Query         006317
Match_columns 650
No_of_seqs    531 out of 3899
Neff          8.9 
Searched_HMMs 29240
Date          Mon Mar 25 21:47:14 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006317hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-54   4E-59  446.1  13.3  258  324-599    13-287 (299)
  2 3omv_A RAF proto-oncogene seri 100.0 7.9E-54 2.7E-58  440.1  19.4  263  324-604    36-303 (307)
  3 4gt4_A Tyrosine-protein kinase 100.0 5.2E-54 1.8E-58  443.2  17.0  256  325-598    27-303 (308)
  4 4aoj_A High affinity nerve gro 100.0 7.6E-54 2.6E-58  446.1  16.6  258  324-599    41-317 (329)
  5 4ase_A Vascular endothelial gr 100.0 1.5E-51 5.1E-56  432.3  14.0  269  313-598    53-344 (353)
  6 4fih_A Serine/threonine-protei 100.0   7E-51 2.4E-55  423.5  18.4  249  324-594    74-323 (346)
  7 4b9d_A Serine/threonine-protei 100.0 1.6E-51 5.4E-56  429.0  12.6  250  324-594    24-276 (350)
  8 3hmm_A TGF-beta receptor type- 100.0   1E-50 3.4E-55  419.2  17.9  265  324-598     3-294 (303)
  9 4g3f_A NF-kappa-beta-inducing  100.0 1.6E-50 5.3E-55  419.7  18.7  252  323-598    57-313 (336)
 10 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-50   5E-55  414.9  17.5  248  324-593    32-283 (311)
 11 3fpq_A Serine/threonine-protei 100.0   4E-50 1.4E-54  409.6  20.5  246  327-594    29-282 (290)
 12 4fie_A Serine/threonine-protei 100.0 1.1E-49 3.9E-54  424.4  19.8  248  323-594   150-400 (423)
 13 3hyh_A Carbon catabolite-derep 100.0 6.1E-49 2.1E-53  397.4  21.2  245  324-594    13-262 (275)
 14 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-49 1.2E-53  404.5  14.5  247  324-594    24-281 (304)
 15 4g31_A Eukaryotic translation  100.0 9.2E-49 3.2E-53  402.8  13.2  251  324-594     5-279 (299)
 16 2qkw_B Protein kinase; three-h 100.0 7.3E-46 2.5E-50  387.0  22.7  283  313-598    28-312 (321)
 17 3uim_A Brassinosteroid insensi 100.0 6.2E-45 2.1E-49  380.6  22.6  290  311-601    17-311 (326)
 18 4b99_A Mitogen-activated prote 100.0 3.6E-45 1.2E-49  390.4  20.0  263  323-595    53-345 (398)
 19 4f9c_A Cell division cycle 7-r 100.0 2.2E-44 7.4E-49  380.2  20.3  202  318-530    15-249 (361)
 20 3uto_A Twitchin; kinase, muscl 100.0 6.1E-44 2.1E-48  399.1  19.9  252  324-595   157-411 (573)
 21 3v5w_A G-protein coupled recep 100.0 1.1E-43 3.6E-48  395.0  21.0  248  324-594   189-449 (689)
 22 2nru_A Interleukin-1 receptor- 100.0 7.2E-43 2.5E-47  361.7  25.4  282  311-599    12-304 (307)
 23 3p86_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47  363.8  17.6  266  318-601    31-298 (309)
 24 3soc_A Activin receptor type-2 100.0 2.6E-43 8.8E-48  368.0  13.9  266  323-598    23-315 (322)
 25 3s95_A LIMK-1, LIM domain kina 100.0   3E-42   1E-46  357.7  20.9  259  323-599     9-280 (310)
 26 2psq_A Fibroblast growth facto 100.0 3.2E-42 1.1E-46  366.7  20.2  258  323-598    80-361 (370)
 27 3fxz_A Serine/threonine-protei 100.0   8E-42 2.7E-46  352.5  22.4  252  322-595    18-270 (297)
 28 4aw2_A Serine/threonine-protei 100.0 2.5E-42 8.4E-47  374.1  17.8  265  314-595    64-339 (437)
 29 2c30_A Serine/threonine-protei 100.0 2.6E-41 8.9E-46  352.6  23.4  261  313-595    24-295 (321)
 30 3poz_A Epidermal growth factor 100.0 3.5E-42 1.2E-46  360.1  16.5  255  323-598    14-275 (327)
 31 2qol_A Ephrin receptor; recept 100.0 2.5E-42 8.7E-47  367.7  15.4  256  323-598    44-306 (373)
 32 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-42 3.9E-47  371.2  12.1  257  322-598   112-371 (377)
 33 3kul_A Ephrin type-A receptor  100.0 3.1E-42 1.1E-46  360.3  15.1  257  323-599    48-311 (325)
 34 3vhe_A Vascular endothelial gr 100.0 8.1E-42 2.8E-46  361.8  18.2  270  312-598    10-352 (359)
 35 3fe3_A MAP/microtubule affinit 100.0 7.8E-42 2.7E-46  357.4  17.7  248  323-595    14-265 (328)
 36 3ugc_A Tyrosine-protein kinase 100.0 8.2E-43 2.8E-47  359.2   8.5  264  323-599     9-289 (295)
 37 3lb7_A RAF proto-oncogene seri 100.0 4.2E-41 1.4E-45  348.8  21.1  264  323-604    35-303 (307)
 38 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-41 4.7E-46  344.9  16.5  257  322-600     6-263 (268)
 39 3zgw_A Maternal embryonic leuc 100.0 2.9E-41 9.8E-46  355.4  19.0  252  321-595     7-261 (347)
 40 4euu_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45  347.4  23.3  271  323-599     8-307 (319)
 41 1luf_A Muscle-specific tyrosin 100.0   7E-42 2.4E-46  359.8  14.3  264  320-601    43-335 (343)
 42 3qup_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46  355.2  15.7  263  318-598    17-295 (323)
 43 4hcu_A Tyrosine-protein kinase 100.0   6E-42 2.1E-46  347.9  13.1  254  323-598     9-263 (269)
 44 3tki_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45  351.8  19.2  254  323-595     6-262 (323)
 45 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-41 4.1E-46  361.9  15.8  258  323-598    70-342 (367)
 46 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-41 4.6E-46  371.5  15.6  264  321-606   181-445 (452)
 47 1rjb_A FL cytokine receptor; k 100.0 1.4E-41 4.6E-46  358.0  15.0  263  321-600    42-333 (344)
 48 1qcf_A Haematopoetic cell kina 100.0 1.2E-41 4.3E-46  372.1  15.3  261  319-601   183-444 (454)
 49 3niz_A Rhodanese family protei 100.0 1.8E-40 6.1E-45  344.7  23.0  263  321-594    18-300 (311)
 50 4eqm_A Protein kinase; transfe 100.0 1.6E-40 5.4E-45  342.2  22.2  259  323-599    10-273 (294)
 51 2ivs_A Proto-oncogene tyrosine 100.0 2.6E-41 8.8E-46  350.9  16.2  259  322-598    21-308 (314)
 52 3tt0_A Basic fibroblast growth 100.0 4.2E-41 1.4E-45  359.8  17.9  260  322-599    67-350 (382)
 53 3gen_A Tyrosine-protein kinase 100.0 2.3E-41 7.9E-46  346.1  14.7  256  321-598    21-277 (283)
 54 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-41 5.2E-46  375.2  14.1  257  322-599   218-476 (495)
 55 1o6l_A RAC-beta serine/threoni 100.0 2.2E-40 7.6E-45  347.5  21.8  248  324-595     5-261 (337)
 56 3qd2_B Eukaryotic translation  100.0   3E-41   1E-45  352.9  15.1  253  323-595     5-326 (332)
 57 2yab_A Death-associated protei 100.0   1E-40 3.6E-45  353.2  19.4  252  322-594    10-272 (361)
 58 1p4o_A Insulin-like growth fac 100.0 2.2E-41 7.7E-46  352.9  13.9  267  315-599    16-297 (322)
 59 1tki_A Titin; serine kinase, m 100.0 4.7E-41 1.6E-45  350.6  16.3  253  322-595     3-258 (321)
 60 2i1m_A Macrophage colony-stimu 100.0 2.1E-41 7.3E-46  354.9  13.6  264  318-598    40-323 (333)
 61 2izr_A Casein kinase I isoform 100.0   1E-40 3.6E-45  349.4  18.8  258  323-597     8-277 (330)
 62 3lxl_A Tyrosine-protein kinase 100.0 8.7E-42   3E-46  357.1  10.5  265  324-601    23-303 (327)
 63 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.7E-41   2E-45  351.7  16.6  244  323-595     8-259 (336)
 64 3q4u_A Activin receptor type-1 100.0 9.1E-41 3.1E-45  344.6  17.2  260  322-598     6-299 (301)
 65 1k9a_A Carboxyl-terminal SRC k 100.0 9.9E-41 3.4E-45  364.5  18.4  250  322-598   191-442 (450)
 66 1t46_A HOMO sapiens V-KIT hard 100.0 3.8E-41 1.3E-45  349.4  14.2  260  322-598    21-304 (313)
 67 2y0a_A Death-associated protei 100.0 4.2E-40 1.4E-44  344.3  21.8  252  323-595    10-272 (326)
 68 3kex_A Receptor tyrosine-prote 100.0   4E-41 1.4E-45  351.8  13.9  255  324-599    13-274 (325)
 69 4fvq_A Tyrosine-protein kinase 100.0 1.3E-40 4.4E-45  341.5  17.4  252  323-601     7-275 (289)
 70 3op5_A Serine/threonine-protei 100.0 1.1E-40 3.6E-45  354.3  17.3  265  322-598    33-326 (364)
 71 2vd5_A DMPK protein; serine/th 100.0 2.4E-40 8.1E-45  356.0  20.2  265  313-595    50-328 (412)
 72 3p1a_A MYT1 kinase, membrane-a 100.0   2E-40 6.8E-45  344.3  18.9  246  323-595    56-305 (311)
 73 1csn_A Casein kinase-1; phosph 100.0 3.5E-40 1.2E-44  339.7  20.5  261  323-599     9-281 (298)
 74 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-40 9.3E-45  339.5  19.6  260  322-599    22-286 (289)
 75 3dtc_A Mitogen-activated prote 100.0 1.8E-40 6.3E-45  337.1  18.0  253  323-598     6-270 (271)
 76 3brb_A Proto-oncogene tyrosine 100.0 8.6E-41 2.9E-45  347.1  15.6  275  307-599    17-306 (313)
 77 3o0g_A Cell division protein k 100.0 3.3E-40 1.1E-44  339.4  19.7  262  324-595     2-283 (292)
 78 4dc2_A Protein kinase C IOTA t 100.0 3.5E-40 1.2E-44  352.6  20.6  255  323-594    51-318 (396)
 79 1ob3_A PFPK5, cell division co 100.0 1.6E-40 5.6E-45  341.0  17.1  260  324-594     2-280 (288)
 80 4fr4_A YANK1, serine/threonine 100.0 4.5E-40 1.6E-44  350.5  21.1  249  324-594    15-271 (384)
 81 2x4f_A Myosin light chain kina 100.0 1.9E-40 6.3E-45  353.3  17.8  246  328-594    93-342 (373)
 82 2eva_A TAK1 kinase - TAB1 chim 100.0 4.1E-40 1.4E-44  341.3  19.9  261  324-607     8-269 (307)
 83 2xir_A Vascular endothelial gr 100.0 2.6E-40   9E-45  343.6  18.0  271  311-598    14-307 (316)
 84 3dbq_A Dual specificity protei 100.0 2.6E-40 8.9E-45  348.3  18.1  253  322-595     7-274 (343)
 85 2pmi_A Negative RE, cyclin-dep 100.0 5.5E-40 1.9E-44  342.0  20.3  260  323-594     4-293 (317)
 86 2bdw_A Hypothetical protein K1 100.0 2.1E-40 7.1E-45  351.5  17.3  253  322-595    27-285 (362)
 87 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-40 6.7E-45  350.1  16.8  253  321-595    50-306 (349)
 88 2zv2_A Calcium/calmodulin-depe 100.0 4.1E-40 1.4E-44  339.6  18.7  249  323-594    12-292 (298)
 89 1kob_A Twitchin; kinase, intra 100.0 5.1E-40 1.7E-44  351.1  20.0  253  323-595    50-305 (387)
 90 3soa_A Calcium/calmodulin-depe 100.0 2.9E-40   1E-44  359.0  18.4  254  322-595     9-268 (444)
 91 3kfa_A Tyrosine-protein kinase 100.0 1.9E-40 6.4E-45  340.1  16.0  258  320-598     9-268 (288)
 92 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-40 5.9E-45  350.6  16.1  248  323-594    22-280 (353)
 93 3c0i_A Peripheral plasma membr 100.0 6.8E-40 2.3E-44  346.2  20.7  254  323-594    23-286 (351)
 94 4f0f_A Serine/threonine-protei 100.0   9E-40 3.1E-44  335.0  20.9  254  323-598    18-286 (287)
 95 3gxj_A TGF-beta receptor type- 100.0   1E-41 3.4E-46  351.9   6.4  260  323-601     2-297 (303)
 96 1mp8_A Focal adhesion kinase 1 100.0 1.4E-40 4.7E-45  340.2  14.8  255  322-598    13-273 (281)
 97 2v62_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44  347.7  18.0  266  323-601    36-328 (345)
 98 2pvf_A Fibroblast growth facto 100.0 2.6E-40   9E-45  346.9  17.0  259  322-598    33-315 (334)
 99 3llt_A Serine/threonine kinase 100.0 1.5E-40 5.2E-45  352.4  15.2  210  311-531    22-262 (360)
100 4e5w_A Tyrosine-protein kinase 100.0 3.4E-41 1.2E-45  348.1   9.9  262  324-598    21-299 (302)
101 3lzb_A Epidermal growth factor 100.0 3.2E-40 1.1E-44  345.3  17.3  256  323-599    14-276 (327)
102 3ork_A Serine/threonine protei 100.0 1.2E-40 4.3E-45  345.8  14.1  258  322-597    10-277 (311)
103 3t9t_A Tyrosine-protein kinase 100.0 8.8E-41   3E-45  338.5  12.6  254  323-598     7-261 (267)
104 2buj_A Serine/threonine-protei 100.0   3E-40   1E-44  343.6  16.8  264  322-601    27-306 (317)
105 2h8h_A Proto-oncogene tyrosine 100.0 7.5E-41 2.6E-45  373.0  13.0  262  320-603   263-525 (535)
106 3uc3_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44  346.0  20.9  252  322-595    18-275 (361)
107 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-39 4.2E-44  339.2  20.8  245  324-595     6-259 (318)
108 2zmd_A Dual specificity protei 100.0 8.1E-40 2.8E-44  350.5  19.3  252  323-595    55-321 (390)
109 3v8s_A RHO-associated protein  100.0 2.6E-40 8.9E-45  355.5  15.0  260  316-595    61-330 (410)
110 3f3z_A Calcium/calmodulin-depe 100.0 4.2E-40 1.4E-44  335.6  15.8  251  322-594     7-261 (277)
111 3kmu_A ILK, integrin-linked ki 100.0 8.5E-40 2.9E-44  331.7  17.9  252  324-599    10-268 (271)
112 2yex_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44  332.0  18.9  253  323-594     6-261 (276)
113 1xjd_A Protein kinase C, theta 100.0 5.9E-40   2E-44  345.3  17.1  248  322-593    15-268 (345)
114 3a8x_A Protein kinase C IOTA t 100.0 2.1E-39 7.2E-44  341.4  21.2  254  324-594     9-275 (345)
115 1qpc_A LCK kinase; alpha beta  100.0 1.3E-40 4.6E-45  339.7  11.4  256  322-599    11-267 (279)
116 4agu_A Cyclin-dependent kinase 100.0 1.9E-39 6.4E-44  336.6  20.2  264  324-595     3-285 (311)
117 3a62_A Ribosomal protein S6 ki 100.0 1.6E-39 5.4E-44  340.0  19.8  249  323-595    16-277 (327)
118 3is5_A Calcium-dependent prote 100.0 8.8E-40   3E-44  335.0  17.4  253  322-594    20-278 (285)
119 1mqb_A Ephrin type-A receptor  100.0 4.7E-40 1.6E-44  344.9  15.6  255  324-598    44-306 (333)
120 3kn6_A Ribosomal protein S6 ki 100.0 3.3E-40 1.1E-44  344.9  14.4  250  329-595    16-271 (325)
121 2a19_B Interferon-induced, dou 100.0 7.5E-40 2.6E-44  334.6  16.7  249  322-601     9-274 (284)
122 3lxp_A Non-receptor tyrosine-p 100.0 9.8E-41 3.4E-45  347.8  10.2  265  324-599    30-308 (318)
123 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-39 5.2E-44  343.0  19.4  245  324-595    41-294 (350)
124 3gni_B Strad alpha; kinase fol 100.0 7.9E-40 2.7E-44  350.7  17.4  205  322-530    23-239 (389)
125 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.4E-40 2.9E-44  347.4  17.4  255  317-598    58-336 (365)
126 4eut_A Serine/threonine-protei 100.0 8.6E-40   3E-44  351.2  17.6  270  323-598     8-306 (396)
127 2eue_A Carbon catabolite derep 100.0 9.7E-40 3.3E-44  332.7  17.1  245  324-594    13-262 (275)
128 3kk8_A Calcium/calmodulin depe 100.0 1.8E-39 6.3E-44  332.0  19.1  253  322-595     4-262 (284)
129 3cok_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44  333.8  16.3  249  323-594    10-262 (278)
130 3cc6_A Protein tyrosine kinase 100.0 1.2E-39   4E-44  333.2  17.5  255  322-598    10-270 (281)
131 3c1x_A Hepatocyte growth facto 100.0 4.3E-40 1.5E-44  350.3  14.6  256  324-599    89-353 (373)
132 2a2a_A Death-associated protei 100.0   2E-39 6.9E-44  338.2  19.3  253  322-595    10-273 (321)
133 3mdy_A Bone morphogenetic prot 100.0 1.3E-39 4.3E-44  341.6  17.9  268  318-599    31-329 (337)
134 3ll6_A Cyclin G-associated kin 100.0   2E-40 6.9E-45  347.4  11.8  263  319-601    23-308 (337)
135 3hko_A Calcium/calmodulin-depe 100.0 4.2E-40 1.4E-44  346.7  14.2  264  317-595    19-331 (345)
136 3pls_A Macrophage-stimulating  100.0 9.1E-40 3.1E-44  336.6  16.4  256  325-599    22-285 (298)
137 4ejn_A RAC-alpha serine/threon 100.0 5.7E-40   2E-44  358.2  15.7  249  323-595   147-405 (446)
138 3g2f_A Bone morphogenetic prot 100.0 4.5E-40 1.5E-44  345.2  14.2  267  323-598    12-315 (336)
139 1u5q_A Serine/threonine protei 100.0 1.4E-39 4.9E-44  343.2  18.1  245  324-595    54-306 (348)
140 2y94_A 5'-AMP-activated protei 100.0 1.8E-39 6.3E-44  355.1  19.6  246  324-594    16-266 (476)
141 3g33_A Cell division protein k 100.0 1.6E-39 5.4E-44  336.9  18.1  262  322-594     7-296 (308)
142 3fdn_A Serine/threonine-protei 100.0 2.3E-39 7.9E-44  330.7  18.9  248  322-595     7-258 (279)
143 2ac3_A MAP kinase-interacting  100.0 6.5E-40 2.2E-44  340.9  15.0  262  323-595    11-296 (316)
144 2i0e_A Protein kinase C-beta I 100.0 1.7E-39 5.9E-44  342.8  18.2  249  323-595    19-277 (353)
145 3dls_A PAS domain-containing s 100.0 1.4E-39 4.9E-44  341.4  17.5  243  322-595    22-275 (335)
146 3f66_A Hepatocyte growth facto 100.0 1.1E-39 3.7E-44  336.2  16.3  259  322-599    23-289 (298)
147 4hgt_A Casein kinase I isoform 100.0 3.3E-39 1.1E-43  331.9  19.8  261  322-598     7-277 (296)
148 2yfx_A Tyrosine-protein kinase 100.0   1E-39 3.5E-44  341.4  16.2  259  322-598    28-301 (327)
149 2ozo_A Tyrosine-protein kinase 100.0 5.9E-40   2E-44  371.1  15.5  253  325-598   336-595 (613)
150 2h34_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43  333.5  21.1  258  323-600    33-295 (309)
151 3uzp_A CKI-delta, CKID, casein 100.0 4.6E-39 1.6E-43  331.0  20.3  262  322-599     7-278 (296)
152 1u59_A Tyrosine-protein kinase 100.0   1E-39 3.5E-44  334.8  15.4  255  324-599     9-270 (287)
153 2wqm_A Serine/threonine-protei 100.0   6E-39   2E-43  332.8  21.2  259  324-599    32-295 (310)
154 2w1i_A JAK2; chromosomal rearr 100.0 1.4E-40 4.8E-45  347.8   8.9  263  323-598    40-319 (326)
155 3bhy_A Death-associated protei 100.0 4.2E-39 1.5E-43  329.2  19.0  250  324-594     5-265 (283)
156 2clq_A Mitogen-activated prote 100.0 6.5E-39 2.2E-43  329.7  20.4  254  324-595    22-279 (295)
157 1x8b_A WEE1HU, WEE1-like prote 100.0   2E-39 6.7E-44  331.9  15.9  247  322-595     9-280 (289)
158 1ua2_A CAK, cell division prot 100.0 4.4E-39 1.5E-43  339.3  19.0  265  321-596     7-293 (346)
159 1xbb_A Tyrosine-protein kinase 100.0 1.4E-39 4.6E-44  334.6  14.5  254  323-598    15-276 (291)
160 1nxk_A MAP kinase-activated pr 100.0 5.5E-39 1.9E-43  345.1  19.7  251  324-595    61-322 (400)
161 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-39 5.4E-44  340.3  15.0  263  320-594    30-318 (329)
162 3mtl_A Cell division protein k 100.0 2.4E-39 8.3E-44  338.2  16.3  261  324-595     2-282 (324)
163 2vwi_A Serine/threonine-protei 100.0 2.8E-39 9.7E-44  333.6  16.6  264  322-594    13-287 (303)
164 1b6c_B TGF-B superfamily recep 100.0 6.5E-39 2.2E-43  337.1  19.5  266  316-598    34-333 (342)
165 3lm5_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44  339.0  15.8  261  316-595    20-288 (327)
166 3ttj_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43  352.0  19.1  259  322-595    60-356 (464)
167 2qr7_A Ribosomal protein S6 ki 100.0 2.7E-39 9.3E-44  340.1  16.5  252  322-594    20-277 (342)
168 1vzo_A Ribosomal protein S6 ki 100.0 3.8E-39 1.3E-43  341.1  17.6  255  323-597    53-324 (355)
169 3mi9_A Cell division protein k 100.0 4.9E-39 1.7E-43  339.6  18.4  267  323-595    16-312 (351)
170 2acx_A G protein-coupled recep 100.0 5.7E-39 1.9E-43  356.3  19.7  253  323-595   183-445 (576)
171 3pg1_A Mitogen-activated prote 100.0 2.3E-39 7.8E-44  343.6  15.7  270  314-595    12-317 (362)
172 1byg_A CSK, protein (C-termina 100.0 1.5E-39 5.1E-44  331.9  13.7  249  323-598    20-270 (278)
173 4fl3_A Tyrosine-protein kinase 100.0   2E-39 6.9E-44  367.7  16.2  247  330-598   375-628 (635)
174 2jii_A Serine/threonine-protei 100.0   2E-39 6.8E-44  342.8  15.1  261  323-599    41-334 (352)
175 2r5t_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44  343.9  15.9  244  324-591    38-286 (373)
176 2rku_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43  331.1  17.2  249  323-595    14-266 (294)
177 3eqc_A Dual specificity mitoge 100.0 3.5E-39 1.2E-43  341.9  16.9  199  323-531    32-233 (360)
178 1t4h_A Serine/threonine-protei 100.0 1.5E-38   5E-43  326.6  20.5  250  324-595    26-283 (290)
179 3i6u_A CDS1, serine/threonine- 100.0 3.1E-39 1.1E-43  349.3  16.2  254  321-595   132-400 (419)
180 2w5a_A Serine/threonine-protei 100.0 2.5E-39 8.5E-44  330.2  14.4  259  323-598     5-271 (279)
181 3rp9_A Mitogen-activated prote 100.0 3.6E-39 1.2E-43  353.2  16.6  195  323-524    52-280 (458)
182 3byv_A Rhoptry kinase; malaria 100.0 4.7E-40 1.6E-44  351.0   9.3  244  321-594    70-359 (377)
183 4aaa_A Cyclin-dependent kinase 100.0 2.2E-39 7.6E-44  339.4  14.2  263  324-594    25-306 (331)
184 2jam_A Calcium/calmodulin-depe 100.0 6.6E-39 2.2E-43  331.6  17.5  252  322-595     7-262 (304)
185 3oz6_A Mitogen-activated prote 100.0 2.8E-39 9.7E-44  346.3  15.2  202  322-531     7-234 (388)
186 2owb_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43  335.6  18.4  249  323-595    40-292 (335)
187 2j7t_A Serine/threonine-protei 100.0 6.5E-39 2.2E-43  331.0  16.9  253  322-594    17-275 (302)
188 2vgo_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43  326.9  17.9  245  324-594    14-262 (284)
189 2wtk_C Serine/threonine-protei 100.0 2.1E-38 7.1E-43  327.7  20.4  252  323-595     4-264 (305)
190 2y7j_A Phosphorylase B kinase  100.0 3.3E-38 1.1E-42  335.2  22.2  255  319-594    89-359 (365)
191 2h6d_A 5'-AMP-activated protei 100.0   7E-39 2.4E-43  326.3  16.4  248  323-595    10-262 (276)
192 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-38 4.6E-43  329.0  18.6  249  323-595    21-271 (303)
193 1u46_A ACK-1, activated CDC42  100.0 6.5E-39 2.2E-43  329.0  16.0  257  323-599    17-282 (291)
194 1fvr_A Tyrosine-protein kinase 100.0 2.9E-39 9.7E-44  338.0  13.5  254  324-598    25-297 (327)
195 3sv0_A Casein kinase I-like; t 100.0 2.4E-38 8.1E-43  347.0  21.3  260  323-598     6-275 (483)
196 3n9x_A Phosphotransferase; mal 100.0 1.4E-38 4.6E-43  345.8  18.8  200  322-528    24-252 (432)
197 3fme_A Dual specificity mitoge 100.0 1.2E-38 4.1E-43  326.8  17.2  252  322-594     5-266 (290)
198 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.4E-39 1.5E-43  334.9  14.0  270  318-610    27-311 (319)
199 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-38 5.2E-43  332.1  18.0  260  313-594    13-286 (326)
200 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-38 9.7E-43  349.8  21.0  254  323-594   184-448 (543)
201 3nsz_A CK II alpha, casein kin 100.0   2E-38 6.9E-43  331.7  18.6  256  323-595    35-320 (330)
202 2r3i_A Cell division protein k 100.0 2.6E-38 8.8E-43  326.0  19.1  262  324-595     3-284 (299)
203 1cm8_A Phosphorylated MAP kina 100.0 2.3E-38   8E-43  336.4  19.3  257  323-595    24-308 (367)
204 3com_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42  326.4  21.0  251  322-594    27-278 (314)
205 3lij_A Calcium/calmodulin depe 100.0 1.2E-38 4.2E-43  352.2  17.6  251  322-594    35-291 (494)
206 3mwu_A Calmodulin-domain prote 100.0 1.8E-38 6.1E-43  350.3  18.2  252  322-595    20-277 (486)
207 3q5i_A Protein kinase; CDPK, m 100.0 6.6E-38 2.2E-42  347.3  22.1  252  322-595    34-302 (504)
208 3nyv_A Calmodulin-domain prote 100.0 9.9E-39 3.4E-43  352.2  15.2  252  322-595    24-282 (484)
209 3cek_A Dual specificity protei 100.0 2.1E-38 7.3E-43  329.2  16.8  261  314-595    18-293 (313)
210 3an0_A Dual specificity mitoge 100.0 2.4E-38 8.2E-43  332.8  17.4  252  322-594    49-310 (340)
211 1wak_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42  338.4  18.8  261  323-594    36-391 (397)
212 1phk_A Phosphorylase kinase; g 100.0 3.8E-38 1.3E-42  324.6  18.5  252  322-594    15-283 (298)
213 3q60_A ROP5B; pseudokinase, tr 100.0 6.3E-39 2.2E-43  341.5  13.0  251  322-594    60-352 (371)
214 2ycf_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43  331.4  15.3  252  322-594     8-274 (322)
215 2xrw_A Mitogen-activated prote 100.0 6.2E-38 2.1E-42  333.8  19.9  258  323-595    24-319 (371)
216 3pfq_A PKC-B, PKC-beta, protei 100.0 5.7E-38   2E-42  358.2  20.9  248  323-594   340-597 (674)
217 4e7w_A Glycogen synthase kinas 100.0 8.9E-39   3E-43  343.0  13.2  260  323-595    39-322 (394)
218 3rgf_A Cyclin-dependent kinase 100.0 3.9E-38 1.3E-42  339.5  18.3  202  324-531    20-239 (405)
219 1j1b_A Glycogen synthase kinas 100.0 4.4E-38 1.5E-42  340.4  18.5  258  324-595    54-337 (420)
220 3e3p_A Protein kinase, putativ 100.0 1.3E-38 4.3E-43  337.4  13.8  267  318-595    17-315 (360)
221 2i6l_A Mitogen-activated prote 100.0 2.1E-38 7.3E-43  329.5  15.0  262  323-595    10-306 (320)
222 3qyz_A Mitogen-activated prote 100.0 4.7E-38 1.6E-42  333.8  17.9  263  322-595    25-314 (364)
223 3kvw_A DYRK2, dual specificity 100.0 5.2E-38 1.8E-42  340.7  18.5  199  322-531    95-302 (429)
224 3eb0_A Putative uncharacterize 100.0 6.5E-38 2.2E-42  335.2  18.9  261  320-594     3-321 (383)
225 2fst_X Mitogen-activated prote 100.0 3.7E-38 1.3E-42  334.8  16.7  258  322-595    27-312 (367)
226 1z57_A Dual specificity protei 100.0 3.9E-38 1.3E-42  330.1  16.7  262  322-594    12-328 (339)
227 2pml_X PFPK7, Ser/Thr protein  100.0 2.6E-38   9E-43  333.3  14.8  261  323-594    30-322 (348)
228 1blx_A Cyclin-dependent kinase 100.0 2.3E-38 7.8E-43  330.6  14.2  260  321-594     8-296 (326)
229 2b9h_A MAP kinase FUS3, mitoge 100.0 3.4E-38 1.2E-42  333.2  15.1  263  322-595     9-306 (353)
230 2wei_A Calmodulin-domain prote 100.0 8.6E-38 2.9E-42  320.4  15.8  252  321-594    19-276 (287)
231 2j0j_A Focal adhesion kinase 1 100.0   4E-38 1.4E-42  358.4  14.5  255  322-598   388-648 (656)
232 1zy4_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42  319.9  17.8  253  323-595     5-284 (303)
233 1q8y_A SR protein kinase; tran 100.0   4E-37 1.4E-41  327.3  20.0  262  323-595    18-334 (373)
234 2vx3_A Dual specificity tyrosi 100.0 2.9E-37 9.9E-42  330.0  18.9  207  316-531    46-261 (382)
235 3aln_A Dual specificity mitoge 100.0 1.7E-37 5.9E-42  324.4  16.6  255  323-594    21-285 (327)
236 4exu_A Mitogen-activated prote 100.0 2.2E-37 7.5E-42  329.6  16.1  257  322-595    40-324 (371)
237 2iwi_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42  323.1  13.6  242  322-595    29-284 (312)
238 2eu9_A Dual specificity protei 100.0 3.6E-37 1.2E-41  325.0  16.8  261  323-594    18-333 (355)
239 3coi_A Mitogen-activated prote 100.0 2.2E-37 7.6E-42  327.2  15.1  256  323-595    23-306 (353)
240 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4.2E-41  316.2  19.2  249  323-594    24-283 (318)
241 3a99_A Proto-oncogene serine/t 100.0 1.4E-37 4.7E-42  324.3  11.8  243  321-595    40-294 (320)
242 3fhr_A MAP kinase-activated pr 100.0 3.8E-37 1.3E-41  323.2  15.2  254  322-595    26-288 (336)
243 3p23_A Serine/threonine-protei 100.0 2.5E-37 8.7E-42  335.2  14.0  253  320-594    20-283 (432)
244 2rio_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41  333.8  16.0  253  324-594    15-295 (434)
245 3qa8_A MGC80376 protein; kinas 100.0 5.1E-37 1.7E-41  344.0  13.0  259  323-592    13-295 (676)
246 2pzi_A Probable serine/threoni 100.0 8.2E-36 2.8E-40  342.2  15.2  236  323-597    79-324 (681)
247 3uqc_A Probable conserved tran 100.0 3.2E-35 1.1E-39  301.3  14.6  227  324-598    31-262 (286)
248 3dzo_A Rhoptry kinase domain;  100.0 3.6E-36 1.2E-40  324.7   7.8  243  321-593    75-362 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.3E-34 4.4E-39  298.7  16.4  227  324-595    17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 6.2E-35 2.1E-39  306.3   7.8  191  323-529    19-278 (336)
251 4azs_A Methyltransferase WBDD; 100.0 4.1E-29 1.4E-33  279.2   7.4  184  331-526   241-436 (569)
252 3en9_A Glycoprotease, O-sialog  99.9   7E-27 2.4E-31  259.7   8.4  185  327-528   339-538 (540)
253 3a2e_A Ginkbilobin-2; domain 2  99.9 1.9E-25 6.5E-30  191.3  10.2   99   12-114     8-108 (108)
254 2e79_A Ginkbilobin-2; DUF26 fo  99.9 5.2E-25 1.8E-29  189.0  10.2   99   12-114     8-108 (108)
255 3a2e_A Ginkbilobin-2; domain 2  99.9 4.1E-23 1.4E-27  176.8   9.9  103  123-228     6-108 (108)
256 2e79_A Ginkbilobin-2; DUF26 fo  99.9 5.8E-23   2E-27  176.2  10.0  106  120-228     3-108 (108)
257 1zar_A RIO2 kinase; serine kin  99.9 3.1E-23 1.1E-27  211.4   7.7  150  320-502    86-253 (282)
258 1zth_A RIO1 serine protein kin  99.8 4.6E-19 1.6E-23  178.2   7.9  136  326-476    49-219 (258)
259 4gyi_A RIO2 kinase; protein ki  99.6 1.1E-16 3.8E-21  167.5   5.2  138  325-474    96-263 (397)
260 3tm0_A Aminoglycoside 3'-phosp  99.2 1.4E-11 4.7E-16  123.6  10.0  143  323-474    13-212 (263)
261 1nd4_A Aminoglycoside 3'-phosp  99.1   5E-11 1.7E-15  119.0   7.7  137  324-474    20-213 (264)
262 3dxp_A Putative acyl-COA dehyd  99.0 1.6E-09 5.6E-14  113.7  10.9  141  329-475    43-248 (359)
263 3sg8_A APH(2'')-ID; antibiotic  98.9 1.4E-09 4.7E-14  111.5   6.2  187  329-528    25-287 (304)
264 3r70_A Aminoglycoside phosphot  98.6 2.9E-07 9.9E-12   94.8  12.6  136  325-475    38-237 (320)
265 3d1u_A Putative fructosamine-3  98.5 5.8E-07   2E-11   91.0  12.4   77  328-408    19-98  (288)
266 3tdw_A Gentamicin resistance p  98.4   2E-06 6.8E-11   88.0  13.3  136  329-475    24-224 (306)
267 4gkh_A Aminoglycoside 3'-phosp  98.3   2E-06 6.8E-11   86.0  11.3  134  331-474    31-222 (272)
268 3ats_A Putative uncharacterize  98.2 1.8E-06 6.2E-11   90.2   7.0   80  329-408    25-121 (357)
269 3ovc_A Hygromycin-B 4-O-kinase  98.1 4.9E-06 1.7E-10   87.1   9.3  142  328-475    45-243 (362)
270 2q83_A YTAA protein; 2635576,   98.0 3.4E-05 1.2E-09   79.6  12.3  140  330-474    38-251 (346)
271 3f7w_A Putative fructosamine-3  97.9 6.1E-05 2.1E-09   76.0  12.1   78  326-407    17-97  (288)
272 2olc_A MTR kinase, methylthior  97.8 5.2E-05 1.8E-09   80.3  10.2   75  329-405    35-120 (397)
273 3jr1_A Putative fructosamine-3  97.7 0.00018 6.3E-09   73.3  11.5  139  328-471    40-232 (312)
274 2pyw_A Uncharacterized protein  97.5 0.00035 1.2E-08   74.6  11.4   78  444-525   231-313 (420)
275 2ppq_A HSK, HK, homoserine kin  97.2  0.0011 3.8E-08   67.6   9.9  142  330-474    28-216 (322)
276 3dxq_A Choline/ethanolamine ki  97.1   0.001 3.5E-08   67.3   9.0   73  328-408    22-96  (301)
277 1zyl_A Hypothetical protein YI  97.1  0.0044 1.5E-07   63.3  13.4  141  330-474    32-222 (328)
278 3csv_A Aminoglycoside phosphot  97.0  0.0041 1.4E-07   63.8  12.0  141  330-475    24-217 (333)
279 1nw1_A Choline kinase (49.2 KD  97.0  0.0011 3.9E-08   70.7   7.8   72  330-407    79-159 (429)
280 3feg_A Choline/ethanolamine ki  96.6  0.0041 1.4E-07   65.0   8.4  140  330-474    56-253 (379)
281 2qg7_A Ethanolamine kinase PV0  96.4  0.0068 2.3E-07   65.1   8.9   74  329-407   113-188 (458)
282 3i1a_A Spectinomycin phosphotr  96.3   0.033 1.1E-06   57.2  13.3   31  444-474   205-235 (339)
283 3c5i_A Choline kinase; choline  96.3  0.0036 1.2E-07   65.3   6.0   73  330-407    39-121 (369)
284 2yle_A Protein spire homolog 1  95.8   0.079 2.7E-06   50.1  11.4  103  405-527    33-135 (229)
285 3f2s_A CK, chetk-alpha, cholin  95.1   0.041 1.4E-06   57.7   7.9  141  330-474    58-279 (401)
286 3mes_A Choline kinase; malaria  94.4   0.096 3.3E-06   55.4   8.8  140  329-474    75-290 (424)
287 2ks1_B Epidermal growth factor  91.5   0.053 1.8E-06   36.9   0.9   20  277-296    23-42  (44)
288 2l2t_A Receptor tyrosine-prote  91.0   0.052 1.8E-06   36.8   0.4   21  276-296    21-41  (44)
289 3g15_A CK, chetk-alpha, cholin  89.1    0.77 2.6E-05   48.0   7.9   29  446-474   245-279 (401)
290 2jwa_A Receptor tyrosine-prote  87.5    0.12 4.2E-06   34.9   0.3   19  277-295    23-41  (44)
291 3cxl_A N-chimerin; SH2, RHO-GA  87.4    0.13 4.6E-06   55.0   0.7   61  327-390   145-214 (463)
292 4ano_A ESSB; membrane protein,  81.2     4.1 0.00014   38.4   7.8  116  377-529    47-163 (219)
293 4ann_A ESSB; membrane protein,  80.1     3.1 0.00011   39.1   6.5  117  377-529    42-158 (215)
294 2k1k_A Ephrin type-A receptor   75.3    0.47 1.6E-05   31.2  -0.4   27  264-291    11-37  (38)
295 3oja_A Leucine-rich immune mol  56.1       1 3.4E-05   48.5  -3.0   32  362-393   321-352 (487)
296 3ls8_A Phosphatidylinositol 3-  38.9 2.9E+02    0.01   30.0  13.0   83  383-473   402-500 (614)
297 1iij_A ERBB-2 receptor protein  32.8     6.3 0.00021   25.2  -0.8   12  281-292    23-34  (35)
298 1cja_A Protein (actin-fragmin   32.6      81  0.0028   31.6   6.8  137  329-475    74-237 (342)
299 2klu_A T-cell surface glycopro  27.9      19 0.00065   26.4   0.9   13  269-281    12-24  (70)
300 2rdd_B UPF0092 membrane protei  25.8      58   0.002   20.9   2.9    7  289-295    21-27  (37)
301 3hhm_A Phosphatidylinositol-4,  24.3 3.8E+02   0.013   31.3  11.3   59  406-473   899-960 (1091)
302 2l8s_A Integrin alpha-1; trans  21.8      42  0.0015   23.6   1.8    6  288-293    35-40  (54)
303 2knc_A Integrin alpha-IIB; tra  21.4      51  0.0018   23.3   2.1    6  288-293    38-43  (54)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.2e-54  Score=446.15  Aligned_cols=258  Identities=24%  Similarity=0.399  Sum_probs=211.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc------CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            46778899999999999999864      367899999988776777789999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhh----------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEE
Q 006317          398 IYEFVPNSSVDKFIFDAI----------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKI  467 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl  467 (650)
                      |||||++|+|.++|+...          ....++|.++++++.||++||+|||+++   |+||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            999999999999997531          2356999999999999999999999987   999999999999999999999


