN---- 135
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSP 552
++ H ++KS N+LL D L DF F P ++ +++PE + + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LGI+ +E+I G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E +G G G+ Y A +A G V ++++ Q ++ E+ + K+PNI+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
+ DE VV EY+ GSL ++ E + ++ + + L F+HS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIA-----AVCRECLQALEFLHSN---- 135
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSP 552
++ H ++KS N+LL D L DF F P ++ +++PE + + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LGI+ +E+I G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E +G G G+ Y A +A G V ++++ Q ++ E+ + K+PNI+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
+ DE VV EY+ GSL ++ E + ++ + + L F+HS
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIA-----AVCRECLQALEFLHSN---- 136
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSP 552
++ H ++KS N+LL D L DF F P ++ +++PE + + P
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LGI+ +E+I G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 33/298 (11%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH S + ++I +
Sbjct: 73 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIAR 127
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF---HPLTNPNHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + +H + +
Sbjct: 128 QTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N I++V S
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS- 242
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
+ P++S N M +L+ C + + +R L IEE+
Sbjct: 243 -----------LSPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E +G G G+ Y A +A G V ++++ Q ++ E+ + K+PNI+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
+ DE VV EY+ GSL ++ E + ++ + + L F+HS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIA-----AVCRECLQALEFLHSN---- 135
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSP 552
++ H ++KS N+LL D L DF F P ++ +++PE + + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LGI+ +E+I G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 380 LGNGGLGSSYKAAMAN------GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
LG G G + A N + V VK +++ R F E L ++H +I+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 434 LAYHFRRDEKLVVSEYMPKGSL-----------LFLLHGEKGISHAELNWPTRLNIIKGV 482
D ++V EYM G L + L+ G+ + EL L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 483 ANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHP---LTNPNHVA-QTMF- 537
A+G+ ++ AS H +L + N L+ + + +GDF T+ V TM
Sbjct: 143 ASGMVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 538 -AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSSLIGD 595
++ PE I +++ + +SDV+ G+++ E+ T GK P LSN +V+E ++
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----EVIECIT----- 249
Query: 596 QDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
Q RV E P + ++ + L C + EP +RL+++E K++ +
Sbjct: 250 QGRVLE--RPRVCPK---------EVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 14/223 (6%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRL 422
DKD + + + LG G G + N V VK ++ + F E +
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLM 62
Query: 423 GRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGV 482
++H ++ A R + +++EYM KGSLL L ++G ++ P ++ +
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQI 119
Query: 483 ANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMF 537
A G+++I + H +L+++NVL+S+ + + DF + N A+
Sbjct: 120 AEGMAYIERK----NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNA 579
+ +PE I + KSDV+ GIL+ E++T GK P +NA
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNA 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR-----EMNQLGRDTFDAEMRRLGRIKHPNILA 432
E++G GG G Y+A G V VK R +++Q + E + +KHPNI+A
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQT-IENVRQEAKLFAMLKHPNIIA 70
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ +V E+ G L +L G++ +NW + +A G++++H E
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE 124
Query: 493 FASYELPHGNLKSSNVLLSQ--------DYVPLLGDFA----FHPLTNPNHVAQTMFAYI 540
A + H +LKSSN+L+ Q + + + DF +H T + A +A++
Sbjct: 125 -AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS--AAGAYAWM 181
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+PE I+ S SDV+ G+L+ E++TG+ P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 28 DNQALILFKKSLVHNGVLDSWDPKPISNPCTDKWQGVMCINGVVSSLFLQNMSLSGTIDV 87
D QAL+ KK L + L SW P ++ C W GV+C + + + N+ LSG
Sbjct: 7 DKQALLQIKKDLGNPTTLSSW--LPTTDCCNRTWLGVLC-DTDTQTYRVNNLDLSGLNLP 63
Query: 88 EALRQIAGLTSIALQNNFFTGAI--------PEFNKLGALNALYLSSNNFSEEIPDDFFA 139
+ + L ++ N + G I P KL L+ LY++ N S IPD F +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-FLS 122
Query: 140 PMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTS--IVSLDFS 197
+ L L N +G +P S+ +L NL + GN SG IP++ S S+ S
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 198 NNNLEGEIP 206
N L G+IP
Sbjct: 183 RNRLTGKIP 191
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
+D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 62 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 116
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 117 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
+D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 62 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 116
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 117 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 33/298 (11%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + +V+++ SL LH S + ++I +
Sbjct: 73 VLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIAR 127
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF---HPLTNPNHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + +H + +
Sbjct: 128 QTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N I++V S
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS- 242
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
+ P++S N M +L+ C + + +R L IEE+
Sbjct: 243 -----------LSPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 85 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 140 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 84 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 138
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 139 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 85 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF---HPLTNPNHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + +H + +
Sbjct: 140 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMR 420
D D + + D + +G+G G+ YK + V + + F E+
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + +H NIL + Y + + +V+++ SL LH I + ++I +
Sbjct: 77 VLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIAR 131
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF---HPLTNPNHVAQTM- 536
A G+ ++H++ + H +LKS+N+ L +D +GDF + +H + +
Sbjct: 132 QTAQGMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 537 --FAYISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 380 LGNGGLGSSYKAAMAN------GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
LG G G + A N + V VK +++ + R F E L ++H +I+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 434 LAYHFRRDEKLVVSEYMPKGSL--LFLLHGEKGISHAELNWPTR------LNIIKGVANG 485
D ++V EYM G L HG + AE N PT L+I + +A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHP---LTNPNHV-AQTMF--AY 539
+ ++ AS H +L + N L+ ++ + +GDF T+ V TM +
Sbjct: 141 MVYL----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 540 ISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSSLIGDQDR 598
+ PE I +++ + +SDV+ LG+++ E+ T GK P LSN +V+E ++ Q R
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIECIT-----QGR 247
Query: 599 VAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLE 640
V L P ++ ++ L C + EP R +++
Sbjct: 248 V--LQRPRTCPQ---------EVYELMLGCWQREPHMRKNIK 278
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +I+H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + A V VK ++ + + F AE + ++H + L L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQH-DKLVKLHAVVT 80
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
++ +++E+M KGSLL L ++G S L P ++ +A G++FI
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQIAEGMAFIEQR----NYI 133
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPKS 554
H +L+++N+L+S V + DF + N A+ + +PE I + KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 555 DVYCLGILILEVIT-GKFPSQYLSN 578
DV+ GIL++E++T G+ P +SN
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D + + D + +G+G G+ YK + V + + F E+ L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
+H NIL + Y + + +V+++ SL LH I + ++I + A
Sbjct: 61 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM---FA 538
G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 539 YISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 72
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 125
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D + + D + +G+G G+ YK + V + + F E+ L +
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 62
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
+H NIL + Y + + +V+++ SL LH I + ++I + A
Sbjct: 63 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 117
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM---FA 538
G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 118 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 539 YISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 75
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 128
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 189 SDVWSFGILLTELTTKGRVP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G+ YK + V + ++ + F E+ L + +H NIL + Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+D +V+++ SL LH + + ++I + A G+ ++H++ +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAK----NII 154
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FAYISPEYIQHQQLSP- 552
H ++KS+N+ L + +GDF + + +Q + +++PE I+ Q +P
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 553 --KSDVYCLGILILEVITGKFPSQYLSN 578
+SDVY GI++ E++TG+ P +++N
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 301
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 301
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 73
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 126
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 187 SDVWSFGILLTELTTKGRVP 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + A V VK ++ + + F AE + ++H + L L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQH-DKLVKLHAVVT 253
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
++ +++E+M KGSLL L ++G ++ P ++ +A G++FI
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR----NYI 306
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPKS 554
H +L+++N+L+S V + DF + N A+ + +PE I + KS
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 555 DVYCLGILILEVIT-GKFPSQYLSN 578
DV+ GIL++E++T G+ P +SN
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 71
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 124
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 185 SDVWSFGILLTELTTKGRVP 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 331
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNYV- 385
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 386 -HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 73 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 124
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H NL+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTN 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D + + D + +G+G G+ YK + V + + F E+ L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
+H NIL + Y + + +V+++ SL LH I + ++I + A
Sbjct: 61 TRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF---HPLTNPNHVAQTM---FA 538
G+ ++H++ + H +LKS+N+ L +D +GDF + +H + +
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 539 YISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 249
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 302
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 363 SDVWSFGILLTELTTKGRVP 382
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 301
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D + + D + +G+G G+ YK + V + + F E+ L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
+H NIL + Y + +V+++ SL LH I + ++I + A
Sbjct: 61 TRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP---NHVAQTM---FA 538
G+ ++H++ + H +LKS+N+ L +D +GDF + + +H + +
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 539 YISPEYIQHQQLSP---KSDVYCLGILILEVITGKFPSQYLSN 578
+++PE I+ Q +P +SDVY GI++ E++TG+ P ++N
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 79
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYV--ERMNY-- 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 79
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYV--ERMNY-- 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L ++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KG LL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 284 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 336
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H NL + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 397 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 437
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 438 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LGNG G + NG T V + + + ++F E + + ++KH ++ Y
Sbjct: 17 LGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ--LYAVV 73
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V+EYM KGSLL L +G + L P +++ VA G+++I E +Y
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYI--ERMNY-- 126
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+S+N+L+ + + DF L N A+ + +PE + + + K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 554 SDVYCLGILILEVIT-GKFPSQYLSN 578
SDV+ GIL+ E++T G+ P ++N
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 326 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 378
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H NL + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 439 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 479
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 480 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V EYM KGSLL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + A V VK ++ + + F AE + ++H + L L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQH-DKLVKLHAVVT 247
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
++ +++E+M KGSLL L ++G ++ P ++ +A G++FI
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR----NYI 300
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCL 559
H +L+++N+L+S V + DF + A+ + +PE I + KSDV+
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVG-----AKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 560 GILILEVIT-GKFPSQYLSN 578
GIL++E++T G+ P +SN
Sbjct: 356 GILLMEIVTYGRIPYPGMSN 375
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 82 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 133
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTN 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTN 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 39/280 (13%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG+G G V VK I+E + D F E + + ++ HP ++ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 440 RDEKLVVSEYMPKGSLLFLL--HGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+V+EY+ G LL L HG KG+ ++L L + V G++F+ S++
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQL-----LEMCYDVCEGMAFL----ESHQ 124
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSP 552
H +L + N L+ +D + DF + ++ + +PE + + S
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 553 KSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANA 611
KSDV+ GIL+ EV + GK P +N+ +VV VS + L P ++++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNS----EVVLKVS-------QGHRLYRPHLASDT 233
Query: 612 ENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEIHD 651
+ +I +C P KR ++ L IE + +
Sbjct: 234 ---------IYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 72 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 123
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTN 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 78 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 129
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTN 217
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 79 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 130
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTN 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 86 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 137
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTN 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 85 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 136
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTN 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 35/266 (13%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 87 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 138
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
KSDV+ GIL+ E++T G+ P ++N + +I + +R ++ P
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----------VIQNLERGYRMVRP----- 242
Query: 611 AENSIGMMVQLLKIGLACTESEPAKR 636
+N + QL+++ C + P R
Sbjct: 243 -DNCPEELYQLMRL---CWKERPEDR 264
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + N V VK ++ + F E + ++H ++ A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++E+M KGSLL L ++G ++ P ++ +A G+++I +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIERK----NYI 131
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPKS 554
H +L+++NVL+S+ + + DF + N A+ + +PE I + KS
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNA 579
+V+ GIL+ E++T GK P +NA
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNA 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 34/279 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+V+EYMP G+LL L + + E+ L + +++ + ++ +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKK----NF 151
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ +++V + DF L T H A+ + +PE + + S K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ ++ L E E
Sbjct: 212 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYDLL-------------EKGYRMEQ 252
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI-HD 651
G ++ ++ AC + PA R E + E + HD
Sbjct: 253 PEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 497 ELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLS 551
H +L+++N+L+S + DF L N A+ + +PE I + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 552 PKSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTN 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 238
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 238
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 84 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 136
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 197 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 237
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 238
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIK----HPNILAPLA 435
LG G G+ Y A +V ++ +Q+ ++ + ++RR I+ HPNIL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y + R ++ EY P+G L L +K + E T I++ +A+ L + H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTAT---IMEELADALMYCHGK--- 142
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLSP 552
++ H ++K N+LL + DF + + P+ +TM Y+ PE I+ + +
Sbjct: 143 -KVIHRDIKPENLLLGLKGELKIADFGW-SVHAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 553 KSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVEL-----VSSLIGDQDRVAELI 603
K D++C+G+L E++ G P + S+ + +V++ S G QD +++L+
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLL 256
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G + NG T V + + + + F E + + +++H ++ Y
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 440 RDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+E + +V EYM KG LL L GE G L P +++ +A+G++++ E +Y
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYV--ERMNY-- 135
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L+++N+L+ ++ V + DF L N A+ + +PE + + + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 554 SDVYCLGILILEVIT-GKFP 572
SDV+ GIL+ E+ T G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 93 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 145
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 206 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 246
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 247 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 235
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 235
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
EV+G G G KA V +K+I ++ R F E+R+L R+ HPNI+ Y
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVK--LYG 69
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGI-----SHAELNWPTRLNIIKGVANGLSFIHSE 492
+ +V EY GSL +LHG + + +HA ++W + + G++++HS
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-MSWCLQ------CSQGVAYLHS- 121
Query: 493 FASYELPHGNLKSSNVLL-SQDYVPLLGDFAFHP-----LTNPNHVAQTMFAYISPEYIQ 546
L H +LK N+LL + V + DF +TN A A+++PE +
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA----AWMAPEVFE 177
Query: 547 HQQLSPKSDVYCLGILILEVITGKFP 572
S K DV+ GI++ EVIT + P
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
EV+G G G KA V +K+I ++ R F E+R+L R+ HPNI+ Y
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVK--LYG 68
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGI-----SHAELNWPTRLNIIKGVANGLSFIHSE 492
+ +V EY GSL +LHG + + +HA ++W + + G++++HS
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-MSWCLQ------CSQGVAYLHS- 120
Query: 493 FASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHP-----LTNPNHVAQTMFAYISPEYIQ 546
L H +LK N+LL L + DF +TN A A+++PE +
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA----AWMAPEVFE 176
Query: 547 HQQLSPKSDVYCLGILILEVITGKFP 572
S K DV+ GI++ EVIT + P
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 81 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 133
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L + A+ + +PE + + + S K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 234
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 235 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 287 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 339
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H NL + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 400 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 440
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV-----AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L + A+ + +PE + + + S K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 235
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K IRE + + F E + ++ HP ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V+E+M G L L ++G+ AE T L + V G++++ +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 126
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 220
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 367 FGLADLMKAAAEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRI 425
F +DL+ EVLG G G + K G +V+K + ++ + TF E++ + +
Sbjct: 7 FRPSDLIHG--EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL 64
Query: 426 KHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
+HPN+L + ++ ++EY+ G+L ++ ++ W R++ K +A+G
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASG 120
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--------------AFHPLTNPNH 531
++++H S + H +L S N L+ ++ ++ DF L P+
Sbjct: 121 MAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 532 VAQTMFA----YISPEYIQHQQLSPKSDVYCLGILILEVI 567
+ +++PE I + K DV+ GI++ E+I
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R ++ E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 238
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R ++ E+M G+LL L + + E+N L + +++ + ++ +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 133
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 234
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 235 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 554 SDVYCLGILILEVIT 568
SDV+ G+L+ E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 137
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 238
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
G ++ ++ AC + P+ R E + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K I+E + D F E + ++ HP ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V E+M G L L ++G+ AE T L + V G++++ +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 145
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K IRE + + F E + ++ HP ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V E+M G L L ++G+ AE T L + V G++++ E AS +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYL--EEAS--VI 125
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 219
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
E LG G G + V VK +++ + D F AE + +++H ++ A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
++ +++EYM GSL+ L GI +L L++ +A G++FI
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER----N 129
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL-----TNPNHVAQTMFAYISPEYIQHQQLSP 552
H +L+++N+L+S + DF L A+ + +PE I + +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 553 KSDVYCLGILILEVIT-GKFPSQYLSN 578
KSDV+ GIL+ E++T G+ P ++N
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTN 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K IRE + + F E + ++ HP ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V E+M G L L ++G+ AE T L + V G++++ +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 128
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 222
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K IRE + + F E + ++ HP ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V E+M G L L ++G+ AE T L + V G++++ +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 125
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
+G+G G + N V +K IRE + + F E + ++ HP ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +V E+M G L L ++G+ AE T L + V G++++ +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 123
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L+ ++ V + DF + + + SPE + S KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
DV+ G+L+ EV + GK P + SN+ +VVE +S+
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST 217
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R +++E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 554 SDVYCLGILILEVIT 568
SDV+ G+L+ E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 58/248 (23%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E++G+GG G +KA +G T V++R++ N+ + E++ L ++ H NI+
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIV----- 68
Query: 437 HFR------------RDEKLVVSEYMP----------------------KGSLLFLLHGE 462
H+ D+ L S+Y P KG+L +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 463 KGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA 522
+G +L+ L + + + G+ +IHS+ +L H +LK SN+ L +GDF
Sbjct: 129 RG---EKLDKVLALELFEQITKGVDYIHSK----KLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 523 F-HPLTNPNHVAQT--MFAYISPEYIQHQQLSPKSDVYCLGILILEVI----TGKFPSQY 575
L N ++ Y+SPE I Q + D+Y LG+++ E++ T S++
Sbjct: 182 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF 241
Query: 576 LSNAKGGI 583
++ + GI
Sbjct: 242 FTDLRDGI 249
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R ++ E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R ++ E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 554 SDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAEN 613
SDV+ G+L+ E+ T Y + GID+ +V EL++ + E
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL-----------SQVYELLEKDY--RMER 233
Query: 614 SIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
G ++ ++ AC + P+ R E + E
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 44/269 (16%)
Query: 395 NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNIL-------APLAYHFRRDEKLVVS 447
N + V V ++R+ + F+ E RL HPN+L +P A H +++
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH-----PTLIT 88
Query: 448 EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSN 507
+MP GSL +LH +G + ++ + +A G++F+H+ +P L S +
Sbjct: 89 HWMPYGSLYNVLH--EGTNFV-VDQSQAVKFALDMARGMAFLHT--LEPLIPRHALNSRS 143
Query: 508 VLLSQDYVPL--LGDFAFHPLTNPNHVAQTMFAYISPEYIQHQQLSP---KSDVYCLGIL 562
V++ +D + D F +P + A+++PE +Q + +D++ +L
Sbjct: 144 VMIDEDMTARISMADVKFS-FQSPGRMYAP--AWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 563 ILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSIGMMVQLL 622
+ E++T + P LSN + G+ V +L G + + I P +S +L+
Sbjct: 201 LWELVTREVPFADLSNMEIGMKV-----ALEGLRPTIPPGISPHVS-----------KLM 244
Query: 623 KIGLACTESEPAKRLDLEEALKMIEEIHD 651
KI C +PAKR + + ++E++ D
Sbjct: 245 KI---CMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 14/195 (7%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG G G Y+ LTV VK ++E + + + F E + IKHPN++ L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
R ++ E+M G+LL L + + E++ L + +++ + ++ +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPL----TNPNHV-AQTMFAYISPEYIQHQQLSPK 553
H +L + N L+ ++++ + DF L T H A+ + +PE + + + S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 554 SDVYCLGILILEVIT 568
SDV+ G+L+ E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
E++G+GG G +KA +G T V+KR++ N+ + E++ L ++ H NI+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGC 72
Query: 432 -APLAYHFRRDEK----------LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
Y K + E+ KG+L + +G +L+ L + +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFE 129
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQT--MF 537
+ G+ +IHS+ +L + +LK SN+ L +GDF L N ++
Sbjct: 130 QITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVI----TGKFPSQYLSNAKGGI 583
Y+SPE I Q + D+Y LG+++ E++ T S++ ++ + GI
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRI----REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
+G+G G+ Y A + N V +K++ ++ N+ +D E+R L +++HPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK-EVRFLQKLRHPNTIQYR 81
Query: 435 AYHFRRDEKLVVSEY-MPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
+ R +V EY + S L +H +K + E+ + G GL+++HS
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIA-----AVTHGALQGLAYLHS-- 133
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFAYISPEYI---QHQQL 550
+ + H ++K+ N+LLS+ + LGDF + P + +++PE I Q
Sbjct: 134 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 551 SPKSDVYCLGILILEVITGKFP 572
K DV+ LGI +E+ K P
Sbjct: 192 DGKVDVWSLGITCIELAERKPP 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRI----REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
+G+G G+ Y A + N V +K++ ++ N+ +D E+R L +++HPN +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK-EVRFLQKLRHPNTIQYR 120
Query: 435 AYHFRRDEKLVVSEY-MPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
+ R +V EY + S L +H +K + E+ + G GL+++HS
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIA-----AVTHGALQGLAYLHS-- 172
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFAYISPEYI---QHQQL 550
+ + H ++K+ N+LLS+ + LGDF + P + +++PE I Q
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 551 SPKSDVYCLGILILEVITGKFP 572
K DV+ LGI +E+ K P
Sbjct: 231 DGKVDVWSLGITCIELAERKPP 252
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 380 LGNGGLGSSYKAAMAN------GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
LG G G + A N + V VK ++E ++ R F E L ++H +I+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 434 LAYHFRRDEKLVVSEYMPKGSL----------LFLLHGEKGISHAELNWPTRLNIIKGVA 483
L+V EYM G L LL G + ++ L L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHV---AQTMF-- 537
G+ ++ A H +L + N L+ Q V +GDF + + ++ +TM
Sbjct: 140 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVV 586
++ PE I +++ + +SDV+ G+++ E+ T GK P LSN + ID +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI 244
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 380 LGNGGLGSSYKAAMAN------GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
LG G G + A N + V VK ++E ++ R F E L ++H +I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 434 LAYHFRRDEKLVVSEYMPKGSL----------LFLLHGEKGISHAELNWPTRLNIIKGVA 483
L+V EYM G L LL G + ++ L L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHV---AQTMF-- 537
G+ ++ A H +L + N L+ Q V +GDF + + ++ +TM
Sbjct: 146 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVV 586
++ PE I +++ + +SDV+ G+++ E+ T GK P LSN + ID +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI 250
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 378 EVLGNGGLGSSYKAAMANG-----LTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNIL 431
+V+G G G YK + + V +K ++ + R F E +G+ H NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ ++++EYM G+L L + G E + + +++G+A G+ ++
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYL-- 163
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------TNPNHVAQTMFAYISPEY 544
A+ H +L + N+L++ + V + DF + T + + +PE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 545 IQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
I +++ + SDV+ GI++ EV+T G+ P LSN
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 380 LGNGGLGSSYKA-AMANGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
+G G G + + +G V+K I M+ R+ E+ L +KHPNI+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAE---LNWPTRLNIIKGVANGLSFIHSEF 493
+V +Y G L ++ +KG+ E L+W ++ + L +H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALKHVHDR- 144
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN-HVAQTMFA---YISPEYIQHQQ 549
++ H ++KS N+ L++D LGDF + N +A+ Y+SPE +++
Sbjct: 145 ---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 550 LSPKSDVYCLGILILEVITGK 570
+ KSD++ LG ++ E+ T K
Sbjct: 202 YNNKSDIWALGCVLYELCTLK 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 380 LGNGGLGSSYKAAMAN------GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
LG G G + A N + V VK ++E ++ R F E L ++H +I+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 434 LAYHFRRDEKLVVSEYMPKGSL----------LFLLHGEKGISHAELNWPTRLNIIKGVA 483
L+V EYM G L LL G + ++ L L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHV---AQTMF-- 537
G+ ++ A H +L + N L+ Q V +GDF + + ++ +TM
Sbjct: 169 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVV 586
++ PE I +++ + +SDV+ G+++ E+ T GK P LSN + ID +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI 273
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMN-QLGRDTFDAEMRRLGRIKHPNILAPLA 435
+ LG GG G ++A + +KRIR N +L R+ E++ L +++HP I+
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 436 YHFRRD--EKL----------VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVA 483
++ EKL + + K +L ++G I E + L+I +A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS--VCLHIFLQIA 128
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----- 538
+ F+HS+ L H +LK SN+ + D V +GDF + + QT+
Sbjct: 129 EAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 539 -----------YISPEYIQHQQLSPKSDVYCLGILILEVI 567
Y+SPE I S K D++ LG+++ E++
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 433 PLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ ++V+EYM GSL FL + + +L + +++G+A+G+ ++
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYL-- 134
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEY 544
+ H +L + N+L++ + V + DF + +P T + SPE
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 545 IQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
I +++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYL--- 151
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 152 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 251
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM------FAYISPEYI 545
+ H +L + N+L++ + V + DF L + A T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM------FAYISPEYI 545
+ H +L + N+L++ + V + DF L + A T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+EYM GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 433 PLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ ++V+EYM GSL FL + + +L + +++G+A+G+ ++
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYL-- 161
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEY 544
+ H +L + N+L++ + V + DF + +P T + SPE
Sbjct: 162 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 545 IQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
I +++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A N ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
++ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P+G + L ++ + I +AN LS+ HS+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 42/276 (15%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRD--TFDAEMRRLGRIKHPNILAPLA 435
E +G GG A +V +I + N LG D E+ L ++H +I
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQ--L 73
Query: 436 YHFRR--DEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
YH ++ +V EY P G L + + +S E TR+ + + + + ++++HS+
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEE----TRV-VFRQIVSAVAYVHSQG 128
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTM---FAYISPEYIQHQ 548
+ H +LK N+L + + L DF P N ++ QT AY +PE IQ +
Sbjct: 129 YA----HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 549 Q-LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEI 607
L ++DV+ +GIL+ ++ G P +V+ L ++ + V + + P
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFD-------DDNVMALYKKIMRGKYDVPKWLSP-- 235
Query: 608 SANAENSIGMMVQLLKIGLACTESEPAKRLDLEEAL 643
+SI ++ Q+L++ +P KR+ ++ L
Sbjct: 236 -----SSILLLQQMLQV-------DPKKRISMKNLL 259
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P+G + L ++ + I +AN LS+ HS+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 365 DPFGLADLMKAAAE--------------VLGNGGLGSSYKAAMA----NGLTVVVKRIRE 406
DPF D +A E V+G G G + + V +K ++
Sbjct: 12 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS 71
Query: 407 -MNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKG 464
+ R F +E +G+ HPN++ + ++++E+M GSL FL +
Sbjct: 72 GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ 131
Query: 465 ISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH 524
+ +L + +++G+A G+ ++ A H +L + N+L++ + V + DF
Sbjct: 132 FTVIQL-----VGMLRGIAAGMKYL----ADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Query: 525 PL-----TNPNHVA----QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQ 574
++P + + + + +PE IQ+++ + SDV+ GI++ EV++ G+ P
Sbjct: 183 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 242
Query: 575 YLSN 578
++N
Sbjct: 243 DMTN 246
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 9 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 63
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 117
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ + H ++KS ++LL+ D L DF F + +
Sbjct: 118 IAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 174 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELN 471