Q ss_pred             eeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHh
Q 006317          468 SDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKN  546 (650)
Q Consensus       468 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~  546 (650)
                      +|||+++...............||+.|||||++.++.++.++|||||||++|||+| |+.||....   ..++.......
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~---~~~~~~~i~~~  246 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS---NNEVIECITQG  246 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---HHHHHHHHHHT
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHcC
Confidence            99999987654433333445679999999999999999999999999999999999 899986322   22233222221


Q ss_pred             ccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          547 WNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                          ..     +..+...++   ++.+|+.+||+.||++||||+||++.|+..
T Consensus       247 ----~~-----~~~p~~~~~---~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          247 ----RV-----LQRPRTCPQ---EVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             ----CC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CC-----CCCCccchH---HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                11     111222333   355677899999999999999999999763


No 2  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=7.9e-54  Score=440.14  Aligned_cols=263  Identities=25%  Similarity=0.445  Sum_probs=200.8

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      +++.+.++||+|+||+||+|++++  .||||+++...  ......|.+|+.+|++++|||||+++|++.+ +..+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            567788999999999999999753  59999987543  3345679999999999999999999998865 568999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      |++|+|.++|+.  ....++|.+++.|+.||++||+|||+++   ||||||||+||||++++++||+|||+|+.......
T Consensus       113 ~~gGsL~~~l~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          113 CEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             CCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            999999999974  3457999999999999999999999987   99999999999999999999999999987654433


Q ss_pred             CCccceeecCccccChhcccc---CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          482 QGDTSRIVGTFGYMAPEYVTR---GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ........||+.|||||++.+   +.|+.++|||||||+||||+||+.||......  ..+.............     +
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~~~~~p~~-----~  260 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGYASPDL-----S  260 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHTTCCCCCS-----T
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCCCCCc-----c
Confidence            344556789999999999964   46899999999999999999999998632211  1111111111111110     1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCCC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSLP  604 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~~  604 (650)
                      .+....++   .+.+|+.+||+.||++||||.||++.|+....++|
T Consensus       261 ~~~~~~~~---~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          261 KLYKNCPK---AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             TSCTTSCH---HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             cccccchH---HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            11122333   45567789999999999999999999876443343


No 3  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=5.2e-54  Score=443.20  Aligned_cols=256  Identities=27%  Similarity=0.424  Sum_probs=208.8

Q ss_pred             CCCcCCcccccCceeEEEeecc------CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          325 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       325 ~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      .+++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4556789999999999999863      46789999997653 3345679999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhh-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC
Q 006317          398 IYEFVPNSSVDKFIFDAI-------------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI  464 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~  464 (650)
                      |||||++|+|.++|....             ....++|.++++|+.|||+||+|||+++   ||||||||+||||+++++
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence            999999999999997431             1346999999999999999999999987   999999999999999999


Q ss_pred             eEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHH
Q 006317          465 PKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYA  543 (650)
Q Consensus       465 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~  543 (650)
                      +||+|||+++...............||+.|||||++.++.++.++|||||||+||||+| |+.||....   ..++....
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~---~~~~~~~i  260 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---NQDVVEMI  260 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC---HHHHHHHH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC---HHHHHHHH
Confidence            99999999987655444444555689999999999999999999999999999999999 888886322   22333322


Q ss_pred             HHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          544 WKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       544 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..    +...     ......+.   .+.+|+.+||+.||++||||.||++.|+.
T Consensus       261 ~~----~~~~-----~~p~~~~~---~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          261 RN----RQVL-----PCPDDCPA---WVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             HT----TCCC-----CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             Hc----CCCC-----CCcccchH---HHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            21    1111     11222333   35567789999999999999999999986


No 4  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7.6e-54  Score=446.07  Aligned_cols=258  Identities=25%  Similarity=0.391  Sum_probs=203.9

Q ss_pred             cCCCcCCcccccCceeEEEeecc------CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ++|...++||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45677789999999999999864      367899999988776777789999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhh------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCe
Q 006317          398 IYEFVPNSSVDKFIFDAI------------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIP  465 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~  465 (650)
                      |||||++|+|.++|+...            ....++|.++++|+.||++||+|||+.+   ||||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            999999999999997532            2346999999999999999999999987   9999999999999999999


Q ss_pred             EEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHH
Q 006317          466 KISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       466 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~  544 (650)
                      ||+|||+++...............||+.|||||++.+..++.++|||||||+||||+| |+.||....   ..+++....
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~---~~~~~~~i~  274 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS---NTEAIDCIT  274 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC---HHHHHHHHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC---HHHHHHHHH
Confidence            9999999987654444444455689999999999999999999999999999999999 899986322   222222222


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ..    .     .+......+++   +.+|+.+||+.||++||||.||+++|+..
T Consensus       275 ~g----~-----~~~~p~~~~~~---~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          275 QG----R-----ELERPRACPPE---VYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             HT----C-----CCCCCTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             cC----C-----CCCCcccccHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            21    1     11112223333   45677799999999999999999999764


No 5  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.5e-51  Score=432.28  Aligned_cols=269  Identities=27%  Similarity=0.361  Sum_probs=213.7

Q ss_pred             ccChhhHHhhccCCCcCCcccccCceeEEEeeccC------CcceeEeeccccCch-hHHHHHHHHHHHhhCCC-Cceee
Q 006317          313 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQH-RNLVR  384 (650)
Q Consensus       313 ~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H-~niv~  384 (650)
                      .++.+..+...++|++.++||+|+||+||+|++..      ++.||||++...... ....|.+|+.+|.+++| ||||+
T Consensus        53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            34444555566789999999999999999998542      357999999765443 34579999999999965 89999


Q ss_pred             ecceeecC-CeeEEEEecCCCCChhHHHHhhhc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEec
Q 006317          385 LLGFSFEE-TERLLIYEFVPNSSVDKFIFDAIK-------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHR  450 (650)
Q Consensus       385 l~g~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr  450 (650)
                      ++|+|.+. +..+||||||++|+|.++|+....             +..++|.+++.++.|||+||+|||+++   ||||
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHR  209 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHR  209 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecC
Confidence            99999764 568999999999999999976322             345899999999999999999999987   9999


Q ss_pred             CCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCC
Q 006317          451 DLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNS  529 (650)
Q Consensus       451 Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~  529 (650)
                      ||||+||||++++.+||+|||+|+....+..........||+.|||||++.++.++.++|||||||+||||+| |+.||.
T Consensus       210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~  289 (353)
T 4ase_A          210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  289 (353)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999997655444444556789999999999999999999999999999999998 899986


Q ss_pred             CCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          530 FRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       530 ~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .....  ..+......    +..     +......++   ++.+++.+||+.||++|||+.||++.|+.
T Consensus       290 ~~~~~--~~~~~~i~~----g~~-----~~~p~~~~~---~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          290 GVKID--EEFCRRLKE----GTR-----MRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             TCCCS--HHHHHHHHH----TCC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCHH--HHHHHHHHc----CCC-----CCCCccCCH---HHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            32211  112221111    111     112222333   45567779999999999999999998864


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=7e-51  Score=423.48  Aligned_cols=249  Identities=24%  Similarity=0.350  Sum_probs=205.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecC
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      +.|+..++||+|+||+||+|+.. +|+.||||++..........+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56888999999999999999865 58999999997665555567899999999999999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCC
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQ  482 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~  482 (650)
                      ++|+|.+++..    ..+++.++..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++.+....  
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--  224 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  224 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--
Confidence            99999998853    46999999999999999999999998   9999999999999999999999999998765332  


Q ss_pred             CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCC
Q 006317          483 GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRN  562 (650)
Q Consensus       483 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~  562 (650)
                      ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...   ...+.+.......         .+.+..
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~---~~~~~~~~i~~~~---------~~~~~~  292 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNL---------PPRLKN  292 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS---CHHHHHHHHHHSS---------CCCCSC
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHcCC---------CCCCCc
Confidence            2344578999999999999999999999999999999999999998632   2222222222111         111111


Q ss_pred             CChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          563 GSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       563 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                       ...-..++.+++.+||+.||++|||+.|+++
T Consensus       293 -~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          293 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             0111134456777999999999999999874


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.6e-51  Score=429.02  Aligned_cols=250  Identities=21%  Similarity=0.329  Sum_probs=199.4

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ++|++.++||+|+||+||+++. .+|+.||||++.+..  ......+.+|+.+|++++|||||++++++.+++..+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999985 458999999997653  2334578999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      ||++|+|.++|... +...+++.+++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.+....
T Consensus       104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             CCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            99999999999742 3456899999999999999999999988   9999999999999999999999999998654221


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                        ......+||+.|||||++.+..|+.++|||||||++|||+||+.||...   ...+++......    ..     +.+
T Consensus       180 --~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~---~~~~~~~~i~~~----~~-----~~~  245 (350)
T 4b9d_A          180 --ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG---SMKNLVLKIISG----SF-----PPV  245 (350)
T ss_dssp             --HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS---SHHHHHHHHHHT----CC-----CCC
T ss_pred             --ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHcC----CC-----CCC
Confidence              1234467999999999999999999999999999999999999999632   222222222111    10     112


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ....+.+   +.+++.+||+.||++|||+.|+++
T Consensus       246 ~~~~s~~---~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          246 SLHYSYD---LRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             CTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CccCCHH---HHHHHHHHccCChhHCcCHHHHhc
Confidence            2223333   456777999999999999999985


No 8  
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1e-50  Score=419.23  Aligned_cols=265  Identities=23%  Similarity=0.318  Sum_probs=199.3

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCC----eeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEET----ERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv~  399 (650)
                      ++|.+.++||+|+||+||+|++ +|+.||||+++..... ...++.|+..+.+++|||||+++|++.+++    ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4567789999999999999998 6899999999754322 223445666777899999999999998654    579999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-----SRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      |||++|+|.++|+.    ..++|..+++++.|+++||+|||++     ..++|+||||||+||||++++++||+|||+++
T Consensus        81 Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            99999999999963    4699999999999999999999986     23469999999999999999999999999998


Q ss_pred             ccccCCCC--CccceeecCccccChhccccC------CCCccccccchhHHHHHHHhCCCCCCCCCCccc--------ch
Q 006317          475 LFEMDQSQ--GDTSRIVGTFGYMAPEYVTRG------HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA--------ED  538 (650)
Q Consensus       475 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~--------~~  538 (650)
                      ........  ......+||+.|||||++.+.      .++.++|||||||+||||+||+.|+........        ..
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            76543321  223346899999999999764      467899999999999999999877643221110        00


Q ss_pred             hHHHHHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          539 LLTYAWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       539 l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..........    .+.++|.++..  ..+....+.+|+.+||+.||++||||.||+++|+.
T Consensus       237 ~~~~~~~~~~----~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          237 SVEEMRKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             CHHHHHHHHT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHHHHHh----cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            0111111111    11223333322  23445567789999999999999999999999864


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.6e-50  Score=419.66  Aligned_cols=252  Identities=22%  Similarity=0.268  Sum_probs=201.5

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      .+.|...++||+|+||.||+|+.. +|+.||||+++.....     .+|+.++++++|||||++++++.+++..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            456788899999999999999864 5899999999765332     4699999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC-CeEEeeeecccccccCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM-IPKISDFGMARLFEMDQ  480 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DFGla~~~~~~~  480 (650)
                      |++|+|.++|..   .+.+++.++..++.||+.||+|||+++   ||||||||+||||+.++ ++||+|||+++.+..+.
T Consensus       132 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            999999999973   467999999999999999999999987   99999999999999998 69999999999765432


Q ss_pred             CCC---ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          481 SQG---DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       481 ~~~---~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ...   .....+||+.|||||++.+..++.++|||||||++|||+||+.||.......   +......   ......   
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~i~~---~~~~~~---  276 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LCLKIAS---EPPPIR---  276 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CHHHHHH---SCCGGG---
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHHc---CCCCch---
Confidence            211   2334679999999999999999999999999999999999999996433222   2221111   111111   


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       .+....+.+   +.+++.+||+.||++|||+.||++.|..
T Consensus       277 -~~~~~~s~~---~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          277 -EIPPSCAPL---TAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             -GSCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -hcCccCCHH---HHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence             112223333   4466779999999999999999987753


No 10 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.5e-50  Score=414.90  Aligned_cols=248  Identities=24%  Similarity=0.320  Sum_probs=207.4

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.++||+|+||+||+++. .+|+.||||++.+..   ......+.+|+++|++++|||||++++++.+++..+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4689999999999999999985 458999999997643   223457899999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.++|.   +.+.+++..+..++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.+...
T Consensus       112 Ey~~gG~L~~~i~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            9999999999997   3467999999999999999999999998   999999999999999999999999999987655


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      .........+||+.|||||++.+..++.++||||+||++|||+||+.||...   ....+.......          +..
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~---~~~~~~~~i~~~----------~~~  252 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG---NEGLIFAKIIKL----------EYD  252 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHHHHHT----------CCC
T ss_pred             CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHcC----------CCC
Confidence            4444556679999999999999999999999999999999999999999632   222222222211          111


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVV  593 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl  593 (650)
                      +.....++   +.+++.+||+.||++|||++|++
T Consensus       253 ~p~~~s~~---~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          253 FPEKFFPK---ARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CCTTCCHH---HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCcccCHH---HHHHHHHHccCCHhHCcChHHHc
Confidence            22223333   45677799999999999999864


No 11 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4e-50  Score=409.62  Aligned_cols=246  Identities=24%  Similarity=0.365  Sum_probs=194.5

Q ss_pred             CcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeec----CCeeEEEE
Q 006317          327 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFE----ETERLLIY  399 (650)
Q Consensus       327 ~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~  399 (650)
                      +..++||+|+||+||+|+.. ++..||||++....  ......|.+|+.+|++++|||||++++++.+    +...+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            56678999999999999864 58899999996543  2344569999999999999999999999865    34579999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC-CCCeEEeeeeccccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA-DMIPKISDFGMARLFEM  478 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DFGla~~~~~  478 (650)
                      |||++|+|.++|..   ...+++..+..++.||+.||+|||+++ ++|+||||||+||||+. ++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            99999999999973   467999999999999999999999875 45999999999999984 79999999999985432


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                          ......+||+.|||||++.+ .++.++|||||||++|||+||+.||....  ....+..    ....+...    +
T Consensus       185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~--~~~~~~~----~i~~~~~~----~  249 (290)
T 3fpq_A          185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ--NAAQIYR----RVTSGVKP----A  249 (290)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS--SHHHHHH----HHTTTCCC----G
T ss_pred             ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC--cHHHHHH----HHHcCCCC----C
Confidence                23445789999999998865 69999999999999999999999985321  1111211    11111111    1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .+.....+   ++.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~---~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 SFDKVAIP---EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GGGGCCCH---HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCccCCH---HHHHHHHHHccCChhHCcCHHHHhc
Confidence            11112223   3556777999999999999999975


No 12 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.1e-49  Score=424.44  Aligned_cols=248  Identities=24%  Similarity=0.359  Sum_probs=206.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      .+.|+..++||+|+||.||+|+.. +|+.||||++..........+.+|+.+|++++|||||++++++.+++..||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            467999999999999999999864 5899999999876655566789999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      |++|+|.+++..    ..+++.++..++.||+.||+|||+++   ||||||||+||||+.+|.+||+|||+++.+.... 
T Consensus       230 ~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-  301 (423)
T 4fie_A          230 LEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-  301 (423)
T ss_dssp             CTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-
T ss_pred             CCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC-
Confidence            999999998853    46999999999999999999999998   9999999999999999999999999998765332 


Q ss_pred             CCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCC
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLR  561 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~  561 (650)
                       ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...   ...+.+.......         .+.+.
T Consensus       302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~---~~~~~~~~i~~~~---------~~~~~  368 (423)
T 4fie_A          302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIRDNL---------PPRLK  368 (423)
T ss_dssp             -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS---CHHHHHHHHHHSC---------CCCCS
T ss_pred             -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHcCC---------CCCCc
Confidence             2344578999999999999999999999999999999999999998632   2222222222111         11111


Q ss_pred             --CCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          562 --NGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       562 --~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                        .....   .+.+++.+||+.||++|||+.|+++
T Consensus       369 ~~~~~s~---~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          369 NLHKVSP---SLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CTTSSCH---HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCH---HHHHHHHHHcCCChhHCcCHHHHhc
Confidence              11233   3456777999999999999999874


No 13 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=6.1e-49  Score=397.39  Aligned_cols=245  Identities=22%  Similarity=0.351  Sum_probs=188.7

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.+.||+|+||+||+++.. +|+.||||++.+...   .....+.+|+.++++++|||||++++++.+++..++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999864 589999999976532   23456899999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+ +|+|.+++.   ++..+++.++..++.||+.||+|||+++   |+||||||+||||++++++||+|||+++.....
T Consensus        93 Ey~-~g~L~~~l~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           93 EYA-GNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHH---HSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             eCC-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999 679999886   4567999999999999999999999998   999999999999999999999999999865432


Q ss_pred             CCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                         ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||...   ....+.......    .      .
T Consensus       166 ---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~---~~~~~~~~i~~~----~------~  229 (275)
T 3hyh_A          166 ---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE---SIPVLFKNISNG----V------Y  229 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHHHHHT----C------C
T ss_pred             ---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC---CHHHHHHHHHcC----C------C
Confidence               22345689999999999998876 58999999999999999999998632   222222222111    0      1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .+....+++   +.+++.+||+.||++|||+.|+++
T Consensus       230 ~~p~~~s~~---~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          230 TLPKFLSPG---AAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CCCTTSCHH---HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHH---HHHHHHHHccCChhHCcCHHHHHc
Confidence            112222333   456777999999999999999986


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=3.6e-49  Score=404.50  Aligned_cols=247  Identities=27%  Similarity=0.327  Sum_probs=194.5

Q ss_pred             cCCCcCCcccccCceeEEEeecc----CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ++|++.+.||+|+||+||+++..    .++.||||++++...  .....+.+|+.+|++++|||||++++++.+++..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999752    367899999976532  233468889999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      |||||++|+|.++|..   ...+++.++..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+...
T Consensus       104 vmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            9999999999999973   467999999999999999999999998   9999999999999999999999999998654


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ...  ......+||+.|||||++.+..++.++|||||||++|||+||+.||...   ...++.......          .
T Consensus       178 ~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~---~~~~~~~~i~~~----------~  242 (304)
T 3ubd_A          178 DHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK---DRKETMTMILKA----------K  242 (304)
T ss_dssp             -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHHHHHC----------C
T ss_pred             CCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc---CHHHHHHHHHcC----------C
Confidence            322  2234568999999999999999999999999999999999999999632   222222222211          0


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCC-----HHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPT-----MASVVV  594 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~evl~  594 (650)
                      ..+....+.+   +.+++.+||+.||++|||     ++|+++
T Consensus       243 ~~~p~~~s~~---~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          243 LGMPQFLSPE---AQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CCCCTTSCHH---HHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCCCCcCCHH---HHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            1112222333   456777999999999998     466663


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=9.2e-49  Score=402.82  Aligned_cols=251  Identities=22%  Similarity=0.347  Sum_probs=187.2

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch-hHHHHHHHHHHHhhCCCCceeeecceeecCC--------
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEET--------  393 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--------  393 (650)
                      ++|++.+.||+|+||+||+|+.. +|+.||||+++..... ....+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            35888999999999999999864 5899999999765433 3457899999999999999999999987544        


Q ss_pred             ----eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEee
Q 006317          394 ----ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISD  469 (650)
Q Consensus       394 ----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D  469 (650)
                          ..++|||||++|+|.+++.........++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999975433345677889999999999999999997   99999999999999999999999


Q ss_pred             eecccccccCCCCC----------ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchh
Q 006317          470 FGMARLFEMDQSQG----------DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDL  539 (650)
Q Consensus       470 FGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l  539 (650)
                      ||+++.+.......          .....+||+.|||||++.+..++.++|||||||++|||++   ||...     .+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-----~~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-----MER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-----cHH
Confidence            99998765432211          2234579999999999999999999999999999999996   55311     111


Q ss_pred             HHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          540 LTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       540 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ...... .....        .+.........+..++.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~-~~~~~--------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          234 VRTLTD-VRNLK--------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHH-HHTTC--------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHH-HhcCC--------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111111 11110        00011122234456888999999999999999986


No 16 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=7.3e-46  Score=386.96  Aligned_cols=283  Identities=34%  Similarity=0.617  Sum_probs=240.9

Q ss_pred             ccChhhHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecC
Q 006317          313 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE  392 (650)
Q Consensus       313 ~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  392 (650)
                      .+++.++...+++|+..+.||+|+||.||+|++.+++.||||++..........+.+|+.++++++||||+++++++.+.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            44556667788999999999999999999999888999999999877666667899999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                      +..++||||+++|+|.+++.... ....++|..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg  184 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFG  184 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCT
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecc
Confidence            99999999999999999986432 1235999999999999999999999987   9999999999999999999999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT  551 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  551 (650)
                      +++...............||+.|+|||++.+..++.++||||||+++|||++|+.|+......+......+.......+.
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            99865433333334456789999999999999999999999999999999999999976665555566666555555566


Q ss_pred             cccccCccCCCC-ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          552 ALNLIDPTLRNG-SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       552 ~~~~id~~l~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ....+++.+... .......+.+++.+||+.||++|||+.||++.|+.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  312 (321)
T 2qkw_B          265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY  312 (321)
T ss_dssp             CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            666777766554 45666778899999999999999999999999875


No 17 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=6.2e-45  Score=380.60  Aligned_cols=290  Identities=40%  Similarity=0.700  Sum_probs=241.5

Q ss_pred             ccccChhhHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCch-hHHHHHHHHHHHhhCCCCceeeeccee
Q 006317          311 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFS  389 (650)
Q Consensus       311 ~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~  389 (650)
                      ...+++.++....++|...+.||+|+||.||+++..+|+.||||++...... ....+.+|+.++++++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            3467889999999999999999999999999999888999999999765332 233689999999999999999999999


Q ss_pred             ecCCeeEEEEecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          390 FEETERLLIYEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       390 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                      ...+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+...++|+||||||+|||+++++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999997532 23459999999999999999999999833349999999999999999999999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCC--CcccchhHHHHHHh
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRI--GEEAEDLLTYAWKN  546 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~--~~~~~~l~~~~~~~  546 (650)
                      |||+++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....  .........+....
T Consensus       177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             cCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence            9999987643322 22334569999999999999999999999999999999999999986321  22333455566566


Q ss_pred             ccCCCcccccCccCCCC-ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          547 WNEGTALNLIDPTLRNG-SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      .........++..+... .......+.+++.+||+.||++|||+.||+++|+....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            66666666777666555 56667888899999999999999999999999987544


No 18 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.6e-45  Score=390.37  Aligned_cols=263  Identities=20%  Similarity=0.277  Sum_probs=199.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeec------CC
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFE------ET  393 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~  393 (650)
                      .++|++.++||+|+||+||+|+.. +|+.||||++++...  .....+.+|+.+|++++|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            357999999999999999999864 689999999976432  334568899999999999999999998753      36


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      ..+||||||+ |+|.+++.   +...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       133 ~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeeccee
Confidence            7899999996 67988886   4567999999999999999999999998   999999999999999999999999999