R F E +G+ HPN++ R ++V E+M G+L L G +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG----QFT 143
Query: 472 WPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLT--NP 529
+ +++G+A G+ ++ A H +L + N+L++ + V + DF + +P
Sbjct: 144 VIQLVGMLRGIAAGMRYL----ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 530 NHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
V T + +PE IQ+++ + SDV+ GI++ EV++ G+ P +SN
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 18 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 72
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 126
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ H ++KS ++LL+ D L DF F + +
Sbjct: 127 IAAVCLAVLQALSVLHAQGVI----HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 182
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 183 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 20 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 74
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 128
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ H ++KS ++LL+ D L DF F + +
Sbjct: 129 IAAVCLAVLQALSVLHAQGVI----HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 184
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 185 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 13 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 67
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 121
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ + H ++KS ++LL+ D L DF F + +
Sbjct: 122 IAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 177
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 178 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+E M GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
A H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 167 GAV----HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 144
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 204 VDLWSLGVLCYEFLVGKPP 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 153
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + + T+ Y+ PE I+ +
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-DYLPPEMIEGRMHDE 211
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 212 KVDLWSLGVLCYEFLVGKPP 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ +QL ++ + ++RR ++HPNIL
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y R ++ E+ P+G L L H + ++ +A+ L + H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
++ H ++K N+L+ + DF + H + Y+ PE I+ + K
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 554 SDVYCLGILILEVITGKFP 572
D++C G+L E + G P
Sbjct: 193 VDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ +QL ++ + ++RR ++HPNIL
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y R ++ E+ P+G L L H + ++ +A+ L + H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 134
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
++ H ++K N+L+ + DF + H + Y+ PE I+ + K
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 193
Query: 554 SDVYCLGILILEVITGKFP 572
D++C G+L E + G P
Sbjct: 194 VDLWCAGVLCYEFLVGMPP 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ +QL ++ + ++RR ++HPNIL
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y R ++ E+ P+G L L H + ++ +A+ L + H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
++ H ++K N+L+ + DF + H + Y+ PE I+ + K
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 554 SDVYCLGILILEVITGKFP 572
D++C G+L E + G P
Sbjct: 193 VDLWCAGVLCYEFLVGMPP 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 63 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 117
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 171
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ H ++KS ++LL+ D L DF F + +
Sbjct: 172 IAAVCLAVLQALSVLHAQGVI----HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 228 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL-DYLPPEMIEGRMHDE 185
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 153
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 395 NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKG 453
G V VK I+ N F AE + +++H N++ L L +V+EYM KG
Sbjct: 43 RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100
Query: 454 SLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQD 513
SL+ L + L L V + ++ H +L + NVL+S+D
Sbjct: 101 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSED 153
Query: 514 YVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKF 571
V + DF ++ + + +PE ++ ++ S KSDV+ GIL+ E+ + G+
Sbjct: 154 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
Query: 572 P 572
P
Sbjct: 214 P 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 27 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 139
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 140 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 196 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 358 SMINDDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGR 412
+M +D+DP + + LG G GS Y N G V VK+++ +
Sbjct: 2 AMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 61
Query: 413 DTFDAEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHA 468
F+ E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHI 120
Query: 469 ELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-- 526
+L L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 121 KL-----LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 171
Query: 527 -----TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 172 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 129
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + + T+ Y+ PE I+ +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-DYLPPEMIEGRMHDE 188
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 378 EVLGNGGLGSSYKAAMA----NGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G + + V +K ++ + R F +E +G+ HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 433 PLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ ++++E+M GSL FL + + +L + +++G+A G+ ++
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYL-- 125
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-----TNPNHVA----QTMFAYISP 542
A H L + N+L++ + V + DF ++P + + + + +P
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 543 EYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
E IQ+++ + SDV+ GI++ EV++ G+ P ++N
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-DYLPPEMIEGRMHDE 186
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPP 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 357 LSMINDDKDPFGLAD-LMKAAAEVLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDT 414
L ++ D DP D +K +G G G A + ++G V VK++ Q R+
Sbjct: 140 LQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 194
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ + +H N++ + DE VV E++ G+L + ++H +N
Sbjct: 195 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI------VTHTRMNEEQ 248
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ V LS +H++ H ++KS ++LL+ D L DF F + +
Sbjct: 249 IAAVCLAVLQALSVLHAQGVI----HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304
Query: 535 TMFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+++PE I P+ D++ LGI+++E++ G+ P
Sbjct: 305 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 131
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 132 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 191 VDLWSLGVLCYEFLVGKPP 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-DYLPPEMIEGRMHDE 185
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 27 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 139
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 140 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 196 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 433 PLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ ++V+E M GSL FL + + +L + +++G+A+G+ ++
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYL-- 134
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEY 544
+ H +L + N+L++ + V + DF + +P T + SPE
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 545 IQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
I +++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 234
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 24 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 136
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 137 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 193 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 31 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 90
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 91 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 143
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 144 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 200 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-DYLPPEMIEGRMHDE 190
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPP 210
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRI----REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
LG GG+ + Y A + V +K I RE + + F+ E+ ++ H NI++ +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-RFEREVHNSSQLSHQNIVSMI 77
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
D +V EY+ +L E SH L+ T +N + +G+ H
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTL-----SEYIESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 495 SYELPHGNLKSSNVLLSQDYVPLLGDFAF------HPLTNPNHVAQTMFAYISPEYIQHQ 548
+ H ++K N+L+ + + DF LT NHV T+ Y SPE + +
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV-QYFSPEQAKGE 187
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+D+Y +GI++ E++ G+ P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 126
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 186 VDLWSLGVLCYEFLVGKPP 204
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 37/242 (15%)
Query: 365 DPFGLADLMKAAAE--------------VLGNGGLGS----SYKAAMANGLTVVVKRIRE 406
DPF D +A E V+G G G K + V +K ++
Sbjct: 8 DPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA 67
Query: 407 -MNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKG 464
R F +E +G+ HPNI+ + ++++EYM GSL FL +
Sbjct: 68 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR 127
Query: 465 ISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH 524
+ +L + +++G+ +G+ ++ A H +L + N+L++ + V + DF
Sbjct: 128 FTVIQL-----VGMLRGIGSGMKYLSDMSAV----HRDLAARNILVNSNLVCKVSDFGMS 178
Query: 525 PL--TNPNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYL 576
+ +P T + +PE I +++ + SDV+ GI++ EV++ G+ P +
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 577 SN 578
SN
Sbjct: 239 SN 240
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-DYLPPEMIEGRMHDE 185
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 138
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 139 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 195 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G K ++V +K ++ + R F E +G+ HPNI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V+E M GSL L A+ + +++G+A+G+ ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYL--- 163
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNPNHVAQTM-----FAYISPEYI 545
+ H +L + N+L++ + V + DF + +P T + SPE I
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 546 QHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+++ + SDV+ GI++ EV++ G+ P +SN DV++ V
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTMFAYISPEYIQHQQLSP 552
+ H ++K N+LL + DF + P + + T+ Y+ PE I+ +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL-DYLPPEMIEGRMHDE 185
Query: 553 KSDVYCLGILILEVITGKFP 572
K D++ LG+L E + GK P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPP 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 395 NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKG 453
G V VK I+ N F AE + +++H N++ L L +V+EYM KG
Sbjct: 28 RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 85
Query: 454 SLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQD 513
SL+ L + L L V + ++ H +L + NVL+S+D
Sbjct: 86 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSED 138
Query: 514 YVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKF 571
V + DF ++ + + +PE ++ ++ S KSDV+ GIL+ E+ + G+
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 572 P 572
P
Sbjct: 199 P 199
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 138
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 139 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 195 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 359 MINDDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRD 413
M +D+DP + + LG G GS Y N G V VK+++ +
Sbjct: 1 MAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 60
Query: 414 TFDAEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAE 469
F+ E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +
Sbjct: 61 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIK 119
Query: 470 LNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--- 526
L L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 120 L-----LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
Query: 527 ----TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 171 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 361 NDDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTF 415
++D+DP + + LG G GS Y N G V VK+++ + F
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 416 DAEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELN 471
+ E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL- 119
Query: 472 WPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL----- 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 120 ----LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 527 --TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 85 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 144
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 197
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ F+ AS + H +L + N +L + + + DF F + N
Sbjct: 198 GLQVAKGMKFL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 254 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
EV+G+G A A V +KRI E Q D E++ + + HPNI++
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLL-HGEKGISHAE--LNWPTRLNIIKGVANGLSFIHSE 492
+DE +V + + GS+L ++ H H L+ T I++ V GL ++H
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------TNPNHVAQTMF---AYISPE 543
H ++K+ N+LL +D + DF N V +T +++PE
Sbjct: 141 GQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 544 YI-QHQQLSPKSDVYCLGILILEVITGKFP 572
+ Q + K+D++ GI +E+ TG P
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAEL 470
R F +E +G+ HPNI+ + ++++EYM GSL FL + + +L
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 112
Query: 471 NWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TN 528
+ +++G+ +G+ ++ + H +L + N+L++ + V + DF + +
Sbjct: 113 -----VGMLRGIGSGMKYL----SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
Query: 529 PNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
P T + +PE I +++ + SDV+ GI++ EV++ G+ P +SN
Sbjct: 164 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAEL 470
R F +E +G+ HPNI+ + ++++EYM GSL FL + + +L
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 118
Query: 471 NWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TN 528
+ +++G+ +G+ ++ + H +L + N+L++ + V + DF + +
Sbjct: 119 -----VGMLRGIGSGMKYL----SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
Query: 529 PNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
P T + +PE I +++ + SDV+ GI++ EV++ G+ P +SN
Sbjct: 170 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 377 AEVLGNGGLGSSYKAAM-ANGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILAPL 434
E +G G G + + A+ V VK RE + + F E R L + HPNI+ +
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
++ +V E + G L L E A L T L ++ A G+ ++ S+
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 495 SYELPHGNLKSSNVLLSQDYVPLLGDFAFHP------LTNPNHVAQTMFAYISPEYIQHQ 548
H +L + N L+++ V + DF + Q + +PE + +
Sbjct: 235 I----HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 549 QLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+ S +SDV+ GIL+ E + G P LSN +
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 362 DDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFD 416
+D+DP + + LG G GS Y N G V VK+++ + F+
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 64
Query: 417 AEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNW 472
E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-- 121
Query: 473 PTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------ 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 122 ---LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
Query: 527 -TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 175 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 124
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + DF + H ++ Y+ PE I+ + K
Sbjct: 125 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 184 VDLWSLGVLCYEFLVGKPP 202
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 362 DDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFD 416
+D+DP + + LG G GS Y N G V VK+++ + F+
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 66
Query: 417 AEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNW 472
E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-- 123
Query: 473 PTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------ 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 124 ---LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
Query: 527 -TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 177 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 377 AEVLGNGGLGSSYKAAM-ANGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILAPL 434
E +G G G + + A+ V VK RE + + F E R L + HPNI+ +
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
++ +V E + G L L E A L T L ++ A G+ ++ S+
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 495 SYELPHGNLKSSNVLLSQDYVPLLGDFAFHP------LTNPNHVAQTMFAYISPEYIQHQ 548
H +L + N L+++ V + DF + Q + +PE + +
Sbjct: 235 I----HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 549 QLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+ S +SDV+ GIL+ E + G P LSN +
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 395 NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKG 453
G V VK I+ N F AE + +++H N++ L L +V+EYM KG
Sbjct: 215 RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272
Query: 454 SLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQD 513
SL+ L + L L V + ++ H +L + NVL+S+D
Sbjct: 273 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSED 325
Query: 514 YVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKF 571
V + DF ++ + + +PE ++ ++ S KSDV+ GIL+ E+ + G+
Sbjct: 326 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
Query: 572 P 572
P
Sbjct: 386 P 386
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
EV+G+G A A V +KRI E Q D E++ + + HPNI++
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLL-HGEKGISHAE--LNWPTRLNIIKGVANGLSFIHSE 492
+DE +V + + GS+L ++ H H L+ T I++ V GL ++H
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------TNPNHVAQTMF---AYISPE 543
H ++K+ N+LL +D + DF N V +T +++PE
Sbjct: 136 GQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 544 YI-QHQQLSPKSDVYCLGILILEVITGKFP 572
+ Q + K+D++ GI +E+ TG P
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLN------IIKGVANGLSFI 489
Y ++ EY P G++ + EL +R + I +AN LS+
Sbjct: 80 YFHDATRVYLILEYAPLGTV-----------YRELQKLSRFDEQRTATYITELANALSYC 128
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQH 547
HS+ + H ++K N+LL + + DF + H ++ Y+ PE I+
Sbjct: 129 HSK----RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 548 QQLSPKSDVYCLGILILEVITGKFP 572
+ K D++ LG+L E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 364 KDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAE 418
+DP + + LG G GS Y N G V VK+++ + F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 419 MRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPT 474
+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL---- 117
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA----------FH 524
L + G+ ++ + H NL + N+L+ + +GDF ++
Sbjct: 118 -LQYTSQICKGMEYL----GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
Query: 525 PLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+ P ++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 173 KVKEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 362 DDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFD 416
+D+DP + + LG G GS Y N G V VK+++ + F+
Sbjct: 31 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 90
Query: 417 AEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNW 472
E+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-- 147
Query: 473 PTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------ 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 148 ---LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 527 -TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLN------IIKGVANGLSFI 489
Y ++ EY P G++ + EL +R + I +AN LS+
Sbjct: 80 YFHDATRVYLILEYAPLGTV-----------YRELQKLSRFDEQRTATYITELANALSYC 128
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQH 547
HS+ + H ++K N+LL + + DF + H ++ Y+ PE I+
Sbjct: 129 HSK----RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 548 QQLSPKSDVYCLGILILEVITGKFP 572
+ K D++ LG+L E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 362 DDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFD 416
+D+DP + + LG G GS Y N G V VK+++ + F+
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 417 AEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLLFLL--HGEKGISHAELN 471
E+ L ++H NI+ + RR+ KL++ EY+P GSL L H E+ I H +L
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAER-IDHIKL- 119
Query: 472 WPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL----- 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 120 ----LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 527 --TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTV--VVKRIREM-NQLGRDTFDAEMRRLGRI-KHPNILA 432
+V+G G G KA + +GL + +KR++E ++ F E+ L ++ HPNI+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGI-----------SHAELNWPTRLNIIKG 481
L R + EY P G+LL L + + + + L+ L+
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM----F 537
VA G+ ++ + + H NL + N+L+ ++YV + DF +V +TM
Sbjct: 148 VARGMDYLSQK----QFIHRNLAARNILVGENYVAKIADFGL-SRGQEVYVKKTMGRLPV 202
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++ E + + + SDV+ G+L+ E+++
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 44 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 156
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 157 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 213 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELN 471
R F +E +G+ HPNI+ R ++V+EYM GSL L G +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG----QFT 149
Query: 472 WPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNP 529
+ +++GV G+ ++ + H +L + NVL+ + V + DF + +P
Sbjct: 150 IMQLVGMLRGVGAGMRYL----SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 530 NHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
+ T + +PE I + S SDV+ G+++ EV+ G+ P ++N
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 138
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 139 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 195 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 440 RDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+ +++EYM G LL +L +L L + K V + ++ S+ +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK----QF 125
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPK 553
H +L + N L++ V + DF + ++ + PE + + + S K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 554 SDVYCLGILILEVIT-GKFPSQYLSNAK 580
SD++ G+L+ E+ + GK P + +N++
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 23 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 135
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 136 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 192 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 24 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 136
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 137 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 193 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 25 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 137
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 138 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 194 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 133
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 134 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 190 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++EYM G LL L + + H L + K V + ++ S+ +
Sbjct: 71 QRPIFIITEYMANGCLLNYL---REMRH-RFQTQQLLEMCKDVCEAMEYLESK----QFL 122
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L++ V + DF + ++ + PE + + + S KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAK 580
D++ G+L+ E+ + GK P + +N++
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++EYM G LL L + + H L + K V + ++ S+ +
Sbjct: 76 QRPIFIITEYMANGCLLNYL---REMRH-RFQTQQLLEMCKDVCEAMEYLESK----QFL 127
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L++ V + DF + ++ + PE + + + S KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAK 580
D++ G+L+ E+ + GK P + +N++
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 45 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 157
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 158 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 214 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++EYM G LL L + + H L + K V + ++ S+ +
Sbjct: 91 QRPIFIITEYMANGCLLNYL---REMRH-RFQTQQLLEMCKDVCEAMEYLESK----QFL 142
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L++ V + DF + ++ + PE + + + S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAK 580
D++ G+L+ E+ + GK P + +N++
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E +G G G +K VV +I ++ + + E+ L + P +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ + + ++ EY+ GS L LL E G L+ I++ + GL ++HSE
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE--- 143
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H ++K++NVLLS+ L DF + + F +++PE I+
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAK 580
K+D++ LGI +E+ G+ P L K
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHPMK 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++EYM G LL L + + H L + K V + ++ S+ +
Sbjct: 82 QRPIFIITEYMANGCLLNYL---REMRH-RFQTQQLLEMCKDVCEAMEYLESK----QFL 133
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L++ V + DF + ++ + PE + + + S KS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAK 580
D++ G+L+ E+ + GK P + +N++
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 138
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 139 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 195 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E +G G G +K VV +I ++ + + E+ L + P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ + + ++ EY+ GS L LL E G L+ I++ + GL ++HSE
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE--- 138
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H ++K++NVLLS+ L DF + + F +++PE I+
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAK 580
K+D++ LGI +E+ G+ P L K
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHPMK 226
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 18 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 130
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNP 529
VA G+ ++ AS + H +L + N +L + + + DF ++ + N
Sbjct: 131 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 187 TG-AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E +G G G +K VV +I ++ + + E+ L + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ + + ++ EY+ GS L LL E G L+ I++ + GL ++HSE
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE--- 123
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H ++K++NVLLS+ L DF + + F +++PE I+
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAK 580
K+D++ LGI +E+ G+ P L K
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMK 211
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 129
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + +F + H ++ Y+ PE I+ + K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 395 NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKG 453
G V VK I+ N F AE + +++H N++ L L +V+EYM KG
Sbjct: 34 RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 91
Query: 454 SLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQD 513
SL+ L + L L V + ++ H +L + NVL+S+D
Sbjct: 92 SLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSED 144
Query: 514 YVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKF 571
V + DF ++ + + +PE ++ S KSDV+ GIL+ E+ + G+
Sbjct: 145 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
Query: 572 P 572
P
Sbjct: 205 P 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 36/273 (13%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E +G G G +K VV +I ++ + + E+ L + P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ + + ++ EY+ GS L LL E G L+ I++ + GL ++HSE
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE--- 123
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H ++K++NVLLS+ L DF + + F +++PE I+
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANA 611
K+D++ LGI +E+ G+ P L K V LI + P + N
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMK--------VLFLIPKNN------PPTLEGNY 228
Query: 612 ENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ V+ AC EP+ R +E LK
Sbjct: 229 SKPLKEFVE------ACLNKEPSFRPTAKELLK 255
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELN 471
R F +E +G+ HPNI+ R ++V+EYM GSL L G +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG----QFT 149
Query: 472 WPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TNP 529
+ +++GV G+ ++ + H +L + NVL+ + V + DF + +P
Sbjct: 150 IMQLVGMLRGVGAGMRYL----SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 530 NHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
+ T + +PE I + S SDV+ G+++ EV+ G+ P ++N
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILAPLA 435
LG G G+ Y A ++ ++ QL + + ++RR ++HPNIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
Y ++ EY P G++ L ++ + I +AN LS+ HS+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF--HPLTNPNHVAQTMFAYISPEYIQHQQLSPK 553
+ H ++K N+LL + +F + H ++ Y+ PE I+ + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 554 SDVYCLGILILEVITGKFP 572
D++ LG+L E + GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 357 LSMINDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTF 415
L M+ D DP L D + +G G G A +G V VK + Q R+
Sbjct: 34 LRMVVDQGDPRLLLD----SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL 89
Query: 416 DAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR 475
E+ + +H N++ + +E V+ E++ G+L + +S LN
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI------VSQVRLNEEQI 143
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT 535
+ + V L+++H++ + H ++KS ++LL+ D L DF F + + +
Sbjct: 144 ATVCEAVLQALAYLHAQ----GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199
Query: 536 MFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNA 579
+++PE I + + D++ LGI+++E++ G+ P Y S++
Sbjct: 200 XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP--YFSDS 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
+ +++EYM G LL L + + H L + K V + ++ S+ +
Sbjct: 91 QRPIFIITEYMANGCLLNYL---REMRH-RFQTQQLLEMCKDVCEAMEYLESK----QFL 142
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKS 554
H +L + N L++ V + DF + ++ + PE + + + S KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 555 DVYCLGILILEVIT-GKFPSQYLSNAK 580
D++ G+L+ E+ + GK P + +N++
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
LG G G V +K I+E + D F E + + + H ++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 440 RDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
+ +++EYM G LL +L +L L + K V + ++ S+ +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK----QF 126
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPK 553
H +L + N L++ V + DF + + + PE + + + S K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 554 SDVYCLGILILEVIT-GKFPSQYLSNAK 580
SD++ G+L+ E+ + GK P + +N++
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 412 RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAEL 470
R F E +G+ HPNI+ + ++V+EYM GSL FL + + +L
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL 126
Query: 471 NWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL--TN 528
+ +++G++ G+ ++ + H +L + N+L++ + V + DF + +
Sbjct: 127 -----VGMLRGISAGMKYL----SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 529 PNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGG 582
P T + +PE I ++ + SDV+ GI++ EV++ G+ P ++N
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ--- 234
Query: 583 IDVVELV 589
DV++ V
Sbjct: 235 -DVIKAV 240
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 368 GLADLMKAAAEVLGNGGLGSSYKAAMANG----LTVVVKRIREMNQLGR-DTFDAEMRRL 422
G + L+ EV+G G G Y + + + VK + + +G F E +
Sbjct: 25 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 423 GRIKHPNILAPLAYHFRRD-EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK- 480
HPN+L+ L R + LVV YM G L + E + PT ++I
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNPTVKDLIGF 137
Query: 481 --GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF------------HPL 526
VA G+ ++ AS + H +L + N +L + + + DF H
Sbjct: 138 GLQVAKGMKYL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 527 TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
T A+ +++ E +Q Q+ + KSDV+ G+L+ E++T P
Sbjct: 194 TG----AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 362 DDKDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFD 416
+D+DP + LG G GS Y N G V VK+++ + F+
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 417 AEMRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNW 472
E+ L ++H NI+ + RR+ KL++ E++P GSL +L ++ I H +L
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSLREYLQKHKERIDHIKL-- 119
Query: 473 PTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL------ 526
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 120 ---LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 527 -TNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTV--VVKRIREM-NQLGRDTFDAEMRRLGRI-KHPNILA 432
+V+G G G KA + +GL + +KR++E ++ F E+ L ++ HPNI+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGI-----------SHAELNWPTRLNIIKG 481
L R + EY P G+LL L + + + + L+ L+
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM----F 537
VA G+ ++ + + H +L + N+L+ ++YV + DF +V +TM
Sbjct: 141 VARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGL-SRGQEVYVKKTMGRLPV 195
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++ E + + + SDV+ G+L+ E+++
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTV--VVKRIREM-NQLGRDTFDAEMRRLGRI-KHPNILA 432
+V+G G G KA + +GL + +KR++E ++ F E+ L ++ HPNI+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGI-----------SHAELNWPTRLNIIKG 481
L R + EY P G+LL L + + + + L+ L+
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM----F 537
VA G+ ++ + + H +L + N+L+ ++YV + DF +V +TM
Sbjct: 151 VARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGL-SRGQEVYVKKTMGRLPV 205
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++ E + + + SDV+ G+L+ E+++
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLAYH 437
+G G G YK + VV +I ++ + + E+ L + P I +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ + ++ EY+ GS L LL L I++ + GL ++HSE
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATILREILKGLDYLHSERKI-- 138
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSPK 553
H ++K++NVLLS+ L DF + + F +++PE I+ K
Sbjct: 139 --HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 554 SDVYCLGILILEVITGKFPS 573
+D++ LGI +E+ G+ P+
Sbjct: 197 ADIWSLGITAIELAKGEPPN 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
+G G G A + G V VK++ Q R+ E+ + H N++ + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 439 RRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYEL 498
DE VV E++ G+L + ++H +N + V LS++H++ +
Sbjct: 113 VGDELWVVMEFLEGGALTDI------VTHTRMNEEQIATVCLSVLRALSYLHNQ----GV 162
Query: 499 PHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLSPKS 554
H ++KS ++LL+ D L DF F + + +++PE I +
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 555 DVYCLGILILEVITGKFP 572
D++ LGI+++E+I G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNILAPL- 434
E +G G G YKA + G V +KRIR ++ T E+ L + HPNI++ +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
H R LV E+M K L + G+ +++ +++GVA+
Sbjct: 87 VIHSERCLTLVF-EFMEKDLKKVLDENKTGLQDSQIK-IYLYQLLRGVAHC--------H 136
Query: 495 SYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPEYIQ-HQ 548
+ + H +LK N+L++ D L DF P+ + H T++ Y +P+ + +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-YRAPDVLMGSK 195
Query: 549 QLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ +G + E+ITGK FP
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILA 432
EV+G G G KA V +K ++ + R F +E +G+ +HPNI+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
++++E+M G+L L ++ + + +++G+A+G+ ++
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYL--- 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---------YISPE 543
A H +L + N+L++ + V + DF N T + + +PE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
I ++ + SD + GI++ EV++ G+ P +SN
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E +G G G +K VV +I ++ + + E+ L + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ + + ++ EY+ GS L LL + E T ++K + GL ++HSE
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIAT---MLKEILKGLDYLHSE--- 139
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H ++K++NVLLS+ L DF + + F +++PE IQ
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 552 PKSDVYCLGILILEVITGKFPS 573
K+D++ LGI +E+ G+ P+
Sbjct: 199 SKADIWSLGITAIELAKGEPPN 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 380 LGNGGLGSSYKAAMAN-GLTVVVKRIREM--NQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
+G G G +K + G V +K+ E + + + E+R L ++KHPN++ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 437 HFRRDEKL-VVSEYMPKGSLLFLLHGEKGISH---AELNWPTRLNIIKGVANGLSFIHSE 492
FRR +L +V EY L L ++G+ + W T ++F H
Sbjct: 71 -FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCH-- 119
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA---YISPE-YIQH 547
+ H ++K N+L+++ V L DF F LT P+ A Y SPE +
Sbjct: 120 --KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 548 QQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGD 595
Q P DV+ +G + E+++G P L K +D + L+ +GD
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG-VP---LWPGKSDVDQLYLIRKTLGD 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMF---AYIS 541
+HS ++ H +LK N++L VP + DF + + + +F A+++
Sbjct: 130 LHS----LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEM 419
DP + + LG G GS Y N G V VK+++ + F+ E+