Q ss_pred             cccccCC--CCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          474 RLFEMDQ--SQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       474 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      +.+....  ........+||+.|||||++.+. .++.++||||+||++|||++|+.||....   ..+.+..........
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~---~~~~l~~I~~~~g~p  282 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN---YVHQLQLIMMVLGTP  282 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS---HHHHHHHHHHHHCCC
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC---HHHHHHHHHHhcCCC
Confidence            8764322  12234457899999999998875 56999999999999999999999986432   222222222211111


Q ss_pred             Ccc-----------cccC--ccCCCCChHH-----HHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 TAL-----------NLID--PTLRNGSSSE-----IMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ~~~-----------~~id--~~l~~~~~~~-----~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ...           ..+.  +.........     ..++.+++.+||+.||++|||+.|+++-
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000           0000  0000001111     1345678889999999999999998753


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.2e-44  Score=380.20  Aligned_cols=202  Identities=22%  Similarity=0.340  Sum_probs=171.7

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeecc----CCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecC
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEE  392 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  392 (650)
                      .+....+.|++.++||+|+||+||+|+.+    .++.||||++....  ....+.+|+++|+.+ +|||||++++++.+.
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            34455688999999999999999999743    46789999987653  234678999999998 699999999999999


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC-CCeEEeeee
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD-MIPKISDFG  471 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DFG  471 (650)
                      +..+|||||+++|+|.+++.      .+++.++..++.||+.||+|||+++   |+||||||+||||+.+ +.+||+|||
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFG  163 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFG  163 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCC
Confidence            99999999999999999873      4899999999999999999999998   9999999999999877 799999999


Q ss_pred             cccccccCCC--------------------------CCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhC
Q 006317          472 MARLFEMDQS--------------------------QGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISG  524 (650)
Q Consensus       472 la~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG  524 (650)
                      +|+.......                          .......+||+.|||||++.+. .++.++||||+||++|||+||
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G  243 (361)
T 4f9c_A          164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG  243 (361)
T ss_dssp             TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence            9986543211                          0112345799999999999875 589999999999999999999


Q ss_pred             CCCCCC
Q 006317          525 QKNNSF  530 (650)
Q Consensus       525 ~~p~~~  530 (650)
                      +.||..
T Consensus       244 ~~Pf~~  249 (361)
T 4f9c_A          244 RYPFYK  249 (361)
T ss_dssp             CSSSSC
T ss_pred             CCCCCC
Confidence            999853


No 20 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=6.1e-44  Score=399.10  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=206.8

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecC
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      ++|++.+.||+|+||.||+++.+ +|+.||||++..........+.+|+.+|++++|||||++++++.+....+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            57999999999999999999864 58999999998776666677899999999999999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC--CCeEEeeeecccccccCC
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD--MIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl~DFGla~~~~~~~  480 (650)
                      ++|+|.++|..  +...+++.++..++.||+.||+|||+++   |+||||||+||||+.+  +.+||+|||+++.+... 
T Consensus       237 ~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-  310 (573)
T 3uto_A          237 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-  310 (573)
T ss_dssp             CCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred             CCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence            99999998864  3457999999999999999999999998   9999999999999865  89999999999876532 


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                        ......+||+.|||||++.+..|+.++|||||||++|||++|+.||....   ..+.+.......  ..    +.+..
T Consensus       311 --~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~---~~~~~~~i~~~~--~~----~~~~~  379 (573)
T 3uto_A          311 --QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN---DDETLRNVKSCD--WN----MDDSA  379 (573)
T ss_dssp             --SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHHHTTC--CC----CCSGG
T ss_pred             --CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---HHHHHHHHHhCC--CC----CCccc
Confidence              23445689999999999999999999999999999999999999986322   222222221110  00    01111


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .....+   .+.+++.+||+.||++|||+.|+++-
T Consensus       380 ~~~~s~---~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          380 FSGISE---DGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             GTTSCH---HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccCCCH---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111223   34567779999999999999999863


No 21 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.1e-43  Score=395.01  Aligned_cols=248  Identities=25%  Similarity=0.317  Sum_probs=198.1

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHH---HHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFK---NEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~---~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ++|++.++||+|+||+||+++.. +|+.||||++.+...   .....+.   .++.+++.++|||||++++++.+.+..+
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            57999999999999999999865 589999999975422   1222233   3466777889999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      |||||++||+|.++|..   .+.+++..+..++.||+.||+|||+++   ||||||||+||||+.+|++||+|||+|+.+
T Consensus       269 lVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence            99999999999999973   467999999999999999999999988   999999999999999999999999999876


Q ss_pred             ccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ...    .....+||+.|||||++.. ..|+.++|||||||+||||++|+.||......+...+.......         
T Consensus       343 ~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~---------  409 (689)
T 3v5w_A          343 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---------  409 (689)
T ss_dssp             SSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC---------
T ss_pred             CCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC---------
Confidence            432    2344689999999999975 57999999999999999999999999643333222222222111         


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCC-----HHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPT-----MASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~evl~  594 (650)
                       ...+......+   +.+|+.+||+.||++|++     +.||++
T Consensus       410 -~~~~p~~~S~~---a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          410 -AVELPDSFSPE---LRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             -CCCCCTTSCHH---HHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             -CCCCCccCCHH---HHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence             11122223333   456777999999999998     678763


No 22 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=7.2e-43  Score=361.67  Aligned_cols=282  Identities=38%  Similarity=0.571  Sum_probs=230.5

Q ss_pred             ccccChhhHHhhccCCCcC------CcccccCceeEEEeeccCCcceeEeeccccC----chhHHHHHHHHHHHhhCCCC
Q 006317          311 SLQFDFSTIRDATNNFSTD------NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS----VQGELEFKNEVLLVARLQHR  380 (650)
Q Consensus       311 ~~~~~~~~~~~~~~~f~~~------~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H~  380 (650)
                      ...|.+.++..++++|...      ++||+|+||.||+|+. +++.||||++....    ......+.+|+.++++++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            3568889999999999887      8999999999999987 68899999986532    23345789999999999999


Q ss_pred             ceeeecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC
Q 006317          381 NLVRLLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD  460 (650)
Q Consensus       381 niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~  460 (650)
                      ||+++++++.+.+..++||||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||++
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~  167 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLD  167 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEc
Confidence            999999999999999999999999999999976555667999999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhH
Q 006317          461 ADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLL  540 (650)
Q Consensus       461 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~  540 (650)
                      +++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.|+.........  .
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~  244 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL--L  244 (307)
T ss_dssp             TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--T
T ss_pred             CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--H
Confidence            999999999999986654333223344578999999998764 5889999999999999999999998754332211  1


Q ss_pred             HHHHHhc-cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          541 TYAWKNW-NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       541 ~~~~~~~-~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      .+..... ........+++.+..........+.+++..||+.||++|||+.+|++.|+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            1111111 1223334555555555666667788899999999999999999999999753


No 23 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=4.7e-43  Score=363.75  Aligned_cols=266  Identities=26%  Similarity=0.395  Sum_probs=203.2

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCee
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETER  395 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  395 (650)
                      .+....++|++.++||+|+||.||+++. +|+.||||++.....  .....+.+|+.++++++||||+++++++.+.+..
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            3334457899999999999999999987 688999999976543  3345789999999999999999999999999999


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++|+|.+++........+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            999999999999999975433345999999999999999999999874 3499999999999999999999999999975


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .....  .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ...........   .    
T Consensus       189 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~---~~~~~~~~~~~---~----  256 (309)
T 3p86_A          189 KASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP---AQVVAAVGFKC---K----  256 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH---HHHHHHHHHSC---C----
T ss_pred             ccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcC---C----
Confidence            43221  223346799999999999999999999999999999999999999863321   11111111110   0    


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                       ...+....+.   .+.+++.+||+.||++|||+.+|++.|+....
T Consensus       257 -~~~~~~~~~~---~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          257 -RLEIPRNLNP---QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             -CCCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             -CCCCCccCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence             0111122233   35567779999999999999999999987543


No 24 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.6e-43  Score=367.98  Aligned_cols=266  Identities=26%  Similarity=0.375  Sum_probs=206.1

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCC----eeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEET----ERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv  398 (650)
                      .++|+..++||+|+||.||+|+.. ++.||||++..... ....+.+|+.++.+++||||+++++++....    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            468899999999999999999874 78999999976432 3335667999999999999999999998754    36999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-------CCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-------SRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                      |||+++|+|.+++..    ..+++..++.++.||+.||+|||+.       ...+|+||||||+||||+.++.+||+|||
T Consensus       101 ~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            999999999999963    4599999999999999999999987       01139999999999999999999999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccC-----CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHH----
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-----HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTY----  542 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~----  542 (650)
                      +++.+.............||+.|+|||++.+.     .++.++||||||+++|||+||+.||..............    
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence            99877654444344456799999999999863     456789999999999999999999875433222111111    


Q ss_pred             -----HHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          543 -----AWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       543 -----~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                           .......    ....+.+...  .......+.+++.+||+.||++|||+.||++.|+.
T Consensus       257 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  315 (322)
T 3soc_A          257 PSLEDMQEVVVH----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ  315 (322)
T ss_dssp             CCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             Cchhhhhhhhhc----ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                 0000000    1111111111  22344567789999999999999999999999874


No 25 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3e-42  Score=357.70  Aligned_cols=259  Identities=25%  Similarity=0.430  Sum_probs=208.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      .++|...++||+|+||.||+++.. +++.||+|++..........+.+|+.++++++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            357888999999999999999864 5889999998776666777899999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      +++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.......
T Consensus        89 ~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           89 IKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             CTTCBHHHHHHH--CCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             cCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            999999999975  3567999999999999999999999987   99999999999999999999999999987643322


Q ss_pred             CC------------ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccC
Q 006317          482 QG------------DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNE  549 (650)
Q Consensus       482 ~~------------~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  549 (650)
                      ..            ......||+.|+|||++.+..++.++||||||+++|||++|..|+.............        
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--------  235 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--------  235 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC--------
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh--------
Confidence            11            1114579999999999999999999999999999999999998876432221110000        


Q ss_pred             CCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          550 GTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       550 ~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                        .....+.......+.   .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       236 --~~~~~~~~~~~~~~~---~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          236 --VRGFLDRYCPPNCPP---SFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             --HHHHHHHTCCTTCCT---THHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --hhccccccCCCCCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              000011111112222   345677799999999999999999999764


No 26 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=3.2e-42  Score=366.66  Aligned_cols=258  Identities=24%  Similarity=0.367  Sum_probs=207.8

Q ss_pred             ccCCCcCCcccccCceeEEEeecc--------CCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCceeeecceeecC
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLVRLLGFSFEE  392 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  392 (650)
                      .++|.+.+.||+|+||.||+++..        ++..||||+++.... .....+.+|+.+++++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467889999999999999999752        345799999976533 3445789999999999 899999999999999


Q ss_pred             CeeEEEEecCCCCChhHHHHhhh-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAI-------------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL  459 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl  459 (650)
                      +..++||||+++|+|.+++....             ....+++..++.++.||+.||+|||+++   |+||||||+||||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            99999999999999999997532             1245899999999999999999999987   9999999999999


Q ss_pred             CCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccch
Q 006317          460 DADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAED  538 (650)
Q Consensus       460 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~  538 (650)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.|+....   ..+
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~---~~~  313 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---VEE  313 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---GGG
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC---HHH
Confidence            9999999999999986654433333444567889999999999999999999999999999999 888886432   222


Q ss_pred             hHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          539 LLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       539 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      +.........         +........   .+.+++.+||+.||++||++.||++.|+.
T Consensus       314 ~~~~~~~~~~---------~~~~~~~~~---~l~~li~~~l~~dP~~Rpt~~ell~~L~~  361 (370)
T 2psq_A          314 LFKLLKEGHR---------MDKPANCTN---ELYMMMRDCWHAVPSQRPTFKQLVEDLDR  361 (370)
T ss_dssp             HHHHHHTTCC---------CCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCCC---------CCCCCCCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            2222211110         111112233   45567779999999999999999999875


No 27 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=8e-42  Score=352.47  Aligned_cols=252  Identities=25%  Similarity=0.372  Sum_probs=205.4

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|+..++||+|+||.||+++. .+++.||||++..........+.+|+.++++++||||+++++++..++..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            456899999999999999999985 4688999999977665666678999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++|+|.+++..    ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.......
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            9999999999863    36999999999999999999999987   9999999999999999999999999998665332


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                        .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .............    ..   ..
T Consensus       171 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~~~~~~~~----~~---~~  238 (297)
T 3fxz_A          171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LRALYLIATNGTP----EL---QN  238 (297)
T ss_dssp             --CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHHHCSC----CC---SC
T ss_pred             --cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC----CC---CC
Confidence              223446799999999999999999999999999999999999999863221   1111111111000    00   00


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ....+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~---~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          239 PEKLS---AIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             GGGSC---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccC---HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            01112   335567779999999999999999753


No 28 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.5e-42  Score=374.09  Aligned_cols=265  Identities=18%  Similarity=0.224  Sum_probs=207.1

Q ss_pred             cChhhHHhhccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCch---hHHHHHHHHHHHhhCCCCceeeeccee
Q 006317          314 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFS  389 (650)
Q Consensus       314 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~  389 (650)
                      +.+.+++...++|+..++||+|+||+||+++..+ ++.||||++.+....   ....+.+|..++..++||||+++++++
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            4556677778999999999999999999999764 788999999754221   122388999999999999999999999


Q ss_pred             ecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEee
Q 006317          390 FEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISD  469 (650)
Q Consensus       390 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D  469 (650)
                      .+.+..+|||||+++|+|.+++..  ....+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~D  218 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLAD  218 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcc
Confidence            999999999999999999999974  2467999999999999999999999987   99999999999999999999999


Q ss_pred             eecccccccCCCCCccceeecCccccChhccc-----cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          470 FGMARLFEMDQSQGDTSRIVGTFGYMAPEYVT-----RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       470 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      ||+++....... ......+||+.|+|||++.     .+.++.++|||||||++|||++|+.||.....   .+......
T Consensus       219 FGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~---~~~~~~i~  294 (437)
T 4aw2_A          219 FGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIM  294 (437)
T ss_dssp             CTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHH
T ss_pred             hhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh---hHHHHhhh
Confidence            999976543222 1223467999999999987     56789999999999999999999999864322   12221111


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCC--CCCHHHHHHH
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVAN--RPTMASVVVM  595 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~--RPt~~evl~~  595 (650)
                      ....     ...-|.......++   +.+++.+||+.+|++  ||+++|+++-
T Consensus       295 ~~~~-----~~~~p~~~~~~s~~---~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          295 NHKE-----RFQFPTQVTDVSEN---AKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             THHH-----HCCCCSSCCCSCHH---HHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hccc-----cccCCcccccCCHH---HHHHHHHHhcccccccCCCCHHHHhCC
Confidence            1000     00001111122334   345666788777877  9999999864


No 29 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=2.6e-41  Score=352.63  Aligned_cols=261  Identities=24%  Similarity=0.357  Sum_probs=209.7

Q ss_pred             ccChhhHHhhccC----------CCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCc
Q 006317          313 QFDFSTIRDATNN----------FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN  381 (650)
Q Consensus       313 ~~~~~~~~~~~~~----------f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n  381 (650)
                      .+++++++.+++.          |+..++||+|+||.||+|+.. +|+.||||++..........+.+|+.++++++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            4566666666543          666789999999999999875 68999999998766666677899999999999999


Q ss_pred             eeeecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC
Q 006317          382 LVRLLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA  461 (650)
Q Consensus       382 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~  461 (650)
                      |+++++++...+..++||||+++++|.+++.    ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL  176 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence            9999999999999999999999999999875    346999999999999999999999987   999999999999999


Q ss_pred             CCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHH
Q 006317          462 DMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLT  541 (650)
Q Consensus       462 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~  541 (650)
                      ++.+||+|||+++......  .......||+.|+|||++.+..++.++||||||+++|||++|+.|+.....   .....
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~---~~~~~  251 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMK  251 (321)
T ss_dssp             TCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHH
T ss_pred             CCcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHH
Confidence            9999999999998665332  123346799999999999999999999999999999999999999863321   11111


Q ss_pred             HHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          542 YAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       542 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .....         ..+.+.. .......+.+++.+||+.||++|||+.|+++.
T Consensus       252 ~~~~~---------~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          252 RLRDS---------PPPKLKN-SHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHS---------SCCCCTT-GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhcC---------CCCCcCc-cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11111         0111110 00111235567779999999999999999864


No 30 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=3.5e-42  Score=360.13  Aligned_cols=255  Identities=25%  Similarity=0.407  Sum_probs=197.1

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcc----eeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQE----IAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      .++|+..++||+|+||.||+|++. +++.    ||+|.+.... ......+.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            357889999999999999999854 4544    5888875432 344567999999999999999999999998764 78


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +|+||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++..
T Consensus        93 ~v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEECCTTCBHHHHHHH--STTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            99999999999999975  3467999999999999999999999987   999999999999999999999999999877


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .............||..|+|||++.+..++.++||||||+++|||+| |+.||.......   +.........       
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~~~~-------  237 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGER-------  237 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHTTCC-------
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHHHcCCC-------
Confidence            65444334444567889999999999999999999999999999999 999986433222   2221111100       


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                        ...   .......+.+++.+||+.||++||++.||++.|+.
T Consensus       238 --~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  275 (327)
T 3poz_A          238 --LPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             --CCC---CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHH
T ss_pred             --CCC---CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence              001   11122346678889999999999999999998854


No 31 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.5e-42  Score=367.73  Aligned_cols=256  Identities=27%  Similarity=0.476  Sum_probs=194.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc----CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|++.+.||+|+||.||+|+..    ++..||||+++... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            357999999999999999999865    47789999997653 3345579999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus       124 v~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          124 VTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             EEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            9999999999999974  3457999999999999999999999987   9999999999999999999999999998765


Q ss_pred             cCCCCC-ccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          478 MDQSQG-DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       478 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ...... ......+|..|+|||++.+..++.++||||||+++|||++ |+.|+....   ..+..........       
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~---~~~~~~~i~~~~~-------  268 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS---NQDVIKAVDEGYR-------  268 (373)
T ss_dssp             ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC---HHHHHHHHHTTEE-------
T ss_pred             cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCC-------
Confidence            432211 1222345778999999999999999999999999999998 999885322   1222222111110       


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                        .......+   ..+.+++.+||+.||++||++.+|+++|+.
T Consensus       269 --~~~~~~~~---~~l~~li~~cl~~dp~~RPs~~~i~~~L~~  306 (373)
T 2qol_A          269 --LPPPMDCP---AALYQLMLDCWQKDRNNRPKFEQIVSILDK  306 (373)
T ss_dssp             --CCCCTTCB---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCcccc---HHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence              00111122   345677889999999999999999999864


No 32 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.1e-42  Score=371.21  Aligned_cols=257  Identities=26%  Similarity=0.401  Sum_probs=205.3

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ..++|...+.||+|+||.||+|++. +++.||||+++.... .....+.+|+.++++++||||+++++++..++..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3467888999999999999999976 688999999876532 23346889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.....
T Consensus       192 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          192 ELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             ECCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            99999999999975  3456999999999999999999999987   999999999999999999999999999864322


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..........++..|+|||.+.++.++.++||||||+++|||+| |+.|+.....   .........    +..     .
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~---~~~~~~~~~----~~~-----~  334 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN---QQTREFVEK----GGR-----L  334 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH---HHHHHHHHT----TCC-----C
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc----CCC-----C
Confidence            21111222345778999999999999999999999999999999 8888763321   111211111    110     1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ......++   .+.+++.+||+.||++|||+.+|++.|+.
T Consensus       335 ~~~~~~~~---~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          335 PCPELCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            11122333   34567779999999999999999999864


No 33 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=3.1e-42  Score=360.25  Aligned_cols=257  Identities=26%  Similarity=0.460  Sum_probs=203.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc----CCcceeEeecccc-CchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|.+.++||+|+||.||+|++.    .+..||||+++.. .......+.+|+.++++++||||+++++++.+++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            357888999999999999999874    3445999999765 33345579999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus       128 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            9999999999999964  3457999999999999999999999987   9999999999999999999999999998765


Q ss_pred             cCCCCC-ccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          478 MDQSQG-DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       478 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ...... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||.....   .+.........        
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---~~~~~~~~~~~--------  271 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---RDVISSVEEGY--------  271 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH---HHHHHHHHTTC--------
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcCC--------
Confidence            432211 2223456778999999999999999999999999999999 9998853221   12222211110        


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                       ........+.   .+.+++..||+.||++|||+.+|+++|+..
T Consensus       272 -~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          272 -RLPAPMGCPH---ALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             -CCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCCCCCcCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             0111112233   455677899999999999999999999753


No 34 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=8.1e-42  Score=361.84  Aligned_cols=270  Identities=27%  Similarity=0.373  Sum_probs=212.5

Q ss_pred             cccChhhHHhhccCCCcCCcccccCceeEEEeec------cCCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCcee
Q 006317          312 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLV  383 (650)
Q Consensus       312 ~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv  383 (650)
                      ..++........++|++.++||+|+||.||++++      .+++.||||+++.... .....+.+|+.++.++ +||||+
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv   89 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   89 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence            3455666667788999999999999999999973      3467899999976533 3345789999999999 799999


Q ss_pred             eecceeecCC-eeEEEEecCCCCChhHHHHhhhc----------------------------------------------
Q 006317          384 RLLGFSFEET-ERLLIYEFVPNSSVDKFIFDAIK----------------------------------------------  416 (650)
Q Consensus       384 ~l~g~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------  416 (650)
                      ++++++.+.+ ..++||||+++|+|.+++.....                                              
T Consensus        90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            9999988755 48999999999999999975322                                              


Q ss_pred             -----------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          417 -----------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       417 -----------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                                       ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++.....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                             122899999999999999999999987   999999999999999999999999999866544


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..........||+.|+|||++.+..++.++||||||+++|||+| |+.|+.......  ........    ..     ..
T Consensus       247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~----~~-----~~  315 (359)
T 3vhe_A          247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE----GT-----RM  315 (359)
T ss_dssp             TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHHH----TC-----CC
T ss_pred             ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHHHHHc----CC-----CC
Confidence            33334445678999999999999999999999999999999999 999986432211  11111111    10     01


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ........   .+.+++..||+.||++|||+.||++.|+.
T Consensus       316 ~~~~~~~~---~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          316 RAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCH---HHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            11112233   35567779999999999999999999864


No 35 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=7.8e-42  Score=357.41  Aligned_cols=248  Identities=26%  Similarity=0.389  Sum_probs=203.5

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      .++|+..+.||+|+||.||+++. .+|+.||||++....  ......+.+|+.++++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46799999999999999999986 568999999997653  234456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        94 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  167 (328)
T 3fe3_A           94 EYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG  167 (328)
T ss_dssp             CCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred             ECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence            99999999999974   456999999999999999999999987   999999999999999999999999999866432


Q ss_pred             CCCCccceeecCccccChhccccCCCC-ccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFS-IKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                         .......||+.|+|||++.+..++ .++|||||||++|||++|+.||....   ...+.......    .      .
T Consensus       168 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~i~~~----~------~  231 (328)
T 3fe3_A          168 ---GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN---LKELRERVLRG----K------Y  231 (328)
T ss_dssp             ---CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHC----C------C
T ss_pred             ---CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhC----C------C
Confidence               223446799999999999988775 89999999999999999999986332   12222221111    0      1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       232 ~~p~~~s~---~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          232 RIPFYMST---DCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CCCTTSCH---HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CCCCCCCH---HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11111223   34567779999999999999999864


No 36 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=8.2e-43  Score=359.21  Aligned_cols=264  Identities=25%  Similarity=0.425  Sum_probs=201.8

Q ss_pred             ccCCCcCCcccccCceeEEEeec-----cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec--CCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--ETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  395 (650)
                      .++|++.++||+|+||.||++++     .+++.||||++..........+.+|+.++++++||||+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            46788999999999999999984     3578999999987766666789999999999999999999999865  3568


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHH--CGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHh--cccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            999999999999999975  2345999999999999999999999987   99999999999999999999999999987


Q ss_pred             cccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCc---------ccchhHHHHHH
Q 006317          476 FEMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGE---------EAEDLLTYAWK  545 (650)
Q Consensus       476 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~---------~~~~l~~~~~~  545 (650)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||+||..|+.....+         ...........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            6533221 1222345677899999999999999999999999999999999887532110         00000001111


Q ss_pred             hccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          546 NWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       546 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ......     ........++   .+.+++..||+.||++|||+.||++.|+..
T Consensus       244 ~~~~~~-----~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          244 LLKNNG-----RLPRPDGCPD---EIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHTTC-----CCCCCTTCCH---HHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhccC-----cCCCCcCcCH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            111110     0111112333   455677799999999999999999998753


No 37 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=4.2e-41  Score=348.78  Aligned_cols=264  Identities=25%  Similarity=0.444  Sum_probs=201.2

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|...++||+|+||.||+|+..  ..+|+|+++...  ......+.+|+.++++++||||+++++++. .+..++|||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence            468899999999999999999874  358888887542  334457899999999999999999999865 456899999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||++++.+||+|||+++......
T Consensus       112 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~  186 (307)
T 3lb7_A          112 WCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             CCSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred             cCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence            9999999999864  4567999999999999999999999987   9999999999999999999999999998654333


Q ss_pred             CCCccceeecCccccChhccc---cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVT---RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      .........||+.|+|||++.   +..++.++||||||+++|||++|+.||......  .................    
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~----  260 (307)
T 3lb7_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGYASPDLS----  260 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHHTCCCCCST----
T ss_pred             ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH--HHHHHHHhcCCCCcchh----
Confidence            333344567999999999986   567899999999999999999999998643221  11221111211111111    


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCCC
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSLP  604 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~~  604 (650)
                       .+....++   .+.+++..||+.+|++||++.||++.|+.....+|
T Consensus       261 -~~~~~~~~---~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p  303 (307)
T 3lb7_A          261 -KLYKNCPK---AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             -TSCSSSCH---HHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             -hhhcCCcH---HHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence             11112233   45567779999999999999999999886544443


No 38 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.4e-41  Score=344.90  Aligned_cols=257  Identities=26%  Similarity=0.383  Sum_probs=207.8

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      ..++|+..+.||+|+||.||+++..++..||||++..... ...++.+|+.++.+++||||+++++++.++...++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            3467889999999999999999988888999999976543 345789999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      +++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.......
T Consensus        85 ~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           85 ISNGCLLNYLRS--HGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             CTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred             cCCCcHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence            999999999975  3446999999999999999999999987   99999999999999999999999999986543321


Q ss_pred             CCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                       .......+|..|+|||.+.+..++.++||||||+++|||++ |+.|+......   .........    .  .   ...
T Consensus       160 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~----~--~---~~~  226 (268)
T 3sxs_A          160 -VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---EVVLKVSQG----H--R---LYR  226 (268)
T ss_dssp             -EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHTT----C--C---CCC
T ss_pred             -hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH---HHHHHHHcC----C--C---CCC
Confidence             11223346778999999999899999999999999999999 99888633221   111111110    0  0   001


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCC
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSS  600 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~  600 (650)
                      ....++   .+.+++..||+.||++|||+.|+++.|+...
T Consensus       227 ~~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          227 PHLASD---TIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             CTTSCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             CCcChH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            111223   3556777999999999999999999998743


No 39 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.9e-41  Score=355.42  Aligned_cols=252  Identities=20%  Similarity=0.330  Sum_probs=196.4

Q ss_pred             hhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ...++|+..+.||+|+||.||+++. .+|+.||||++..... .....+.+|+.++++++||||+++++++...+..++|
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv   86 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV   86 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence            3457899999999999999999985 4689999999976543 2334688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.....
T Consensus        87 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  160 (347)
T 3zgw_A           87 LEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG  160 (347)
T ss_dssp             EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred             EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence            999999999999874   457999999999999999999999987   99999999999999999999999999876543


Q ss_pred             CCCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....   ...+.......    .      
T Consensus       161 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~---~~~~~~~i~~~----~------  226 (347)
T 3zgw_A          161 NKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN---VMALYKKIMRG----K------  226 (347)
T ss_dssp             ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHT----C------
T ss_pred             CCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcC----C------
Confidence            221 22344679999999999988775 899999999999999999999986322   12222211111    0      


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       227 ~~~p~~~s~---~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          227 YDVPKWLSP---SSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCCCCCCCH---HHHHHHHHHcccCHhHCcCHHHHhcC
Confidence            111122223   34567779999999999999999964


No 40 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=347.36  Aligned_cols=271  Identities=21%  Similarity=0.297  Sum_probs=210.6

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCC--eeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEET--ERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv  398 (650)
                      .++|.+.++||+|+||.||+|+... ++.||||++..... .....+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            4678999999999999999998654 88999999976432 33456889999999999999999999988755  77999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe----CCCCCeEEeeeeccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL----DADMIPKISDFGMAR  474 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~DFGla~  474 (650)
                      |||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+||||    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999986545555999999999999999999999987   9999999999999    888889999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccc--------cCCCCccccccchhHHHHHHHhCCCCCCCCCCcc-cchhHHHHHH
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVT--------RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEE-AEDLLTYAWK  545 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~-~~~l~~~~~~  545 (650)
                      ......   ......||..|+|||++.        +..++.++||||||+++|||++|+.||....... ..........
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            765332   223457999999999986        5788999999999999999999999986433222 2222222222


Q ss_pred             hccCCCccccc---------CccCC--CC-ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          546 NWNEGTALNLI---------DPTLR--NG-SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       546 ~~~~~~~~~~i---------d~~l~--~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ...........         ...+.  .. .......+..++.+||+.||++|||+.|+++.....
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            21111111000         00111  11 233344566788999999999999999999887654


No 41 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=7e-42  Score=359.83  Aligned_cols=264  Identities=25%  Similarity=0.416  Sum_probs=210.3

Q ss_pred             HhhccCCCcCCcccccCceeEEEeecc------CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecC
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEE  392 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  392 (650)
                      ....++|+..+.||+|+||.||+++..      +++.||||+++.... .....+.+|+.++++++||||+++++++.+.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            345678999999999999999999874      347899999976533 3345789999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhc---------------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecC
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIK---------------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRD  451 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD  451 (650)
                      +..++||||+++|+|.+++.....                     ...+++.+++.++.||+.||+|||+++   |+|||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~D  199 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRD  199 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence            999999999999999999975321                     257999999999999999999999987   99999


Q ss_pred             CCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCC
Q 006317          452 LKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSF  530 (650)
Q Consensus       452 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~  530 (650)
                      |||+|||++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |+.|+..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            999999999999999999999987654333233344568899999999999999999999999999999999 9888853


Q ss_pred             CCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          531 RIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       531 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      ..   ..+......    .+..     +......+.   .+.+++.+||+.||++||++.+|++.|+....
T Consensus       280 ~~---~~~~~~~~~----~~~~-----~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          280 MA---HEEVIYYVR----DGNI-----LACPENCPL---ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             SC---HHHHHHHHH----TTCC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CC---hHHHHHHHh----CCCc-----CCCCCCCCH---HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            22   112221111    1111     111122233   45567779999999999999999999987543


No 42 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.2e-41  Score=355.24  Aligned_cols=263  Identities=23%  Similarity=0.387  Sum_probs=192.5

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeeccCCc----ceeEeecccc--CchhHHHHHHHHHHHhhCCCCceeeecceeec
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQ----EIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE  391 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~----~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  391 (650)
                      ++....++|+..+.||+|+||.||+++.....    .||||++...  .......+.+|+.++++++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            34445678999999999999999999875432    7999999765  33445679999999999999999999999987


Q ss_pred             CCee------EEEEecCCCCChhHHHHhhhc---cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC
Q 006317          392 ETER------LLIYEFVPNSSVDKFIFDAIK---RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD  462 (650)
Q Consensus       392 ~~~~------~lv~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~  462 (650)
                      ....      ++||||+++|+|.+++.....   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+++
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED  173 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCC
Confidence            7655      999999999999999975432   225999999999999999999999987   9999999999999999


Q ss_pred             CCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHH
Q 006317          463 MIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLT  541 (650)
Q Consensus       463 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~  541 (650)
                      +.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.|+......   +...
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~  250 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---EIYN  250 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHH
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---HHHH
Confidence            9999999999987654433333334567889999999999999999999999999999999 88888643221   2222


Q ss_pred             HHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          542 YAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       542 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .....    ..     .......+   ..+.+++.+||+.||++|||+.++++.|+.
T Consensus       251 ~~~~~----~~-----~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          251 YLIGG----NR-----LKQPPECM---EEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             HHHTT----CC-----CCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhcC----CC-----CCCCCccC---HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11111    00     11111222   345577789999999999999999999875


No 43 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6e-42  Score=347.86  Aligned_cols=254  Identities=27%  Similarity=0.438  Sum_probs=206.1

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecC
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      .++|+..+.||+|+||.||+++..+++.||+|++..... ...++.+|+.++++++||||+++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            357888999999999999999988888999999976543 3457899999999999999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCC
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQ  482 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~  482 (650)
                      ++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....... 
T Consensus        88 ~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  161 (269)
T 4hcu_A           88 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-  161 (269)
T ss_dssp             TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-
Confidence            99999999964  3456999999999999999999999987   99999999999999999999999999986543211 


Q ss_pred             CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCC
Q 006317          483 GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLR  561 (650)
Q Consensus       483 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~  561 (650)
                      .......+|..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   .+.........         .+...
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~---~~~~~~~~~~~---------~~~~~  229 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVVEDISTGF---------RLYKP  229 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHHTTC---------CCCCC
T ss_pred             ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHhcCc---------cCCCC
Confidence            11223456778999999999999999999999999999999 8888863221   12221111110         11111


Q ss_pred             CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          562 NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       562 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ...+.   .+.+++..||+.||++|||+.|+++.|+.
T Consensus       230 ~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          230 RLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             TTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcCCH---HHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            11223   35567779999999999999999999864


No 44 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.6e-41  Score=351.82  Aligned_cols=254  Identities=24%  Similarity=0.371  Sum_probs=201.7

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|++.++||+|+||.||+++.. +++.||||++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            367999999999999999999865 688999999865433 233468899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+....
T Consensus        86 ~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  159 (323)
T 3tki_A           86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (323)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             cCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence            999999999886   3456999999999999999999999987   9999999999999999999999999998765443


Q ss_pred             CCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      .........||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... .....  +...  ...   ..+ 
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~--~~~~--~~~---~~~-  230 (323)
T 3tki_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSD--WKEK--KTY---LNP-  230 (323)
T ss_dssp             EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHH--HHTT--CTT---STT-
T ss_pred             cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHH--Hhcc--ccc---CCc-
Confidence            3333445689999999999988775 789999999999999999999986433221 11111  1110  000   000 


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                          .......+.+++.+||+.||++|||+.|+++.
T Consensus       231 ----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          231 ----WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ----cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                01112344567789999999999999999865


No 45 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-41  Score=361.89  Aligned_cols=258  Identities=29%  Similarity=0.466  Sum_probs=206.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc------CCcceeEeecccc-CchhHHHHHHHHHHHhhCCCCceeeecceeecCCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  395 (650)
                      .++|...++||+|+||.||+|++.      +++.||||++... .......+.+|+.++++++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            467889999999999999999853      3568999999754 334455788999999999999999999999999999


Q ss_pred             EEEEecCCCCChhHHHHhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC---CeEEe
Q 006317          396 LLIYEFVPNSSVDKFIFDAIK----RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM---IPKIS  468 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~  468 (650)
                      ++||||+++|+|.+++.....    ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            999999999999999976421    245999999999999999999999997   99999999999999555   59999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhc
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      |||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.|+....   ..++....... 
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~---~~~~~~~i~~~-  302 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSG-  302 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHHHHTT-
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcC-
Confidence            9999986544333333444568999999999999999999999999999999998 888886332   22222222111 


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                         ..     .......+.   .+.+++.+||+.||++|||+.+|++.|+.
T Consensus       303 ---~~-----~~~~~~~~~---~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          303 ---GR-----MDPPKNCPG---PVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             ---CC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CC-----CCCCccCCH---HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence               10     111112233   35567789999999999999999999864


No 46 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.3e-41  Score=371.53  Aligned_cols=264  Identities=25%  Similarity=0.407  Sum_probs=205.7

Q ss_pred             hhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ...++|...++||+|+||.||+|++.++..||||+++.... ...+|.+|+.+|++++||||+++++++.+ +..++|||
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence            34567888999999999999999998888899999976543 34579999999999999999999999876 67899999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++......
T Consensus       259 ~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  334 (452)
T 1fmk_A          259 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE  334 (452)
T ss_dssp             CCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             hhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence            99999999999643 2356999999999999999999999987   9999999999999999999999999998664322


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      . .......++..|+|||.+.++.++.++||||||+++|||++ |+.|+....   ..+..........         ..
T Consensus       335 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~---~~~~~~~i~~~~~---------~~  401 (452)
T 1fmk_A          335 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV---NREVLDQVERGYR---------MP  401 (452)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---HHHHHHHHHTTCC---------CC
T ss_pred             e-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCC---------CC
Confidence            1 12223456889999999999999999999999999999999 888875322   1122222211110         11


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCCCCC
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSLPLP  606 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~~~p  606 (650)
                      .....++   .+.+++.+||+.||++|||+.+|+++|+.......+.
T Consensus       402 ~~~~~~~---~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~  445 (452)
T 1fmk_A          402 CPPECPE---SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  445 (452)
T ss_dssp             CCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             CCCCCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence            1112233   4556778999999999999999999998865544433


No 47 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-41  Score=358.03  Aligned_cols=263  Identities=25%  Similarity=0.347  Sum_probs=207.3

Q ss_pred             hhccCCCcCCcccccCceeEEEeec------cCCcceeEeeccccC-chhHHHHHHHHHHHhhC-CCCceeeecceeecC
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEE  392 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  392 (650)
                      ...++|...+.||+|+||.||+++.      .++..||||++.... ......+.+|+.++.++ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            3457899999999999999999985      235679999997543 23345789999999999 899999999999999


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhcc--------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCC
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIKR--------------------VQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDL  452 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl  452 (650)
                      +..++||||+++|+|.+++......                    ..+++..++.++.||+.||+|||+.+   |+||||
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di  198 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDL  198 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTC
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence            9999999999999999999753221                    34899999999999999999999987   999999


Q ss_pred             CCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCC
Q 006317          453 KASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFR  531 (650)
Q Consensus       453 k~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~  531 (650)
                      ||+||||+.++.+||+|||++................||+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999999999987654433333445667889999999999999999999999999999998 99888643


Q ss_pred             CCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCC
Q 006317          532 IGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSS  600 (650)
Q Consensus       532 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~  600 (650)
                      ....  .........         ..+......++   .+.+++.+||+.||.+|||+.||++.|+...
T Consensus       279 ~~~~--~~~~~~~~~---------~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          279 PVDA--NFYKLIQNG---------FKMDQPFYATE---EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             CCSH--HHHHHHHTT---------CCCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CcHH--HHHHHHhcC---------CCCCCCCCCCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            2211  111111111         01111112233   4556777999999999999999999997643


No 48 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.2e-41  Score=372.11  Aligned_cols=261  Identities=26%  Similarity=0.416  Sum_probs=209.5

Q ss_pred             HHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          319 IRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       319 ~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .+...++|...++||+|+||.||+|+++++..||||+++... .....|.+|+.+|++++||||+++++++. .+..++|
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            344567889999999999999999999888899999998654 34568999999999999999999999986 5678999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus       261 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             ECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            9999999999999753 2346899999999999999999999987   99999999999999999999999999986542


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ... .......+|..|+|||++..+.++.++||||||+++|||+| |+.|+....   ..+..........         
T Consensus       337 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~---~~~~~~~i~~~~~---------  403 (454)
T 1qcf_A          337 NEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS---NPEVIRALERGYR---------  403 (454)
T ss_dssp             HHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHHHHHTCC---------
T ss_pred             Cce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCC---------
Confidence            211 11122346788999999999999999999999999999999 999886322   1222222211111         


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      .......++   .+.+++.+||+.||++|||+.+|+++|+....
T Consensus       404 ~~~~~~~~~---~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          404 MPRPENCPE---ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCCCH---HHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            011112233   45567789999999999999999999987543


No 49 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.8e-40  Score=344.69  Aligned_cols=263  Identities=22%  Similarity=0.327  Sum_probs=200.8

Q ss_pred             hhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCch--hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ...++|+..++||+|+||.||+++..+|+.||||++......  ....+.+|+.++++++||||+++++++.++...++|
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            345789999999999999999999888999999999754322  235688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++ +|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           98 FEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             EECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             EcCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            999985 78887764  3456999999999999999999999987   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC---ccc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT---ALN  554 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~  554 (650)
                      ..  .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.   +...........   ...
T Consensus       172 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~  246 (311)
T 3niz_A          172 PV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQ  246 (311)
T ss_dssp             CC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGG
T ss_pred             Cc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhh
Confidence            22  22334578999999999876 5689999999999999999999999875433322   111111111100   000


Q ss_pred             c---------cCccCCCCCh-----HHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          555 L---------IDPTLRNGSS-----SEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       555 ~---------id~~l~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .         ..........     ....++.+++.+||+.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0         0000000011     11134567888999999999999999985


No 50 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.6e-40  Score=342.24  Aligned_cols=259  Identities=24%  Similarity=0.392  Sum_probs=202.2

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|++.+.||+|+||.||+++.. +++.||+|++.....   .....+.+|+.++.+++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            467999999999999999999854 588999999855432   3345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        90 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            999999999999974   457999999999999999999999987   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .. ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.....      ............ .. ...
T Consensus       164 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~-~~-~~~  234 (294)
T 4eqm_A          164 TS-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSV-PN-VTT  234 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCC-CC-HHH
T ss_pred             cc-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccC-CC-cch
Confidence            22 1223346799999999999999999999999999999999999999863221      111111111110 00 001


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCC-CHHHHHHHhcCC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRP-TMASVVVMLNSS  599 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-t~~evl~~L~~~  599 (650)
                      ......++   .+.+++.+||+.||++|| ++.++.+.|...
T Consensus       235 ~~~~~~~~---~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          235 DVRKDIPQ---SLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HSCTTSCH---HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             hcccCCCH---HHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence            11122223   355677799999999998 999999999764


No 51 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.6e-41  Score=350.87  Aligned_cols=259  Identities=27%  Similarity=0.361  Sum_probs=208.0

Q ss_pred             hccCCCcCCcccccCceeEEEeec------cCCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      ..++|...+.||+|+||.||+++.      .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            457889999999999999999975      235789999997653 3344578999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhc---------------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCC
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIK---------------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLK  453 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  453 (650)
                      .++||||+++++|.+++.....                     ...+++..++.++.||+.||+|||+++   |+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence            9999999999999999976322                     234899999999999999999999987   9999999


Q ss_pred             CCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCC
Q 006317          454 ASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRI  532 (650)
Q Consensus       454 ~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~  532 (650)
                      |+|||+++++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.|+....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999987654333323334567889999999999999999999999999999999 998886433