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 420 RRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTR 475
L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL----- 116
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA----------FHP 525
L + G+ ++ + H +L + N+L+ + +GDF F
Sbjct: 117 LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 526 LTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+ P ++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 173 VKEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 364 KDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAE 418
+DP + + LG G GS Y N G V VK+++ + F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 419 MRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPT 474
+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL---- 115
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------T 527
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 116 -LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 170
Query: 528 NPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 44/271 (16%)
Query: 393 MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNIL-------APLAYHFRRDEKLV 445
N + V V ++R+ + F+ E RL HPN+L +P A H +
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH-----PTL 86
Query: 446 VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKS 505
++ + P GSL +LH +G + ++ + A G +F+H+ +P L S
Sbjct: 87 ITHWXPYGSLYNVLH--EGTNFV-VDQSQAVKFALDXARGXAFLHT--LEPLIPRHALNS 141
Query: 506 SNVLLSQDYVPLL--GDFAFHPLTNPNHVAQTMFAYISPEYIQHQQLSP---KSDVYCLG 560
+V + +D + D F +P A+++PE +Q + +D +
Sbjct: 142 RSVXIDEDXTARISXADVKFS-FQSPGRXYAP--AWVAPEALQKKPEDTNRRSADXWSFA 198
Query: 561 ILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSIGMMVQ 620
+L+ E++T + P LSN + G V +L G + + I P +S +
Sbjct: 199 VLLWELVTREVPFADLSNXEIGXKV-----ALEGLRPTIPPGISPHVS-----------K 242
Query: 621 LLKIGLACTESEPAKRLDLEEALKMIEEIHD 651
L KI C +PAKR + + ++E+ D
Sbjct: 243 LXKI---CXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNILAPL- 434
E +G G G YKA + G V +KRIR ++ T E+ L + HPNI++ +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
H R LV E+M K L + G+ +++ +++GVA+
Sbjct: 87 VIHSERCLTLVF-EFMEKDLKKVLDENKTGLQDSQIK-IYLYQLLRGVAHC--------H 136
Query: 495 SYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPEYIQ-HQ 548
+ + H +LK N+L++ D L DF P+ + H T++ Y +P+ + +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-YRAPDVLMGSK 195
Query: 549 QLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ +G + E+ITGK FP
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 364 KDPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAE 418
+DP + + LG G GS Y N G V VK+++ + F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 419 MRRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPT 474
+ L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL---- 116
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------T 527
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 117 -LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 528 NPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 46/221 (20%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD-----TFDAEMRRLGRIKHPNIL 431
E+LG GG+ + A + + V VK +R L RD F E + + HP I+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 432 A------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR-LNI 478
A PL Y +V EY+ +L ++H E ++ P R + +
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRAIEV 121
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVAQTM 536
I L+F H + H ++K +N+L+S + DF A + N V QT
Sbjct: 122 IADACQALNFSHQNG----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 537 FA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 378 EVLGNGGLGS----SYKAAMANGLTVVVKRIRE-MNQLGRDTFDAEMRRLGRIKHPNILA 432
EV+G G G KA V +K ++ + R F +E +G+ +HPNI+
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
++++E+M G+L L ++ + + +++G+A+G+ ++
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYL--- 134
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---------YISPE 543
A H +L + N+L++ + V + DF N T + + +PE
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
I ++ + SD + GI++ EV++ G+ P +SN
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG G GS YKA G V +K++ + L E+ + + P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGS 92
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLH-GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+F+ + +V EY GS+ ++ K ++ E+ I++ GL ++H
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA-----TILQSTLKGLEYLHF---- 143
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF-----HPLTNPNHVAQTMFAYISPEYIQHQQL 550
H ++K+ N+LL+ + L DF + N V T F +++PE IQ
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF-WMAPEVIQEIGY 202
Query: 551 SPKSDVYCLGILILEVITGKFP 572
+ +D++ LGI +E+ GK P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 46/221 (20%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD-----TFDAEMRRLGRIKHPNIL 431
E+LG GG+ + A + + V VK +R L RD F E + + HP I+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 432 A------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR-LNI 478
A PL Y +V EY+ +L ++H E ++ P R + +
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRAIEV 121
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVAQTM 536
I L+F H + H ++K +N+++S + DF A + N V QT
Sbjct: 122 IADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 537 FA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 46/221 (20%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD-----TFDAEMRRLGRIKHPNIL 431
E+LG GG+ + A + + V VK +R L RD F E + + HP I+
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 432 A------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR-LNI 478
A PL Y +V EY+ +L ++H E ++ P R + +
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRAIEV 121
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVAQTM 536
I L+F H + H ++K +N+++S + DF A + N V QT
Sbjct: 122 IADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 537 FA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEM 419
DP + + LG G GS Y N G V VK+++ + F+ E+
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 60
Query: 420 RRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTR 475
L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 61 EILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL----- 114
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------TN 528
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 115 LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 529 PNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEM 419
DP + + LG G GS Y N G V VK+++ + F+ E+
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 420 RRLGRIKHPNILAPLAYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTR 475
L ++H NI+ + RR+ KL++ EY+P GSL +L ++ I H +L
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL----- 116
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------TN 528
L + G+ ++ + H +L + N+L+ + +GDF +
Sbjct: 117 LQYTSQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 529 PNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
++ + +PE + + S SDV+ G+++ E+ T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG+G G YKA G K I ++ + + E+ L HP I+ L ++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 439 RRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ ++ E+ P G++ +L ++G++ ++ + + + L+F+HS+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK----R 129
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFA-----FHPLTNPNHVAQTMFAYISPEYIQHQQL-- 550
+ H +LK+ NVL++ + L DF L + T + +++PE + + +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAPEVVMCETMKD 188
Query: 551 SP---KSDVYCLGILILEVITGKFPSQYLS 577
+P K+D++ LGI ++E+ + P L+
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELN 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHF 438
LG+G G YKA G K I ++ + + E+ L HP I+ L ++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 439 RRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ ++ E+ P G++ +L ++G++ ++ + + + L+F+HS+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK----R 137
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFA-----FHPLTNPNHVAQTMFAYISPEYIQHQQL-- 550
+ H +LK+ NVL++ + L DF L + T + +++PE + + +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAPEVVMCETMKD 196
Query: 551 SP---KSDVYCLGILILEVITGKFPSQYLS 577
+P K+D++ LGI ++E+ + P L+
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELN 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 378 EVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHPN 429
+ LG G G +A A G L V VK ++ ++ +E++ + + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK---------GISHAELNWPTRLNIIK 480
I+ L LV++EY G LL L + I+++ L+ L+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQ 534
VA G++F+ AS H ++ + NVLL+ +V +GDF A + + N++ A+
Sbjct: 172 QVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 535 TMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIG 594
+++PE I + +SDV+ GIL+ E+ + N GI V L+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGILVNSKFYKLVK 281
Query: 595 DQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEE 648
D ++A+ A A +I ++Q AC EP R ++ ++E
Sbjct: 282 DGYQMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQE 323
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 128
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 128
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 129/281 (45%), Gaps = 40/281 (14%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPNI 430
E LG+G K + GL K I++ + R+ + E+ L ++ HPNI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ + R + +++ E + G L L ++ +S E + IK + +G++++H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYLH 132
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISPE 543
++ ++ H +LK N++L +P+ L DF + +F +++PE
Sbjct: 133 TK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 544 YIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELI 603
+ ++ L ++D++ +G++ +++G P +L + K + + ++++ D D
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITAVSYDFD------ 238
Query: 604 DPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 EEFFSQTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
LG G GS Y N G V VK+++ + F+ E+ L ++H NI+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 435 AYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ RR+ KL++ EY+P GSL +L ++ I H +L L + G+ ++
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL- 148
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------TNPNHVAQTMFAYISPE 543
+ H +L + N+L+ + +GDF + ++ + +PE
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
+ + S SDV+ G+++ E+ T
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
LG G GS Y N G V VK+++ + F+ E+ L ++H NI+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 435 AYHF---RRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ RR+ KL++ EY+P GSL +L ++ I H +L L + G+ ++
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL- 148
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL-------TNPNHVAQTMFAYISPE 543
+ H +L + N+L+ + +GDF + ++ + +PE
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
+ + S SDV+ G+++ E+ T
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 376 AAEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHP 428
E LG+G K + GL K I++ + R+ + E+ L I+HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
N++ + + + +++ E + G L L ++ ++ E +K + NG+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YIS 541
+H S ++ H +LK N++L VP + DF + + + +F +++
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE + ++ L ++D++ +G++ +++G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 378 EVLGNGGLGSSYKAAM-----ANGLTVVVKRIREMNQLGRDTFDA---EMRRLGRIKHPN 429
+VLG+G G+ +K + + V +K I + + GR +F A M +G + H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 94
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAE--LNWPTRLNIIKGVANGLS 487
I+ L +LV ++Y+P GSLL + +G + LNW + +A G+
Sbjct: 95 IVRLLGLCPGSSLQLV-TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 147
Query: 488 FIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN------HVAQTMFAYIS 541
++ + + H NL + NVLL + DF L P+ A+T +++
Sbjct: 148 YLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVIT 568
E I + + +SDV+ G+ + E++T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 378 EVLGNGGLGSSYKAAM-----ANGLTVVVKRIREMNQLGRDTFDA---EMRRLGRIKHPN 429
+VLG+G G+ +K + + V +K I + + GR +F A M +G + H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAE--LNWPTRLNIIKGVANGLS 487
I+ L +LV ++Y+P GSLL + +G + LNW + +A G+
Sbjct: 77 IVRLLGLCPGSSLQLV-TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 129
Query: 488 FIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN------HVAQTMFAYIS 541
++ + + H NL + NVLL + DF L P+ A+T +++
Sbjct: 130 YLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVIT 568
E I + + +SDV+ G+ + E++T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 52/224 (23%)
Query: 378 EVLGNGGLGSSYKAAMANGLT----VVVKRIREMNQLGRD-----TFDAEMRRLGRIKHP 428
E+LG GG+ + +A L V VK +R L RD F E + + HP
Sbjct: 18 EILGFGGMSEVH---LARDLRLHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHP 72
Query: 429 NILA------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR- 475
I+A PL Y +V EY+ +L ++H E ++ P R
Sbjct: 73 AIVAVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRA 118
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVA 533
+ +I L+F H + H ++K +N+++S + DF A + N V
Sbjct: 119 IEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 534 QTMFA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
QT Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 52/224 (23%)
Query: 378 EVLGNGGLGSSYKAAMANGLT----VVVKRIREMNQLGRD-----TFDAEMRRLGRIKHP 428
E+LG GG+ + +A L V VK +R L RD F E + + HP
Sbjct: 18 EILGFGGMSEVH---LARDLRLHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHP 72
Query: 429 NILA------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR- 475
I+A PL Y +V EY+ +L ++H E ++ P R
Sbjct: 73 AIVAVYATGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRA 118
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVA 533
+ +I L+F H + H ++K +N+++S + DF A + N V
Sbjct: 119 IEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 534 QTMFA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
QT Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR---EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+G G Y+AA + +G+ V +K+++ M+ R E+ L ++ HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLH---GEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+E +V E G L ++ +K + W + + + L +HS
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL----CSALEHMHSR 155
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFA----FHPLTNPNHVAQTMFAYISPEYIQHQ 548
+ H ++K +NV ++ V LGD F T H Y+SPE I
Sbjct: 156 ----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+ KSD++ LG L+ E+ + P
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 44/231 (19%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLA 435
E++G G G+ YK ++ + V VK N R F + + R+ ++H NI +
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 436 YHFR-----RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
R R E L+V EY P GSL K +S +W + + V GL+++H
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLX------KYLSLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 491 SEFASYE-----LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT---------- 535
+E + + H +L S NVL+ D ++ DF N + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 536 --MFAYISPEYIQ-------HQQLSPKSDVYCLGILILEVI---TGKFPSQ 574
Y++PE ++ + + D+Y LG++ E+ T FP +
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
VLG G G Y ++N + + +K I E + E+ +KH NI+ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E +P GSL LL + G + N T K + GL ++H +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDN----Q 128
Query: 498 LPHGNLKSSNVLL-SQDYVPLLGDFAFHP-LTNPNHVAQTM---FAYISPEYIQH--QQL 550
+ H ++K NVL+ + V + DF L N +T Y++PE I +
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 551 SPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
+D++ LG I+E+ TGK P L + + V + +V I +SA
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--------KVHPEIPESMSAE 240
Query: 611 AENSIGMMVQLLKIGLACTESEPAKR 636
A+ I L C E +P KR
Sbjct: 241 AKAFI----------LKCFEPDPDKR 256
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 46/221 (20%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD-----TFDAEMRRLGRIKHPNIL 431
E+LG GG+ + A + V VK +R L RD F E + + HP I+
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHPAIV 92
Query: 432 A------------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR-LNI 478
A PL Y +V EY+ +L ++H E ++ P R + +
Sbjct: 93 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTEGPMT------PKRAIEV 138
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHVAQTM 536
I L+F H + H ++K +N+++S + DF A + N V QT
Sbjct: 139 IADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 537 FA-----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y+SPE + + +SDVY LG ++ EV+TG+ P
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
VLG G G Y ++N + + +K I E + E+ +KH NI+ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E +P GSL LL + G + N T K + GL ++H +
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDN----Q 142
Query: 498 LPHGNLKSSNVLL-SQDYVPLLGDFAFHP-LTNPNHVAQTM---FAYISPEYIQH--QQL 550
+ H ++K NVL+ + V + DF L N +T Y++PE I +
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 551 SPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
+D++ LG I+E+ TGK P L + + V + +V I +SA
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--------KVHPEIPESMSAE 254
Query: 611 AENSIGMMVQLLKIGLACTESEPAKR 636
A+ I L C E +P KR
Sbjct: 255 AKAFI----------LKCFEPDPDKR 270
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
E+ G G +KA + N V +I + + E+ +KH N+L +A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAV--KIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 438 FRRD----EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
R E +++ + KGSL L G + W ++ + ++ GLS++H +
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLHEDV 132
Query: 494 ASYE-------LPHGNLKSSNVLLSQDYVPLLGDFA----FHPLTNP--NHVAQTMFAYI 540
+ H + KS NVLL D +L DF F P P H Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 541 SPEYIQ-----HQQLSPKSDVYCLGILILEVIT 568
+PE ++ + + D+Y +G+++ E+++
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 378 EVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHPN 429
+ LG G G +A A G L V VK ++ ++ +E++ + + +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLL-FL------LHGEKGISHAELNWPTR--LNIIK 480
I+ L LV++EY G LL FL L + + A TR L+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQ 534
VA G++F+ AS H ++ + NVLL+ +V +GDF A + + N++ A+
Sbjct: 172 QVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 535 TMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIG 594
+++PE I + +SDV+ GIL+ E+ + N GI V L+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGILVNSKFYKLVK 281
Query: 595 DQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEE 648
D ++A+ A A +I ++Q AC EP R ++ ++E
Sbjct: 282 DGYQMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQE 323
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 47/297 (15%)
Query: 377 AEVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHP 428
+ LG G G +A A G L V VK ++ ++ +E++ + + +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L LV++EY G LL L ++ G+ ++ +L+ L+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV--- 532
VA G++F+ AS H ++ + NVLL+ +V +GDF A + + N++
Sbjct: 171 FSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 533 -AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
A+ +++PE I + +SDV+ GIL+ E+ + N GI V
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGILVNSKFYK 280
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEE 648
L+ D ++A+ A A +I ++Q AC EP R ++ ++E
Sbjct: 281 LVKDGYQMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQE 325
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 369 LADLMKAAAEVLGNGGLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRL 422
+ADL +L G G+ K +A G V VK I ++N E+R +
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 60
Query: 423 GRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGV 482
+ HPNI+ +V EY G + L ++H + + +
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGWMKEKEARAKFRQI 115
Query: 483 ANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---Y 539
+ + + H +F + H +LK+ N+LL D + DF F + T Y
Sbjct: 116 VSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 171
Query: 540 ISPEYIQHQQLS-PKSDVYCLGILILEVITGKFP 572
+PE Q ++ P+ DV+ LG+++ +++G P
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHP 428
+ LG G G +A A G L V VK ++ ++ +E++ + + +H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRL----NIIKGVA 483
NI+ L LV++EY G LL FL + E P L + VA
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQTMF 537
G++F+ AS H ++ + NVLL+ +V +GDF A + + N++ A+
Sbjct: 163 QGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQD 597
+++PE I + +SDV+ GIL+ E+ + N GI V L+ D
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGILVNSKFYKLVKDGY 272
Query: 598 RVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEE 648
++A+ A A +I ++Q AC EP R ++ ++E
Sbjct: 273 QMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQE 311
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHP 428
+ LG G G +A A G L V VK ++ ++ +E++ + + +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTRL----NIIKGVA 483
NI+ L LV++EY G LL FL + E P L + VA
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQTMF 537
G++F+ AS H ++ + NVLL+ +V +GDF A + + N++ A+
Sbjct: 171 QGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 538 AYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQD 597
+++PE I + +SDV+ GIL+ E+ + N GI V L+ D
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGILVNSKFYKLVKDGY 280
Query: 598 RVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEE 648
++A+ A A +I ++Q AC EP R ++ ++E
Sbjct: 281 QMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQE 319
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 378 EVLGNGGLGSSYKAAMA----NGLTVVVKRIREMNQLGRDTFDAEMRR--LGRIKHPNIL 431
+VLG G G + +G +K +++ RD +M R L + HP ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 432 APLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
L Y F+ + KL ++ +++ G L L E + ++ + + +A GL +H
Sbjct: 94 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S Y +LK N+LL ++ L DF + F Y++PE +
Sbjct: 148 SLGIIYR----DLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 547 HQQLSPKSDVYCLGILILEVITGKFPSQ 574
Q S +D + G+L+ E++TG P Q
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 57/294 (19%)
Query: 378 EVLGNGGLGSSYKAAM----ANGLTVVVK---RIREMNQLGRDTFDAEMRRLGRIKHPNI 430
V+G G G Y N + +K RI EM Q+ + F E + + HPN+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHPNV 84
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGE--KGISHAELNWPTRLNIIK---GVANG 485
LA + ++ E +P L ++ HG+ + I + N PT ++I VA G
Sbjct: 85 LALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRN-PTVKDLISFGLQVARG 136
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA---------FHPLTNPNHVAQTM 536
+ ++ A + H +L + N +L + + + DF ++ + H A+
Sbjct: 137 MEYL----AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH-ARLP 191
Query: 537 FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSSLIGD 595
+ + E +Q + + KSDV+ G+L+ E++T G P ++ ID +L L
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH-------IDPFDLTHFLA-- 242
Query: 596 QDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
Q R L PE ++ L ++ C E++PA R + +E+I
Sbjct: 243 QGR--RLPQPEYCPDS---------LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 379 VLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEM---RRLGRIKHPNILAPL 434
VLG G G A + G VK +++ L D + M R L ++ L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 435 AYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
F+ ++L V E++ G L+F + + A + + + L F+H +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-----YAAEIISALMFLHDKG 144
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQ 549
Y +LK NVLL + L DF N V F YI+PE +Q
Sbjct: 145 IIYR----DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 550 LSPKSDVYCLGILILEVITGKFPSQ 574
P D + +G+L+ E++ G P +
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 384 GLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEK 443
G G Y A + R + R+ + E+ L I+HPNI+ + +
Sbjct: 49 GTGKEYAAKFIKKRRLXSSR----RGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 104
Query: 444 LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNL 503
+++ E + G L L ++ ++ E +K + +G+ ++HS+ + H +L
Sbjct: 105 VLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSK----RIAHFDL 155
Query: 504 KSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLSPKSDV 556
K N++L VP L DF + + +F +++PE + ++ L ++D+
Sbjct: 156 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 215
Query: 557 YCLGILILEVITGKFP 572
+ +G++ +++G P
Sbjct: 216 WSIGVITYILLSGASP 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 30/233 (12%)
Query: 356 DLSMINDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTF 415
DLS + +DP G+ +L+ E++GNG G YK + ++ ++ +
Sbjct: 15 DLSAL---RDPAGIFELV----ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI 67
Query: 416 DAEMRRLGRIKHPNILAPLAYHFRR-------DEKLVVSEYMPKGSLLFLLHGEKGISHA 468
E+ L + H +A F + D+ +V E+ GS+ L+ KG +
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 469 ELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTN 528
E W I + + GLS +H +++ H ++K NVLL+++ L DF +
Sbjct: 128 E-EWIA--YICREILRGLSHLHQ----HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 529 PNHVAQTMFA----YISPEYIQHQQ-----LSPKSDVYCLGILILEVITGKFP 572
+ F +++PE I + KSD++ LGI +E+ G P
Sbjct: 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 97/263 (36%), Gaps = 77/263 (29%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMN-QLGRDTFDAEMRRLGRIKHPNIL---- 431
+ +G GG G ++A + +KRIR N +L R+ E++ L +++HP I+
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
Query: 432 -----APLAYHFRRDE---------------------------------KLVVSEYMPKG 453
P + DE K V + P
Sbjct: 72 AWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSS 131
Query: 454 SLLFLLHGEKGISHAEL-NWPTR------------LNIIKGVANGLSFIHSEFASYELPH 500
++L + L +W R L+I +A + F+HS+ L H
Sbjct: 132 PKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK----GLMH 187
Query: 501 GNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----------------YISPEY 544
+LK SN+ + D V +GDF + + QT+ Y+SPE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 545 IQHQQLSPKSDVYCLGILILEVI 567
I S K D++ LG+++ E++
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMANGLTV---VVKRIREMNQLGRDTFDA---EMRRLGRIKHPNILA 432
+L G G+ K +A + V RI + QL + E+R + + HPNI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+V EY G + L ++H + + + + + + H +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQ 549
F + H +LK+ N+LL D + DF F + T N + + + Y +PE Q ++
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
P+ DV+ LG+++ +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPN 429
E LG+G K + GL K I++ + R+ + E+ L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ + R + +++ E + G L L ++ +S E + IK + +G++++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISP 542
H++ ++ H +LK N++L +P+ L DF + +F +++P
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 543 EYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
E + ++ L ++D++ +G++ +++G P +L + K + + ++S+ D D
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITSVSYDFD----- 238
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 -EEFFSHTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 126/297 (42%), Gaps = 41/297 (13%)
Query: 369 LADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDT--------FDAEMR 420
LAD + +G GG G +K + +VV + + +T F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ + HPNI+ Y + +V E++P G L L + +H + W +L ++
Sbjct: 76 IMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDK---AHP-IKWSVKLRLML 129
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQ--DYVPLLGDFAFHPLTNPN-HVAQTM- 536
+A G+ ++ ++ + + H +L+S N+ L + P+ A L+ + H +
Sbjct: 130 DIALGIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLL 187
Query: 537 --FAYISPEYI--QHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSL 592
F +++PE I + + + K+D Y +++ ++TG+ P + + G I + ++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFINMIRE- 244
Query: 593 IGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
E + P I + + +++L C +P KR +K + E+
Sbjct: 245 --------EGLRPTIPEDCPPRLRNVIEL------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L +++I V GL+++ + ++
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLREK---HK 144
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 203
Query: 555 DVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGD 595
D++ +G+ ++E+ G++P + + G + + EL+ ++ +
Sbjct: 204 DIWSMGLSLVEMAVGRYP---IGSGSGSMAIFELLDYIVNE 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 384 GLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEK 443
G G Y A + R + R+ + E+ L I+HPNI+ + +
Sbjct: 28 GTGKEYAAKFIKKRRLSSSR----RGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83
Query: 444 LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNL 503
+++ E + G L L ++ ++ E +K + +G+ ++HS+ + H +L
Sbjct: 84 VLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSK----RIAHFDL 134
Query: 504 KSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLSPKSDV 556
K N++L VP L DF + + +F +++PE + ++ L ++D+
Sbjct: 135 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 194
Query: 557 YCLGILILEVITGKFP 572
+ +G++ +++G P
Sbjct: 195 WSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 384 GLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEK 443
G G Y A + R + R+ + E+ L I+HPNI+ + +
Sbjct: 35 GTGKEYAAKFIKKRRLSSSR----RGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 90
Query: 444 LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNL 503
+++ E + G L L ++ ++ E +K + +G+ ++HS+ + H +L
Sbjct: 91 VLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSK----RIAHFDL 141
Query: 504 KSSNVLLSQDYVP----LLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLSPKSDV 556
K N++L VP L DF + + +F +++PE + ++ L ++D+
Sbjct: 142 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 557 YCLGILILEVITGKFP 572
+ +G++ +++G P
Sbjct: 202 WSIGVITYILLSGASP 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILA 432
+L G G+ K +A G V VK I ++N E+R + + HPNI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+V EY G + L ++H + + + + + + H +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQ 549
F + H +LK+ N+LL D + DF F + T N + A Y +PE Q ++
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
P+ DV+ LG+++ +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPN 429
E LG+G K + GL K I++ + R+ + E+ L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ + R + +++ E + G L L ++ +S E + IK + +G++++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISP 542
H++ ++ H +LK N++L +P+ L DF + +F +++P
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 543 EYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
E + ++ L ++D++ +G++ +++G P +L + K + + ++S+ D D
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITSVSYDFD----- 238
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 -EEFFSHTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 125/297 (42%), Gaps = 41/297 (13%)
Query: 369 LADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDT--------FDAEMR 420
LAD + +G GG G +K + +VV + + +T F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ + HPNI+ Y + +V E++P G L L + +H + W +L ++
Sbjct: 76 IMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDK---AHP-IKWSVKLRLML 129
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQ--DYVPLLGDFAFHPLTNPN-HVAQTM- 536
+A G+ ++ ++ + + H +L+S N+ L + P+ A L+ + H +
Sbjct: 130 DIALGIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL 187
Query: 537 --FAYISPEYI--QHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSL 592
F +++PE I + + + K+D Y +++ ++TG+ P S K I + ++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--IKFINMIRE- 244
Query: 593 IGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
E + P I + + +++L C +P KR +K + E+
Sbjct: 245 --------EGLRPTIPEDCPPRLRNVIEL------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPN 429
E LG+G K + GL K I++ + R+ + E+ L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ + R + +++ E + G L L ++ +S E + IK + +G++++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISP 542
H++ ++ H +LK N++L +P+ L DF + +F +++P
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 543 EYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
E + ++ L ++D++ +G++ +++G P +L + K + + ++S+ D D
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITSVSYDFD----- 238
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 -EEFFSHTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPN 429
E LG+G K + GL K I++ + R+ + E+ L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ + R + +++ E + G L L ++ +S E + IK + +G++++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISP 542
H++ ++ H +LK N++L +P+ L DF + +F +++P
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 543 EYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
E + ++ L ++D++ +G++ +++G P +L + K + + ++++ D D
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITAVSYDFD----- 238
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 -EEFFSQTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 78 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + ++V Q FA+ +PE
Sbjct: 133 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 123/297 (41%), Gaps = 41/297 (13%)
Query: 369 LADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDT--------FDAEMR 420
LAD + +G GG G +K + +VV + + +T F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ + HPNI+ Y + +V E++P G L L + +H + W +L ++
Sbjct: 76 IMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDK---AHP-IKWSVKLRLML 129
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQ--DYVPLLGDFA-FHPLTNPNHVAQTM- 536
+A G+ ++ ++ + + H +L+S N+ L + P+ A F H +
Sbjct: 130 DIALGIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLL 187
Query: 537 --FAYISPEYI--QHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSL 592
F +++PE I + + + K+D Y +++ ++TG+ P S K I + ++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--IKFINMIRE- 244
Query: 593 IGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
E + P I + + +++L C +P KR +K + E+
Sbjct: 245 --------EGLRPTIPEDCPPRLRNVIEL------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMANGLTV---VVKRIREMNQLGRDTFDA---EMRRLGRIKHPNILA 432
+L G G+ K +A + V RI + QL + E+R + + HPNI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+V EY G + L ++H + + + + + + H +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
F + H +LK+ N+LL D + DF F + T Y +PE Q ++
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
P+ DV+ LG+++ +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQ------LGRDTFDAEMRRLGRIKHPN 429
E LG+G K + GL K I++ + R+ + E+ L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ + R + +++ E + G L L ++ +S E + IK + +G++++
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAFHPLTNPNHVAQTMFA---YISP 542
H++ ++ H +LK N++L +P+ L DF + +F +++P
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 543 EYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
E + ++ L ++D++ +G++ +++G P +L + K + + ++++ D D
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQ--ETLANITAVSYDFD----- 238
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+ S +E + + +LL E KRL ++EAL+
Sbjct: 239 -EEFFSQTSELAKDFIRKLLV-------KETRKRLTIQEALR 272
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 88
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 149 CTYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 256
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 257 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 84 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + ++V Q FA+ +PE
Sbjct: 139 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 78 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + ++V Q FA+ +PE
Sbjct: 133 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 53/301 (17%)
Query: 377 AEVLGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLG-RDTFDAEMRRLGRI-KH 427
+ LG G G +A A GL TV VK ++ L R+ +E++ L + H
Sbjct: 51 GKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL----------- 476
NI+ L LV++EY G LL L ++ P +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 477 --NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV 532
+ VA G++F+ AS H +L + N+LL+ + + DF A H + N+V
Sbjct: 170 LLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 533 ----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
A+ +++PE I + + +SDV+ GI + E+ + G P G+ V
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 278
Query: 588 LVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
+I + R ++ PE A AE M ++K C +++P KR ++ +++IE
Sbjct: 279 KFYKMIKEGFR---MLSPE-HAPAE-----MYDIMK---TCWDADPLKRPTFKQIVQLIE 326
Query: 648 E 648
+
Sbjct: 327 K 327
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 74 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + ++V Q FA+ +PE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRI-REMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG+G G + ++GL V+K I ++ +Q+ + +AE+ L + HPNI+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+V E G LL + + A L+ ++K + N L++ HS+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFHSQ----H 144
Query: 498 LPHGNLKSSNVLLSQDYVP----LLGDFAFHPL----TNPNHVAQTMFAYISPEYIQHQQ 549
+ H +LK N+L QD P + DF L + + A T Y++PE + +
Sbjct: 145 VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL-YMAPEVFK-RD 201
Query: 550 LSPKSDVYCLGILILEVITGKFP 572
++ K D++ G+++ ++TG P
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 93
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 154 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 261
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 262 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 90
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 151 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 258
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 259 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 74 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + ++V Q FA+ +PE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILA 432
+L G G+ K +A G V VK I ++N E+R + + HPNI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+V EY G + L ++H + + + + + + H +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
F + H +LK+ N+LL D + DF F + T Y +PE Q ++
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
P+ DV+ LG+++ +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILA 432
+L G G+ K +A G V VK I ++N E+R + + HPNI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+V EY G + L ++H + + + + + + H +
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
F + H +LK+ N+LL D + DF F + T Y +PE Q ++
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