Q ss_pred             CcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          533 GEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       533 ~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..   .+.......    .     .+......++   .+.+++.+||+.||++||++.||++.|+.
T Consensus       258 ~~---~~~~~~~~~----~-----~~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          258 PE---RLFNLLKTG----H-----RMERPDNCSE---EMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             GG---GHHHHHHTT----C-----CCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH---HHHHHhhcC----C-----cCCCCccCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            22   222211111    0     0111122233   45567779999999999999999999864


No 52 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.2e-41  Score=359.77  Aligned_cols=260  Identities=25%  Similarity=0.357  Sum_probs=209.2

Q ss_pred             hccCCCcCCcccccCceeEEEeecc--------CCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCceeeecceeec
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLVRLLGFSFE  391 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  391 (650)
                      ..++|.+.++||+|+||.||+++..        .+..||||++..... .....+.+|+++++++ +||||+++++++..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3468889999999999999999852        235799999976533 3345789999999999 99999999999999


Q ss_pred             CCeeEEEEecCCCCChhHHHHhhhc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceE
Q 006317          392 ETERLLIYEFVPNSSVDKFIFDAIK-------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL  458 (650)
Q Consensus       392 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL  458 (650)
                      ++..++||||+++|+|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence            9999999999999999999975321             245999999999999999999999987   999999999999


Q ss_pred             eCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccc
Q 006317          459 LDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAE  537 (650)
Q Consensus       459 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~  537 (650)
                      |++++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||++ |+.|+....   ..
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~---~~  300 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---VE  300 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---HH
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---HH
Confidence            99999999999999987654433334444567889999999999999999999999999999999 988886322   12


Q ss_pred             hhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          538 DLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       538 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ++.......    ..     .........   .+.+++.+||+.||++|||+.||++.|+..
T Consensus       301 ~~~~~~~~~----~~-----~~~~~~~~~---~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          301 ELFKLLKEG----HR-----MDKPSNCTN---ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             HHHHHHHTT----CC-----CCCCSSCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcC----CC-----CCCCccCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            222222111    10     111112233   455677799999999999999999999764


No 53 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.3e-41  Score=346.12  Aligned_cols=256  Identities=24%  Similarity=0.379  Sum_probs=204.4

Q ss_pred             hhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ...++|+..+.||+|+||.||++...++..||||++..... ...++.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            34568899999999999999999998888999999976543 34578999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A          100 YMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             CCTTCBHHHHHHC--GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             ccCCCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            9999999999975  2456999999999999999999999987   9999999999999999999999999998654321


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      . .......+|..|+|||.+.+..++.++||||||+++|||+| |+.||......   .........         ....
T Consensus       175 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~---------~~~~  241 (283)
T 3gen_A          175 Y-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEHIAQG---------LRLY  241 (283)
T ss_dssp             H-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHTT---------CCCC
T ss_pred             c-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHHHhcc---------cCCC
Confidence            1 11222346788999999999999999999999999999999 99888633211   111111111         0111


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .....++   .+.+++.+||+.||++|||+.++++.|..
T Consensus       242 ~~~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          242 RPHLASE---KVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             CCTTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcCCH---HHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            1111223   45567789999999999999999999864


No 54 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.5e-41  Score=375.17  Aligned_cols=257  Identities=27%  Similarity=0.430  Sum_probs=208.4

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ...+|...++||+|+||.||+|++.. +..||||+++.... ...+|.+|+.+|++++||||+++++++......++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34678888999999999999999765 78999999976543 35679999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++......
T Consensus       297 ~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          297 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             ccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            99999999999753 3456999999999999999999999987   9999999999999999999999999998764322


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      . .......++..|+|||++.+..++.++||||||+++|||+| |+.|+.....   ............         ..
T Consensus       373 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~---------~~  439 (495)
T 1opk_A          373 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLEKDYR---------ME  439 (495)
T ss_dssp             E-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---GGHHHHHHTTCC---------CC
T ss_pred             e-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCC---------CC
Confidence            1 12223456788999999999999999999999999999999 8888764322   222222211110         11


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      .....+.   .+.+|+.+||+.||++|||+.+|+++|+..
T Consensus       440 ~~~~~~~---~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          440 RPEGCPE---KVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCH---HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            1112233   445677799999999999999999999864


No 55 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.2e-40  Score=347.47  Aligned_cols=248  Identities=22%  Similarity=0.246  Sum_probs=202.6

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|+..+.||+|+||.||+++.. +|+.||||++++..   ......+.+|+.++++++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            57889999999999999999865 58899999997642   233456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|..++..   ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++.....
T Consensus        85 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           85 EYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             ECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            99999999999873   457999999999999999999999987   999999999999999999999999999753322


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                        ........||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...+......   .       ...
T Consensus       159 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~~~~~i~~---~-------~~~  223 (337)
T 1o6l_A          159 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HERLFELILM---E-------EIR  223 (337)
T ss_dssp             --TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHH---C-------CCC
T ss_pred             --CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC---HHHHHHHHHc---C-------CCC
Confidence              223445689999999999999999999999999999999999999986322   1122221111   0       011


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~  595 (650)
                      +......   .+.+++.+||+.||++||     ++.||++.
T Consensus       224 ~p~~~s~---~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          224 FPRTLSP---EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CCTTSCH---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCCCH---HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            1122233   345667799999999999     89999854


No 56 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=3e-41  Score=352.91  Aligned_cols=253  Identities=21%  Similarity=0.351  Sum_probs=198.1

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCC-------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEET-------  393 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------  393 (650)
                      .++|+..+.||+|+||.||+++.. +|+.||||++..... .....+.+|+.++++++||||+++++++.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            357889999999999999999975 689999999975433 34567899999999999999999999886543       


Q ss_pred             --------------------------------------------------eeEEEEecCCCCChhHHHHhhhccCCCCHH
Q 006317          394 --------------------------------------------------ERLLIYEFVPNSSVDKFIFDAIKRVQLDWE  423 (650)
Q Consensus       394 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~  423 (650)
                                                                        ..++||||+++++|.+++..........+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              278999999999999999865455567888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCC----------CccceeecCcc
Q 006317          424 TRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQ----------GDTSRIVGTFG  493 (650)
Q Consensus       424 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~  493 (650)
                      .++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++........          .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            89999999999999999987   999999999999999999999999999876543211          12234579999


Q ss_pred             ccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHH
Q 006317          494 YMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVH  573 (650)
Q Consensus       494 y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~  573 (650)
                      |+|||++.+..++.++||||||+++|||++|..|+.        +..... ......        ............+.+
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~  304 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVRII-TDVRNL--------KFPLLFTQKYPQEHM  304 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHHHH-HHHHTT--------CCCHHHHHHCHHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHHHH-HHhhcc--------CCCcccccCChhHHH
Confidence            999999999999999999999999999999876532        111111 000000        011011222345567


Q ss_pred             HHhcccccCCCCCCCHHHHHHH
Q 006317          574 IGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       574 l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ++.+||+.||++|||+.|+++.
T Consensus       305 li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHccCCCCcCCCHHHHhhc
Confidence            8889999999999999999864


No 57 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1e-40  Score=353.20  Aligned_cols=252  Identities=25%  Similarity=0.327  Sum_probs=203.2

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch------hHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      ..+.|++.+.||+|+||.||+++.. +|+.||||++.+....      ....+.+|+.++++++||||+++++++.+...
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            4567999999999999999999865 5889999999765332      24578999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC----CeEEeee
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM----IPKISDF  470 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DF  470 (650)
                      .++||||+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++    .+||+||
T Consensus        90 ~~lv~e~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           90 VVLILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             EEEEEECCCSCBHHHHHT---TCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            999999999999999986   3567999999999999999999999987   99999999999998887    7999999


Q ss_pred             ecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          471 GMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       471 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      |+++......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...........    
T Consensus       164 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~---~~~~~~~i~~~----  233 (361)
T 2yab_A          164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANITAV----  233 (361)
T ss_dssp             SSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHHHTT----
T ss_pred             CCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhc----
Confidence            9998765322   2334679999999999999999999999999999999999999986322   11222111110    


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..  .+++.......   ..+.+++..||+.||++|||+.|+++
T Consensus       234 ~~--~~~~~~~~~~s---~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          234 SY--DFDEEFFSQTS---ELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CC--CCCHHHHTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CC--CCCchhccCCC---HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00  00000001122   23456777999999999999999985


No 58 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.2e-41  Score=352.89  Aligned_cols=267  Identities=25%  Similarity=0.409  Sum_probs=212.7

Q ss_pred             ChhhHHhhccCCCcCCcccccCceeEEEeecc------CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecc
Q 006317          315 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLG  387 (650)
Q Consensus       315 ~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g  387 (650)
                      ..++.+...++|...+.||+|+||.||+|+..      .++.||||++..... .....+.+|+.++++++||||+++++
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            34455566788999999999999999999764      367899999976533 34456899999999999999999999


Q ss_pred             eeecCCeeEEEEecCCCCChhHHHHhhhc-------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC
Q 006317          388 FSFEETERLLIYEFVPNSSVDKFIFDAIK-------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD  460 (650)
Q Consensus       388 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~  460 (650)
                      ++.+.+..++||||+++|+|.+++.....       ...+++..++.++.||+.||+|||+++   |+||||||+||||+
T Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~  172 (322)
T 1p4o_A           96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA  172 (322)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEEC
T ss_pred             EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEc
Confidence            99999999999999999999999975322       146799999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchh
Q 006317          461 ADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDL  539 (650)
Q Consensus       461 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l  539 (650)
                      .++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.|+....   ....
T Consensus       173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~  249 (322)
T 1p4o_A          173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---NEQV  249 (322)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---HHHH
T ss_pred             CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC---HHHH
Confidence            999999999999986654333223334567889999999999999999999999999999999 788775322   1122


Q ss_pred             HHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          540 LTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       540 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ......    ...     +......+.   .+.+++.+||+.||++|||+.|+++.|+..
T Consensus       250 ~~~~~~----~~~-----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          250 LRFVME----GGL-----LDKPDNCPD---MLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HHHHHT----TCC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHc----CCc-----CCCCCCCCH---HHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            221111    111     011112233   345677799999999999999999999864


No 59 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-41  Score=350.63  Aligned_cols=253  Identities=19%  Similarity=0.262  Sum_probs=204.1

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|.+.+.||+|+||.||+++.. +++.+|+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            3578999999999999999999865 47889999987543 344568899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC--CCCeEEeeeeccccccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA--DMIPKISDFGMARLFEM  478 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~  478 (650)
                      |+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+++.+..
T Consensus        82 ~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           82 FISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             eCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            9999999999863  3346999999999999999999999987   999999999999997  78999999999987643


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .   .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .............      .+.
T Consensus       157 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~~~------~~~  224 (321)
T 1tki_A          157 G---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQIIENIMNAEYT------FDE  224 (321)
T ss_dssp             T---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHHTCCC------CCH
T ss_pred             C---CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHcCCCC------CCh
Confidence            2   233456799999999999988899999999999999999999999863321   2222221111000      000


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       225 ~~~~~~s---~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          225 EAFKEIS---IEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHTTSC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hhhccCC---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0001112   345577889999999999999999974


No 60 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2.1e-41  Score=354.87  Aligned_cols=264  Identities=25%  Similarity=0.354  Sum_probs=209.1

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeeccC-C-----cceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCceeeeccee
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH-G-----QEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLVRLLGFS  389 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~-g-----~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~  389 (650)
                      ..+...++|...+.||+|+||.||++.... +     ..||+|++..... .....+.+|+.++.++ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            344456789999999999999999998543 2     3699999976533 3445689999999999 899999999999


Q ss_pred             ecCCeeEEEEecCCCCChhHHHHhhhc-----------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceE
Q 006317          390 FEETERLLIYEFVPNSSVDKFIFDAIK-----------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL  458 (650)
Q Consensus       390 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL  458 (650)
                      ...+..++||||+++|+|.+++.....           ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence            999999999999999999999975321           346899999999999999999999987   999999999999


Q ss_pred             eCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccc
Q 006317          459 LDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAE  537 (650)
Q Consensus       459 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~  537 (650)
                      |+.++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||+| |..|+.......  
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--  274 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--  274 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--
Confidence            99999999999999986654433333344567889999999999999999999999999999999 888876332211  


Q ss_pred             hhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          538 DLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       538 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..........         ........+.   .+.+++..||+.||.+|||+.||++.|+.
T Consensus       275 ~~~~~~~~~~---------~~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          275 KFYKLVKDGY---------QMAQPAFAPK---NIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             HHHHHHHHTC---------CCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCC---------CCCCCCCCCH---HHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            1111111111         0111111223   45567779999999999999999999864


No 61 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1e-40  Score=349.39  Aligned_cols=258  Identities=16%  Similarity=0.190  Sum_probs=206.6

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|+..+.||+|+||.||+|+. .+++.||||++......  ..+.+|+.+++++ +||||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS--CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46789999999999999999985 56889999998754322  3578999999999 99999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC-----eEEeeeecccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI-----PKISDFGMARL  475 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~DFGla~~  475 (650)
                      |+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.     +||+|||+++.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            99 99999998752  467999999999999999999999987   999999999999999887     99999999987


Q ss_pred             cccCCCCC-----ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          476 FEMDQSQG-----DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       476 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      +.......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            65433211     1345689999999999999999999999999999999999999997544333322222211110000


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhc
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLN  597 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~  597 (650)
                       ..    ..+....+    ++.+++..||+.||.+||++.+|++.|+
T Consensus       240 -~~----~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~  277 (330)
T 2izr_A          240 -PI----EVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFT  277 (330)
T ss_dssp             -CH----HHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             -CH----HHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence             00    00111122    5667788999999999999999999885


No 62 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=8.7e-42  Score=357.07  Aligned_cols=265  Identities=25%  Similarity=0.388  Sum_probs=206.6

Q ss_pred             cCCCcCCcccccCceeEEEeec-----cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceee--cCCeeE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF--EETERL  396 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~  396 (650)
                      ++|+..+.||+|+||.||++++     .+++.||||++..........+.+|+.++++++||||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            6788999999999999999983     357889999998776666677999999999999999999999886  456688


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++..
T Consensus       103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            999999999999999752  346999999999999999999999987   999999999999999999999999999876


Q ss_pred             ccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc--------chhHHHHHHhc
Q 006317          477 EMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA--------EDLLTYAWKNW  547 (650)
Q Consensus       477 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~--------~~l~~~~~~~~  547 (650)
                      ...... .......||..|+|||++.+..++.++||||||+++|||++|+.|+.....+..        ...........
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence            533221 122334678889999999999999999999999999999999998753211100        00000000100


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      ..+.     ........+   ..+.+++.+||+.||++|||+.||++.|+....
T Consensus       258 ~~~~-----~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          258 EEGQ-----RLPAPPACP---AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HTTC-----CCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hccc-----CCCCCCccc---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            0000     011111223   345567779999999999999999999986544


No 63 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.7e-41  Score=351.68  Aligned_cols=244  Identities=20%  Similarity=0.341  Sum_probs=199.4

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      -++|.+.+.||+|+||.||+++. .+++.||||++.....   .....+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36789999999999999999986 5688999999865422   2234688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+ +|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.....
T Consensus        88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            9999 7889888864   457999999999999999999999998   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........                .+.+.
T Consensus       161 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~  221 (336)
T 3h4j_B          161 GN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVN  221 (336)
T ss_dssp             SB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCC
T ss_pred             Cc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHH
Confidence            22   2334579999999999988776 7899999999999999999999863321111                11111


Q ss_pred             ---ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 ---PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ---~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                         ..+....+.   .+.+++.+||+.||.+|||+.|+++.
T Consensus       222 ~~~~~~p~~~s~---~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          222 SCVYVMPDFLSP---GAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             SSCCCCCTTSCH---HHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             cCCCCCcccCCH---HHHHHHHHHcCCChhHCcCHHHHHhC
Confidence               111122233   34567779999999999999999854


No 64 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=9.1e-41  Score=344.60  Aligned_cols=260  Identities=24%  Similarity=0.350  Sum_probs=197.9

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhh--CCCCceeeecceeec----CCee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFE----ETER  395 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~----~~~~  395 (650)
                      ..++|+..++||+|+||.||+|+. +++.||||++...   ....+..|.+++..  ++||||+++++++..    ....
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            457899999999999999999988 6899999998654   23345566666665  799999999998654    3457


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCcEEecCCCCCceEeCCCCCeEE
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLH--------EDSRLRIIHRDLKASNILLDADMIPKI  467 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILl~~~~~~kl  467 (650)
                      ++||||+++|+|.+++.    ...+++..++.++.||+.||+|||        +.+   |+||||||+||||+.++.+||
T Consensus        82 ~lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             EEEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEE
T ss_pred             EEehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEE
Confidence            89999999999999984    357999999999999999999999        555   999999999999999999999


Q ss_pred             eeeecccccccCCCCC--ccceeecCccccChhccccC------CCCccccccchhHHHHHHHhC----------CCCCC
Q 006317          468 SDFGMARLFEMDQSQG--DTSRIVGTFGYMAPEYVTRG------HFSIKSDVFSFGVLVLEIISG----------QKNNS  529 (650)
Q Consensus       468 ~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~sDV~S~Gvll~elltG----------~~p~~  529 (650)
                      +|||+++.........  ......||+.|+|||++.+.      .++.++||||||+++|||+||          +.||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            9999998665332211  12334799999999999876      455799999999999999999          66664


Q ss_pred             CCCCcccchhHHHHHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          530 FRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       530 ~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ........  ............    ..+.+...  .......+.+++.+||+.||++|||+.||+++|+.
T Consensus       235 ~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          235 DVVPNDPS--FEDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TTSCSSCC--HHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCCCCcc--hhhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            32221111  111111111110    11111111  12344667788999999999999999999999874


No 65 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=9.9e-41  Score=364.47  Aligned_cols=250  Identities=27%  Similarity=0.422  Sum_probs=201.8

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCC-eeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEET-ERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~e  400 (650)
                      ..++|+..++||+|+||.||+|.+. |+.||||+++...  ....|.+|+.+|++++||||+++++++.+.. ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3467888999999999999999884 7899999997654  4457899999999999999999999987765 7899999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++..... 
T Consensus       268 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-  342 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  342 (450)
T ss_dssp             CCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             ecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence            99999999999753 2334799999999999999999999987   999999999999999999999999999854321 


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                          .....++..|+|||++.+..++.++||||||+++|||+| |+.|+......+   .........         ...
T Consensus       343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i~~~~---------~~~  406 (450)
T 1k9a_A          343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKGY---------KMD  406 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHHHHTTC---------CCC
T ss_pred             ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC---------CCC
Confidence                122357889999999999999999999999999999999 999886433222   222211111         011


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .....+.   .+.+++..||+.||++|||+.+|++.|+.
T Consensus       407 ~p~~~~~---~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          407 APDGCPP---AVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             CCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1122333   34567779999999999999999999875


No 66 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.8e-41  Score=349.44  Aligned_cols=260  Identities=26%  Similarity=0.373  Sum_probs=208.4

Q ss_pred             hccCCCcCCcccccCceeEEEeec------cCCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCceeeecceeecCC
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLVRLLGFSFEET  393 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  393 (650)
                      ..++|...+.||+|+||.||+++.      .+++.||||++..... .....+.+|+.++.++ +||||+++++++...+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            456889999999999999999974      3467899999976543 3445789999999999 9999999999999999


Q ss_pred             eeEEEEecCCCCChhHHHHhhhc---------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceE
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIK---------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL  458 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL  458 (650)
                      ..++||||+++|+|.+++.....               ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence            99999999999999999975321               125899999999999999999999987   999999999999


Q ss_pred             eCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccc
Q 006317          459 LDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAE  537 (650)
Q Consensus       459 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~  537 (650)
                      ++.++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||+| |+.|+.......  
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--  255 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--  255 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence            99999999999999987654433333344567889999999999999999999999999999999 888876432211  


Q ss_pred             hhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          538 DLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       538 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..........         ........+.   .+.+++.+||+.||.+|||+.||+++|+.
T Consensus       256 ~~~~~~~~~~---------~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          256 KFYKMIKEGF---------RMLSPEHAPA---EMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             HHHHHHHHTC---------CCCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhccCC---------CCCCcccCCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            1111111111         1111112233   45567779999999999999999999975


No 67 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.2e-40  Score=344.26  Aligned_cols=252  Identities=25%  Similarity=0.339  Sum_probs=202.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch------hHHHHHHHHHHHhhCCCCceeeecceeecCCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQHRNLVRLLGFSFEETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  395 (650)
                      .+.|...+.||+|+||.||+++.. +|+.||||++......      ....+.+|+.++++++||||+++++++.+....
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            457889999999999999999865 5889999998765322      356789999999999999999999999999999


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC----CeEEeeee
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM----IPKISDFG  471 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DFG  471 (650)
                      ++||||+++++|.+++.   ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        90 ~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           90 ILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEEECCCSCBHHHHHT---TSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCCCHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            99999999999999986   3467999999999999999999999987   99999999999999888    89999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT  551 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  551 (650)
                      +++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ...........  ..
T Consensus       164 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~~~~~~--~~  235 (326)
T 2y0a_A          164 LAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---QETLANVSAVN--YE  235 (326)
T ss_dssp             TCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHHHTC--CC
T ss_pred             CCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH---HHHHHHHHhcC--CC
Confidence            998764322   23345799999999999999999999999999999999999999863221   11221111110  00


Q ss_pred             cccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          552 ALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       552 ~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                          +........+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       236 ----~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          236 ----FEDEYFSNTS---ALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             ----CCHHHHTTSC---HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ----cCccccccCC---HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                0000001112   234567779999999999999999864


No 68 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=4e-41  Score=351.80  Aligned_cols=255  Identities=26%  Similarity=0.358  Sum_probs=198.9