P+ DV+ LG+++ +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEEDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 378 EVLGNGGLGSSYKAAMANGLTV----VVKRIREMNQLGRDTFDAEMRR--LGRIKHPNIL 431
+VLG G G + +G +K +++ RD +M R L + HP I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 432 APLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
L Y F+ + KL ++ +++ G L L E + ++ + + +A L +H
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S Y +LK N+LL ++ L DF + + F Y++PE +
Sbjct: 144 SLGIIYR----DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 547 HQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPE 606
+ + +D + G+L+ E++TG P Q G D E ++ ++ + + + + PE
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQ-------GKDRKETMTMILKAKLGMPQFLSPE 252
Query: 607 ISA 609
+
Sbjct: 253 AQS 255
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 380 LGNGGLGS-SYKAAMANGLTVVVKRIREMNQLGRDTF--DAEMRRLGRIKHPNILAPLAY 436
LG GG + +G +KRI Q R+ +A+M RL HPNIL +AY
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAY 94
Query: 437 HFR----RDEKLVVSEYMPKGSLLFLLH--GEKG--ISHAELNWPTRLNIIKGVANGLSF 488
R + E ++ + +G+L + +KG ++ ++ W ++ G+ GL
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEA 149
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF------------AFHPLTNPNHVAQ-T 535
IH++ + H +LK +N+LL + P+L D + LT + AQ
Sbjct: 150 IHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 536 MFAYISPEYI---QHQQLSPKSDVYCLGILILEVITGKFP 572
+Y +PE H + ++DV+ LG ++ ++ G+ P
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 147
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 208 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 315
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 316 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
E LG+G G ++ A G V K I L + T E+ + ++ HP ++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEK-GISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ E +++ E++ G L + E +S AE+ +N ++ GL +H
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV-----INYMRQACEGLKHMHE---- 167
Query: 496 YELPHGNLKSSNVLLSQDYVPLLG--DFAFHPLTNPNHVAQTMFA---YISPEYIQHQQL 550
+ + H ++K N++ + DF NP+ + + A + +PE + + +
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227
Query: 551 SPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISAN 610
+D++ +G+L +++G P G D +E + ++ E +S
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPF-------AGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280
Query: 611 AENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
A++ I ++Q EP KRL + +AL+
Sbjct: 281 AKDFIKNLLQ----------KEPRKRLTVHDALE 304
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 19/199 (9%)
Query: 384 GLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
G G+ K +A G V VK I ++N E+R + + HPNI+
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI 83
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+V EY G + L ++H + + + + + + H ++
Sbjct: 84 ETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKY---- 134
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLS-PK 553
+ H +LK+ N+LL D + DF F + T Y +PE Q ++ P+
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 554 SDVYCLGILILEVITGKFP 572
DV+ LG+++ +++G P
Sbjct: 195 VDVWSLGVILYTLVSGSLP 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ EY KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N + +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 378 EVLGNGGLGSSYKAAMANGLTV----VVKRIREMNQLGRDTFDAEMRR--LGRIKHPNIL 431
+VLG G G + +G +K +++ RD +M R L + HP I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 432 APLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
L Y F+ + KL ++ +++ G L L E + ++ + + +A L +H
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S Y +LK N+LL ++ L DF + + F Y++PE +
Sbjct: 144 SLGIIYR----DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 547 HQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPE 606
+ + +D + G+L+ E++TG P Q G D E ++ ++ + + + + PE
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQ-------GKDRKETMTMILKAKLGMPQFLSPE 252
Query: 607 ISA 609
+
Sbjct: 253 AQS 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK-----------GISHAELNWPTRLN 477
NI+ L + V+ EY KG+L L + + ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N + +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 378 EVLGNGGLGSSYKAAMANGLTV----VVKRIREMNQLGRDTFDAEMRR--LGRIKHPNIL 431
+VLG G G + +G +K +++ RD +M R L + HP I+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 432 APLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
L Y F+ + KL ++ +++ G L L E + ++ + + +A L +H
Sbjct: 91 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 144
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S Y +LK N+LL ++ L DF + + F Y++PE +
Sbjct: 145 SLGIIYR----DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 547 HQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPE 606
+ + +D + G+L+ E++TG P Q G D E ++ ++ + + + + PE
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQ-------GKDRKETMTMILKAKLGMPQFLSPE 253
Query: 607 ISA 609
+
Sbjct: 254 AQS 256
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 19/199 (9%)
Query: 384 GLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
G G+ K +A G V VK I ++N E+R + HPNI+
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVI 82
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+V EY G + L ++H + + + + + H +F
Sbjct: 83 ETEKTLYLVXEYASGGEVFDYL-----VAHGRXKEKEARAKFRQIVSAVQYCHQKF---- 133
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLS-PK 553
+ H +LK+ N+LL D + DF F + T N + A Y +PE Q ++ P+
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 554 SDVYCLGILILEVITGKFP 572
DV+ LG+++ +++G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 381 GNGGLGSSYKAAMANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFR 439
GNGG+ + + +GL + K I E+ R+ E++ L P I+ +
Sbjct: 27 GNGGVVTKVQHR-PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 85
Query: 440 RDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELP 499
E + E+M GSL +L K I L + V GL+++ + +++
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREK---HQIM 137
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKSDV 556
H ++K SN+L++ L DF + N T +Y++PE +Q S +SD+
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMAPERLQGTHYSVQSDI 196
Query: 557 YCLGILILEVITGKFP 572
+ +G+ ++E+ G++P
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 84 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + + V Q FA+ +PE
Sbjct: 139 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 378 EVLGNGGLG----SSYKAAMANGLTVVVKRIRE--MNQ-LGRDTFDAEMRRLGRIKHPNI 430
E LG+G G + A ++V VK ++ ++Q D F E+ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ K+V +E P GSLL L +G H L +R + VA G+ ++
Sbjct: 74 IRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHVAQTM----FAYISPE 543
S+ H +L + N+LL+ + +GDF P + + V Q FA+ +PE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 544 YIQHQQLSPKSDVYCLGILILEVIT 568
++ + S SD + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 74
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 129
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 130 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 124
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 125 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 124
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 125 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L +++I V GL+++ + ++
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLREK---HK 187
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 246
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 247 DIWSMGLSLVEMAVGRYP 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 152
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 211
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 212 DIWSMGLSLVEMAVGRYP 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 125
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 184
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 125
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 184
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 125
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 184
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ Y KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 125
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 184
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L +++I V GL+++ + ++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLREK---HK 125
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF + N T +Y+SPE +Q S +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERLQGTHYSVQS 184
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 124
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 125 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 21/232 (9%)
Query: 367 FGLADLMKAAAEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQL-GRDTFDAEMRR 421
+G+A +LG G G Y+ N + V VK ++ L ++ F +E
Sbjct: 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI 66
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKG 481
+ + HP+I+ + + ++ E P G L L K L I K
Sbjct: 67 MKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN-----HVAQTM 536
+A S H ++ N+L++ LGDF V +
Sbjct: 126 MAY--------LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 537 FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
++SPE I ++ + SDV+ + + E+++ GK P +L N K I V+E
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLE 228
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 124
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 125 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 379 VLGNGGLGSSYKAAMA----NGLTVVVKRI--REMNQLGRDTFDAEMRRLGRIKHPNILA 432
+L G G+ K +A G V +K I ++N E+R + + HPNI+
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
++ EY G + L ++H + + + + + + + H +
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA------YISPEYIQ 546
+ H +LK+ N+LL D + DF F +N V + A Y +PE Q
Sbjct: 134 ----RIVHRDLKAENLLLDADMNIKIADFGF---SNEFTVGGKLDAFCGAPPYAAPELFQ 186
Query: 547 HQQL-SPKSDVYCLGILILEVITGKFP 572
++ P+ DV+ LG+++ +++G P
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 124
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 125 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 378 EVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +R+ + +D E R L +HP L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 72
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ + + + + L ++HS
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-----AEIVSALEYLHSR 127
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y ++K N++L +D + DF + F Y++PE ++
Sbjct: 128 DVVYR----DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 21/232 (9%)
Query: 367 FGLADLMKAAAEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQL-GRDTFDAEMRR 421
+G+A +LG G G Y+ N + V VK ++ L ++ F +E
Sbjct: 3 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI 62
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKG 481
+ + HP+I+ + + ++ E P G L L K L I K
Sbjct: 63 MKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN-----HVAQTM 536
+A S H ++ N+L++ LGDF V +
Sbjct: 122 MAY--------LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 537 FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
++SPE I ++ + SDV+ + + E+++ GK P +L N K I V+E
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLE 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 377 AEVLGNGGLGSSYKA-AMANG-----LTVVVKRIREMNQLG-RDTFDAEMRRLGRI-KHP 428
+ LG G G +A A G L V VK ++ ++ +E++ + + +H
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK----GISHAELNWPTRLNIIKG--- 481
NI+ L LV++EY G LL L + G S A P L+ G
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 482 -----------VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTN 528
VA G++F+ AS H ++ + NVLL+ +V +GDF A + +
Sbjct: 156 ELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 529 PNHV----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGID 584
N++ A+ +++PE I + +SDV+ GIL+ E+ + N GI
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL------NPYPGIL 265
Query: 585 VVELVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
V L+ D ++A+ A A +I ++Q AC EP R ++
Sbjct: 266 VNSKFYKLVKDGYQMAQ------PAFAPKNIYSIMQ------ACWALEPTHRPTFQQICS 313
Query: 645 MIEE 648
++E
Sbjct: 314 FLQE 317
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 379 VLGNGGLGSSYKA-AMANGLTVVVKRI--REMNQLGR-DTFDAEMRRLGRIKHPNILAPL 434
+LG G Y+A ++ GL V +K I + M + G E++ ++KHP+IL
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 435 AYHFRRDEKLVVSEYMPKGSL-LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
Y + +V E G + +L + K S E + + + G+ ++HS
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-----HFMHQIITGMLYLHS-- 130
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHP-LTNPNHVAQTMFA---YISPEYIQHQQ 549
+ + H +L SN+LL+++ + DF L P+ T+ YISPE
Sbjct: 131 --HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 550 LSPKSDVYCLGILILEVITGKFP 572
+SDV+ LG + ++ G+ P
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 380 LGNGGLGSSYKAAMA--------NGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHP 428
LG G G A +TV VK +++ + +D D +EM + I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLN 477
NI+ L + V+ Y KG+L L + G+ ++ ++ + ++
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM 536
+A G+ ++ AS + H +L + NVL++++ V + DF + N ++ +T
Sbjct: 162 CTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVS 590
+++PE + + + +SDV+ G+L+ E+ T G P GI V EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------GIPVEELF- 269
Query: 591 SLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + AN N + MM++ C + P++R ++ ++ ++ I
Sbjct: 270 KLLKEGHRMDK------PANCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 21/232 (9%)
Query: 367 FGLADLMKAAAEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQL-GRDTFDAEMRR 421
+G+A +LG G G Y+ N + V VK ++ L ++ F +E
Sbjct: 19 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI 78
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKG 481
+ + HP+I+ + + ++ E P G L L K L I K
Sbjct: 79 MKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN-----HVAQTM 536
+A S H ++ N+L++ LGDF V +
Sbjct: 138 MAY--------LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 537 FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
++SPE I ++ + SDV+ + + E+++ GK P +L N K I V+E
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLE 240
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVV-VKRIREMNQLGRD-TFDAEMRRLGRIKHPNILAPLA 435
+VLG G A +V +K I + G++ + + E+ L +IKHPNI+A L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA-LD 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ L + + G LF EKG + E + +RL I V + + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERD-ASRL--IFQVLDAVKYLHD---- 134
Query: 496 YELPHGNLKSSNVL---LSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+ H +LK N+L L +D ++ DF + +P V T Y++PE + +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 550 LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISA 609
S D + +G++ ++ G +P Y N +L ++ + +IS
Sbjct: 195 YSKAVDCWSIGVIAYILLCG-YPPFYDEND------AKLFEQILKAEYEFDSPYWDDISD 247
Query: 610 NAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+A++ I ++ E +P KR E+AL+
Sbjct: 248 SAKDFIRHLM----------EKDPEKRFTCEQALQ 272
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
LG G G +K + +GL + K I E+ R+ E++ L P I+
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
+ E + E+M GSL +L I L + V GL+++ + ++
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREK---HK 128
Query: 498 LPHGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQHQQLSPKS 554
+ H ++K SN+L++ L DF N T +Y+SPE +Q S +S
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR-SYMSPERLQGTHYSVQS 187
Query: 555 DVYCLGILILEVITGKFP 572
D++ +G+ ++E+ G++P
Sbjct: 188 DIWSMGLSLVEMAVGRYP 205
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L++ E M G L + G++ + E I++ + + F+HS + + H
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAA-----EIMRDIGTAIQFLHS----HNIAHR 133
Query: 502 NLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSDV 556
++K N+L + +D V L DF F T N + + Y++PE + ++ D+
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 193
Query: 557 YCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAE--LIDPEISANAENS 614
+ LG+++ ++ G FP Y + + +S + + R+ + +PE S +E++
Sbjct: 194 WSLGVIMYILLCG-FPPFYSNTGQA-------ISPGMKRRIRLGQYGFPNPEWSEVSEDA 245
Query: 615 IGMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK ++P +RL + +
Sbjct: 246 KQLIRLLLK-------TDPTERLTITQ 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 375 AAAEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP 433
+ E+LG G G +K A GL + K I+ ++ E+ + ++ H N++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
+++ ++V EY+ G L + E + EL+ + +K + G+ +H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELD---TILFMKQICEGIRHMHQMY 207
Query: 494 ASYELPHGNLKSSNVL-LSQDYVPL-LGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQ 548
+ H +LK N+L +++D + + DF P + F +++PE + +
Sbjct: 208 ----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+S +D++ +G++ +++G P
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 378 EVLGNGGLGSSYKAAMAN-GLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAP-- 433
E LG GG G + + G V +K+ R E++ R+ + E++ + ++ HPN+++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 434 ----LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
L D L+ EY G L L+ + + P R ++ +++ L ++
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIR-TLLSDISSALRYL 138
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTM---FAYISPE 543
H + H +LK N++L Q + + D + + + Y++PE
Sbjct: 139 HEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 194
Query: 544 YIQHQQLSPKSDVYCLGILILEVITGKFP 572
++ ++ + D + G L E ITG P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 378 EVLGNGGLGSSYKAAMAN-GLTVVVKRIR-EMNQLGRDTFDAEMRRLGRIKHPNILAP-- 433
E LG GG G + + G V +K+ R E++ R+ + E++ + ++ HPN+++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 434 ----LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
L D L+ EY G L L+ + + P R ++ +++ L ++
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIR-TLLSDISSALRYL 137
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTM---FAYISPE 543
H + H +LK N++L Q + + D + + + Y++PE
Sbjct: 138 HEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
Query: 544 YIQHQQLSPKSDVYCLGILILEVITGKFP 572
++ ++ + D + G L E ITG P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVV-VKRIREMNQLGRD-TFDAEMRRLGRIKHPNILAPLA 435
+VLG G A +V +K I + G++ + + E+ L +IKHPNI+A L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA-LD 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ L + + G LF EKG + E + +RL I V + + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERD-ASRL--IFQVLDAVKYLHD---- 134
Query: 496 YELPHGNLKSSNVL---LSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+ H +LK N+L L +D ++ DF + +P V T Y++PE + +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 550 LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISA 609
S D + +G++ ++ G +P Y N +L ++ + +IS
Sbjct: 195 YSKAVDCWSIGVIAYILLCG-YPPFYDEND------AKLFEQILKAEYEFDSPYWDDISD 247
Query: 610 NAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+A++ I ++ E +P KR E+AL+
Sbjct: 248 SAKDFIRHLM----------EKDPEKRFTCEQALQ 272
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+G G G K ++G +V K + M + + +E+ L +KHPNI+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 436 YHFRRDEK-----LVVSEYMPKGSLLFLLHGEKGISHAE-LNWPTRLNIIKGVANGLSFI 489
Y+ R ++ +V EY G L ++ KG + L+ L ++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 490 HSEF-ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEY 544
H + + H +LK +NV L LGDF + N + F Y+SPE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ 187
Query: 545 IQHQQLSPKSDVYCLGILILEV 566
+ + KSD++ LG L+ E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVV-VKRIREMNQLGRD-TFDAEMRRLGRIKHPNILAPLA 435
+VLG G A +V +K I + G++ + + E+ L +IKHPNI+A L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA-LD 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ L + + G LF EKG + E + +RL I V + + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERD-ASRL--IFQVLDAVKYLHD---- 134
Query: 496 YELPHGNLKSSNVL---LSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+ H +LK N+L L +D ++ DF + +P V T Y++PE + +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 550 LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISA 609
S D + +G++ ++ G +P Y N +L ++ + +IS
Sbjct: 195 YSKAVDCWSIGVIAYILLCG-YPPFYDEND------AKLFEQILKAEYEFDSPYWDDISD 247
Query: 610 NAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+A++ I ++ E +P KR E+AL+
Sbjct: 248 SAKDFIRHLM----------EKDPEKRFTCEQALQ 272
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVV-VKRIREMNQLGRD-TFDAEMRRLGRIKHPNILAPLA 435
+VLG G A +V +K I + G++ + + E+ L +IKHPNI+A L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA-LD 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ L + + G LF EKG + E + +RL I V + + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERD-ASRL--IFQVLDAVKYLHD---- 134
Query: 496 YELPHGNLKSSNVL---LSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+ H +LK N+L L +D ++ DF + +P V T Y++PE + +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 550 LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISA 609
S D + +G++ ++ G +P Y N +L ++ + +IS
Sbjct: 195 YSKAVDCWSIGVIAYILLCG-YPPFYDEND------AKLFEQILKAEYEFDSPYWDDISD 247
Query: 610 NAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK 644
+A++ I ++ E +P KR E+AL+
Sbjct: 248 SAKDFIRHLM----------EKDPEKRFTCEQALQ 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L++ E M G L + G++ + E I++ + + F+HS + + H
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAA-----EIMRDIGTAIQFLHS----HNIAHR 152
Query: 502 NLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSDV 556
++K N+L + +D V L DF F T N + + Y++PE + ++ D+
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 212
Query: 557 YCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAE--LIDPEISANAENS 614
+ LG+++ ++ G FP Y + + +S + + R+ + +PE S +E++
Sbjct: 213 WSLGVIMYILLCG-FPPFYSNTGQA-------ISPGMKRRIRLGQYGFPNPEWSEVSEDA 264
Query: 615 IGMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK ++P +RL + +
Sbjct: 265 KQLIRLLLK-------TDPTERLTITQ 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 445 VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLK 504
+V EY+P GSL L I A+L L + + G++++HS+ H NL
Sbjct: 95 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHSQ----HYIHRNLA 144
Query: 505 SSNVLLSQDYVPLLGDFAF-------HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVY 557
+ NVLL D + +GDF H + + +PE ++ + SDV+
Sbjct: 145 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 558 CLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQD--RVAELIDP-EISANAENS 614
G+ + E++T SQ +EL+ G R+ EL++ E +
Sbjct: 205 SFGVTLYELLTHCDSSQ-----SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 259
Query: 615 IGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEIHD 651
+ L+K C E+E + R E + +++ +H+
Sbjct: 260 PCEVYHLMK---NCWETEASFRPTFENLIPILKTVHE 293
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 20/222 (9%)
Query: 358 SMINDDKDPFGLADLMKAAAEVLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQLGRDT 414
+M +D++ G L+K +G G A + G V +K I ++N
Sbjct: 2 AMGSDEQPHIGNYRLLKT----IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK 57
Query: 415 FDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+R + + HPNI+ ++ EY G + L ++H +
Sbjct: 58 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKE 112
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ 534
+ + + + + + H + + H +LK+ N+LL D + DF F
Sbjct: 113 ARSKFRQIVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168
Query: 535 TMFA---YISPEYIQHQQL-SPKSDVYCLGILILEVITGKFP 572
T Y +PE Q ++ P+ DV+ LG+++ +++G P
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+G G G K ++G +V K + M + + +E+ L +KHPNI+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 436 YHFRRDEK-----LVVSEYMPKGSLLFLLHGEKGISHAE-LNWPTRLNIIKGVANGLSFI 489
Y+ R ++ +V EY G L ++ KG + L+ L ++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 490 HSEF-ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEY 544
H + + H +LK +NV L LGDF + N + F Y+SPE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 187
Query: 545 IQHQQLSPKSDVYCLGILILEV 566
+ + KSD++ LG L+ E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 145 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 252
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 253 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVK-RIREMNQL----GRDTFDAEMRRLGRIKHPNI 430
+VLG+G G+ YK + G TV + I+ +N+ F E + + HP++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGI--SHAELNWPTRLNIIKGVANGLSF 488
+ L +LV ++ MP G LL +H K S LNW + +A G+ +
Sbjct: 80 VRLLGVCLSPTIQLV-TQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 132
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV------AQTMFAYISP 542
+ L H +L + NVL+ + DF L + + +++
Sbjct: 133 LEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 543 EYIQHQQLSPKSDVYCLGILILEVIT 568
E I +++ + +SDV+ G+ I E++T
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 417 AEMRRLGRIKHPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTR 475
E R L +HP L L Y F+ ++L V EY G L F L E+ S +
Sbjct: 197 TENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF--- 252
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT 535
+ + L ++HSE + + +LK N++L +D + DF +
Sbjct: 253 --YGAEIVSALDYLHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307
Query: 536 MFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
F Y++PE ++ D + LG+++ E++ G+ P
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 263
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 264 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ + +L+ ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 141 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 248
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 249 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 417 AEMRRLGRIKHPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTR 475
E R L +HP L L Y F+ ++L V EY G L F L E+ S +
Sbjct: 200 TENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF--- 255
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT 535
+ + L ++HSE + + +LK N++L +D + DF +
Sbjct: 256 --YGAEIVSALDYLHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 310
Query: 536 MFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
F Y++PE ++ D + LG+++ E++ G+ P
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +++ + +D E R L +HP L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTA 72
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ S + + + L ++HSE
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG-----AEIVSALDYLHSE 127
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
+ + +LK N++L +D + DF + F Y++PE ++
Sbjct: 128 ---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 148 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 255
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 256 LLKEGHRM------DKPSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +++ + +D E R L +HP L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTA 73
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ S + + + L ++HSE
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG-----AEIVSALDYLHSE 128
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
+ + +LK N++L +D + DF + F Y++PE ++
Sbjct: 129 ---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFD---AEMRRLGRIKHPNILAP 433
++LG G G A G +K +++ + +D E R L +HP L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTA 74
Query: 434 LAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
L Y F+ ++L V EY G L F L E+ S + + + L ++HSE
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLHSE 129
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
+ + +LK N++L +D + DF + F Y++PE ++
Sbjct: 130 ---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
D + LG+++ E++ G+ P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+G G G K ++G +V K + M + + +E+ L +KHPNI+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 436 YHFRRDEK-----LVVSEYMPKGSLLFLLHGEKGISHAE-LNWPTRLNIIKGVANGLSFI 489
Y+ R ++ +V EY G L ++ KG + L+ L ++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 490 HSEF-ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEY 544
H + + H +LK +NV L LGDF + N + F Y+SPE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQ 187
Query: 545 IQHQQLSPKSDVYCLGILILEV 566
+ + KSD++ LG L+ E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 149 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 256
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 257 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 377 AEVLGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLG-RDTFDAEMRRLGRI-KH 427
+ LG G G +A A GL TV VK ++ L R+ +E++ L + H
Sbjct: 28 GKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL----------- 476
NI+ L LV++EY G LL L ++ P +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 477 --NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV 532
+ VA G++F+ AS H +L + N+LL+ + + DF A + N+V
Sbjct: 147 LLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 533 ----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
A+ +++PE I + + +SDV+ GI + E+ + G P G+ V
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 255
Query: 588 LVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
+I + R ++ PE A AE M ++K C +++P KR ++ +++IE
Sbjct: 256 KFYKMIKEGFR---MLSPE-HAPAE-----MYDIMK---TCWDADPLKRPTFKQIVQLIE 303
Query: 648 E 648
+
Sbjct: 304 K 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 197 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 304
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 305 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ + +L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 263
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 264 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 377 AEVLGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLG-RDTFDAEMRRLGRI-KH 427
+ LG G G +A A GL TV VK ++ L R+ +E++ L + H
Sbjct: 44 GKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL----------- 476
NI+ L LV++EY G LL L ++ P +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 477 --NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV 532
+ VA G++F+ AS H +L + N+LL+ + + DF A + N+V
Sbjct: 163 LLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 533 ----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
A+ +++PE I + + +SDV+ GI + E+ + G P G+ V
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 271
Query: 588 LVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
+I + R ++ PE A AE M ++K C +++P KR ++ +++IE
Sbjct: 272 KFYKMIKEGFR---MLSPE-HAPAE-----MYDIMK---TCWDADPLKRPTFKQIVQLIE 319
Query: 648 E 648
+
Sbjct: 320 K 320
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVK-RIREMNQL----GRDTFDAEMRRLGRIKHPNI 430
+VLG+G G+ YK + G TV + I+ +N+ F E + + HP++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKG--ISHAELNWPTRLNIIKGVANGLSF 488
+ L +LV ++ MP G LL +H K S LNW + +A G+ +
Sbjct: 103 VRLLGVCLSPTIQLV-TQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 155
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV------AQTMFAYISP 542
+ L H +L + NVL+ + DF L + + +++
Sbjct: 156 LEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 543 EYIQHQQLSPKSDVYCLGILILEVIT 568
E I +++ + +SDV+ G+ I E++T
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 377 AEVLGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLG-RDTFDAEMRRLGRI-KH 427
+ LG G G +A A GL TV VK ++ L R+ +E++ L + H
Sbjct: 51 GKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL----------- 476
NI+ L LV++EY G LL L ++ P +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 477 --NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV 532
+ VA G++F+ AS H +L + N+LL+ + + DF A + N+V
Sbjct: 170 LLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 533 ----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
A+ +++PE I + + +SDV+ GI + E+ + G P G+ V
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 278
Query: 588 LVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
+I + R ++ PE A AE M ++K C +++P KR ++ +++IE
Sbjct: 279 KFYKMIKEGFR---MLSPE-HAPAE-----MYDIMK---TCWDADPLKRPTFKQIVQLIE 326
Query: 648 E 648
+
Sbjct: 327 K 327
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 53/301 (17%)
Query: 377 AEVLGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLG-RDTFDAEMRRLGRI-KH 427
+ LG G G +A A GL TV VK ++ L R+ +E++ L + H
Sbjct: 46 GKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL----------- 476
NI+ L LV++EY G LL L ++ P +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 477 --NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV 532
+ VA G++F+ AS H +L + N+LL+ + + DF A + N+V
Sbjct: 165 LLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 533 ----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVE 587
A+ +++PE I + + +SDV+ GI + E+ + G P G+ V
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 273
Query: 588 LVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIE 647
+I + R ++ PE A AE M ++K C +++P KR ++ +++IE
Sbjct: 274 KFYKMIKEGFR---MLSPE-HAPAE-----MYDIMK---TCWDADPLKRPTFKQIVQLIE 321
Query: 648 E 648
+
Sbjct: 322 K 322
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GISHA---------ELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ ++ +L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTM- 536
VA G+ ++ AS + H +L + NVL+++D V + DF + + ++ +T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 537 ----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
+++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF-K 263
Query: 592 LIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 264 LLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP-------NHVA 533
+ + L ++H + + H +LK N+LL++D + DF + +P N
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITG 569
T Y+SPE + + S SD++ LG +I +++ G
Sbjct: 196 GTA-QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 445 VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLK 504
+V EY+P GSL L I A+L L + + G++++H++ H NL
Sbjct: 95 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHAQ----HYIHRNLA 144
Query: 505 SSNVLLSQDYVPLLGDFAF-------HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVY 557
+ NVLL D + +GDF H + + +PE ++ + SDV+
Sbjct: 145 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 558 CLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQD--RVAELIDP-EISANAENS 614
G+ + E++T SQ +EL+ G R+ EL++ E +
Sbjct: 205 SFGVTLYELLTHCDSSQ-----SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 259
Query: 615 IGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEIHD 651
+ L+K C E+E + R E + +++ +H+
Sbjct: 260 PCEVYHLMK---NCWETEASFRPTFENLIPILKTVHE 293
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 378 EVLGNGGLGSSYKAA--------MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPN 429
E LG G +K + V++K + + ++ ++F + ++ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ F DE ++V E++ GSL L K +N +L + K +A + F+
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAKQLAWAMHFL 129
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTN--------PNHVAQTMFAYIS 541
L HGN+ + N+LL ++ G+ F L++ P + Q ++
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 542 PEYIQH-QQLSPKSDVYCLGILILEVITG 569
PE I++ + L+ +D + G + E+ +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ +S + H +L + N+LLS++ V + DF A NP++V +
Sbjct: 208 VARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + S KSDV+ G+L+ E+ +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 38/225 (16%)
Query: 377 AEVLGNGGLGSSYKAAMANGLT-------VVVKRIRE-MNQLGRDTFDAEMRRLGRI-KH 427
+VLG+G G A A G++ V VK ++E + R+ +E++ + ++ H
Sbjct: 50 GKVLGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLL-FLLHGEKGISHAELNWPTR--------LNI 478
NI+ L ++ EY G LL +L + S E+ + + LN+
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 479 IK---------GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLT 527
+ VA G+ F+ EF S H +L + NVL++ V + DF A ++
Sbjct: 169 LTFEDLLCFAYQVAKGMEFL--EFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 528 NPNHV----AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+ N+V A+ +++PE + + KSDV+ GIL+ E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 379 VLGNGGLGSSYKAAMAN-GLTVVVKRIREMN--QLGRDTFDAEMRRLGRIKHPNILAPLA 435
++G G G K + G V +K+ E + ++ + E++ L +++H N++ L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
++ +V E++ L L G L++ + + NG+ F HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHS---- 142
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA---YISPE-YIQHQQL 550
+ + H ++K N+L+SQ V L DF F L P V A Y +PE + +
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 551 SPKSDVYCLGILILEVITGK--FP 572
DV+ +G L+ E+ G+ FP
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFP 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 377 AEVLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRDTFDAEMRR---LGRIKHPNILA 432
++LG G ++ A +A +K + + + + + R + R+ HP
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP-FFV 93
Query: 433 PLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L + F+ DEKL Y G LL + + T + + L ++H
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----AEIVSALEYLHG 148
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA----YISPEYI 545
+ + H +LK N+LL++D + DF + +P F Y+SPE +
Sbjct: 149 K----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 546 QHQQLSPKSDVYCLGILILEVITG 569
+ SD++ LG +I +++ G
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 24/221 (10%)
Query: 379 VLGNGGLGSSY---KAAMANGLTVVVKRIREMNQLGRDTFD-----AEMRRLGRIKHPNI 430
VLG GG G + K AN + ++ + + R+ D AE L +KHP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 431 LAPLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
+ L Y F+ KL ++ EY+ G L L E GI + T + ++ L +
Sbjct: 84 V-DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMED----TACFYLAEISMALGHL 137
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLT----NPNHVAQTMFAYISPEYI 545
H + Y +LK N++L+ L DF + H Y++PE +
Sbjct: 138 HQKGIIYR----DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 546 QHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVV 586
+ D + LG L+ +++TG P N K ID +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGA-PPFTGENRKKTIDKI 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 379 VLGNGGLGSSY---KAAMANGLTVVVKRIREMNQLGRDTFD-----AEMRRLGRIKHPNI 430
VLG GG G + K AN + ++ + + R+ D AE L +KHP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 431 LAPLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
+ L Y F+ KL ++ EY+ G L L E GI + T + ++ L +
Sbjct: 84 V-DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMED----TACFYLAEISMALGHL 137
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDF-----AFHPLTNPNHVAQTMFAYISPEY 544
H + Y +LK N++L+ L DF + H T + T+ Y++PE
Sbjct: 138 HQKGIIYR----DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI-EYMAPEI 192
Query: 545 IQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVV 586
+ + D + LG L+ +++TG P N K ID +
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGA-PPFTGENRKKTIDKI 233
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 158
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + + YI+PE + + S
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPP 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 134
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + + YI+PE + + S
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPP 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAEMRR----LGRIKHPNILA 432
+V+G G G A A + VK +++ L + M L +KHP L
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP-FLV 102
Query: 433 PLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L + F+ +KL V +Y+ G L + L E+ P +A+ L ++HS
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-----PRARFYAAEIASALGYLHS 157
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQH 547
Y +LK N+LL +L DF ++ + F Y++PE +
Sbjct: 158 LNIVYR----DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 548 QQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGID 584
Q D +CLG ++ E++ G P Y N D
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYG-LPPFYSRNTAEMYD 249
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 84 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 137
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-- 538
+ + L ++H + + H +LK N+LL++D + DF + +P A
Sbjct: 138 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 160
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + + YI+PE + + S
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPP 240
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 85 IDVEALRQIAGLTSIALQNNFFTGAI--PEFNKLGALNALYLSSNNFSEEIPDDFFAPMT 142
ID A +A L + L +N ++ F+ LG L+ L+L E P F +
Sbjct: 70 IDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG-LFRGLA 128
Query: 143 PLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPE 184
LQ L+L +N D+ +L NLT L LHGN S +PE
Sbjct: 129 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPE 169
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 69 GVVSSLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIPE-FNKLGALNALYLSSN 127
G ++ LFL +S ++ A R + L + L N P F LG L LYL +N
Sbjct: 152 GNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 210
Query: 128 NFSEEIPDDFFAPMTPLQKLWLDNNKFT 155
N S +P + AP+ LQ L L++N +
Sbjct: 211 NLS-ALPTEALAPLRALQYLRLNDNPWV 237
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 85 IDVEALRQIAGLTSIALQNNFFTGAI--PEFNKLGALNALYLSSNNFSEEIPDDFFAPMT 142
ID A +A L + L +N ++ F+ LG L+ L+L E P F +
Sbjct: 71 IDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG-LFRGLA 129
Query: 143 PLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPE 184
LQ L+L +N D+ +L NLT L LHGN S +PE
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPE 170
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 69 GVVSSLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIPE-FNKLGALNALYLSSN 127
G ++ LFL +S ++ A R + L + L N P F LG L LYL +N
Sbjct: 153 GNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 128 NFSEEIPDDFFAPMTPLQKLWLDNNKFT 155
N S +P + AP+ LQ L L++N +
Sbjct: 212 NLS-ALPTEALAPLRALQYLRLNDNPWV 238
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 380 LGNGGLGSSYKAAM-------ANGLTVVVKRIREMNQLGRDTFD--AEMRRLGRI-KHPN 429
LG G G A N +T V ++ + + +D D +EM + I KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEK--GI------SH---AELNWPTRLNI 478
I+ L + V+ EY KG+L L + G+ SH +L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV------ 532
VA G+ ++ AS + H +L + NVL+++D V + DF + +H+
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDXXKKT 209
Query: 533 --AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELV 589
+ +++PE + + + +SDV+ G+L+ E+ T G P G+ V EL
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVPVEELF 262
Query: 590 SSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEI 649
L+ + R+ + +N N + MM++ C + P++R ++ ++ ++ I
Sbjct: 263 -KLLKEGHRMDK------PSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 136
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + YI+PE + + S
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 136
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + YI+PE + + S
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 84 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 137
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 138 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 91 MSRLDHP-FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 144
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 145 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 68 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 121
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 122 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 445 VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLK 504
+V EY+P GSL L I A+L L + + G++++H++ H +L
Sbjct: 112 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHAQ----HYIHRDLA 161
Query: 505 SSNVLLSQDYVPLLGDFAF-------HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVY 557
+ NVLL D + +GDF H + + +PE ++ + SDV+
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 558 CLGILILEVITGKFPSQ--------YLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISA 609
G+ + E++T SQ + A+G + V+ L L +R L P+
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL----ERGERLPRPD-KC 276
Query: 610 NAENSIGMMVQLLKIGLACTESEPAKRLDLEEALKMIEEIHD 651
AE + L+K C E+E + R E + +++ +H+
Sbjct: 277 PAE-----VYHLMK---NCWETEASFRPTFENLIPILKTVHE 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQ-LGRDTFDAEMRRLGRIKHPNILAPL 434
VLG G G G VK I R++ Q +++ E++ L ++ HPNI+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK-- 90
Query: 435 AYHFRRDEK--LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F D+ +V E G L ++ IS + II+ V +G++++H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 493 FASYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQ 546
++ H +LK N+LL S+D + DF + + YI+PE +
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 200
Query: 547 HQQLSPKSDVYCLGILILEVITG 569
H K DV+ G+++ +++G
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 84 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 137
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 138 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEK---LVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ L + HPNI+ Y F D++ LV+ Y KG LF ++ I + N
Sbjct: 86 EVAVLKLLDHPNIMK--LYDFFEDKRNYYLVMECY--KGGELF----DEIIHRMKFNEVD 137
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPL-TNPN 530
IIK V +G++++H + + H +LK N+LL +D + + DF + N
Sbjct: 138 AAVIIKQVLSGVTYLHK----HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 531 HVAQTMFA--YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+ + + YI+PE ++ ++ K DV+ +G+++ ++ G P
Sbjct: 194 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 62 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 115
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 116 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 87 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 140
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 141 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 61 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 114
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 115 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 86 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 139
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 140 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 87 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 140
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP-------NHVA 533
+ + L ++H + + H +LK N+LL++D + DF + +P N
Sbjct: 141 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITG 569
T Y+SPE + + SD++ LG +I +++ G
Sbjct: 197 GTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMRRLGRIKHPNILAPLA 435
LG GG ++ + A+ V +I + L R+ E+ + H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ D VV E + SLL L K ++ E + ++ + G ++H
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-----YLRQIVLGCQYLHRN--- 140
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQLS 551
+ H +LK N+ L++D +GDF + + YI+PE + + S
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 552 PKSDVYCLGILILEVITGKFP 572
+ DV+ +G ++ ++ GK P
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPP 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 63 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 116
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 117 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 89 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 142
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 143 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 83 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 136
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP-------NHVA 533
+ + L ++H + + H +LK N+LL++D + DF + +P N
Sbjct: 137 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITG 569
T Y+SPE + + SD++ LG +I +++ G
Sbjct: 193 GTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 83 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 136
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 137 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 18/203 (8%)
Query: 379 VLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRD----TFDAEMRRLGRIKHPNILAPL 434
VLG G G A + +I + + + +D E R L + P L L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 435 AYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
F+ ++L V EY+ G L++ + + P + ++ GL F+H
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQ-----QVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQQ 549
Y +LK NV+L + + DF + V F YI+PE I +Q
Sbjct: 141 IIYR----DLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 550 LSPKSDVYCLGILILEVITGKFP 572
D + G+L+ E++ G+ P
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVS-EYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ R+ HP L + F+ DEKL Y G LL + + T
Sbjct: 64 MSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT-----A 117
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNP--NHVAQTMFA 538
+ + L ++H + + H +LK N+LL++D + DF + +P F
Sbjct: 118 EIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 539 ----YISPEYIQHQQLSPKSDVYCLGILILEVITG 569
Y+SPE + + SD++ LG +I +++ G
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQ-LGRDTFDAEMRRLGRIKHPNILAPL 434
VLG G G G VK I R++ Q +++ E++ L ++ HPNI+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK-- 113
Query: 435 AYHFRRDEK--LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F D+ +V E G L ++ IS + II+ V +G++++H
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 493 FASYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQ 546
++ H +LK N+LL S+D + DF + + YI+PE +
Sbjct: 169 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 223
Query: 547 HQQLSPKSDVYCLGILILEVITG 569
H K DV+ G+++ +++G
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 200 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
HP+I+ + + +V + M KG L L + +S E TR +I++ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKE----TR-SIMRSLLEAV 213
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF---AYISPE 543
SF+H+ + H +LK N+LL + L DF F P + + Y++PE
Sbjct: 214 SFLHAN----NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 544 YIQ------HQQLSPKSDVYCLGILILEVITGKFP---------------SQYLSNAKGG 582
++ H + D++ G+++ ++ G P QY ++
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 329
Query: 583 IDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
D V LI R+ + +DPE AE ++
Sbjct: 330 DDRSSTVKDLIS---RLLQ-VDPEARLTAEQAL 358
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQ-LGRDTFDAEMRRLGRIKHPNILAPL 434
VLG G G G VK I R++ Q +++ E++ L ++ HPNI+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK-- 114
Query: 435 AYHFRRDEK--LVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F D+ +V E G L ++ IS + II+ V +G++++H
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 493 FASYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQ 546
++ H +LK N+LL S+D + DF + + YI+PE +
Sbjct: 170 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 224
Query: 547 HQQLSPKSDVYCLGILILEVITG 569
H K DV+ G+++ +++G
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSG 247
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 207 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 209 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 366 PFGLADLMK--AAAEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMR 420
P G + M+ E +G G G YKA G V +K+IR + T E+
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + HPNI+ L ++ +V E++ + F+ + + P + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLF 117
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQT 535
+ GL+F HS + + H +LK N+L++ + L DF P+ H T
Sbjct: 118 QLLQGLAFCHS----HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 536 MFAYISPE-YIQHQQLSPKSDVYCLGILILEVITGK--FP 572
++ Y +PE + + S D++ LG + E++T + FP
Sbjct: 174 LW-YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 417 AEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTR 475
E R L P L L F+ ++L V EY+ G L++ + P
Sbjct: 69 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFKEPHA 123
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT 535
+ +A GL F+ S+ Y +LK NV+L + + DF + V
Sbjct: 124 VFYAAEIAIGLFFLQSKGIIYR----DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179
Query: 536 MFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
F YI+PE I +Q D + G+L+ E++ G+ P + G D EL S
Sbjct: 180 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE-------GEDEDELFQS 232
Query: 592 LI 593
++
Sbjct: 233 IM 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 202 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQ-LGRDTFDAEMRRLGRIKHPNILAPL 434
VLG G G G VK I R++ Q +++ E++ L ++ HPNI+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 435 AYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
+ + +V E G L ++ IS + II+ V +G++++H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 151
Query: 495 SYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQ 548
++ H +LK N+LL S+D + DF + + YI+PE + H
Sbjct: 152 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE-VLHG 208
Query: 549 QLSPKSDVYCLGILILEVITG 569
K DV+ G+++ +++G
Sbjct: 209 TYDEKCDVWSTGVILYILLSG 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMR 420
DP + M+ LG GG Y+ + V ++ + L ++ E+
Sbjct: 37 DPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ +P+++ + D VV E + SLL L K ++ E + R I
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-- 152
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-- 538
G+ ++H+ + H +LK N+ L+ D +GDF + +
Sbjct: 153 ---QGVQYLHNN----RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGT 205
Query: 539 --YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
YI+PE + + S + D++ LG ++ ++ GK P
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 366 PFGLADLMK--AAAEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMR 420
P G + M+ E +G G G YKA G V +K+IR + T E+
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
L + HPNI+ L ++ +V E++ + F+ + + P + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLF 117
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQT 535
+ GL+F HS + + H +LK N+L++ + L DF P+ H T
Sbjct: 118 QLLQGLAFCHS----HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 536 MFAYISPE-YIQHQQLSPKSDVYCLGILILEVITGK--FP 572
++ Y +PE + + S D++ LG + E++T + FP
Sbjct: 174 LW-YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 417 AEMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTR 475
E R L P L L F+ ++L V EY+ G L++ + P
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFKEPHA 444
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQT 535
+ +A GL F+ S+ Y +LK NV+L + + DF + V
Sbjct: 445 VFYAAEIAIGLFFLQSKGIIYR----DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500
Query: 536 MFA----YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSS 591
F YI+PE I +Q D + G+L+ E++ G+ P + G D EL S
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE-------GEDEDELFQS 553
Query: 592 LI 593
++
Sbjct: 554 IM 555
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMR 420
DP + M+ LG GG Y+ + V ++ + L ++ E+
Sbjct: 37 DPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ +P+++ + D VV E + SLL L K ++ E + R I
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-- 152
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-- 538
G+ ++H+ + H +LK N+ L+ D +GDF + +
Sbjct: 153 ---QGVQYLHNN----RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGT 205
Query: 539 --YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
YI+PE + + S + D++ LG ++ ++ GK P
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GLSF HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLSFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLN 477
E R GR++ P+++ P+ D +L V + G L +G L P +
Sbjct: 84 EARTAGRLQEPHVV-PIHDFGEIDGQLYVDXRLINGVDLAAXLRRQG----PLAPPRAVA 138
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQ--- 534
I++ + + L H+ A+ H ++K N+L+S D L DF T + Q
Sbjct: 139 IVRQIGSALDAAHAAGAT----HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN 194
Query: 535 ---TMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQ 574
T++ Y +PE + ++D+Y L ++ E +TG P Q
Sbjct: 195 TVGTLY-YXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 378 EVLGNGGLGSSYKAA--------MANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPN 429
E LG G +K + V++K + + ++ ++F + ++ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 430 ILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
++ DE ++V E++ GSL L K +N +L + K +A + F+
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAKQLAAAMHFL 129
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTN--------PNHVAQTMFAYIS 541
L HGN+ + N+LL ++ G+ F L++ P + Q ++
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 542 PEYIQH-QQLSPKSDVYCLGILILEVITG 569
PE I++ + L+ +D + G + E+ +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 159 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 194 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 29/212 (13%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYH 437
EV G G +KA + N V + Q ++ + E+ L +KH NIL +
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 438 FRRD----EKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
R + +++ + KGSL L ++W +I + +A GL+++H +
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV------VSWNELCHIAETMARGLAYLHEDI 141
Query: 494 ASYE------LPHGNLKSSNVLLSQDYVPLLGDFAFH------PLTNPNHVAQTMFAYIS 541
+ + H ++KS NVLL + + DF H Y++
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 542 PEYIQ-----HQQLSPKSDVYCLGILILEVIT 568
PE ++ + + D+Y +G+++ E+ +
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 57/249 (22%)
Query: 378 EVLGNGGLGSSYKAAM------ANGLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNI 430
E LG G YK + V +K +++ + R+ F E R++HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLL-----HGEKGIS------HAELNWPTRLNII 479
+ L + ++ Y G L L H + G + + L P ++++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 480 KGVANGLSFIHSEFASYELPHGNLKSSNVLL------------------SQDYVPLLGDF 521
+A G+ ++ +S+ + H +L + NVL+ + DY LLG+
Sbjct: 152 AQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN- 206
Query: 522 AFHPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+ P+ +++PE I + + S SD++ G+++ EV + G P SN
Sbjct: 207 SLLPIR-----------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ- 254
Query: 581 GGIDVVELV 589
DVVE++
Sbjct: 255 ---DVVEMI 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 153 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGR-DTFDAEMRRLGRIKHPNILAPLA 435
E LGNG + YK G+ V +K ++ ++ G T E+ + +KH NI+
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK----GVANGLSFIHS 491
++ +V E+M ++ G + L LN++K + GL+F H
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL----ELNLVKYFQWQLLQGLAFCHE 126
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDF----AFHPLTNPNHVAQTMFAYISPEYIQ- 546
++ H +LK N+L+++ LGDF AF N Y +P+ +
Sbjct: 127 N----KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 547 HQQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ G ++ E+ITGK FP
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR-EMNQLG-RDTFDAEMRRLGRIKHPNILAPLA 435
E +G G G YKA G T +K+IR E G T E+ L +KH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ ++V E++ + L E G+ T + + + NG+++ H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR--- 119
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPEYIQ-HQQ 549
+ H +LK N+L++++ + DF P+ H T++ Y +P+ + ++
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-YRAPDVLMGSKK 177
Query: 550 LSPKSDVYCLGILILEVITG 569
S D++ +G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR-EMNQLG-RDTFDAEMRRLGRIKHPNILAPLA 435
E +G G G YKA G T +K+IR E G T E+ L +KH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ ++V E++ + L E G+ T + + + NG+++ H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR--- 119
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPEYIQ-HQQ 549
+ H +LK N+L++++ + DF P+ H T++ Y +P+ + ++
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-YRAPDVLMGSKK 177
Query: 550 LSPKSDVYCLGILILEVITGK--FP 572
S D++ +G + E++ G FP
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFP 202
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 57/249 (22%)
Query: 378 EVLGNGGLGSSYKAAM------ANGLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNI 430
E LG G YK + V +K +++ + R+ F E R++HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLL-----HGEKGIS------HAELNWPTRLNII 479
+ L + ++ Y G L L H + G + + L P ++++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 480 KGVANGLSFIHSEFASYELPHGNLKSSNVLL------------------SQDYVPLLGDF 521
+A G+ ++ +S+ + H +L + NVL+ + DY LLG+
Sbjct: 135 AQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN- 189
Query: 522 AFHPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+ P+ +++PE I + + S SD++ G+++ EV + G P SN
Sbjct: 190 SLLPIR-----------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ- 237
Query: 581 GGIDVVELV 589
DVVE++
Sbjct: 238 ---DVVEMI 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMR 420
DP + M+ LG GG Y+ + V ++ + L ++ E+
Sbjct: 21 DPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 78
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ +P+++ + D VV E + SLL L K ++ E + R I
Sbjct: 79 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-- 136
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-- 538
G+ ++H+ + H +LK N+ L+ D +GDF + +
Sbjct: 137 ---QGVQYLHNN----RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 189
Query: 539 --YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
YI+PE + + S + D++ LG ++ ++ GK P
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 395 NGLTVVVKRIR-EMNQLGRDTF-DAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPK 452
G V V+RI E TF E+ HPNI+ A +E VV+ +M
Sbjct: 51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110
Query: 453 GSL--LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLL 510
GS L H G++ + + I++GV L +IH H ++K+S++L+
Sbjct: 111 GSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH----MGYVHRSVKASHILI 161
Query: 511 SQDYVPLLGDFAFHPLTNPNH------------VAQTMFAYISPEYIQH--QQLSPKSDV 556
S D L + L+ +H + + ++SPE +Q Q KSD+
Sbjct: 162 SVDGKVYLSGLRSN-LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 220
Query: 557 YCLGILILEVITGKFP 572
Y +GI E+ G P
Sbjct: 221 YSVGITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 395 NGLTVVVKRIR-EMNQLGRDTF-DAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPK 452
G V V+RI E TF E+ HPNI+ A +E VV+ +M
Sbjct: 35 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 94
Query: 453 GSL--LFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLL 510
GS L H G++ + + I++GV L +IH H ++K+S++L+
Sbjct: 95 GSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH----MGYVHRSVKASHILI 145
Query: 511 SQDYVPLLGDFAFHPLTNPNH------------VAQTMFAYISPEYIQH--QQLSPKSDV 556
S D L + L+ +H + + ++SPE +Q Q KSD+
Sbjct: 146 SVDGKVYLSGLRSN-LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 204
Query: 557 YCLGILILEVITGKFP 572
Y +GI E+ G P
Sbjct: 205 YSVGITACELANGHVP 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P++V A+
Sbjct: 153 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 42/222 (18%)
Query: 379 VLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHP--------- 428
VLG G G KA A + +K+IR + T +E+ L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 429 ----NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
N + P+ ++ + EY G+L L+H E + W + + +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----------------PLT 527
LS+IHS+ + H +LK N+ + + +GDF P +
Sbjct: 128 ALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 528 NPNHVAQTMFA-YISPEYIQHQ-QLSPKSDVYCLGILILEVI 567
+ N + A Y++ E + + K D+Y LGI+ E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGX 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 365 DPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQL----GRDTFDAEMR 420
DP + M+ LG GG Y+ + V ++ + L ++ E+
Sbjct: 37 DPRTMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 421 RLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
+ +P+++ + D VV E + SLL L K ++ E + R I
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-- 152
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-- 538
G+ ++H+ + H +LK N+ L+ D +GDF + +
Sbjct: 153 ---QGVQYLHNN----RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 205
Query: 539 --YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
YI+PE + + S + D++ LG ++ ++ GK P
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDT-FDAEMRRLGRIKHPNILAPLA 435
E LG G A A G VK I + G+++ + E+ L +IKH NI+A L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA-LE 86
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ L + + G LF EKG + E + T +I+ V + + ++H
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRIVEKGF-YTEKDAST---LIRQVLDAVYYLHR---- 138
Query: 496 YELPHGNLKSSNVLL-SQDYVP--LLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+ H +LK N+L SQD ++ DF + V T Y++PE + +
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 550 LSPKSDVYCLGILILEVITGKFPSQYLSN 578
S D + +G++ ++ G +P Y N
Sbjct: 199 YSKAVDCWSIGVIAYILLCG-YPPFYDEN 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIR-EMNQLG-RDTFDAEMRRLGRIKHPNILAPLA 435
E +G G G YKA G T +K+IR E G T E+ L +KH NI+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFAS 495
+ ++V E++ + L E G+ T + + + NG+++ H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCHDR--- 119
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPEYIQ-HQQ 549
+ H +LK N+L++++ + DF P+ H T++ Y +P+ + ++
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW-YRAPDVLMGSKK 177
Query: 550 LSPKSDVYCLGILILEVITGK--FP 572
S D++ +G + E++ G FP
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFP 202
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTP 143
D+ AL+++ LT + L N ++P F+KL L L L N + +PD F +T
Sbjct: 77 DISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTN 134
Query: 144 LQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETI--QPTSIVSLDFSNNNL 201
L L+L +N+ L NLT L L N L PE + + T + L ++N L
Sbjct: 135 LTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSL-PEGVFDKLTQLKQLSLNDNQL 193
Query: 202 EGEIPKGL 209
+ +P G+
Sbjct: 194 KS-VPDGV 200
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 92 QIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWL 149
++ LT + L NN ++PE F+KL L L L+ N + +PD F +T L +WL
Sbjct: 155 KLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQL-KSVPDGVFDRLTSLTHIWL 212
Query: 150 DNNKFTGKIPDSL 162
NN + D L
Sbjct: 213 LNNPWDCACSDIL 225
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 92 QIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWL 149
++ LT + L +N ++P+ F+KL L L L +N + +P+ F +T L++L L
Sbjct: 131 KLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQL-QSLPEGVFDKLTQLKQLSL 188
Query: 150 DNNKFTGKIPDSLMN-LQNLTELHLHGNGF 178
++N+ +PD + + L +LT + L N +
Sbjct: 189 NDNQLKS-VPDGVFDRLTSLTHIWLLNNPW 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 26/204 (12%)
Query: 379 VLGNGGLGSSYKAA-MANGLTVVVKRI--REMNQ-LGRDTFDAEMRRLGRIKHPNILAPL 434
VLG G G G VK I R++ Q +++ E++ L ++ HPNI
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK-- 90
Query: 435 AYHFRRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F D+ +V E G L ++ IS + II+ V +G+++ H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 493 FASYELPHGNLKSSNVLL---SQDYVPLLGDFA----FHPLTNPNHVAQTMFAYISPEYI 545
++ H +LK N+LL S+D + DF F T + YI+PE +
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY-YIAPEVL 200
Query: 546 QHQQLSPKSDVYCLGILILEVITG 569
H K DV+ G+++ +++G
Sbjct: 201 -HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 33/237 (13%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
+V+GNG G ++A + V +K++ + + + E++ + +KHPN++ A+
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK----NRELQIMRIVKHPNVVDLKAF 100
Query: 437 HF----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK----GVANGL 486
+ ++DE +V EY+P+ H +A+L + +IK + L
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRH------YAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDY-VPLLGDFAFHPLT---NPNHVAQTMFAYISP 542
++IH S + H ++K N+LL V L DF + PN Y +P
Sbjct: 155 AYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
Query: 543 EYI-QHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDR 598
E I + D++ G ++ E++ G Q L + GID + + ++G R
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQG----QPLFPGESGIDQLVEIIKVLGTPSR 263
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 394 ANGLTVVVKRIREMN--QLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLV--VSEY 449
G V VK ++E QL R + E+ L + H +I+ + EK V V EY
Sbjct: 36 GTGEMVAVKALKEGCGPQL-RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 450 MPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVL 509
+P GSL L + A+L L + + G++++H++ H L + NVL
Sbjct: 95 VPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLHAQ----HYIHRALAARNVL 144
Query: 510 LSQDYVPLLGDFAF-------HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGIL 562
L D + +GDF H + + +PE ++ + SDV+ G+
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 563 ILEVIT 568
+ E++T
Sbjct: 205 LYELLT 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 123 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 179
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEFLHQDLKTFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 394 ANGLTVVVKRIREMN--QLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLV--VSEY 449
G V VK ++E QL R + E+ L + H +I+ + EK V V EY
Sbjct: 35 GTGEMVAVKALKEGCGPQL-RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 450 MPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVL 509
+P GSL L + A+L L + + G++++H++ H L + NVL
Sbjct: 94 VPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLHAQ----HYIHRALAARNVL 143
Query: 510 LSQDYVPLLGDFAF-------HPLTNPNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGIL 562
L D + +GDF H + + +PE ++ + SDV+ G+
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 563 ILEVIT 568
+ E++T
Sbjct: 204 LYELLT 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 92 QIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWL 149
++ LT ++L N ++P+ F+KL L LYL N + +P+ F +T L++L L
Sbjct: 50 KLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKL-QSLPNGVFDKLTQLKELAL 107
Query: 150 DNNKFTGKIPDSLMN-LQNLTELHLHGN 176
D N+ +PD + + L +L ++ LH N
Sbjct: 108 DTNQLK-SVPDGIFDRLTSLQKIWLHTN 134
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
F+KL L L L +N + +PD F +T LQK+WL N + P
Sbjct: 96 FDKLTQLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTEL 171
F+KL L L LS N + +PD F +T L L+L NK +P+ + + L L EL
Sbjct: 48 FDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKEL 105
Query: 172 HLHGNGFSGLIPETI 186
L N +P+ I
Sbjct: 106 ALDTNQLKS-VPDGI 119
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 72 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 125
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 126 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 182
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFP 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 148 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 426 KHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
+HPNI+ + +V+E M G LL + +K S E ++ ++ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDY----VPLLGDFAFHP--------LTNPNHVA 533
+ ++HS+ + H +LK SN+L + + DF F L P + A
Sbjct: 134 VEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLI 593
+++PE ++ Q D++ LGIL+ ++ G Y A G D E + + I
Sbjct: 190 N----FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTRI 240
Query: 594 G 594
G
Sbjct: 241 G 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 142 TPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETI--QPTSIVSLDFSNN 199
T Q+LWL+NN+ T P +L NL +L+ + N + IP + + T + LD ++N
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDN 91
Query: 200 NLEGEIPKG 208
+L+ IP+G
Sbjct: 92 HLK-SIPRG 99
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 123 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 94 AGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDN 151
A + LQ+N + ++P F++L L LYL+ N + +P F + L+ LW+ +
Sbjct: 37 ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTD 94
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQP-TSIVSLDFSNNNLEGEIPKGL 209
NK L NL EL L N L P T + L N L+ +PKG+
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGV 152
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTEL 171
F+KL +L L L +N + +P+ F +T L+ L LDNN+ ++P+ + L+ L L
Sbjct: 153 FDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKML 210
Query: 172 HLHGN 176
L N
Sbjct: 211 QLQEN 215
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 123 --HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 30/274 (10%)
Query: 376 AAEVLGNGGLGSSYKAAMANGLTVVVKRIR---EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G + V ++ EM + F E R + + +
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 433 PLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L Y F+ D L +V EYMP G L+ L+ + + + + + FIH
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQ 546
+ +K N+LL + L DF N + + A YISPE ++
Sbjct: 198 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 547 HQ----QLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
Q + D + +G+ + E++ G P + +++ +V S ++ ++ +
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP--FYADS-----LVGTYSKIMNHKNSLTFP 300
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKR 636
D +IS A+N I + ++ L E KR
Sbjct: 301 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 334
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 426 KHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
+HPNI+ + +V+E M G LL + +K S E ++ ++ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDY----VPLLGDFAFHP--------LTNPNHVA 533
+ ++HS+ + H +LK SN+L + + DF F L P + A
Sbjct: 134 VEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLI 593
+++PE ++ Q D++ LGIL+ ++ G Y A G D E + + I
Sbjct: 190 N----FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTRI 240
Query: 594 G 594
G
Sbjct: 241 G 241
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 124 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEHVHQDLKTFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 426 KHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
+HPNI+ + VV+E M G LL + +K S E + ++ +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKT 128
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLG--------DFAFHP--------LTNP 529
+ ++H++ + H +LK SN+L YV G DF F L P
Sbjct: 129 VEYLHAQ----GVVHRDLKPSNIL----YVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+ A +++PE ++ Q D++ LG+L+ ++TG P
Sbjct: 181 CYTAN----FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF--AFHPLTNPNHV----AQT 535
VA G+ F+ AS + H +L + N+LLS+ V + DF A +P+ V A+
Sbjct: 157 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 536 MFAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+++PE I + + +SDV+ G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 124 --HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 30/274 (10%)
Query: 376 AAEVLGNGGLGSSYKAAMANGLTVVVKRIR---EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G + V ++ EM + F E R + + +
Sbjct: 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 433 PLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L Y F+ D L +V EYMP G L+ L+ + + + + + FIH
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQ 546
+ +K N+LL + L DF N + + A YISPE ++
Sbjct: 193 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 547 HQ----QLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
Q + D + +G+ + E++ G P + +++ +V S ++ ++ +
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP--FYADS-----LVGTYSKIMNHKNSLTFP 295
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKR 636
D +IS A+N I + ++ L E KR
Sbjct: 296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 123 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 72 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 125
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 126 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 182
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFP 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 70 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 124 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 30/274 (10%)
Query: 376 AAEVLGNGGLGSSYKAAMANGLTVVVKRIR---EMNQLGRDTFDAEMRRLGRIKHPNILA 432
+V+G G G + V ++ EM + F E R + + +
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 433 PLAYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L Y F+ D L +V EYMP G L+ L+ + + + + + FIH
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQ 546
+ +K N+LL + L DF N + + A YISPE ++
Sbjct: 198 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 547 HQ----QLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAEL 602
Q + D + +G+ + E++ G P + +++ +V S ++ ++ +
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP--FYADS-----LVGTYSKIMNHKNSLTFP 300
Query: 603 IDPEISANAENSIGMMVQLLKIGLACTESEPAKR 636
D +IS A+N I + ++ L E KR
Sbjct: 301 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 334
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + G+ + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFAFPQIKAHPWTKV 270
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + G+ + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFAFPQIKAHPWTKV 270
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 71 VSSLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAI--PEFNKLGALNALYLSSNN 128
++ L+L + +L+G ID A + L + L +N + F LG L+ L+L
Sbjct: 57 LTILWLHSNALAG-IDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 129 FSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPE 184
E P F + LQ L+L +N ++ +L NLT L LHGN +PE
Sbjct: 116 LQELGPG-LFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPS-VPE 169