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcc----eeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQE----IAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ++|+..++||+|+||.||+|+.. +++.    ||+|.+.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            57888999999999999999854 4554    6777765432 222345778999999999999999999886 566899


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..  .+..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQ--HRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEECCTTCBSHHHHHS--SGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEeCCCCCHHHHHHH--ccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence            9999999999999874  2457999999999999999999999987   9999999999999999999999999999876


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ............||..|+|||++.+..++.++||||||+++|||+| |+.||.......   ........    ...   
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~----~~~---  236 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLEKG----ERL---  236 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHHTT----CBC---
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHHcC----CCC---
Confidence            5544444455678889999999999999999999999999999999 999986433222   22111111    000   


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                        ........   .+.+++.+||+.||++||++.||++.|+..
T Consensus       237 --~~~~~~~~---~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          237 --AQPQICTI---DVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             --CCCTTBCT---TTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             --CCCCcCcH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              00011111   244677799999999999999999998753


No 69 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.3e-40  Score=341.52  Aligned_cols=252  Identities=23%  Similarity=0.367  Sum_probs=202.0

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-C-------cceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-G-------QEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      .++|...+.||+|+||.||+|+... +       ..||+|++..........+.+|+.++++++||||+++++++.+.+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            3578889999999999999998653 3       4699999987666667789999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC--------eE
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI--------PK  466 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--------~k  466 (650)
                      .++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.        +|
T Consensus        87 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CEEEEECCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceee
Confidence            9999999999999999975  3345999999999999999999999987   999999999999999887        99


Q ss_pred             EeeeecccccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHH
Q 006317          467 ISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWK  545 (650)
Q Consensus       467 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~  545 (650)
                      |+|||++....      ......||..|+|||++.+ ..++.++||||||+++|||++|..|+......  ....... .
T Consensus       162 l~Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~~~-~  232 (289)
T 4fvq_A          162 LSDPGISITVL------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQFY-E  232 (289)
T ss_dssp             ECCCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHH-H
T ss_pred             eccCccccccc------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHHHh-h
Confidence            99999986442      1233568999999999987 77999999999999999999976554322111  1111111 1


Q ss_pred             hccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          546 NWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       546 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      .  .        ..+......   .+.+++.+||+.||++|||+.|+++.|+....
T Consensus       233 ~--~--------~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          233 D--R--------HQLPAPKAA---ELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             T--T--------CCCCCCSSC---TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             c--c--------CCCCCCCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            0  0        011111122   24567779999999999999999999987543


No 70 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.1e-40  Score=354.30  Aligned_cols=265  Identities=17%  Similarity=0.215  Sum_probs=202.7

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC------CcceeEeeccccCchhH-----------HHHHHHHHHHhhCCCCceee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGE-----------LEFKNEVLLVARLQHRNLVR  384 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~  384 (650)
                      ..++|.+.++||+|+||.||+|.+..      ++.||||++........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            45689999999999999999998754      47899999876542211           12345666778889999999


Q ss_pred             ecceeecC----CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC
Q 006317          385 LLGFSFEE----TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD  460 (650)
Q Consensus       385 l~g~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~  460 (650)
                      +++++...    ...+|||||+ +++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence            99998764    4579999999 9999999875  3467999999999999999999999987   99999999999999


Q ss_pred             --CCCCeEEeeeecccccccCCCCC-----ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCC
Q 006317          461 --ADMIPKISDFGMARLFEMDQSQG-----DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIG  533 (650)
Q Consensus       461 --~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~  533 (650)
                        .++.+||+|||+++.+.......     ......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              88999999999998765432211     12335699999999999999999999999999999999999999874222


Q ss_pred             cccchhHHHHHHhccCCCcccccCccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          534 EEAEDLLTYAWKNWNEGTALNLIDPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       534 ~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..  .........+ .....+++++.+. ...+.+   +.+++..||+.+|++||++.+|+++|+.
T Consensus       267 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          267 DP--KYVRDSKIRY-RENIASLMDKCFPAANAPGE---IAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             CH--HHHHHHHHHH-HHCHHHHHHHHSCTTCCCHH---HHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             CH--HHHHHHHHHh-hhhHHHHHHHhcccccCHHH---HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            21  1111111111 1122333444332 223444   4456668999999999999999999865


No 71 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-40  Score=356.03  Aligned_cols=265  Identities=20%  Similarity=0.226  Sum_probs=206.1

Q ss_pred             ccChhhHHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch---hHHHHHHHHHHHhhCCCCceeeecce
Q 006317          313 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGF  388 (650)
Q Consensus       313 ~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~  388 (650)
                      .+.+++++...++|+..++||+|+||.||+++.+ +|+.||||++.+....   ....+.+|..++.+++||||++++++
T Consensus        50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            3455666677889999999999999999999875 5899999999754221   22347889999999999999999999


Q ss_pred             eecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          389 SFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       389 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                      +.+.+..+|||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++++||+
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~  204 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSK--FGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLA  204 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHH--HSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEe
Confidence            9999999999999999999999974  2347999999999999999999999987   9999999999999999999999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhccc-------cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHH
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVT-------RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLT  541 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~  541 (650)
                      |||+++....... .......||+.|+|||++.       ...++.++|||||||++|||++|+.||......   +...
T Consensus       205 DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~  280 (412)
T 2vd5_A          205 DFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA---ETYG  280 (412)
T ss_dssp             CCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH
T ss_pred             echhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH---HHHH
Confidence            9999986643221 1223457999999999987       356899999999999999999999998643221   1111


Q ss_pred             HHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCC---CCHHHHHHH
Q 006317          542 YAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANR---PTMASVVVM  595 (650)
Q Consensus       542 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~R---Pt~~evl~~  595 (650)
                      .......     ...-+.+....+.+   +.+++.+||+ +|++|   |+++||++.
T Consensus       281 ~i~~~~~-----~~~~p~~~~~~s~~---~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          281 KIVHYKE-----HLSLPLVDEGVPEE---ARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHTHHH-----HCCCC----CCCHH---HHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHhccc-----CcCCCccccCCCHH---HHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            1111000     00011111223333   4456678998 99998   699999864


No 72 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2e-40  Score=344.34  Aligned_cols=246  Identities=23%  Similarity=0.298  Sum_probs=191.5

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|+..++||+|+||+||+|+.. +|+.||||++.....  .....+..|+..+.++ +||||+++++++.+++..++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            367999999999999999999875 689999999865432  2333455666665555 999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+ +++|.+++..  ....++|..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++.....
T Consensus       136 ~e~~-~~~L~~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          136 TELC-GPSLQQHCEA--WGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EECC-CCBHHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             Eecc-CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999 6799988875  3456999999999999999999999987   99999999999999999999999999876543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..   ......||+.|+|||++.+ .++.++||||||+++|||++|..++...          ..+..+..+..    .+
T Consensus       210 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~~~~~~~~~----~~  271 (311)
T 3p1a_A          210 AG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGWQQLRQGYL----PP  271 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHHHHHTTTCC----CH
T ss_pred             CC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHHHHHhccCC----Cc
Confidence            22   2334569999999998875 7899999999999999999997665321          01111111111    11


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+.....   ..+.+++.+||+.||++|||+.|+++.
T Consensus       272 ~~~~~~~---~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          272 EFTAGLS---SELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccCCC---HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            1111122   345567779999999999999999853


No 73 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.5e-40  Score=339.67  Aligned_cols=261  Identities=15%  Similarity=0.210  Sum_probs=207.7

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|+..+.||+|+||.||+++. .+++.||||++.....  ...+.+|+.++.++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46799999999999999999985 5689999999865432  23578899999999 79999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC-----eEEeeeecccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI-----PKISDFGMARL  475 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~DFGla~~  475 (650)
                      |+ +++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.     +||+|||+++.
T Consensus        87 ~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 9999999975  2446999999999999999999999987   999999999999988776     99999999987


Q ss_pred             cccCCCC-----CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          476 FEMDQSQ-----GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       476 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      .......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            6543321     12345679999999999999999999999999999999999999997544333333222221111000


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ...+     +....++   .+.+++..||+.||++||++.+|++.|+..
T Consensus       241 ~~~~-----~~~~~~~---~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          241 PLRE-----LCAGFPE---EFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             CHHH-----HTTTSCH---HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cHHH-----HHhhCcH---HHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            0000     1111223   455677799999999999999999998753


No 74 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.7e-40  Score=339.49  Aligned_cols=260  Identities=27%  Similarity=0.476  Sum_probs=192.4

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ..++|+..++||+|+||.||+|+...  .||||+++...  ......+.+|+.++++++||||++++++. .....++||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            45689999999999999999998743  59999987553  23445789999999999999999999965 556689999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        99 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  173 (289)
T 3og7_A           99 QWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW  173 (289)
T ss_dssp             ECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             EecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccc
Confidence            99999999999864  3456999999999999999999999987   999999999999999999999999999865533


Q ss_pred             CCCCccceeecCccccChhccc---cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVT---RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ..........||..|+|||.+.   +..++.++||||||+++|||++|+.||.....  ...+............    +
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~----~  247 (289)
T 3og7_A          174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN--RDQIIEMVGRGSLSPD----L  247 (289)
T ss_dssp             ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC--HHHHHHHHHHTSCCCC----T
T ss_pred             cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch--HHHHHHHhcccccCcc----h
Confidence            3333344567999999999986   56788999999999999999999999864322  1122222221111110    0


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                       ..+....+   ..+.+++..||+.||++|||+.+|+++|+..
T Consensus       248 -~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          248 -SKVRSNCP---KRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             -TSSCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             -hhccccCC---HHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence             01111222   3455677799999999999999999999764


No 75 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.8e-40  Score=337.07  Aligned_cols=253  Identities=28%  Similarity=0.450  Sum_probs=193.9

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCch----hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ----GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|+..++||+|+||.||+++.. ++.||||++......    ....+.+|+.++++++||||+++++++.+++..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            367888999999999999999974 889999998764322    235688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC--------CCCeEEeee
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA--------DMIPKISDF  470 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--------~~~~kl~DF  470 (650)
                      |||+++++|.+++.    ...+++..++.++.||+.||+|||+++..+|+||||||+|||++.        ++.+||+||
T Consensus        85 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           85 MEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999884    457999999999999999999999987556999999999999986        778999999


Q ss_pred             ecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          471 GMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       471 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      |+++......    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......   .   ..+......
T Consensus       161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~---~~~~~~~~~  230 (271)
T 3dtc_A          161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL---A---VAYGVAMNK  230 (271)
T ss_dssp             CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH---H---HHHHHHTSC
T ss_pred             Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---H---HHHhhhcCC
Confidence            9998654322    22357899999999999999999999999999999999999998632211   1   111111111


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .     ........++   .+.+++.+||+.||++|||+.|+++.|+.
T Consensus       231 ~-----~~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          231 L-----ALPIPSTCPE---PFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             C-----CCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             C-----CCCCCcccCH---HHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            0     1111122233   35567779999999999999999999974


No 76 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=8.6e-41  Score=347.13  Aligned_cols=275  Identities=24%  Similarity=0.362  Sum_probs=200.2

Q ss_pred             ccccccccChhhHHhhccCCCcCCcccccCceeEEEeeccC----CcceeEeeccccC--chhHHHHHHHHHHHhhCCCC
Q 006317          307 NTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHR  380 (650)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~  380 (650)
                      ...+.++..+.++....++|...+.||+|+||.||+|+...    +..||||++....  ......+.+|+.++++++||
T Consensus        17 ~~~eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~   96 (313)
T 3brb_A           17 RGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP   96 (313)
T ss_dssp             -------CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCT
T ss_pred             CchHhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCC
Confidence            34445555666666677899999999999999999997542    4579999997543  33345689999999999999


Q ss_pred             ceeeecceeecCCe-----eEEEEecCCCCChhHHHHhhh---ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCC
Q 006317          381 NLVRLLGFSFEETE-----RLLIYEFVPNSSVDKFIFDAI---KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDL  452 (650)
Q Consensus       381 niv~l~g~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl  452 (650)
                      ||+++++++.+...     .++||||+++|+|.+++....   ....+++..++.++.||+.||.|||+.+   |+||||
T Consensus        97 ~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~di  173 (313)
T 3brb_A           97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDL  173 (313)
T ss_dssp             TBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCC
T ss_pred             CeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence            99999999987553     499999999999999986432   3456999999999999999999999987   999999


Q ss_pred             CCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCC
Q 006317          453 KASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFR  531 (650)
Q Consensus       453 k~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~  531 (650)
                      ||+|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.|+...
T Consensus       174 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          174 AARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             SGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            99999999999999999999987654333233344567889999999999999999999999999999999 77787533


Q ss_pred             CCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          532 IGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       532 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ..   ...........         .+......+.   .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       254 ~~---~~~~~~~~~~~---------~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          254 QN---HEMYDYLLHGH---------RLKQPEDCLD---ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             CG---GGHHHHHHTTC---------CCCCBTTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CH---HHHHHHHHcCC---------CCCCCccccH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22   22222221111         0111112223   455677799999999999999999999754


No 77 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=3.3e-40  Score=339.35  Aligned_cols=262  Identities=22%  Similarity=0.305  Sum_probs=199.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ++|+..++||+|+||+||+++.. +++.||||++.....  .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            46888999999999999999865 588999999975432  234568899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++ +|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             cCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            9986 55555543  3467999999999999999999999997   9999999999999999999999999998664322


Q ss_pred             CCCccceeecCccccChhccccCC-CCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC---cc---
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGH-FSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT---AL---  553 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~---  553 (650)
                        .......||+.|+|||++.+.. ++.++||||||+++|||++|+.|+....  ...+.+...........   ..   
T Consensus       156 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN--DVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             --SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS--SHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             --ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC--CHHHHHHHHHHHhCCCChhhhhhhc
Confidence              2233457899999999998765 7999999999999999999998864222  22222222222111110   00   


Q ss_pred             ccc----------CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          554 NLI----------DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       554 ~~i----------d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      +..          ...+..........+.+++.+||+.||++|||++|+++-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            000          000000111122345577889999999999999999853


No 78 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=3.5e-40  Score=352.61  Aligned_cols=255  Identities=22%  Similarity=0.290  Sum_probs=199.5

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch---hHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---GELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|+..++||+|+||.||+++.. +++.||||++++....   ....+.+|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            357899999999999999999865 4788999999765322   223578899999887 89999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus       131 V~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~  204 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  204 (396)
T ss_dssp             EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence            9999999999999873   457999999999999999999999987   9999999999999999999999999997532


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc--chhHHHHHHhccCCCcccc
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA--EDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~  555 (650)
                      ..  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.  ..............     
T Consensus       205 ~~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-----  277 (396)
T 4dc2_A          205 RP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-----  277 (396)
T ss_dssp             CT--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-----
T ss_pred             cC--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-----
Confidence            21  2234457899999999999999999999999999999999999999964322111  11111111111111     


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCH------HHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTM------ASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~------~evl~  594 (650)
                       ...+......   .+.+++..||+.||++||++      .||++
T Consensus       278 -~~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          278 -QIRIPRSLSV---KAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             -CCCCCTTSCH---HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             -ccCCCCcCCH---HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence             0111122233   34567779999999999995      56654


No 79 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.6e-40  Score=340.96  Aligned_cols=260  Identities=22%  Similarity=0.332  Sum_probs=197.5

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccCch--hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      ++|+..+.||+|+||.||+++..+|+.||||++......  ....+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            468889999999999999999877999999998654322  235688999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      +++ +|.+++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  154 (288)
T 1ob3_A           82 LDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-  154 (288)
T ss_dssp             CSE-EHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             cCC-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc-
Confidence            986 89888864  3457999999999999999999999987   9999999999999999999999999998654321 


Q ss_pred             CCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC--------c
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT--------A  552 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~--------~  552 (650)
                       .......||+.|+|||++.+. .++.++||||||+++|||++|+.||.....   .+.+...........        .
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHHCCCChhhchhhhc
Confidence             122345789999999998764 589999999999999999999999864321   122222221111100        0


Q ss_pred             ccccCccCCC--------CChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLRN--------GSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~~--------~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ....++....        ........+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0011111100        00011234557788999999999999999985


No 80 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4.5e-40  Score=350.55  Aligned_cols=249  Identities=23%  Similarity=0.336  Sum_probs=202.9

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.+.||+|+||.||+++.. +++.||+|++.+..   ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            67899999999999999999865 47889999986542   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|..++.   ....+++..++.++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++.....
T Consensus        95 e~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQ---QNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             CCCTTEEHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            9999999999987   3557999999999999999999999987   999999999999999999999999999866432


Q ss_pred             CCCCccceeecCccccChhcccc---CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTR---GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                         .......||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+........         
T Consensus       169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~---------  236 (384)
T 4fr4_A          169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV---------  236 (384)
T ss_dssp             ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC---------
T ss_pred             ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc---------
Confidence               23345679999999999874   458999999999999999999999997544443333332221110         


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCC-HHHHHH
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPT-MASVVV  594 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-~~evl~  594 (650)
                       .........   .+.+++..||+.||++||+ +.+|++
T Consensus       237 -~~~p~~~s~---~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 -VTYPSAWSQ---EMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -CCCCTTSCH---HHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -cCCCCcCCH---HHHHHHHHHhcCCHhHhcccHHHHHc
Confidence             111112223   4556777999999999998 777774


No 81 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.9e-40  Score=353.27  Aligned_cols=246  Identities=25%  Similarity=0.330  Sum_probs=195.3

Q ss_pred             cCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecCCCCC
Q 006317          328 TDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFVPNSS  406 (650)
Q Consensus       328 ~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~~~gs  406 (650)
                      ..+.||+|+||.||+++. .+|+.||+|+++.........+.+|+.++++++||||+++++++.+.+..+|||||+++++
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            357899999999999986 4588999999988766667789999999999999999999999999999999999999999


Q ss_pred             hhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe--CCCCCeEEeeeecccccccCCCCCc
Q 006317          407 VDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL--DADMIPKISDFGMARLFEMDQSQGD  484 (650)
Q Consensus       407 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl--~~~~~~kl~DFGla~~~~~~~~~~~  484 (650)
                      |.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||+  +.++.+||+|||+++......   .
T Consensus       173 L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~  244 (373)
T 2x4f_A          173 LFDRIID--ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---K  244 (373)
T ss_dssp             EHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---B
T ss_pred             HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---c
Confidence            9998874  3456999999999999999999999987   9999999999999  677899999999998765332   2


Q ss_pred             cceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHh-ccCCCcccccCccCCCC
Q 006317          485 TSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKN-WNEGTALNLIDPTLRNG  563 (650)
Q Consensus       485 ~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~-~~~~~~~~~id~~l~~~  563 (650)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .+.+...... +.       +.+.....
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~-------~~~~~~~~  314 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND---AETLNNILACRWD-------LEDEEFQD  314 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHHTCCC-------SCSGGGTT
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhccCC-------CChhhhcc
Confidence            2335699999999999999999999999999999999999999863321   1222211111 10       00000011


Q ss_pred             ChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          564 SSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       564 ~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..   ..+.+++.+||+.||++|||+.|+++
T Consensus       315 ~~---~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          315 IS---EEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             SC---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CC---HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            22   34556778999999999999999986


No 82 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.1e-40  Score=341.32  Aligned_cols=261  Identities=26%  Similarity=0.408  Sum_probs=198.6

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecCC
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFVP  403 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~~  403 (650)
                      ++|+..+.||+|+||.||+++.. ++.||||++...  .....+.+|+.++++++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            56888899999999999999874 788999998654  334578999999999999999999998874  4799999999


Q ss_pred             CCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC-eEEeeeecccccccCCCC
Q 006317          404 NSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI-PKISDFGMARLFEMDQSQ  482 (650)
Q Consensus       404 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-~kl~DFGla~~~~~~~~~  482 (650)
                      +|+|.+++........+++..++.++.||++||+|||+.+..+|+||||||+|||++.++. +||+|||++......   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999975433345899999999999999999999943234999999999999998886 799999999754321   


Q ss_pred             CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCC
Q 006317          483 GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRN  562 (650)
Q Consensus       483 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~  562 (650)
                        .....||..|+|||++.+..++.++||||||+++|||++|+.|+.......    ....+..... .     .+.+..
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~-~-----~~~~~~  227 (307)
T 2eva_A          160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHNG-T-----RPPLIK  227 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHTT-C-----CCCCBT
T ss_pred             --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhcC-C-----CCCccc
Confidence              223468999999999999999999999999999999999999986322211    1111111111 1     111112


Q ss_pred             CChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCCCCCC
Q 006317          563 GSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSLPLPS  607 (650)
Q Consensus       563 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~~~p~  607 (650)
                      ..+.   .+.+++.+||+.||++|||+.||+++|+.....++.+.
T Consensus       228 ~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~  269 (307)
T 2eva_A          228 NLPK---PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD  269 (307)
T ss_dssp             TCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred             ccCH---HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence            2233   34567779999999999999999999986544444333


No 83 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.6e-40  Score=343.57  Aligned_cols=271  Identities=27%  Similarity=0.363  Sum_probs=212.9

Q ss_pred             ccccChhhHHhhccCCCcCCcccccCceeEEEeec------cCCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCce
Q 006317          311 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNL  382 (650)
Q Consensus       311 ~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~ni  382 (650)
                      .+.++........++|...+.||+|+||.||+++.      .+++.||||++..... .....+.+|+.++.++ +||||
T Consensus        14 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i   93 (316)
T 2xir_A           14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV   93 (316)
T ss_dssp             GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             hccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCe
Confidence            34455666666778999999999999999999973      3467899999976543 3345789999999999 79999