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 69 GVVSSLFLQNMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIPE-FNKLGALNALYLSSN 127
G ++ LFL + ++ A R + L + L N P F LG L LYL +N
Sbjct: 152 GNLTHLFLHGNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Query: 128 NFSEEIPDDFFAPMTPLQKLWLDNNKFT 155
N S +P + P+ LQ L L++N +
Sbjct: 211 NLS-MLPAEVLVPLRSLQYLRLNDNPWV 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 47/311 (15%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAA-MANG-LTVVVKRIREMNQLGRDTFD---- 416
+KD AD +G G G +KA + NG V +KR+R Q G +
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTI 59
Query: 417 ---AEMRRLGRIKHPNIL-----APLAYHFRRDEKLVVSEYMPKGSLLFLLH-GEKGISH 467
A +R L +HPN++ ++ R + +V E++ + +L E G+
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 468 AELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLT 527
+ +++ + GL F+HS + + H +LK N+L++ L DF +
Sbjct: 120 ETIK-----DMMFQLLRGLDFLHS----HRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 528 NPNHVAQTMFA---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGID 584
+ ++ Y +PE + + D++ +G + E+ K +G D
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK------PLFRGSSD 224
Query: 585 VVEL-----VSSLIGDQDRVAELIDPEI---SANAENSIGMMVQLLKIG----LACTESE 632
V +L V L G++D ++ P S +A+ + + ++G L C
Sbjct: 225 VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 633 PAKRLDLEEAL 643
PAKR+ AL
Sbjct: 285 PAKRISAYSAL 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ F+ + + P + + + GL+F HS
Sbjct: 69 LDVIHTENKLYLVFEFLSMDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 123 --HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEM--RRLGRI--KHPNILA 432
++LG G G + A +K +++ L D + M +R+ + +HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP-FLT 81
Query: 433 PLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ F+ E L V EY+ G L++ + + + I+ GL F+HS
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL-----GLQFLHS 136
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQH 547
+ Y +LK N+LL +D + DF F YI+PE +
Sbjct: 137 KGIVYR----DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 548 QQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGD 595
Q+ + D + G+L+ E++ G+ P G D EL S+ D
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFH-------GQDEEELFHSIRMD 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 413 DTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLL----FLLHGEKGISHA 468
D F E++ + IK+ L DE ++ EYM S+L + +K +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 469 ELNWPTRL--NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPL 526
P ++ IIK V N S+IH+E + H ++K SN+L+ ++ L DF
Sbjct: 148 ---IPIQVIKCIIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 527 TNPNHV--AQTMFAYISPEYIQHQQL--SPKSDVYCLGILILEVITGKFPSQYLSNAKGG 582
+ ++ + ++ PE+ ++ K D++ LGI + + P
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL------K 255
Query: 583 IDVVELVSSLIG-------DQDRVAELIDPEISANAENSIGMM-VQLLKIGLACTESEPA 634
I +VEL +++ D++ + + S + N + + LK+ L PA
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL---RKNPA 312
Query: 635 KRLDLEEALK 644
+R+ E+ALK
Sbjct: 313 ERITSEDALK 322
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT--------RLNIIKGVA 483
L + LV+ E M +G L L + + A N P + + +A
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------ 537
+G++++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 139 DGMAYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGK 189
Query: 538 -----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 44/225 (19%)
Query: 380 LGNGGLGSSYKAAMANGL-------TVVVKRIREMNQLGRDT-FDAEMRRLGRIKHPNIL 431
+G G G ++A A GL V VK ++E F E + +PNI+
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLL-----HGEKGISHAELNWPTR----------- 475
L ++ EYM G L L H +SH++L+ R
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 476 ---LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHV 532
L I + VA G++++ + H +L + N L+ ++ V + DF L+ +
Sbjct: 174 AEQLCIARQVAAGMAYLSER----KFVHRDLATRNCLVGENMVVKIADFG---LSRNIYS 226
Query: 533 AQTMFA---------YISPEYIQHQQLSPKSDVYCLGILILEVIT 568
A A ++ PE I + + + +SDV+ G+++ E+ +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + G+ + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFKFPQIKAHPWTKV 270
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP- 433
LG G GS Y N G V VK+++ + F E++ L + H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 73
Query: 434 --LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
++Y R E +V EY+P G L L + A L+ L + G+ ++
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL-- 127
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHV----AQTMFAYISPEY 544
S H +L + N+L+ + + DF PL V Q+ + +PE
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 545 IQHQQLSPKSDVYCLGILILEVIT 568
+ S +SDV+ G+++ E+ T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FAYI 540
+++++ + H +L + N ++++D+ +GDF + ++
Sbjct: 146 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEHVDQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 16/173 (9%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
HPNI+ + +V E + G L + +K S E ++ I++ + + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAV 119
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPL---LGDFAFHPLTNP-NHVAQT---MFAY 539
S +H + H +LK N+L + + L + DF F L P N +T Y
Sbjct: 120 SHMHD----VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHY 175
Query: 540 ISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSL 592
+PE + D++ LG+++ +++G+ P Q + VE++ +
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPT--------RLNIIKGVA 483
L + LV+ E M +G L L + + A N P + + +A
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------ 537
+G++++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 149 DGMAYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGK 199
Query: 538 -----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 47/311 (15%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAA-MANG-LTVVVKRIREMNQLGRDTFD---- 416
+KD AD +G G G +KA + NG V +KR+R Q G +
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTI 59
Query: 417 ---AEMRRLGRIKHPNIL-----APLAYHFRRDEKLVVSEYMPKGSLLFLLH-GEKGISH 467
A +R L +HPN++ ++ R + +V E++ + +L E G+
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 468 AELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLT 527
+ +++ + GL F+HS + + H +LK N+L++ L DF +
Sbjct: 120 ETIK-----DMMFQLLRGLDFLHS----HRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 528 NPNHVAQTMFA---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGID 584
+ ++ Y +PE + + D++ +G + E+ K +G D
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK------PLFRGSSD 224
Query: 585 VVEL-----VSSLIGDQDRVAELIDPEI---SANAENSIGMMVQLLKIG----LACTESE 632
V +L V L G++D ++ P S +A+ + + ++G L C
Sbjct: 225 VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 633 PAKRLDLEEAL 643
PAKR+ AL
Sbjct: 285 PAKRISAYSAL 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ F+ + + P + + + GL+F HS
Sbjct: 70 LDVIHTENKLYLVFEFLSMDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 124 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V +K+IR + T E+ L + HPNI+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ F+ + + P + + + GL+F HS
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 125 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 139 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 189
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FAYI 540
+++++ + H +L + N ++++D+ +GDF + ++
Sbjct: 137 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 49/312 (15%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAA-MANG-LTVVVKRIREMNQLGRDTFD---- 416
+KD AD +G G G +KA + NG V +KR+R Q G +
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTI 59
Query: 417 ---AEMRRLGRIKHPNIL-----APLAYHFRRDEKLVVSEYMPKGSLLFLLH-GEKGISH 467
A +R L +HPN++ ++ R + +V E++ + +L E G+
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 468 AELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLT 527
+ +++ + GL F+HS + + H +LK N+L++ L DF +
Sbjct: 120 ETIK-----DMMFQLLRGLDFLHS----HRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
Query: 528 N----PNHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGI 583
+ V T++ Y +PE + + D++ +G + E+ K +G
Sbjct: 171 SFQMALTSVVVTLW-YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK------PLFRGSS 223
Query: 584 DVVEL-----VSSLIGDQDRVAELIDPEI---SANAENSIGMMVQLLKIG----LACTES 631
DV +L V L G++D ++ P S +A+ + + ++G L C
Sbjct: 224 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 632 EPAKRLDLEEAL 643
PAKR+ AL
Sbjct: 284 NPAKRISAYSAL 295
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 143 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 193
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 145 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 195
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 145 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 195
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 152 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 202
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 146 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 196
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEM--RRLGRI--KHPNILA 432
++LG G G + A +K +++ L D + M +R+ + +HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP-FLT 82
Query: 433 PLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ F+ E L V EY+ G L++ + + + I+ GL F+HS
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL-----GLQFLHS 137
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQH 547
+ Y +LK N+LL +D + DF F YI+PE +
Sbjct: 138 KGIVYR----DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 548 QQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGD 595
Q+ + D + G+L+ E++ G+ P G D EL S+ D
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFH-------GQDEEELFHSIRMD 234
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP- 433
LG G GS Y N G V VK+++ + F E++ L + H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 76
Query: 434 --LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
++Y R +V EY+P G L L + A L+ L + G+ ++
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL-- 130
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHV----AQTMFAYISPEY 544
S H +L + N+L+ + + DF PL +V Q+ + +PE
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 545 IQHQQLSPKSDVYCLGILILEVIT 568
+ S +SDV+ G+++ E+ T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 22/203 (10%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILA-- 432
LG G GS Y N G V VK+++ + F E++ L + I+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
++Y R +V EY+P G L L + A L+ L + G+ ++
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL--- 131
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHV----AQTMFAYISPEYI 545
S H +L + N+L+ + + DF PL +V Q+ + +PE +
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 546 QHQQLSPKSDVYCLGILILEVIT 568
S +SDV+ G+++ E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTP 143
D+ AL+++ LT + L N ++P F+KL L L L N + +PD F +T
Sbjct: 77 DISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTN 134
Query: 144 LQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETI--QPTSIVSLDFSNNNL 201
L L L +N+ L NLTEL L N L PE + + T + L N L
Sbjct: 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL-PEGVFDKLTQLKDLRLYQNQL 193
Query: 202 EGEIPKGL 209
+ +P G+
Sbjct: 194 KS-VPDGV 200
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 92 QIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWL 149
++ LT + L N ++PE F+KL L L L N + +PD F +T LQ +WL
Sbjct: 155 KLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWL 212
Query: 150 DNNKFTGKIP 159
+N + P
Sbjct: 213 HDNPWDCTCP 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 380 LGNGGLGS----SYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAP- 433
LG G GS Y N G V VK+++ + F E++ L + H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 89
Query: 434 --LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
++Y R +V EY+P G L L + A L+ L + G+ ++
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYL-- 143
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH---PLTNPNHV----AQTMFAYISPEY 544
S H +L + N+L+ + + DF PL +V Q+ + +PE
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 545 IQHQQLSPKSDVYCLGILILEVIT 568
+ S +SDV+ G+++ E+ T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 39/235 (16%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEK---LVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ L ++ HPNI+ Y F D++ LV+ Y +G LF ++ I + +
Sbjct: 54 EVAVLKQLDHPNIMK--LYEFFEDKRNYYLVMEVY--RGGELF----DEIILRQKFSEVD 105
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNH 531
I+K V +G +++H + + H +LK N+LL S+D + + DF
Sbjct: 106 AAVIMKQVLSGTTYLHK----HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 532 VAQTMFA---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVEL 588
+ YI+PE ++ ++ K DV+ G+++ ++ G P GG E+
Sbjct: 162 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF-------GGQTDQEI 213
Query: 589 VSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEAL 643
+ + ++ DP + +V+L+ EP+KR+ EEAL
Sbjct: 214 LKRV----EKGKFSFDPPDWTQVSDEAKQLVKLM------LTYEPSKRISAEEAL 258
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 80
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 138
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 139 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 252
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 253 PNYTEFKFPQIKAHPWTKV 271
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 82/222 (36%), Gaps = 42/222 (18%)
Query: 379 VLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHP--------- 428
VLG G G KA A + +K+IR + T +E+ L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 429 ----NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
N + P ++ + EY +L L+H E + W + + +
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----------------PLT 527
LS+IHS+ + H NLK N+ + + +GDF P +
Sbjct: 128 ALSYIHSQ----GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 528 NPNHVAQTMFA-YISPEYIQHQ-QLSPKSDVYCLGILILEVI 567
+ N + A Y++ E + + K D Y LGI+ E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 113
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 168
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 169 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 282
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 283 EMNPNYTEFKFPQIKAH 299
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 39/262 (14%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 98
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 153
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 154 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 209
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 267
Query: 599 -----VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 268 EMNPNYTEFKFPQIKAHPWTKV 289
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFKFPQIKAHPWTKV 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFKFPQIKAHPWTKV 270
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V + +IR + T E+ L + HPNI+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 122 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 377 AEVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHPNILAP 433
E +G G G YKA G V + +IR + T E+ L + HPNI+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
L ++ +V E++ + F+ + + P + + + GL+F HS
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----PLTNPNHVAQTMFAYISPE-YIQH 547
+ + H +LK N+L++ + L DF P+ H T++ Y +PE +
Sbjct: 121 --HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 548 QQLSPKSDVYCLGILILEVITGK--FP 572
+ S D++ LG + E++T + FP
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 139
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + + Y++PE + ++ D
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 200 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 253
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 254 MLIRNLLK-------TEPTQRMTITEFM 274
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 39/262 (14%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 91
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 146
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 147 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 260
Query: 599 -----VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 261 EMNPNYTEFKFPQIKAHPWTKV 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 87
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 145
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 146 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 259
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 260 PNYTEFKFPQIKAHPWTKV 278
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 83
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 141
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 142 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 255
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 256 PNYTEFKFPQIKAHPWTKV 274
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 91
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 146
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 147 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 260
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 261 EMNPNYTEFKFPQIKAH 277
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 39/235 (16%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEK---LVVSEYMPKGSLLFLLHGEKGISHAELNWPT 474
E+ L ++ HPNI+ Y F D++ LV+ Y +G LF ++ I + +
Sbjct: 71 EVAVLKQLDHPNIMK--LYEFFEDKRNYYLVMEVY--RGGELF----DEIILRQKFSEVD 122
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNH 531
I+K V +G +++H + + H +LK N+LL S+D + + DF
Sbjct: 123 AAVIMKQVLSGTTYLHK----HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 532 VAQTMFA---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVEL 588
+ YI+PE ++ ++ K DV+ G+++ ++ G P GG E+
Sbjct: 179 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF-------GGQTDQEI 230
Query: 589 VSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEAL 643
+ + ++ DP + +V+L+ EP+KR+ EEAL
Sbjct: 231 LKRV----EKGKFSFDPPDWTQVSDEAKQLVKLM------LTYEPSKRISAEEAL 275
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 379 VLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHP--------- 428
VLG G G KA A + +K+IR + T +E+ L + H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 429 ----NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVAN 484
N + P+ ++ + EY +L L+H E + W + + +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFH-----------------PLT 527
LS+IHS+ + H +LK N+ + + +GDF P +
Sbjct: 128 ALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 528 NPNHVAQTMFA-YISPEYIQHQ-QLSPKSDVYCLGILILEVI 567
+ N + A Y++ E + + K D+Y LGI+ E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N ++++D+ +GDF + +T +
Sbjct: 174 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGM-----TRDIYETDYYRKGGKGLL 224
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 79
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 137
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 251
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 252 PNYTEFKFPQIKAHPWTKV 270
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 92
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
Y F ++DE +V +Y+P+ H + + + +L + + + L++
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAY 150
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEY 544
IH S+ + H ++K N+LL D L L DF PN Y +PE
Sbjct: 151 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR--- 598
I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMN 264
Query: 599 --VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 265 PNYTEFKFPQIKAHPWTKV 283
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 113
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 168
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 169 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 224
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 282
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 283 EMNPNYTEFKFPQIKAH 299
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 107
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 162
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 163 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 218
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 276
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 277 EMNPNYTEFKFPQIKAH 293
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 84
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 139
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 140 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 195
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 253
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 254 EMNPNYTEFKFPQIKAH 270
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 115
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 170
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHP---LTNPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 171 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 226
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 284
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 285 EMNPNYTEFKFPQIKAH 301
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 117
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 172
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHP---LTNPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 173 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 228
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 286
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 287 EMNPNYTEFKFPQIKAH 303
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 39/257 (15%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+ L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVR-LR 158
Query: 436 YHF-----RRDEKL--VVSEYMPKGSLLFLLHGEKGISHAELNWP---TRLNIIKGVANG 485
Y F ++DE +V +Y+P+ H S A+ P +L + + +
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ-LFRS 213
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHP---LTNPNHVAQTMFAYIS 541
L++IH S+ + H ++K N+LL D L L DF PN Y +
Sbjct: 214 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 269
Query: 542 PEYI-QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR 598
PE I + DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIR 327
Query: 599 -----VAELIDPEISAN 610
E P+I A+
Sbjct: 328 EMNPNYTEFKFPQIKAH 344
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYI----QHQQLS 551
H ++K SN+LL + L DF + +A+T A Y++PE I Q
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQGYD 207
Query: 552 PKSDVYCLGILILEVITGKFP 572
+SDV+ LGI + E+ TG+FP
Sbjct: 208 VRSDVWSLGITLYELATGRFP 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 147
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 208 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 261
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 262 MLIRNLLK-------TEPTQRMTITEFM 282
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 146
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 207 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 260
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 261 MLIRNLLK-------TEPTQRMTITEFM 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 445 VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLK 504
++ E++P GSL L K ++N +L + G+ ++ S + H +L
Sbjct: 102 LIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL----GSRQYVHRDLA 153
Query: 505 SSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-------FAYISPEYIQHQQLSPKSDVY 557
+ NVL+ ++ +GDF + T+ + +PE + + SDV+
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 558 CLGILILEVIT 568
G+ + E++T
Sbjct: 214 SFGVTLHELLT 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 140
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 201 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 254
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 255 MLIRNLLK-------TEPTQRMTITEFM 275
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 445 VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLK 504
++ E++P GSL L K ++N +L + G+ ++ S + H +L
Sbjct: 90 LIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYL----GSRQYVHRDLA 141
Query: 505 SSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-------FAYISPEYIQHQQLSPKSDVY 557
+ NVL+ ++ +GDF + T+ + +PE + + SDV+
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 558 CLGILILEVIT 568
G+ + E++T
Sbjct: 202 SFGVTLHELLT 212
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 145
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 206 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 259
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 260 MLIRNLLK-------TEPTQRMTITEFM 280
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---HV 532
+ ++ V+ G+ ++ H +L + NVLL + + DF + +
Sbjct: 108 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 533 AQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 155
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 216 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 269
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 270 MLIRNLLK-------TEPTQRMTITEFM 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 380 LGNGGLGSSYKAAMANGLT-------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
LG G G Y+ +A G+ V +K + E + R F E + +++
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHG-----EKGISHAELNWPTRLNIIKGVANGL 486
L + LV+ E M +G L L E A + + + +A+G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF--------- 537
+++++ + H +L + N +++D+ +GDF + +T +
Sbjct: 139 AYLNAN----KFVHRDLAARNCXVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLL 189
Query: 538 --AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++SPE ++ + SDV+ G+++ E+ T + P Q LSN +
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 139
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 200 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 253
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK +EP +R+ + E
Sbjct: 254 MLIRNLLK-------TEPTQRMTITE 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---HV 532
+ ++ V+ G+ ++ H +L + NVLL + + DF + +
Sbjct: 120 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 533 AQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---HV 532
+ ++ V+ G+ ++ H +L + NVLL + + DF + +
Sbjct: 110 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 533 AQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 141
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 202 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 255
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK +EP +R+ + E
Sbjct: 256 MLIRNLLK-------TEPTQRMTITE 274
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---HV 532
+ ++ V+ G+ ++ H +L + NVLL + + DF + +
Sbjct: 114 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 533 AQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 141
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 202 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 255
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEEAL 643
++ LLK +EP +R+ + E +
Sbjct: 256 MLIRNLLK-------TEPTQRMTITEFM 276
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 185
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 246 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 299
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK +EP +R+ + E
Sbjct: 300 MLIRNLLK-------TEPTQRMTITE 318
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 377 AEVLGNGGLGSSYKAAMAN-GLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+V+GNG G Y+A + + G V +K++ + + + E++ + ++ H NI+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 80
Query: 436 YHFRRDEKL------VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
+ + EK +V +Y+P+ H + + + +L + + + L++I
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLT---NPNHVAQTMFAYISPEYI 545
H S+ + H ++K N+LL D L L DF PN Y +PE I
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 546 -QHQQLSPKSDVYCLGILILEVITGK--FPSQYLSNAKGGIDVVELVSSLIGDQDR---- 598
+ DV+ G ++ E++ G+ FP S +++++++ + +Q R
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 599 -VAELIDPEISANAENSI 615
E P+I A+ +
Sbjct: 253 NYTEFKFPQIKAHPWTKV 270
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 30/216 (13%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVK----RIREMNQLGRDTFDAEMRRLGRIKHPNILAPLA 435
+G G + YK + TV V + R++ + R F E L ++HPNI+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV---- 88
Query: 436 YHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK---------GVANGL 486
F + V KG +L E S + R + K + GL
Sbjct: 89 -RFYDSWESTV-----KGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPL-LGDFAFHPLTNPNHVAQTMFA--YISPE 543
F+H+ + + H +LK N+ ++ + +GD L + + + +PE
Sbjct: 143 QFLHTR--TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE 200
Query: 544 YIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNA 579
+ ++ DVY G LE T ++P NA
Sbjct: 201 XYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNA 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---HV 532
+ ++ V+ G+ ++ H +L + NVLL + + DF + +
Sbjct: 114 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 533 AQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 27/205 (13%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAE-MRRLGRIKHPNILAPLAYH 437
LG G G ++ G VK++R + F AE + + P I+ PL
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIV-PLYGA 153
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
R + + + +G L L E+G L L + GL ++HS
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQALEGLEYLHSR----R 205
Query: 498 LPHGNLKSSNVLLSQDYV-PLLGDFAFHPLTNPNHVAQTMF---------AYISPEYIQH 547
+ HG++K+ NVLLS D L DF P+ + +++ +++PE +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 548 QQLSPKSDVYCLGILILEVITGKFP 572
+ K DV+ ++L ++ G P
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRI---REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
+V+G G G M N + +I EM + E R + + L
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 435 AYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLN--IIKGVANGLSFIHS 491
Y F+ + L +V +Y G LL LL S E P + I + + IH
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLL------SKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQ 546
H ++K NVLL + L DF N + Q+ A YISPE +Q
Sbjct: 210 ----LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 265
Query: 547 HQQ-----LSPKSDVYCLGILILEVITGKFP 572
+ P+ D + LG+ + E++ G+ P
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 476 LNIIKGVANGLSFIH-SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---H 531
+ ++ V+ G+ ++ S F H +L + NVLL + + DF + +
Sbjct: 130 IELVHQVSMGMKYLEESNFV-----HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 532 VAQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 476 LNIIKGVANGLSFIH-SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---H 531
+ ++ V+ G+ ++ S F H +L + NVLL + + DF + +
Sbjct: 130 IELVHQVSMGMKYLEESNFV-----HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 532 VAQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRI---REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
+V+G G G M N + +I EM + E R + + L
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 435 AYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLN--IIKGVANGLSFIHS 491
Y F+ + L +V +Y G LL LL S E P + I + + IH
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLL------SKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQ 546
H ++K NVLL + L DF N + Q+ A YISPE +Q
Sbjct: 194 ----LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 547 HQQ-----LSPKSDVYCLGILILEVITGKFP 572
+ P+ D + LG+ + E++ G+ P
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I+K + + ++HS + H
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 191
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSI 615
++ LG+++ ++ G P + SN I +G E +PE S +E
Sbjct: 252 MWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQ----YEFPNPEWSEVSEEVK 305
Query: 616 GMMVQLLKIGLACTESEPAKRLDLEE 641
++ LLK +EP +R+ + E
Sbjct: 306 MLIRNLLK-------TEPTQRMTITE 324
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQD-YVPLLGDFAFHPLTNPNHVAQTMF----- 537
GL ++H+ + HG++K+ NVLLS D L DF P+ + +++
Sbjct: 161 EGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP-SQYL 576
+++PE + + K D++ ++L ++ G P +QY
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 476 LNIIKGVANGLSFIH-SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---H 531
+ ++ V+ G+ ++ S F H +L + NVLL + + DF + +
Sbjct: 128 IELVHQVSMGMKYLEESNFV-----HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 532 VAQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 141
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------- 537
G+++++++ + H NL + N +++ D+ +GDF + +T +
Sbjct: 142 GMAYLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGM-----TRDIYETDYYRKGGKG 192
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 142
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------- 537
G+++++++ + H NL + N +++ D+ +GDF + +T +
Sbjct: 143 GMAYLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGM-----TRDIYETDYYRKGGKG 193
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQD-YVPLLGDFAFHPLTNPNHVAQTMF----- 537
GL ++H+ + HG++K+ NVLLS D L DF P+ + +++
Sbjct: 175 EGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP-SQYL 576
+++PE + + K D++ ++L ++ G P +QY
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 274
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 484 NGLSFIHSEFASYELPHGNLKSSNVLLSQD-YVPLLGDFAFHPLTNPNHVAQTMF----- 537
GL ++H+ + HG++K+ NVLLS D L DF P+ + +++
Sbjct: 177 EGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 232
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP-SQYL 576
+++PE + + K D++ ++L ++ G P +QY
Sbjct: 233 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD--TFDAEMRRLGRIKHPNI---- 430
E LG G + GL K I RD + E R +++HPNI
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 431 --LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
+ ++H+ +V + + G L + + S A+ + + I+ + +++
Sbjct: 71 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 119
Query: 489 IHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA----YIS 541
HS + H NLK N+LL+ + L DF N + A FA Y+S
Sbjct: 120 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 174
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ S D++ G+++ ++ G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 426 KHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
+HPNI+ + VV+E G LL + +K S E + ++ +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS-----AVLFTITKT 128
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLG--------DFAFHP--------LTNP 529
+ ++H++ + H +LK SN+L YV G DF F L P
Sbjct: 129 VEYLHAQ----GVVHRDLKPSNIL----YVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 530 NHVAQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELV 589
+ A +++PE ++ Q D++ LG+L+ +TG Y A G D E +
Sbjct: 181 CYTAN----FVAPEVLERQGYDAACDIWSLGVLLYTXLTG-----YTPFANGPDDTPEEI 231
Query: 590 SSLIG 594
+ IG
Sbjct: 232 LARIG 236
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
FN L +L L ++SN + +PD F +T LQK+WL N + P
Sbjct: 490 FNSLSSLQVLNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD--TFDAEMRRLGRIKHPNI---- 430
E LG G + GL K I RD + E R +++HPNI
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 431 --LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
+ ++H+ +V + + G L + + S A+ + + I+ + +++
Sbjct: 72 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 120
Query: 489 IHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA----YIS 541
HS + H NLK N+LL+ + L DF N + A FA Y+S
Sbjct: 121 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 175
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ S D++ G+++ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 377 AEVLGNGGLGS---SYKAAMAN--GLTVVVKRIREMNQL-GRDTFDAEMRRLGRIKHPNI 430
+ LG G G +Y L ++ K++ + + GR + E+ L ++HP+I
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHI 75
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ +DE ++V EY +++ +K +S E + + + + + H
Sbjct: 76 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEAR-----RFFQQIISAVEYCH 129
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQH 547
+++ H +LK N+LL + + DF + + +T Y +PE I
Sbjct: 130 ----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 185
Query: 548 QQLS-PKSDVYCLGILILEVITGKFP 572
+ + P+ DV+ G+++ ++ + P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 377 AEVLGNGGLGS---SYKAAMAN--GLTVVVKRIREMNQL-GRDTFDAEMRRLGRIKHPNI 430
+ LG G G +Y L ++ K++ + + GR + E+ L ++HP+I
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHI 76
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ +DE ++V EY +++ +K +S E + + + + + H
Sbjct: 77 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEAR-----RFFQQIISAVEYCH 130
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQH 547
+++ H +LK N+LL + + DF + + +T Y +PE I
Sbjct: 131 ----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 186
Query: 548 QQLS-PKSDVYCLGILILEVITGKFP 572
+ + P+ DV+ G+++ ++ + P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 476 LNIIKGVANGLSFIH-SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---H 531
+ ++ V+ G+ ++ S F H +L + NVLL + + DF + +
Sbjct: 472 IELVHQVSMGMKYLEESNFV-----HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 532 VAQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 57 CTDKWQGVMCI--------NGVVSSLFLQNMSLSGT--IDVEALRQIAGLTSIAL-QNNF 105
C++++ V+C+ +G+ ++ L N+ + I V + + + L + L +N+
Sbjct: 41 CSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI 100
Query: 106 FTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNN 152
T I FN L LN L L N + IP+ F ++ L++LWL NN
Sbjct: 101 RTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNN 146
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 110 IPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLT 169
IP L L+ L LS N+ S P F M LQKLW+ ++ ++ NLQ+L
Sbjct: 200 IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLV 258
Query: 170 ELHLHGNGFSGLIPETIQP 188
E++L N + L + P
Sbjct: 259 EINLAHNNLTLLPHDLFTP 277
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD--TFDAEMRRLGRIKHPNI---- 430
E LG G + GL K I RD + E R +++HPNI
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 431 --LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
+ ++H+ +V + + G L + + S A+ + + I+ + +++
Sbjct: 72 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 120
Query: 489 IHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA----YIS 541
HS + H NLK N+LL+ + L DF N + A FA Y+S
Sbjct: 121 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 175
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ S D++ G+++ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 476 LNIIKGVANGLSFIH-SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN---H 531
+ ++ V+ G+ ++ S F H +L + NVLL + + DF + +
Sbjct: 473 IELVHQVSMGMKYLEESNFV-----HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 532 VAQTM----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
AQT + +PE I + + S KSDV+ G+L+ E +
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 13/201 (6%)
Query: 377 AEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
AE LG G G ++ + + + ++ + E+ L +H NIL L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL-HLHE 68
Query: 437 HFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASY 496
F E+LV+ G +F S ELN ++ + V L F+HS +
Sbjct: 69 SFESMEELVMIFEFISGLDIF---ERINTSAFELNEREIVSYVHQVCEALQFLHS----H 121
Query: 497 ELPHGNLKSSNVLLSQDYVPLLG--DFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLS 551
+ H +++ N++ + +F P + +F Y +PE QH +S
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 552 PKSDVYCLGILILEVITGKFP 572
+D++ LG L+ +++G P
Sbjct: 182 TATDMWSLGTLVYVLLSGINP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 377 AEVLGNGGLGS---SYKAAMAN--GLTVVVKRIREMNQL-GRDTFDAEMRRLGRIKHPNI 430
+ LG G G +Y L ++ K++ + + GR + E+ L ++HP+I
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHI 70
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ +DE ++V EY +++ +K +S E + + + + + H
Sbjct: 71 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEAR-----RFFQQIISAVEYCH 124
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQH 547
+++ H +LK N+LL + + DF + + +T Y +PE I
Sbjct: 125 ----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 180
Query: 548 QQLS-PKSDVYCLGILILEVITGKFP 572
+ + P+ DV+ G+++ ++ + P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR------EMNQLGRDTFDAEMRRLGRIKHPNILA 432
LG G G K + +G + VKRIR E +L D D MR + P +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMD-LDISMRT---VDCPFTVT 114
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL--NIIKGVANGLSFIH 490
FR + + E M F K + P + I + L +H
Sbjct: 115 FYGALFREGDVWICMELMDTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S+ + + H ++K SNVL++ + DF + VA+T+ A Y++PE I
Sbjct: 171 SKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERIN 226
Query: 547 ----HQQLSPKSDVYCLGILILEVITGKFP 572
+ S KSD++ LGI ++E+ +FP
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 377 AEVLGNGGLGS---SYKAAMAN--GLTVVVKRIREMNQL-GRDTFDAEMRRLGRIKHPNI 430
+ LG G G +Y L ++ K++ + + GR + E+ L ++HP+I
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHI 66
Query: 431 LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
+ +DE ++V EY +++ +K +S E + + + + + H
Sbjct: 67 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEAR-----RFFQQIISAVEYCH 120
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQH 547
+++ H +LK N+LL + + DF + + +T Y +PE I
Sbjct: 121 ----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 176
Query: 548 QQLS-PKSDVYCLGILILEVITGKFP 572
+ + P+ DV+ G+++ ++ + P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 422 LGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKG 481
L + HP I+ + ++ +Y+ G L LL + + P
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN-----PVAKFYAAE 114
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA--- 538
V L ++HS+ ++ + +LK N+LL ++ + DF F +V +
Sbjct: 115 VCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGF-----AKYVPDVTYXLCG 165
Query: 539 ---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
YI+PE + + + D + GILI E++ G P
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 378 EVLGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRD--TFDAEMRRLGRIKHPNI---- 430
E LG G + GL K I RD + E R +++HPNI
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 431 --LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
+ ++H+ +V + + G L + + S A+ + + I+ + +++
Sbjct: 95 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 143
Query: 489 IHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA----YIS 541
HS + H NLK N+LL+ + L DF N + A FA Y+S
Sbjct: 144 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 198
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ S D++ G+++ ++ G P
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
HPNI+ + +V + M KG L L + +S E TR I++ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE----TR-KIMRALLEVI 137
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF---AYISPE 543
+H + H +LK N+LL D L DF F +P +++ +Y++PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 544 YIQ------HQQLSPKSDVYCLGILILEVITGKFP 572
I+ H + D++ G+++ ++ G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 27/205 (13%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIREMNQLGRDTFDAE-MRRLGRIKHPNILAPLAYH 437
LG G G ++ G VK++R + F AE + + P I+ PL
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIV-PLYGA 134
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
R + + + +G L L E+G L L + GL ++HS
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQALEGLEYLHSR----R 186
Query: 498 LPHGNLKSSNVLLSQDYV-PLLGDFAFHPLTNPNHVAQTMF---------AYISPEYIQH 547
+ HG++K+ NVLLS D L DF P+ + + + +++PE +
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 548 QQLSPKSDVYCLGILILEVITGKFP 572
+ K DV+ ++L ++ G P
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EYMP G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EYMP G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 141
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------- 537
G+++++++ + H +L + N +++ D+ +GDF + +T +
Sbjct: 142 GMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETAYYRKGGKG 192
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 378 EVLGNGGLG-----SSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILA 432
E LG G G + YK L + +++ + + + + E+ L ++HP+I+
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRV-EREISYLKLLRHPHIIK 73
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ ++V EY G L + +K ++ E + + + + H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-----RFFQQIICAIEYCHR- 126
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQ 549
+++ H +LK N+LL + + DF + + +T Y +PE I +
Sbjct: 127 ---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 550 LS-PKSDVYCLGILILEVITGKFP 572
+ P+ DV+ GI++ ++ G+ P
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L ++ H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 111
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 172 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 275
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 157 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 111
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 172 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
HPNI+ + +V + M KG L L + +S E TR I++ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE----TR-KIMRALLEVI 124
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF---AYISPE 543
+H + H +LK N+LL D L DF F +P + + +Y++PE
Sbjct: 125 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 544 YIQ------HQQLSPKSDVYCLGILILEVITGKFP 572
I+ H + D++ G+++ ++ G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L ++ H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 97
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 158 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 261
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 427 HPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
HP L L F+ + +L V EY+ G L+F + ++ + + + ++
Sbjct: 112 HP-FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISLA 165
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFA---YIS 541
L+++H Y +LK NVLL + L D+ P T YI+
Sbjct: 166 LNYLHERGIIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ + D + LG+L+ E++ G+ P
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 157 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 260
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 138
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FA 538
G+++++++ + H +L + N +++ D+ +GDF +
Sbjct: 139 GMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 539 YISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 113
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 174 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 277
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 158 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 261
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
F K+ L L L+SN + +PD F +T LQK+WL N + P
Sbjct: 190 FGKMPKLKQLNLASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 235
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 158 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 261
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 88
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 149 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 252
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 141
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FA 538
G+++++++ + H +L + N +++ D+ +GDF +
Sbjct: 142 GMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 539 YISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L Y F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 285
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNN 199
L L+ N+ P S NL+NLT L L+ N S + P + T + L FSNN
Sbjct: 286 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISPVS-SLTKLQRLFFSNN 336
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
HPNI+ + +V + M KG L L + +S E TR I++ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE----TR-KIMRALLEVI 137
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF---AYISPE 543
+H + H +LK N+LL D L DF F +P + + +Y++PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 544 YIQ------HQQLSPKSDVYCLGILILEVITGKFP 572
I+ H + D++ G+++ ++ G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 286
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNN 199
L L+ N+ P S NL+NLT L L+ N S + P + T + L FSNN
Sbjct: 287 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISPVS-SLTKLQRLFFSNN 337
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L Y F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L Y F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS-EQDELDFLMEALIISKFNHQNIV 111
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 172 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 275
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 103
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 164 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 267
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 141
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM------FA 538
G+++++++ + H +L + N +++ D+ +GDF +
Sbjct: 142 GMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 539 YISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 380 LGNGGLGSSYKAAMANGLT------VVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
LG G G Y+ + + V VK + E L R F E + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVAN 484
L + LVV E M G L L + AE N P R + + +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIAD 141
Query: 485 GLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF------- 537
G+++++++ + H +L + N +++ D+ +GDF + +T +
Sbjct: 142 GMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETDYYRKGGKG 192
Query: 538 ----AYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
+++PE ++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 96 LTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNK 153
LT + L+ N + ++P F+ L L +S+NN E I DD F T LQ L L +N+
Sbjct: 125 LTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNL-ERIEDDTFQATTSLQNLQLSSNR 182
Query: 154 FTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNL 201
T ++L + L H N L+ P ++ LD S+N++
Sbjct: 183 LTH------VDLSLIPSL-FHANVSYNLLSTLAIPIAVEELDASHNSI 223
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 131 EEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT- 189
EEI FA +QKL++ N P N+ LT L L N S L T
Sbjct: 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147
Query: 190 SIVSLDFSNNNLE 202
+ +L SNNNLE
Sbjct: 148 KLTTLSMSNNNLE 160
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 32/157 (20%)
Query: 444 LVVSEYMPKGSLLFLLHGEKGISHAELNWPTR--------LNIIKGVANGLSFIHSEFAS 495
LVV E M G L L + AE N P R + + +A+G+++++++
Sbjct: 95 LVVMELMAHGDLKSYLRSLR--PEAENN-PGRPPPTLQEMIQMAAEIADGMAYLNAK--- 148
Query: 496 YELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF-----------AYISPEY 544
+ H +L + N +++ D+ +GDF + +T + +++PE
Sbjct: 149 -KFVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETDYYRKGGKGLLPVRWMAPES 202
Query: 545 IQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAK 580
++ + SD++ G+++ E+ + + P Q LSN +
Sbjct: 203 LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 114
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHP------LTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 175 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 278
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 123
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFH------PLTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 184 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 287
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 38/210 (18%)
Query: 444 LVVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHG 501
L+V E + G L + G++ + E + I K + + ++HS + H
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREAS-----EIXKSIGEAIQYLHS----INIAHR 185
Query: 502 NLKSSNVLLSQ---DYVPLLGDFAF-HPLTNPNHVAQTMFA--YISPEYIQHQQLSPKSD 555
++K N+L + + + L DF F T+ N + + Y++PE + ++ D
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 556 VYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGDQDRVA----ELIDPEISANA 611
+ LG++ ++ G P + SN I G + R+ E +PE S +
Sbjct: 246 XWSLGVIXYILLCGYPP--FYSNHGLAISP--------GXKTRIRXGQYEFPNPEWSEVS 295
Query: 612 ENSIGMMVQLLKIGLACTESEPAKRLDLEE 641
E ++ LLK +EP +R + E
Sbjct: 296 EEVKXLIRNLLK-------TEPTQRXTITE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 380 LGNGGLGSSYKAAMA------NGLTVVVKRIREMNQLGRDTFDAEMRRL--GRIKHPNIL 431
LG+G G Y+ ++ + L V VK + E+ +D D M L + H NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 137
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISH--AELNWPTRLNIIKGVANGLSFI 489
+ + + ++ E M G L L + + L L++ + +A G ++
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 490 HSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHP------LTNPNHVAQTMFAYI 540
H ++ + N LL+ V +GDF A ++
Sbjct: 198 EEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYLSNAKGGIDVVELVSS 591
PE + K+D + G+L+ E+ + G P SN +V+E V+S
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS 301
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 109
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V+ M G+ L+ L + +S+ + + + + GL +I
Sbjct: 110 IRAPTIEQMK--DVYLVTHLM--GADLYKLLKTQHLSNDHICY-----FLYQILRGLKYI 160
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 161 HSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 128/332 (38%), Gaps = 69/332 (20%)
Query: 370 ADLMKAAAEV---LGNGGLGSSYKAA--MANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D++ A E+ LG G G + A G V VK ++ +++ +A +
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC----EAARSEIQV 64
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELN--WPTRLNIIKGV 482
++H N P + FR + L E+ ++F L G + N P RL+ I+ +
Sbjct: 65 LEHLNTTDPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 483 A----NGLSFIHSEFASYELPHGNLKSSNVLLSQ-DYV----------------PLLGDF 521
A ++F+HS +L H +LK N+L Q DY P +
Sbjct: 124 AYQICKSVNFLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 522 AFHPLTNPNHVAQTMFA---YISPEYIQHQQLSPKSDVYCLGILILEVITG--KFPSQYL 576
F T + T+ + Y +PE I S DV+ +G +++E G FP+
Sbjct: 180 DFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH-- 237
Query: 577 SNAKGGIDVVELV-----SSLIGDQDRVAELIDPEISANAENSIGMMV------------ 619
++K + ++E + +I + + + +S G V
Sbjct: 238 -DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 620 -------QLLKIGLACTESEPAKRLDLEEALK 644
+L + E +PAKR+ L EALK
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALK 328
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 379 VLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILAP 433
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
+ + ++ E G L L + L+ + + ++ L+++ S+
Sbjct: 79 IGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK- 132
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQ 548
H ++ + NVL+S + LGDF + + +++PE I +
Sbjct: 133 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 549 QLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
+ + SDV+ G+ + E++ G P Q + N
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L + L+ + + ++ L+++ S
Sbjct: 78 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 132
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 133 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 379 VLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILAP 433
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 434 LAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
+ + ++ E G L L K L+ + + ++ L+++ S+
Sbjct: 74 IGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESK- 127
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQHQ 548
H ++ + NVL+S + LGDF + + +++PE I +
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 549 QLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
+ + SDV+ G+ + E++ G P Q + N
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L K L+ + + ++ L+++ S
Sbjct: 80 KLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES 134
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 135 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L K L+ + + ++ L+++ S
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES 129
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 130 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 96 LTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFT 155
+T + L N FT E + L + LS+N S + + F+ MT L L L N+
Sbjct: 33 VTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIST-LSNQSFSNMTQLLTLILSYNRLR 91
Query: 156 GKIPDSLMNLQNLTELHLHGNGFSGLIPE 184
P + L++L L LHGN S ++PE
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDIS-VVPE 119
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + L V +K + R+ F E + + HP+I+
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L K L+ + + ++ L+++ S
Sbjct: 103 KLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES 157
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 158 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 76 LQNMSLSGT--IDVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEI 133
L +SL+G D+ L + LT + L NN + P + L L L L +N S
Sbjct: 222 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNIS 280
Query: 134 PDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVS 193
P A +T L L L+ N+ P S NL+NLT L L+ N S + P + T +
Sbjct: 281 P---LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISPVS-SLTKLQR 334
Query: 194 LDFSNN 199
L F+NN
Sbjct: 335 LFFANN 340
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + + V +K + R+ F E + + HP+I+
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L K L+ + + ++ L+++ S
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES 129
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 130 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 427 HPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
HP L L F+ + +L V EY+ G L+F + ++ + + + ++
Sbjct: 80 HP-FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISLA 133
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA-----FHPLTNPNHVAQTMFAYI 540
L+++H Y +LK NVLL + L D+ P + T YI
Sbjct: 134 LNYLHERGIIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-NYI 188
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+PE ++ + D + LG+L+ E++ G+ P
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 22/209 (10%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRI---REMNQLGRDTFDAEMRRLGRIKHPNILAPL 434
+V+G G G + N V +I EM + E R + + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 435 AYHFRRDEKL-VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEF 493
Y F+ D L +V +Y G LL LL + E+ R + + V + +H
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM---ARFYLAEMVI-AIDSVHQ-- 193
Query: 494 ASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-----YISPEYIQHQ 548
H ++K N+L+ + L DF + Q+ A YISPE +Q
Sbjct: 194 --LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 549 Q-----LSPKSDVYCLGILILEVITGKFP 572
+ P+ D + LG+ + E++ G+ P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 115 KLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
KL AL L ++SN + +PD F +T LQK+WL N + P
Sbjct: 442 KLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 477 NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF----AFHPLTN--PN 530
+++ + NGL +IH ++ H ++K++NVL+++D V L DF AF N PN
Sbjct: 128 RVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 531 HVAQTMFA--YISPEYIQHQQ-LSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVE 587
+ Y PE + ++ P D++ G ++ E+ T + P + +
Sbjct: 184 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSP---IMQGNTEQHQLA 239
Query: 588 LVSSLIGDQDRVAELIDPEISANAEN 613
L+S L G I PE+ N +N
Sbjct: 240 LISQLCGS-------ITPEVWPNVDN 258
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 500 HGNLKSSNVLLSQDYVPLLGDFAFHPL---TNPNHVAQTMFAYISPEYIQ-----HQQLS 551
H ++K SN+LL + L DF + AY++PE I
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 552 PKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELV 589
++DV+ LGI ++E+ TG+FP + N K +V+ V
Sbjct: 208 IRADVWSLGISLVELATGQFPYK---NCKTDFEVLTKV 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 357 LSMINDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAM------ANGLTVVVKRIREMNQL 410
++ D K F +L+ + LG G G KA A TV VK ++E
Sbjct: 10 FKILEDPKWEFPRKNLV--LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 411 G--RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGIS-- 466
RD +E L ++ HP+++ + L++ EY GSL L + +
Sbjct: 68 SELRDLL-SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126
Query: 467 ---------HAELNWPTRLNIIKG--------VANGLSFIHSEFASYELPHGNLKSSNVL 509
+ L+ P + G ++ G+ ++ A +L H +L + N+L
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNIL 182
Query: 510 LSQDYVPLLGDFAFHP--LTNPNHVAQTM----FAYISPEYIQHQQLSPKSDVYCLGILI 563
+++ + DF ++V ++ +++ E + + +SDV+ G+L+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 564 LEVIT 568
E++T
Sbjct: 243 WEIVT 247
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 235 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 290
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP 183
L L+ N+ P S NL+NLT L L+ N S + P
Sbjct: 291 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP 326
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 477 NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF----AFHPLTN--PN 530
+++ + NGL +IH ++ H ++K++NVL+++D V L DF AF N PN
Sbjct: 129 RVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 531 HVAQTMFA--YISPE-YIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVE 587
+ Y PE + + P D++ G ++ E+ T + P + +
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSP---IMQGNTEQHQLA 240
Query: 588 LVSSLIGDQDRVAELIDPEISANAEN 613
L+S L G I PE+ N +N
Sbjct: 241 LISQLCGS-------ITPEVWPNVDN 259
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF----AFHPLTN--PNH 531
+++ + NGL +IH ++ H ++K++NVL+++D V L DF AF N PN
Sbjct: 130 VMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 532 VAQTMFA--YISPE-YIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVEL 588
+ Y PE + + P D++ G ++ E+ T + P + + L
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSP---IMQGNTEQHQLAL 241
Query: 589 VSSLIGDQDRVAELIDPEISANAEN 613
+S L G I PE+ N +N
Sbjct: 242 ISQLCGS-------ITPEVWPNVDN 259
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 477 NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDF----AFHPLTN--PN 530
+++ + NGL +IH ++ H ++K++NVL+++D V L DF AF N PN
Sbjct: 129 RVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 531 HVAQTMFA--YISPE-YIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVE 587
+ Y PE + + P D++ G ++ E+ T + P + +
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSP---IMQGNTEQHQLA 240
Query: 588 LVSSLIGDQDRVAELIDPEISANAEN 613
L+S L G I PE+ N +N
Sbjct: 241 LISQLCGS-------ITPEVWPNVDN 259
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR------EMNQLGRDTFDAEMRRLGRIKHPNILA 432
LG G G K + +G + VKRIR E +L D D MR + P +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMD-LDISMRT---VDCPFTVT 70
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRL--NIIKGVANGLSFIH 490
FR + + E M F K + P + I + L +H
Sbjct: 71 FYGALFREGDVWICMELMDTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQ 546
S+ + + H ++K SNVL++ + DF + VA+ + A Y++PE I
Sbjct: 127 SKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCKPYMAPERIN 182
Query: 547 ----HQQLSPKSDVYCLGILILEVITGKFP 572
+ S KSD++ LGI ++E+ +FP
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 125/332 (37%), Gaps = 69/332 (20%)
Query: 370 ADLMKAAAEV---LGNGGLGSSYKAA--MANGLTVVVKRIREMNQLGRDTFDAEMRRLGR 424
D++ A E+ LG G G + A G V VK ++ +++ +A +
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC----EAARSEIQV 64
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELN--WPTRLNIIKGV 482
++H N P + FR + L E+ ++F L G + N P RL+ I+ +
Sbjct: 65 LEHLNTTDPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 483 A----NGLSFIHSEFASYELPHGNLKSSNVLLSQ-DYVPLLG------------------ 519
A ++F+HS +L H +LK N+L Q DY
Sbjct: 124 AYQICKSVNFLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 520 DFAFHPLTNPNHVAQTMFA-YISPEYIQHQQLSPKSDVYCLGILILEVITG--KFPSQYL 576
DF + +H Y +PE I S DV+ +G +++E G FP+
Sbjct: 180 DFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH-- 237
Query: 577 SNAKGGIDVVELV-----SSLIGDQDRVAELIDPEISANAENSIGMMV------------ 619
++K + ++E + +I + + + +S G V
Sbjct: 238 -DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 620 -------QLLKIGLACTESEPAKRLDLEEALK 644
+L + E +PAKR+ L EALK
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALK 328
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 133 IPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGL 181
IP F+P L+++ L NN+ + PD+ L++L L L+GN + L
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 95
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 96 LTSIALQNNFFTGAIPE-FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKF 154
L I L NN + P+ F L +LN+L L N +E +P F + LQ L L+ NK
Sbjct: 58 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLLLNANKI 116
Query: 155 TGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQP 188
D+ +L NL L L+ N + T P
Sbjct: 117 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 286
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP 183
L L+ N+ P S NL+NLT L L+ N S + P
Sbjct: 287 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP 322
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 377 AEVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNIL 431
+G G G ++ + + V +K + R+ F E + + HP+I+
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
+ + ++ E G L L K L+ + + ++ L+++ S
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES 129
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQ 546
+ H ++ + NVL+S + LGDF + + +++PE I
Sbjct: 130 K----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 547 HQQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 133 IPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGL 181
IP F+P L+++ L NN+ + PD+ L++L L L+GN + L
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 95
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 96 LTSIALQNNFFTGAIPE-FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKF 154
L I L NN + P+ F L +LN+L L N +E +P F + LQ L L+ NK
Sbjct: 58 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLLLNANKI 116
Query: 155 TGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQP 188
D+ +L NL L L+ N + T P
Sbjct: 117 NXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 98/242 (40%), Gaps = 28/242 (11%)
Query: 356 DLSMINDDKDPFGLA-----DLMKAAAEV---LGNGGLGSSYKAAMAN----GLTVVVKR 403
D + I D++D + + ++ + E+ +G G G ++ + + V +K
Sbjct: 366 DYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT 425
Query: 404 IREMNQLG-RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGE 462
+ R+ F E + + HP+I+ + + ++ E G L L
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ-- 482
Query: 463 KGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA 522
+ L+ + + ++ L+++ S+ H ++ + NVL+S + LGDF
Sbjct: 483 --VRKFSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFG 536
Query: 523 FHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYL 576
+ + +++PE I ++ + SDV+ G+ + E++ G P Q +
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 577 SN 578
N
Sbjct: 597 KN 598
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 285
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP 183
L L+ N+ P S NL+NLT L L+ N S + P
Sbjct: 286 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP 321
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 86 DVEALRQIAGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
D+ L + LT + L NN + P + L L L L +N S P A +T L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP---LAGLTALT 286
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIP 183
L L+ N+ P S NL+NLT L L+ N S + P
Sbjct: 287 NLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP 322
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 77 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 131
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 132 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 184
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 97
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 98 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 148
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 149 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 89
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 90 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 140
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 141 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 91
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 92 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 142
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 143 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 84 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 138
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 139 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 191
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 88 EALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQ 145
+ + LT + L+ N + ++P F+ L L +S+NN E I DD F T LQ
Sbjct: 111 HVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNL-ERIEDDTFQATTSLQ 168
Query: 146 KLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNL 201
L L +N+ T ++L + L H N L+ P ++ LD S+N++
Sbjct: 169 NLQLSSNRLTH------VDLSLIPSL-FHANVSYNLLSTLAIPIAVEELDASHNSI 217
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 131 EEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT- 189
EEI FA +QKL++ N P N+ LT L L N S L T
Sbjct: 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 141
Query: 190 SIVSLDFSNNNLE 202
+ +L SNNNLE
Sbjct: 142 KLTTLSMSNNNLE 154
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 427 HPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
HP L L F+ + +L V EY+ G L+F + ++ + + + ++
Sbjct: 69 HP-FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISLA 122
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA-----FHPLTNPNHVAQTMFAYI 540
L+++H Y +LK NVLL + L D+ P + T YI
Sbjct: 123 LNYLHERGIIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-NYI 177
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+PE ++ + D + LG+L+ E++ G+ P
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 112 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 166
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 167 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 219
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 427 HPNILAPLAYHFRRDEKLV-VSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANG 485
HP L L F+ + +L V EY+ G L+F + ++ + + + ++
Sbjct: 65 HP-FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-----AEISLA 118
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA-----FHPLTNPNHVAQTMFAYI 540
L+++H Y +LK NVLL + L D+ P + T YI
Sbjct: 119 LNYLHERGIIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP-NYI 173
Query: 541 SPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+PE ++ + D + LG+L+ E++ G+ P
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 89
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 90 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 140
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 141 HSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 89
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 90 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 140
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 141 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 89
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 90 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 140
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 141 HSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN+ T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NN L E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGL 167
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 425 IKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLL--HGEKGISHAELNWPTRLNIIKGV 482
+KHP+I+ L + +V E+M L F + + G ++E + ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE---AVASHYMRQI 139
Query: 483 ANGLSFIHSEFASYELPHGNLKSSNVLLS--QDYVPL-LGDFAFH-PLTNPNHVAQTMFA 538
L + H + H ++K NVLL+ ++ P+ LGDF L VA
Sbjct: 140 LEALRYCHDN----NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVG 195
Query: 539 ---YISPEYIQHQQLSPKSDVYCLGILILEVITGKFPSQYLSNAKGGIDVVELVSSLIGD 595
+++PE ++ + DV+ G+++ +++G P Y + + L +I
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YGTKER-------LFEGIIKG 247
Query: 596 QDRVAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEAL 643
+ ++ IS +A++ + M+ L +PA+R+ + EAL
Sbjct: 248 KYKMNPRQWSHISESAKDLVRRMLML----------DPAERITVYEAL 285
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 390 KAAMANGLTVVVKRIREMN-------QLGRDTFDAEMRR-----LGRIKHPNILAPLAYH 437
++ + G T +V R ++ ++ + T D ++ R L R+ HPNI+ L
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIK-LKEI 116
Query: 438 FRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFASYE 497
F ++ + + G LF EKG ++E + + +K + ++++H
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGY-YSERD---AADAVKQILEAVAYLHEN----G 168
Query: 498 LPHGNLKSSNVLLSQDY--VPL-LGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQQLS 551
+ H +LK N+L + PL + DF + + +T+ Y +PE ++
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYG 228
Query: 552 PKSDVYCLGILILEVITGKFP 572
P+ D++ +GI+ ++ G P
Sbjct: 229 PEVDMWSVGIITYILLCGFEP 249
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN+ T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NN L E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGL 167
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN+ T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NN L E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGL 167
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN+ T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NN L E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGL 167
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 380 LGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDA----EMRRLGRIKHPNIL---- 431
+G G G A + L V IR+++ T+ E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 432 ---APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
AP + + +V + M L+ L + +S+ + + + + GL +
Sbjct: 93 IIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YIS 541
IHS + H +LK SN+LL+ + DF + +P+H Y +
Sbjct: 144 IHSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 542 PEYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
PE + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 89
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 90 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 140
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 141 HSA----NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 40/245 (16%)
Query: 357 LSMINDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAM------ANGLTVVVKRIREMNQL 410
++ D K F +L+ + LG G G KA A TV VK ++E
Sbjct: 10 FKILEDPKWEFPRKNLV--LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 411 G--RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGIS-- 466
RD +E L ++ HP+++ + L++ EY GSL L + +
Sbjct: 68 SELRDLL-SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126
Query: 467 ---------HAELNWPTRLNIIKG--------VANGLSFIHSEFASYELPHGNLKSSNVL 509
+ L+ P + G ++ G+ ++ A +L H +L + N+L
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNIL 182
Query: 510 LSQDYVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYIQHQQL-----SPKSDVYCLGILI 563
+++ + DF + + + I +++ + L + +SDV+ G+L+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 564 LEVIT 568
E++T
Sbjct: 243 WEIVT 247
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 109
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 110 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 160
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 161 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+P G + L G HA
Sbjct: 84 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---- 138
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 139 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 191
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 93
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 94 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 144
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 145 HSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 97/242 (40%), Gaps = 28/242 (11%)
Query: 356 DLSMINDDKDPFGLA-----DLMKAAAEV---LGNGGLGSSYKAAMAN----GLTVVVKR 403
D + I D++D + + ++ + E+ +G G G ++ + + V +K
Sbjct: 366 DYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT 425
Query: 404 IREMNQLG-RDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGE 462
+ R+ F E + + HP+I+ + + ++ E G L L
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ-- 482
Query: 463 KGISHAELNWPTRLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFA 522
+ L+ + + ++ L+++ S+ H ++ + NVL+S LGDF
Sbjct: 483 --VRKFSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSATDCVKLGDFG 536
Query: 523 FHPLTNPNHVAQTM-----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT-GKFPSQYL 576
+ + +++PE I ++ + SDV+ G+ + E++ G P Q +
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 577 SN 578
N
Sbjct: 597 KN 598
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 94
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 95 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 145
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 146 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 95
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 96 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 146
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 147 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 86
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 87 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 137
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 138 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 93
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 94 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 144
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 145 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 76/322 (23%)
Query: 378 EVLGNGGLG--SSYKAAMANGLTVVVKRIREMNQLGRDTFDA---------EMRRLGRIK 426
E +GNG G SS + + G V +K+I + FD E++ L K
Sbjct: 61 ETIGNGAYGVVSSARRRL-TGQQVAIKKIP-------NAFDVVTNAKRTLRELKILKHFK 112
Query: 427 HPNILA------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
H NI+A P + VV + M + L ++H + ++ + + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-----FLY 166
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHP--LTNPNHVAQTMFA 538
+ GL ++HS ++ H +LK SN+L++++ +GDF T+P M
Sbjct: 167 QLLRGLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 539 YISPEYIQHQQL-------SPKSDVYCLGILILEVITGK--------------------F 571
Y++ + + +L + D++ +G + E++ +
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 282
Query: 572 PSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTES 631
PS + A G V + SL Q E + P A + +G M++
Sbjct: 283 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF---------- 332
Query: 632 EPAKRLDLEEALK--MIEEIHD 651
EP+ R+ AL+ + + HD
Sbjct: 333 EPSARISAAAALRHPFLAKYHD 354
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIREM-NQLGRDTFDAEMRRLGRIKHPNIL------ 431
+G G G A N + V +K+I +Q E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 432 -APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIH 490
AP + + +V + M L+ L + +S+ + + + + GL +IH
Sbjct: 95 RAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYIH 145
Query: 491 SEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISPE 543
S + H +LK SN+LL+ + DF + +P+H Y +PE
Sbjct: 146 SA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 544 YIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
+ + + KS D++ +G ++ E+++ + FP ++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 87
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 88 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 138
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 139 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDTFDAEM--RRLGRIKHPNILAPLA 435
VLG GG G + M A G K++ + R + M +++ H + LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 436 YHFRRDEKL-VVSEYMPKGSLLFLLHG--EKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F L +V M G + + ++ E E P + + +GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQR 308
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y +LK NVLL D + D +A +++PE + +
Sbjct: 309 NIIYR----DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+ D + LG+ + E+I + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDTFDAEM--RRLGRIKHPNILAPLA 435
VLG GG G + M A G K++ + R + M +++ H + LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 436 YHFRRDEKL-VVSEYMPKGSLLFLLHG--EKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F L +V M G + + ++ E E P + + +GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQR 308
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y +LK NVLL D + D +A +++PE + +
Sbjct: 309 NIIYR----DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+ D + LG+ + E+I + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 87
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 88 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 138
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 139 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDTFDAEM--RRLGRIKHPNILAPLA 435
VLG GG G + M A G K++ + R + M +++ H + LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 436 YHFRRDEKL-VVSEYMPKGSLLFLLHG--EKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F L +V M G + + ++ E E P + + +GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQR 308
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y +LK NVLL D + D +A +++PE + +
Sbjct: 309 NIIYR----DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+ D + LG+ + E+I + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 83/212 (39%), Gaps = 20/212 (9%)
Query: 378 EVLGNGGLGSSYKAAMAN----GLTVVVKRIREMNQLG-RDTFDAEMRRLGRIKHPNILA 432
+G G G ++ + + V +K + R+ F E + + HP+I+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 433 PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
+ + ++ E G L L K L+ + + ++ L+++ S+
Sbjct: 76 LIGV-ITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESK 130
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-----FAYISPEYIQH 547
H ++ + NVL+S LGDF + + +++PE I
Sbjct: 131 ----RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 548 QQLSPKSDVYCLGILILEVIT-GKFPSQYLSN 578
++ + SDV+ G+ + E++ G P Q + N
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR----------EMNQLGRDTFDAEMRRLGRIKHP 428
LG+G G + A VVVK I+ E +LG+ T E+ L R++H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EIAILSRVEHA 89
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
NI+ L + +V E G LF H L+ P I + + + + +
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGY 145
Query: 489 IHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM---FAYISPEYI 545
+ + ++ H ++K N+++++D+ L DF + T Y +PE +
Sbjct: 146 LRLK----DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 546 Q-HQQLSPKSDVYCLGILILEVITGKFP 572
+ P+ +++ LG+ + ++ + P
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 92 QIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWL 149
++ L +AL N ++P+ F+KL L L L N + +PD F +T LQ +WL
Sbjct: 98 KLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWL 155
Query: 150 DNNKFTGKIP 159
+N + P
Sbjct: 156 HDNPWDCTCP 165
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 55/219 (25%)
Query: 403 RIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAYHFRRDEKLV--VSEYMPKGSLLFLLH 460
+IR++N + E+R + ++ HPNI Y DE+ + V E G LL L+
Sbjct: 63 KIRQINPKDVERIKTEVRLMKKLHHPNI--ARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
Query: 461 -------------------------GEKGIS------HAELNWPTR----LNIIKGVANG 485
E+ I+ L++ R NI++ + +
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLS--QDYVPLLGDFA----FHPLTNPNHVAQTMFA- 538
L ++H++ + H ++K N L S + + L DF F+ L N + T A
Sbjct: 181 LHYLHNQ----GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 539 ---YISPEYIQ--HQQLSPKSDVYCLGILILEVITGKFP 572
+++PE + ++ PK D + G+L+ ++ G P
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 379 VLGNGGLGSSYKAAM-ANGLTVVVKRIREMNQLGRDTFDAEM--RRLGRIKHPNILAPLA 435
VLG GG G + M A G K++ + R + M +++ H + LA
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 436 YHFRRDEKL-VVSEYMPKGSLLFLLHG--EKGISHAELNWPTRLNIIKGVANGLSFIHSE 492
Y F L +V M G + + ++ E E P + + +GL +H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQR 308
Query: 493 FASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA----YISPEYIQHQ 548
Y +LK NVLL D + D +A +++PE + +
Sbjct: 309 NIIYR----DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
+ D + LG+ + E+I + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 93
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 94 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 144
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 145 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 89/225 (39%), Gaps = 38/225 (16%)
Query: 377 AEVLGNGGLGSSYKAAM------ANGLTVVVKRIREMNQLG--RDTFDAEMRRLGRIKHP 428
+ LG G G KA A TV VK ++E RD +E L ++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL-SEFNVLKQVNHP 86
Query: 429 NILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGIS-----------HAELNWPTRLN 477
+++ + L++ EY GSL L + + + L+ P
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 478 IIKG--------VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTN 528
+ G ++ G+ ++ A L H +L + N+L+++ + DF +
Sbjct: 147 LTMGDLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 529 PNHVAQTMFAYISPEYIQHQQL-----SPKSDVYCLGILILEVIT 568
+ + I +++ + L + +SDV+ G+L+ E++T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 94
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 95 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKYI 145
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 146 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 20/217 (9%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRL 422
DK F D + A LG G GS + + I+ + Q EM R
Sbjct: 327 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 386
Query: 423 GRIKH----PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNI 478
+I H P I+ + + + ++V E G L L G++ E+ +
Sbjct: 387 AQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAEL 441
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-- 536
+ V+ G+ ++ + H NL + NVLL + + DF + T
Sbjct: 442 LHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+ +PE I ++ S +SDV+ G+ + E ++
Sbjct: 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NNNL E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NNNL E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NNNL E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 101 LQNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L NN + L AL L ++SN + +PD F +T LQ +WL +N + P
Sbjct: 457 LHNNRIMSIPKDVTHLQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 76 LQNMSLSGTIDVEALRQIAGLTSIALQNNFFTG-AIPEFNKLGALNALYLSSNNFSEEIP 134
LQ++ L G + + LT + + N T + LG L LYL N + +P
Sbjct: 89 LQSLPLLG-------QTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL-KTLP 140
Query: 135 DDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLHGNGF 178
P L+KL L NN T ++P L+N L+NL L L N
Sbjct: 141 PGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NN+L E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGL 167
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 380 LGNGGLGSSYKAA-MANGLTVVVKRIR--EMNQLGRDTFDAEMRRLGRIKHPNIL----- 431
+G G G A N + V +K+I E + T E++ L R +H NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDI 93
Query: 432 --APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
AP + + +V + M L+ L + +S+ + + + + GL +I
Sbjct: 94 IRAPTIEQMK--DVYIVQDLMETD--LYKLLKCQHLSNDHICY-----FLYQILRGLKYI 144
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-------YISP 542
HS + H +LK SN+LL+ + DF + +P+H Y +P
Sbjct: 145 HSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 543 EYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
E + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN T ++P L+N L+NL L L
Sbjct: 123 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180
Query: 175 GNGF 178
N
Sbjct: 181 ENSL 184
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NNNL E+P GL
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 116 LGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLH 174
LG L LYL N + +P P L+KL L NN T ++P L+N L+NL L L
Sbjct: 124 LGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 181
Query: 175 GNGF 178
N
Sbjct: 182 ENSL 185
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 152 NKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQPT-SIVSLDFSNNNLEGEIPKGL 209
N+ T +L L L EL+L GN L P + PT + L +NNNL E+P GL
Sbjct: 111 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 168
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 76/322 (23%)
Query: 378 EVLGNGGLG--SSYKAAMANGLTVVVKRIREMNQLGRDTFDA---------EMRRLGRIK 426
E +GNG G SS + + G V +K+I + FD E++ L K
Sbjct: 60 ETIGNGAYGVVSSARRRL-TGQQVAIKKIP-------NAFDVVTNAKRTLRELKILKHFK 111
Query: 427 HPNILA------PLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIK 480
H NI+A P + VV + M + L ++H + ++ + + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-----FLY 165
Query: 481 GVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHP--LTNPNHVAQTMFA 538
+ GL ++HS ++ H +LK SN+L++++ +GDF T+P M
Sbjct: 166 QLLRGLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 539 YISPEYIQHQQL-------SPKSDVYCLGILILEVITGK--------------------F 571
Y++ + + +L + D++ +G + E++ +
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 281
Query: 572 PSQYLSNAKGGIDVVELVSSLIGDQDRVAELIDPEISANAENSIGMMVQLLKIGLACTES 631
PS + A G V + SL Q E + P A + +G M++
Sbjct: 282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF---------- 331
Query: 632 EPAKRLDLEEALK--MIEEIHD 651
EP+ R+ AL+ + + HD
Sbjct: 332 EPSARISAAAALRHPFLAKYHD 353
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 83/217 (38%), Gaps = 20/217 (9%)
Query: 363 DKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGLTVVVKRIREMNQLGRDTFDAEMRRL 422
DK F D + A LG G GS + + I+ + Q EM R
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 60
Query: 423 GRIKH----PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNI 478
+I H P I+ + + + ++V E G L L G++ E+ +
Sbjct: 61 AQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAEL 115
Query: 479 IKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM-- 536
+ V+ G+ ++ + H +L + NVLL + + DF + T
Sbjct: 116 LHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171
Query: 537 -----FAYISPEYIQHQQLSPKSDVYCLGILILEVIT 568
+ +PE I ++ S +SDV+ G+ + E ++
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 21/204 (10%)
Query: 378 EVLGNGGLGSSYKAAMA-NGLTVVVKRIREMNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
EVLG+G + G +K I++ + + E+ L +IKH NI+
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 437 HFRRDEKLVVSEYMPKGSLL--FLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHSEFA 494
+ +V + + G L L G A L +I+ V + + ++H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHEN-- 125
Query: 495 SYELPHGNLKSSNVLL---SQDYVPLLGDFAFHPLTNPNHVAQTMFA---YISPEYIQHQ 548
+ H +LK N+L ++ ++ DF + N + T Y++PE + +
Sbjct: 126 --GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEVLAQK 182
Query: 549 QLSPKSDVYCLGILILEVITGKFP 572
S D + +G++ ++ G P
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 42/299 (14%)
Query: 380 LGNGGLGSSYKAAMA-NGLTVVVKRIRE--MNQLGRDTFDAEMRRLGRIKHPNILAPLAY 436
+G+G G+ A G V +K++ ++L E+R L ++H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 437 HFRRDEKL-------VVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFI 489
F DE L +V +M + H + G + ++ + GL +I
Sbjct: 93 -FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYI 144
Query: 490 HSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA-YISPEYI-QH 547
H+ + H +LK N+ +++D + DF + + Y +PE I
Sbjct: 145 HAA----GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNW 200
Query: 548 QQLSPKSDVYCLGILILEVITGKF---PSQYLSNAKGGIDVV-----ELVSSLIGDQDR- 598
+ + D++ +G ++ E+ITGK S +L K + V E V L D+ +
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 599 ----VAELIDPEISANAENSIGMMVQLLKIGLACTESEPAKRLDLEEALK--MIEEIHD 651
+ EL + ++ N+ + V LL+ L + +R+ EAL E +HD
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVL---DAEQRVTAGEALAHPYFESLHD 316
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA--- 538
+ GL +IHS + H +LK SN+LL+ + DF + +P+H
Sbjct: 135 ILRGLKYIHSA----NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 539 ----YISPEYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
Y +PE + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA--- 538
+ GL +IHS + H +LK SN+LL+ + DF + +P+H
Sbjct: 135 ILRGLKYIHSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 539 ----YISPEYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
Y +PE + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 97 TSIALQNNFFTGAIPE-FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFT 155
T + LQNN + + F L L AL L +N S+ I + F+P+ LQKL++ N
Sbjct: 57 TLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IHEKAFSPLRKLQKLYISKNHLV 115
Query: 156 GKIPDSLMNLQNLTELHLHGN 176
+IP +L + +L EL +H N
Sbjct: 116 -EIPPNLPS--SLVELRIHDN 133
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 78 NMSLSGTIDVEALRQIAGLTSIALQNNFFTGAIP-EFNKLGALNALYLSSNNFSEEIPDD 136
N+ + D+ L + GL + + N F P F+ L +L L++ ++ S I +
Sbjct: 202 NLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERN 260
Query: 137 FFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELHLHGNGFS 179
F + L +L L +N + D L+ L ELHLH N ++
Sbjct: 261 AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 85 IDVEALRQIAGLTSIAL-QNNFFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTP 143
I + R + L + L +N+ + FN L +LN L L +N+ IP F ++
Sbjct: 90 IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF-DNWLTVIPSGAFEYLSK 148
Query: 144 LQKLWLDNN 152
L++LWL NN
Sbjct: 149 LRELWLRNN 157
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 92 EKRILQAVNFP-FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 109 AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
+P+ + L L L +S N + +PD F +T LQK+WL N + P
Sbjct: 465 TLPDASLLPMLLVLKISRNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 116 LGALNALYLSSNNFSEE-IPDDFFAPMTP-LQKLWLDNNKFTG--KIPDSLMNLQNLTEL 171
L +L L LS N EE + + P LQ L L N K ++L+ L+NLT +
Sbjct: 333 LKSLEYLDLSENLMVEEYLKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLKNLTNI 392
Query: 172 HLHGNGFSGLIPETIQ-PTSIVSLDFSNNNLE---GEIPKGL 209
+ N F + PET Q P + L+ S+ + G IPK L
Sbjct: 393 DISKNSFHSM-PETCQWPEKMKYLNLSSTRIHSVTGCIPKTL 433
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 15/147 (10%)
Query: 430 ILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPTRLNIIKGVANGL 486
L L + F+ + L +V EY P G + L G HA +
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVAQTMFAYISPEYI 545
++HS +L + +LK N+L+ Q + DF F + Y++PE I
Sbjct: 156 EYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 546 QHQQLSPKSDVYCLGILILEVITGKFP 572
+ + D + LG+LI E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 112 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 166
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 167 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL 219
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPN--HV 532
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 533 AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
A T Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 AGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
N++ L L S N + +PD F +T LQK+WL N + P
Sbjct: 273 LNQISGLLELEFSRNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
H N+L + + D +V E M GS+L +H + + E + +++ VA+ L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQ----------DY-----VPLLGDFAFHPLTNPNH 531
F+H++ + H +LK N+L D+ + L GD + P++ P
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS--PISTPEL 178
Query: 532 VAQTMFA-YISPEYIQ--HQQLS---PKSDVYCLGILILEVITGKFP 572
+ A Y++PE ++ ++ S + D++ LG+++ +++G P
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 427 HPNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGL 486
H N+L + + D +V E M GS+L +H + + E + +++ VA+ L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 487 SFIHSEFASYELPHGNLKSSNVLLSQ----------DY-----VPLLGDFAFHPLTNPNH 531
F+H++ + H +LK N+L D+ + L GD + P++ P
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS--PISTPEL 178
Query: 532 VAQTMFA-YISPEYIQ--HQQLS---PKSDVYCLGILILEVITGKFP 572
+ A Y++PE ++ ++ S + D++ LG+++ +++G P
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 379 VLGNGGLGSSYKA-AMANGLTVVVKRIREMNQLGRD------TFDAEMRRLGRIK----H 427
+LG GG G+ + + + L V +K I LG T E+ L ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 428 PNILAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLS 487
P ++ L + ++ ++V E LF EKG P+R + VA +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEG---PSRCFFGQVVA-AIQ 153
Query: 488 FIHSEFASYELPHGNLKSSNVLLS-QDYVPLLGDFAFHPLTN--PNHVAQTMFAYISPEY 544
HS H ++K N+L+ + L DF L + P Y PE+
Sbjct: 154 HCHSRGVV----HRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEW 209
Query: 545 I-QHQQLSPKSDVYCLGILILEVITGKFP 572
I +HQ + + V+ LGIL+ +++ G P
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIP 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 482 VANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMFA--- 538
+ GL +IHS + H +LK SN+L++ + DF + +P H
Sbjct: 153 ILRGLKYIHSA----NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 539 ----YISPEYIQHQQLSPKS-DVYCLGILILEVITGK--FPSQY 575
Y +PE + + + KS D++ +G ++ E+++ + FP ++
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 52 PISNPCTDKWQGVMCINGVVSS-----------LFLQNMSLSGTIDVEALRQIAGLTSIA 100
P + C+++ V+C ++ L LQ S+ I + + + L +
Sbjct: 7 PAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQ-VIRTDTFKHLRHLEILQ 65
Query: 101 LQNNFFTG-AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNN 152
L N + FN L +LN L L N + +P F ++ L++LWL NN
Sbjct: 66 LSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-VPTQAFEYLSKLRELWLRNN 117
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 76 LQNMSLSGT-IDVEALRQIAGLTSIA----LQNNFFTGAIPEFNKLGALNALYLSSNNFS 130
L+ + LSG +D+ GLTS+ + T F+ L +L L LS NN
Sbjct: 180 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 239
Query: 131 EEIPDDFFAPMTPLQKLWLDNNKF 154
+P D F P+ L+++ L++N +
Sbjct: 240 S-LPHDLFTPLHRLERVHLNHNPW 262
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 92 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 146
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 147 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVV-VKRIR-----EMNQLGRDTFDAEMRRLGRIKHPNIL 431
+ LG G + YKA N +V +K+I+ E T E++ L + HPNI+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 432 APLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSFIHS 491
L + +V ++M + + ++ + + + + GL ++H
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQ 130
Query: 492 EFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPN----HVAQTMFAYISPEYIQ 546
+ + H +LK +N+LL ++ V L DF +PN H T + Y +PE +
Sbjct: 131 HW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-YRAPELLF 185
Query: 547 HQQL-SPKSDVYCLGILILEVI 567
++ D++ +G ++ E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 476 LNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPL----LGDFAF-HPLTNPN 530
+ +IK + G+ ++H + H +LK N+LLS Y PL + DF + +
Sbjct: 134 IRLIKQILEGVYYLHQN----NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIGHAC 188
Query: 531 HVAQTMFA--YISPEYIQHQQLSPKSDVYCLGILILEVITGKFP-------SQYLSNAKG 581
+ + M Y++PE + + ++ +D++ +GI+ ++T P YL+ ++
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
Query: 582 GIDVVE----LVSSLIGDQDRVAELIDPEISANAE 612
+D E VS L D + + +PE AE
Sbjct: 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 109 AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
+P+ + L + ++SN + +PD F +T LQK+WL N + P
Sbjct: 491 TLPDASLFPVLLVMKIASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 540
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 101 LQNNFFTGAIPEFNKLGALNALYLSSNNF-SEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L+N+ GA P +L L LS N+ S + + + L L + N F +P
Sbjct: 377 LKNSACKGAWP------SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMP 429
Query: 160 DSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNLEG 203
DS + + L+L G + +T P ++ LD SNNNL+
Sbjct: 430 DSCQWPEKMRFLNLSSTGIR--VVKTCIPQTLEVLDVSNNNLDS 471
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 52 PISNPCTDKWQGVMCINGVVSS-----------LFLQNMSLSGTIDVEALRQIAGLTSIA 100
P + C+++ V+C ++ L LQ S+ I + + + L +
Sbjct: 7 PAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQ-VIRTDTFKHLRHLEILQ 65
Query: 101 LQNNFFTG-AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNN 152
L N + FN L +LN L L N + +P F ++ L++LWL NN
Sbjct: 66 LSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-VPTQAFEYLSKLRELWLRNN 117
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 76 LQNMSLSGT-IDVEALRQIAGLTSIA----LQNNFFTGAIPEFNKLGALNALYLSSNNFS 130
L+ + LSG +D+ GLTS+ + T F+ L +L L LS NN
Sbjct: 180 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 239
Query: 131 EEIPDDFFAPMTPLQKLWLDNNKF 154
+P D F P+ L+++ L++N +
Sbjct: 240 S-LPHDLFTPLHRLERVHLNHNPW 262
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 74 LFLQNMSLSGTIDVEALRQIAGLTSIALQ-NNFFTGAIPEFNKLGALNALYLSSNNFSEE 132
L LQ+ L+ T+ R + LT + L N T + F+ L L L L++N +
Sbjct: 40 LDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS- 97
Query: 133 IPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLHGNGFSGLIPETIQP-TS 190
+P F +T L KL+L N+ +P + + L L EL L+ N + T+
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 191 IVSLDFSNNNLEGEIPKG 208
+ +L S N L+ +P G
Sbjct: 157 LQTLSLSTNQLQ-SVPHG 173
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 112 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---- 166
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 167 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 219
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 74 LFLQNMSLSGTIDVEALRQIAGLTSIALQ-NNFFTGAIPEFNKLGALNALYLSSNNFSEE 132
L LQ+ L+ T+ R + LT + L N T + F+ L L L L++N +
Sbjct: 40 LDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS- 97
Query: 133 IPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLHGNGFSGLIPETIQP-TS 190
+P F +T L KL+L N+ +P + + L L EL L+ N + T+
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 191 IVSLDFSNNNLEGEIPKG 208
+ +L S N L+ +P G
Sbjct: 157 LQTLSLSTNQLQ-SVPHG 173
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP----DSLMNLQNL 168
F++L L L L++N + IP F +T LQ L L N+ +P D L LQ +
Sbjct: 127 FDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTI 184
Query: 169 TELHLHGNGFSGLIPETI 186
T L GN F ET+
Sbjct: 185 T---LFGNQFDCSRCETL 199
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 83 GTIDVEALRQIAGLTSIALQNNFFTG-AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPM 141
G+ID + L + L N F L L L L +N + +PD F +
Sbjct: 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL-KSVPDGIFDRL 394
Query: 142 TPLQKLWLDNNKFTGKIP 159
T LQK+WL N + P
Sbjct: 395 TSLQKIWLHTNPWDCSCP 412
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 69/201 (34%), Gaps = 49/201 (24%)
Query: 71 VSSLFLQNMSLSGTIDVE--ALRQIAGLTSIALQNNFFTGAIPE---FNKLGALNALYLS 125
+SSL + + + + +E A +A L + L GA+ F L +L L L
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 126 SNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQ------------------- 166
NN + P FF M L L NK + L+N Q
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197
Query: 167 ---------------NLTELHLHGNGFSGLIP----ETIQPTSIVSLDFSNNNLEGEIPK 207
++T L L GNGF + + I T I SL SN+ G
Sbjct: 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG---- 253
Query: 208 GLSKFGPKPFADNDKLCGKPL 228
S FG F D D K L
Sbjct: 254 --SSFGHTNFKDPDNFTFKGL 272
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 85 IDVEALRQIAGLTSIALQNNFFTGAIPE--FNKLGALNALYLSSNNFSEEIPDDFFAPMT 142
ID A + L + L NF G+I F L L L LS N+ + D F +
Sbjct: 314 IDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLGLP 371
Query: 143 PLQKLWLDNNKFTGKIPDSLMN-LQNLTELHLHGNGFSGLIPE 184
L++L LD N+ +PD + + L +L ++ LH N + P
Sbjct: 372 NLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 413
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 86 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---- 140
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 141 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 193
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
F L L L L +N + +PD F +T LQK+WL N + P
Sbjct: 319 FWGLTHLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 364
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 69/201 (34%), Gaps = 49/201 (24%)
Query: 71 VSSLFLQNMSLSGTIDVE--ALRQIAGLTSIALQNNFFTGAIPE---FNKLGALNALYLS 125
+SSL + + + + +E A +A L + L GA+ F L +L L L
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 126 SNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQ------------------- 166
NN + P FF M L L NK + L+N Q
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197
Query: 167 ---------------NLTELHLHGNGFSGLIP----ETIQPTSIVSLDFSNNNLEGEIPK 207
++T L L GNGF + + I T I SL SN+ G
Sbjct: 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG---- 253
Query: 208 GLSKFGPKPFADNDKLCGKPL 228
S FG F D D K L
Sbjct: 254 --SSFGHTNFKDPDNFTFKGL 272
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMN-LQNLTEL 171
F+ L L L+ N ++ I D+ F +T L++L LD N+ +PD + + L +L ++
Sbjct: 295 FSHFTDLEQLTLAQNEINK-IDDNAFWGLTHLKELALDTNQLKS-VPDGIFDRLTSLQKI 352
Query: 172 HLHGNGFSGLIPE 184
LH N + P
Sbjct: 353 WLHTNPWDCSCPR 365
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 109 AIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
+P+ + L + +S N + +PD F +T LQK+WL N + P
Sbjct: 465 TLPDASLFPVLLVMKISRNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 101 LQNNFFTGAIPEFNKLGALNALYLSSNNF-SEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L+N+ GA P +L L LS N+ S + + + L L + N F +P
Sbjct: 351 LKNSACKGAWP------SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMP 403
Query: 160 DSLMNLQNLTELHLHGNGFSGLIPETIQPTSIVSLDFSNNNLEG 203
DS + + L+L G + +T P ++ LD SNNNL+
Sbjct: 404 DSCQWPEKMRFLNLSSTGIR--VVKTCIPQTLEVLDVSNNNLDS 445
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY P G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+++ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4H7X|A Chain A, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
pdb|4H7X|B Chain B, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
pdb|4H7Y|A Chain A, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
pdb|4H7Y|B Chain B, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
pdb|4H7Y|C Chain C, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
pdb|4H7Y|D Chain D, Crystal Structure Of The Tetratricopeptide Repeat (Tpr)
Motif Of Human Dual Specificity Protein Kinase Mps1
Length = 161
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLSQ 512
+F+H FA +EL GN+K S LL +
Sbjct: 93 FAFVHISFAQFELSQGNVKKSKQLLQK 119
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 91 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 145
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ Q + DF F +
Sbjct: 146 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI ++ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 31/211 (14%)
Query: 378 EVLGNGGLGSSYKAAMANGLTVVVKRIREMNQL-GRD--TFDAEMRRLGRIKHPNI---- 430
E LG G + +I +L RD + E R +KHPNI
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 431 --LAPLAYHFRRDEKLVVSEYMPKGSLLFLLHGEKGISHAELNWPTRLNIIKGVANGLSF 488
++ +H+ +V + + G L + + S A+ + + I + ++
Sbjct: 97 DSISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADAS-----HCIHQILESVNH 145
Query: 489 IHSEFASYELPHGNLKSSNVLLS---QDYVPLLGDFAFHPLTNPNHVAQTMFA----YIS 541
IH +++ H +LK N+LL+ + L DF A FA Y+S
Sbjct: 146 IHQ----HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 542 PEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
PE ++ D++ G+++ ++ G P
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 119 LNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L L L +N + +PD F +T LQK+WL N + P
Sbjct: 203 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 242
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 74 LFLQNMSLSGTIDVEALRQI-AGLTSIALQNNFFTGAIPEFNKLGALNALYLSSNNFSE- 131
+F+ +LSG ++ L I G++SI IP N+ L +LYL SN+ S
Sbjct: 94 IFMAETALSGPKALKHLFFIQTGISSIDF--------IPLHNQ-KTLESLYLGSNHISSI 144
Query: 132 EIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLT--ELHLHGNGFSGLIPETIQPT 189
++P F P L+ L NN + + +LQ T L+L+GN +G+ P
Sbjct: 145 KLPKGF--PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSA 202
Query: 190 SIVSLDF 196
SL+F
Sbjct: 203 VFQSLNF 209
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 98 SIALQNN-FFTGAIPEFNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTG 156
SI LQ + FF + F+ L L L++ + SE +P ++ L+KL L NKF
Sbjct: 258 SINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVG-LSTLKKLVLSANKFEN 315
Query: 157 KIPDSLMNLQNLTELHLHGN 176
S N +LT L + GN
Sbjct: 316 LCQISASNFPSLTHLSIKGN 335
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 486 LSFIHSEFASYELPHGNLKSSNVLLS-----QDYVPLLG-DFAFHP-------LTNPNHV 532
L +IH E HG++K++N+LL Q Y+ G + + P NP
Sbjct: 164 LEYIHEN----EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKG 219
Query: 533 AQTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
+ S + + LS +SDV LG +L + GK P
Sbjct: 220 HNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 119 LNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L L L +N + +PD F +T LQK+WL N + P
Sbjct: 204 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 243
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 119 LNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L L L +N + +PD F +T LQK+WL N + P
Sbjct: 203 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 242
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 119 LNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L L L +N + +PD F +T LQK+WL N + P
Sbjct: 204 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 243
>pdb|2IY5|B Chain B, Phenylalanyl-Trna Synthetase From Thermus Thermophilus
Complexed With Trna And A Phenylalanyl-Adenylate Analog
Length = 785
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 132 EIPDDFFAPMTPLQKLWLD----NNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQ 187
E P+D P TPL + W + + + T PD+L L L LH G++ + PE
Sbjct: 134 EFPEDALPPGTPLSEAWPEEVVLDLEVTPNRPDAL-GLLGLAR-DLHALGYALVEPEAAL 191
Query: 188 PTSIVSLDFSNNNLEGEIPKGLSKF 212
+ L F+ L+ E P+G F
Sbjct: 192 KAEALPLPFA---LKVEDPEGAPHF 213
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 119 LNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIP 159
L L L +N + +PD F +T LQK+WL N + P
Sbjct: 202 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241
>pdb|1PYS|B Chain B, Phenylalanyl-Trna Synthetase From Thermus Thermophilus
pdb|1B7Y|B Chain B, Phenylalanyl Trna Synthetase Complexed With
Phenylalaninyl-Adenylate
pdb|1EIY|B Chain B, The Crystal Structure Of Phenylalanyl-Trna Synthetase From
Thermus Thermophilus Complexed With Cognate Trnaphe
pdb|1B70|B Chain B, Phenylalanyl Trna Synthetase Complexed With Phenylalanine
pdb|1JJC|B Chain B, Crystal Structure At 2.6a Resolution Of Phenylalanyl-trna
Synthetase Complexed With Phenylalanyl-adenylate In The
Presence Of Manganese
pdb|2AKW|B Chain B, Crystal Structure Of T.thermophilus Phenylalanyl-trna
Synthetase Complexed With P-cl-phenylalanine
pdb|2ALY|B Chain B, Crystal Structure Of T.Thermophilus Phenylalanyl-Trna
Synthetase Complexed With
5'-O-[n-(L-Tyrosyl)sulphamoyl]adenosine
pdb|2AMC|B Chain B, Crystal Structure Of Phenylalanyl-Trna Synthetase
Complexed With L- Tyrosine
pdb|3HFZ|B Chain B, Crystal Structure Of Thermus Thermophilus
Phenylalanyl-Trna Synthetase Comlexed With M-Tyrosine
pdb|3TEH|B Chain B, Crystal Structure Of Thermus Thermophilus
Phenylalanyl-Trna Synthetase Comlexed With L-Dopa
Length = 785
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 132 EIPDDFFAPMTPLQKLWLD----NNKFTGKIPDSLMNLQNLTELHLHGNGFSGLIPETIQ 187
E P+D P TPL + W + + + T PD+L L L LH G++ + PE
Sbjct: 134 EFPEDALPPGTPLSEAWPEEVVLDLEVTPNRPDAL-GLLGLAR-DLHALGYALVEPEAAL 191
Query: 188 PTSIVSLDFSNNNLEGEIPKGLSKF 212
+ L F+ L+ E P+G F
Sbjct: 192 KAEALPLPFA---LKVEDPEGAPHF 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 418 EMRRLGRIKHPNILAPLAYHFRRDEKL-VVSEYMPKGSLLFLLH--GEKGISHAELNWPT 474
E R L + P L L + F+ + L +V EY+ G + L G HA
Sbjct: 78 EKRILQAVNFP-FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---- 132
Query: 475 RLNIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAF-HPLTNPNHVA 533
+ ++HS +L + +LK N+L+ + + DF F +
Sbjct: 133 ---YAAQIVLTFEYLHS----LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL 185
Query: 534 QTMFAYISPEYIQHQQLSPKSDVYCLGILILEVITGKFP 572
Y++PE I + + D + LG+LI E+ G P
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3TLQ|A Chain A, Crystal Structure Of Eal-Like Domain Protein Ydiv
pdb|3TLQ|B Chain B, Crystal Structure Of Eal-Like Domain Protein Ydiv
Length = 242
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 360 INDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGL--TVVVKRIREMNQLGRDTFDA 417
+N+ KD GL L + VLGN G G+S A+ +GL V++ + Q+ +F+
Sbjct: 126 LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP 185
Query: 418 EMRRL 422
+R +
Sbjct: 186 FIRAI 190
>pdb|4ES4|A Chain A, Crystal Structure Of Ydiv And Flhd Complex
pdb|4ES4|C Chain C, Crystal Structure Of Ydiv And Flhd Complex
pdb|4ES4|E Chain E, Crystal Structure Of Ydiv And Flhd Complex
pdb|4ES4|G Chain G, Crystal Structure Of Ydiv And Flhd Complex
Length = 237
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 360 INDDKDPFGLADLMKAAAEVLGNGGLGSSYKAAMANGL--TVVVKRIREMNQLGRDTFDA 417
+N+ KD GL L + VLGN G G+S A+ +GL V++ + Q+ +F+
Sbjct: 121 LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP 180
Query: 418 EMRRL 422
+R +
Sbjct: 181 FIRAI 185
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 477 NIIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTM 536
I + L +HS+ + + H ++K SNVL++ DF + VA+ +
Sbjct: 140 KIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKXCDFGISGYLV-DDVAKDI 195
Query: 537 FA----YISPEYIQ----HQQLSPKSDVYCLGILILEVITGKFP 572
A Y +PE I + S KSD++ LGI +E+ +FP
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELH 172
FN L +L L ++ N+F E D F + L L L + P + +L +L L+
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205
Query: 173 LHGNGFSGL 181
+ N F L
Sbjct: 206 MSHNNFFSL 214
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELH 172
FN L +L L ++ N+F E D F + L L L + P + +L +L L+
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 173 LHGNGFSGL--IPETIQPTSIVSLDFSNNNLEGEIPKGLSKF 212
+ N F L P S+ LD+S N++ + L F
Sbjct: 501 MSHNNFFSLDTFPYKC-LNSLQVLDYSLNHIMTSKKQELQHF 541
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF 537
++ + GL +IHS + H +LK N+ +++D + DF H M
Sbjct: 149 LVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGL-----ARHADAEMT 199
Query: 538 AYI------SPEYI-QHQQLSPKSDVYCLGILILEVITGK 570
Y+ +PE I + D++ +G ++ E++TGK
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 113 FNKLGALNALYLSSNNFSEEIPDDFFAPMTPLQKLWLDNNKFTGKIPDSLMNLQNLTELH 172
FN L +L L ++ N+F E D F + L L L + P + +L +L L+
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 173 LHGNGFSGL--IPETIQPTSIVSLDFSNNNLEGEIPKGLSKF 212
+ N F L P S+ LD+S N++ + L F
Sbjct: 525 MSHNNFFSLDTFPYKCL-NSLQVLDYSLNHIMTSKKQELQHF 565
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 478 IIKGVANGLSFIHSEFASYELPHGNLKSSNVLLSQDYVPLLGDFAFHPLTNPNHVAQTMF 537
++ + GL +IHS + H +LK N+ +++D + DF H M
Sbjct: 131 LVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGL-----ARHADAEMT 181
Query: 538 AYI------SPEYI-QHQQLSPKSDVYCLGILILEVITGK 570
Y+ +PE I + D++ +G ++ E++TGK
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,115,269
Number of Sequences: 62578
Number of extensions: 680051
Number of successful extensions: 2962
Number of sequences better than 100.0: 853
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 612
Number of HSP's that attempted gapping in prelim test: 1979
Number of HSP's gapped (non-prelim): 946
length of query: 651
length of database: 14,973,337
effective HSP length: 105
effective length of query: 546
effective length of database: 8,402,647
effective search space: 4587845262
effective search space used: 4587845262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)