Q ss_pred             eeecceeecCC-eeEEEEecCCCCChhHHHHhhhc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEE
Q 006317          383 VRLLGFSFEET-ERLLIYEFVPNSSVDKFIFDAIK-------------RVQLDWETRYKIIGGIARGILYLHEDSRLRII  448 (650)
Q Consensus       383 v~l~g~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii  448 (650)
                      +++++++...+ ..++||||+++|+|.+++.....             ...+++..++.++.||+.||.|||+.+   |+
T Consensus        94 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~  170 (316)
T 2xir_A           94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CI  170 (316)
T ss_dssp             CCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             eeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            99999987654 58999999999999999975321             122899999999999999999999987   99


Q ss_pred             ecCCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCC
Q 006317          449 HRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKN  527 (650)
Q Consensus       449 HrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p  527 (650)
                      ||||||+|||++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |+.|
T Consensus       171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p  250 (316)
T 2xir_A          171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP  250 (316)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999986654433333445678899999999999999999999999999999999 9888


Q ss_pred             CCCCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          528 NSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       528 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      +.......  .........    ..     .......+.   .+.+++.+||+.||++|||+.||++.|+.
T Consensus       251 ~~~~~~~~--~~~~~~~~~----~~-----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          251 YPGVKIDE--EFCRRLKEG----TR-----MRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             STTCCCSH--HHHHHHHHT----CC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcccchhH--HHHHHhccC----cc-----CCCCCCCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            86332211  111111111    10     111111223   45567779999999999999999999864


No 84 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-40  Score=348.33  Aligned_cols=253  Identities=21%  Similarity=0.323  Sum_probs=194.8

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCCC--CceeeecceeecCCeeEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQH--RNLVRLLGFSFEETERLL  397 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~l  397 (650)
                      ..++|++.+.||+|+||.||++...+++.||||++....  ......+.+|+.++.+++|  |||+++++++..+...++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            456799999999999999999998889999999987543  2334578999999999986  999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||| +.+++|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+ ++.+||+|||+++.+.
T Consensus        87 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             EEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             EEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            999 568899999973   567999999999999999999999987   99999999999997 6789999999998765


Q ss_pred             cCCCCCccceeecCccccChhcccc-----------CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHh
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTR-----------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKN  546 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~  546 (650)
                      ............||+.|+|||++.+           ..++.++||||||+++|||++|+.||.....     ........
T Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~  233 (343)
T 3dbq_A          159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAI  233 (343)
T ss_dssp             -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHH
T ss_pred             cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHH
Confidence            4433333445679999999999865           6789999999999999999999999853211     11111111


Q ss_pred             ccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          547 WNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......     .........   .+.+++..||+.||++|||+.|+++.
T Consensus       234 ~~~~~~-----~~~~~~~~~---~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          234 IDPNHE-----IEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HCTTSC-----CCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hcCCcc-----cCCcccCCH---HHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            111100     011111222   45567779999999999999999864


No 85 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=5.5e-40  Score=341.99  Aligned_cols=260  Identities=25%  Similarity=0.361  Sum_probs=188.1

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch-hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|+..++||+|+||.||+|+.. +|+.||||++...... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467899999999999999999865 5889999999765332 33568899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhc---cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          401 FVPNSSVDKFIFDAIK---RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      |++ |+|.+++.....   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 599999875321   245899999999999999999999987   9999999999999999999999999998664


Q ss_pred             cCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccC--CCc--
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNE--GTA--  552 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~~--  552 (650)
                      ...  .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......   +.+.........  ...  
T Consensus       160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---EQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCTTTCG
T ss_pred             CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChhHhh
Confidence            322  22334578999999999976 46899999999999999999999998643322   222221111100  000  


Q ss_pred             --------------------ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 --------------------LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 --------------------~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                                          .+.+.+.......   ..+.+++.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD---GNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC---HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCC---HHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                                0001111111122   24567788999999999999999974


No 86 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.1e-40  Score=351.55  Aligned_cols=253  Identities=23%  Similarity=0.325  Sum_probs=202.3

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..+.||+|+||.||+++.. +|+.||||++.....  .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4568999999999999999999864 588999999976532  3345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC---CeEEeeeecccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM---IPKISDFGMARL  475 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DFGla~~  475 (650)
                      |||+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++   .+||+|||++..
T Consensus       107 ~e~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          107 FDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             ECCCCSCBHHHHHT---TCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            99999999999886   3467999999999999999999999987   99999999999998654   599999999986


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .....   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...+.........     ..
T Consensus       181 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~---~~~~~~~i~~~~~-----~~  249 (362)
T 2bdw_A          181 VNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---QHRLYAQIKAGAY-----DY  249 (362)
T ss_dssp             CTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTCC-----CC
T ss_pred             ecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhCCC-----CC
Confidence            54322   2334679999999999999999999999999999999999999986322   1222222111100     00


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+.. ...+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       250 ~~~~~-~~~~---~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 PSPEW-DTVT---PEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CTTGG-GGSC---HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             Ccccc-cCCC---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00000 0112   345567779999999999999999854


No 87 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.9e-40  Score=350.09  Aligned_cols=253  Identities=23%  Similarity=0.347  Sum_probs=188.1

Q ss_pred             hhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ...++|+..+.||+|+||.||+++.. +++.||||++....  ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            34578999999999999999999975 47789999997643  3346788999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEEeeeeccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKISDFGMARLF  476 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGla~~~  476 (650)
                      ||+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.   ++.+||+|||+++..
T Consensus       128 e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          128 ELVTGGELFDRIV---EKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             CCCCSCBHHHHHT---TCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EeCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            9999999999986   3456999999999999999999999987   999999999999975   889999999999865


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ...   .......||+.|+|||++.+..++.++||||||+++|||++|+.|+......  ..+......    .. ....
T Consensus       202 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~i~~----~~-~~~~  271 (349)
T 2w4o_A          202 EHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QFMFRRILN----CE-YYFI  271 (349)
T ss_dssp             --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HHHHHHHHT----TC-CCCC
T ss_pred             Ccc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HHHHHHHHh----CC-CccC
Confidence            432   1233467899999999999999999999999999999999999998633221  111111111    10 0011


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+ .....+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       272 ~~-~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          272 SP-WWDEVS---LNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             TT-TTTTSC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             Cc-hhhhCC---HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11 111122   345567789999999999999999864


No 88 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.1e-40  Score=339.61  Aligned_cols=249  Identities=24%  Similarity=0.312  Sum_probs=192.8

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch--------------------------hHHHHHHHHHHHh
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--------------------------GELEFKNEVLLVA  375 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------------------------~~~~~~~E~~~l~  375 (650)
                      .++|+..+.||+|+||.||+++.. +++.||||++......                          ....+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            367899999999999999999854 5889999998754321                          1235889999999


Q ss_pred             hCCCCceeeecceeec--CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCC
Q 006317          376 RLQHRNLVRLLGFSFE--ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLK  453 (650)
Q Consensus       376 ~l~H~niv~l~g~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  453 (650)
                      +++||||+++++++.+  ....++||||+++++|.+++    ....+++..++.++.||+.||+|||+.+   |+|||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  164 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIK  164 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCC
Confidence            9999999999999986  56789999999999998865    3457999999999999999999999987   9999999


Q ss_pred             CCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCC---CCccccccchhHHHHHHHhCCCCCCC
Q 006317          454 ASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGH---FSIKSDVFSFGVLVLEIISGQKNNSF  530 (650)
Q Consensus       454 ~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~sDV~S~Gvll~elltG~~p~~~  530 (650)
                      |+|||++.++.+||+|||+++......  .......||+.|+|||.+.+..   .+.++||||||+++|||++|+.||..
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            999999999999999999998664322  1233457999999999998765   37889999999999999999999863


Q ss_pred             CCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          531 RIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       531 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..   ...+.......    .    .........++   .+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~---~~~~~~~~~~~----~----~~~~~~~~~~~---~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          243 ER---IMCLHSKIKSQ----A----LEFPDQPDIAE---DLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SS---HHHHHHHHHHC----C----CCCCSSSCCCH---HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cc---HHHHHHHHhcc----c----CCCCCccccCH---HHHHHHHHHhhcChhhCCCHHHHhc
Confidence            21   11111111110    0    00000112233   3556777999999999999999864


No 89 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5.1e-40  Score=351.10  Aligned_cols=253  Identities=22%  Similarity=0.262  Sum_probs=204.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      .++|++.+.||+|+||.||+++.. +|+.||+|++..........+.+|+.++++++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            467999999999999999999865 5889999999876655566789999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC--CCCeEEeeeecccccccC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA--DMIPKISDFGMARLFEMD  479 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~~  479 (650)
                      +++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+++.....
T Consensus       130 ~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            999999998863  3346999999999999999999999987   999999999999974  478999999999876432


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                         .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ....+........      .+++.
T Consensus       205 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~i~~~~~------~~~~~  272 (387)
T 1kob_A          205 ---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED---DLETLQNVKRCDW------EFDED  272 (387)
T ss_dssp             ---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHHHHCCC------CCCSS
T ss_pred             ---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCC------CCCcc
Confidence               22334579999999999999999999999999999999999999986322   1122221111100      01111


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .....+.   .+.+++.+||+.||++|||+.|+++.
T Consensus       273 ~~~~~s~---~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          273 AFSSVSP---EAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             TTTTSCH---HHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ccccCCH---HHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            1112223   45567779999999999999999865


No 90 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.9e-40  Score=359.02  Aligned_cols=254  Identities=23%  Similarity=0.297  Sum_probs=202.1

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..++||+|+||.||++.. .+|+.+|+|++.....  .....+.+|+.++++++||||+++++++.+++..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            457899999999999999999975 4688999999976543  2345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC---CCCCeEEeeeecccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD---ADMIPKISDFGMARL  475 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~DFGla~~  475 (650)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++   +++.+||+|||+++.
T Consensus        89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999998873   467999999999999999999999997   99999999999998   467899999999986


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...+.........     ..
T Consensus       163 ~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~---~~~~~~~i~~~~~-----~~  232 (444)
T 3soa_A          163 VEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED---QHRLYQQIKAGAY-----DF  232 (444)
T ss_dssp             CCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHHHTCC-----CC
T ss_pred             ecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHhCCC-----CC
Confidence            54322  22334679999999999999999999999999999999999999985322   2222222211100     00


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+.. ...++   .+.+++..||+.||++|||+.|+++.
T Consensus       233 ~~~~~-~~~s~---~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          233 PSPEW-DTVTP---EAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CTTTT-TTSCH---HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             Ccccc-ccCCH---HHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            01111 11223   34567779999999999999999864


No 91 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.9e-40  Score=340.12  Aligned_cols=258  Identities=27%  Similarity=0.426  Sum_probs=209.2

Q ss_pred             HhhccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      +...++|+..+.||+|+||.||++.... +..||+|++.... .....+.+|+.++++++||||+++++++.++...++|
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence            3456789999999999999999998764 7889999997644 3445789999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus        88 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           88 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             EECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             EEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            9999999999999753 3456999999999999999999999998   99999999999999999999999999986653


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      .. ........+|..|+|||.+.+..++.++||||||+++|||++ |+.|+......   ..........         .
T Consensus       164 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~~~~~---------~  230 (288)
T 3kfa_A          164 DT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELLEKDY---------R  230 (288)
T ss_dssp             SS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHHTTC---------C
T ss_pred             Cc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhccC---------C
Confidence            32 222334567889999999999999999999999999999999 88887643222   2222111111         1


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .......++   .+.+++..||+.||++|||+.+|+++|+.
T Consensus       231 ~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          231 MERPEGCPE---KVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCH---HHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            111112233   45567779999999999999999999864


No 92 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.7e-40  Score=350.61  Aligned_cols=248  Identities=24%  Similarity=0.296  Sum_probs=197.0

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|+..++||+|+||.||+++.. +|+.||||++++..   ......+.+|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            367999999999999999999865 58899999997642   22344678899999988 79999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus       102 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~  175 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI  175 (353)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence            9999999999999874   467999999999999999999999987   9999999999999999999999999997533


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....   ..++.......    .      
T Consensus       176 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~~~~~i~~~----~------  240 (353)
T 3txo_A          176 CN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN---EDDLFEAILND----E------  240 (353)
T ss_dssp             C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHC----C------
T ss_pred             cC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC---HHHHHHHHHcC----C------
Confidence            22  223445689999999999999899999999999999999999999986432   22222222111    0      


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCH------HHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTM------ASVVV  594 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~------~evl~  594 (650)
                      ..+......   .+.+++..||+.||++||++      .|+++
T Consensus       241 ~~~p~~~~~---~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          241 VVYPTWLHE---DATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCCCCCCCH---HHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            111112233   34567779999999999998      77774


No 93 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=6.8e-40  Score=346.23  Aligned_cols=254  Identities=22%  Similarity=0.267  Sum_probs=201.3

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-----hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-----QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      .+.|++.+.||+|+||.||+++.. +|+.||||++.....     .....+.+|+.++++++||||+++++++.+.+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            357889999999999999999864 588999999864321     23567899999999999999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC---eEEeeeec
Q 006317          397 LIYEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI---PKISDFGM  472 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGl  472 (650)
                      +||||+++++|.+++.... ....+++..++.++.||+.||+|||+++   |+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999998886543 2345899999999999999999999987   999999999999987654   99999999


Q ss_pred             ccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ++......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....    ..+.......    ..
T Consensus       180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~i~~~----~~  249 (351)
T 3c0i_A          180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIKG----KY  249 (351)
T ss_dssp             CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHHHHHHT----CC
T ss_pred             eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHHHHHcC----CC
Confidence            98765322  22334579999999999999999999999999999999999999986321    1121111111    00


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                        ...+......+   ..+.+++.+||+.||++|||+.|+++
T Consensus       250 --~~~~~~~~~~s---~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          250 --KMNPRQWSHIS---ESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             --CCCHHHHTTSC---HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CCCccccccCC---HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              00000001112   34556778999999999999999985


No 94 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=9e-40  Score=334.99  Aligned_cols=254  Identities=28%  Similarity=0.536  Sum_probs=199.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhH-------HHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGE-------LEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~-------~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      .++|+..+.||+|+||.||+++.. +++.||||++........       ..+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            467899999999999999999864 688999999865432211       56889999999999999999999986655 


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC-----eEEee
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI-----PKISD  469 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~D  469 (650)
                       ++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+ .+|+||||||+|||++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             799999999999998875  3457999999999999999999999875 34999999999999988876     99999


Q ss_pred             eecccccccCCCCCccceeecCccccChhccc--cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          470 FGMARLFEMDQSQGDTSRIVGTFGYMAPEYVT--RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       470 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      ||+++....     ......||+.|+|||++.  ...++.++||||||+++|||++|+.||........ ......... 
T Consensus       173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~-  245 (287)
T 4f0f_A          173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMIREE-  245 (287)
T ss_dssp             CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHHHHS-
T ss_pred             CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHHhcc-
Confidence            999974322     233467899999999984  45678999999999999999999999864332221 111111111 


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                             ...+.+....+.   .+.+++..||+.||++|||+.||++.|+.
T Consensus       246 -------~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          246 -------GLRPTIPEDCPP---RLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             -------CCCCCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             -------CCCCCCCcccCH---HHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence                   011122222333   45567779999999999999999999875


No 95 
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1e-41  Score=351.94  Aligned_cols=260  Identities=25%  Similarity=0.354  Sum_probs=185.9

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhh--CCCCceeeecceeecCC----eeE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEET----ERL  396 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~  396 (650)
                      .++|...++||+|+||.||+|+. +++.||||++...   ....+.+|.+++..  ++||||+++++++....    ..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            36799999999999999999987 4899999998654   33456778888877  79999999999998776    789


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLH--------EDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                      +||||+++|+|.+++..    ..+++..++.++.|++.||+|||        +.+   |+||||||+||||+.++.+||+
T Consensus        78 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             EEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEe
Confidence            99999999999999853    46888999999999999999999        665   9999999999999999999999


Q ss_pred             eeecccccccCCCC--CccceeecCccccChhccccC------CCCccccccchhHHHHHHHhC----------CCCCCC
Q 006317          469 DFGMARLFEMDQSQ--GDTSRIVGTFGYMAPEYVTRG------HFSIKSDVFSFGVLVLEIISG----------QKNNSF  530 (650)
Q Consensus       469 DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~s~~sDV~S~Gvll~elltG----------~~p~~~  530 (650)
                      |||+++........  .......||+.|+|||++.+.      .++.++||||||+++|||++|          +.|+..
T Consensus       151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred             ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence            99999765533221  122334799999999999776      344689999999999999999          444432


Q ss_pred             CCCc--ccchhHHHHHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          531 RIGE--EAEDLLTYAWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       531 ~~~~--~~~~l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      ....  .........    ..    ....+.+...  ..+....+.+++.+||+.||++|||+.+|+++|+....
T Consensus       231 ~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~  297 (303)
T 3gxj_A          231 LVPSDPSVEEMRKVV----CE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             TCC-CCCCC-CHHHH----TT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred             cCCCCccHHHHHHHH----HH----hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence            1111  001111110    00    0111111111  22445567789999999999999999999999987543


No 96 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.4e-40  Score=340.16  Aligned_cols=255  Identities=22%  Similarity=0.341  Sum_probs=192.5

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC----CcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ..++|+..+.||+|+||.||+|+...    +..||+|++.... ......+.+|+.++++++||||+++++++. ++..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence            34688899999999999999998643    4469999987643 334457899999999999999999999974 56789


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        92 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             EEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence            99999999999999974  3456999999999999999999999987   999999999999999999999999999876


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ..... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....   .+........    ..   
T Consensus       167 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~---~~~~~~i~~~----~~---  235 (281)
T 1mp8_A          167 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---NDVIGRIENG----ER---  235 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG---GGHHHHHHTT----CC---
T ss_pred             Ccccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH---HHHHHHHHcC----CC---
Confidence            43221 12233456789999999999999999999999999999997 8888864322   2222221111    00   


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                        ..+....+.   .+.+++..||+.||++|||+.||++.|+.
T Consensus       236 --~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          236 --LPMPPNCPP---TLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             --CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCCCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              111122333   34567779999999999999999999864


No 97 
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.4e-40  Score=347.75  Aligned_cols=266  Identities=16%  Similarity=0.203  Sum_probs=198.2

Q ss_pred             ccCCCcCCcccccCceeEEEeecc----CCcceeEeeccccCch-----------hHHHHHHHHHHHhhCCCCceeeecc
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNSVQ-----------GELEFKNEVLLVARLQHRNLVRLLG  387 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g  387 (650)
                      .++|.+.+.||+|+||.||+++..    .+..+|||++......           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367999999999999999999875    5778999998765322           1123667888999999999999999


Q ss_pred             eeec----CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC
Q 006317          388 FSFE----ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM  463 (650)
Q Consensus       388 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~  463 (650)
                      ++..    ....++||||+ +++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence            9987    67889999999 9999999864   337999999999999999999999987   99999999999999887


Q ss_pred             --CeEEeeeecccccccCCCC-----CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc
Q 006317          464 --IPKISDFGMARLFEMDQSQ-----GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA  536 (650)
Q Consensus       464 --~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~  536 (650)
                        .+||+|||+++.+......     .......||..|+|||++.+..++.++||||||+++|||++|+.||....... 
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-  267 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-  267 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence              9999999999876433211     11244579999999999999999999999999999999999999985322111 


Q ss_pred             chhHHHHHHhccCCCcccccCccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          537 EDLLTYAWKNWNEGTALNLIDPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       537 ~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      ... ........... ...+..... ...+.   .+.+++..||+.||++||++.+|++.|+....
T Consensus       268 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          268 VAV-QTAKTNLLDEL-PQSVLKWAPSGSSCC---EIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHH-HHHHHHHHHTT-THHHHHHSCTTSCCH---HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHH-HHHHHhhcccc-cHHHHhhccccccHH---HHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            111 11111111100 000101111 12233   45567779999999999999999999987654


No 98 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.6e-40  Score=346.91  Aligned_cols=259  Identities=24%  Similarity=0.369  Sum_probs=206.0

Q ss_pred             hccCCCcCCcccccCceeEEEeecc--------CCcceeEeeccccCc-hhHHHHHHHHHHHhhC-CCCceeeecceeec
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKNSV-QGELEFKNEVLLVARL-QHRNLVRLLGFSFE  391 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  391 (650)
                      ..++|...+.||+|+||.||+++..        ++..||||++..... .....+.+|+.+++++ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3478899999999999999999853        466899999976533 3445788999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCChhHHHHhhhc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceE
Q 006317          392 ETERLLIYEFVPNSSVDKFIFDAIK-------------RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL  458 (650)
Q Consensus       392 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL  458 (650)
                      .+..++||||+++|+|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence            9999999999999999999975321             234899999999999999999999987   999999999999


Q ss_pred             eCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccc
Q 006317          459 LDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAE  537 (650)
Q Consensus       459 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~  537 (650)
                      |+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.|+....   ..
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~  266 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---VE  266 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC---HH
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC---HH
Confidence            99999999999999987654332223334567889999999999899999999999999999999 988886322   12


Q ss_pred             hhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          538 DLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       538 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ++.........         .......+.   .+.+++.+||+.||++|||+.||++.|+.
T Consensus       267 ~~~~~~~~~~~---------~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          267 ELFKLLKEGHR---------MDKPANCTN---ELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             HHHHHHHHTCC---------CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCCC---------CCCCccCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            22222211110         111112233   35567779999999999999999999875


No 99 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.5e-40  Score=352.36  Aligned_cols=210  Identities=26%  Similarity=0.304  Sum_probs=181.7

Q ss_pred             ccccChhhHHhhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCC-----CCceee
Q 006317          311 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----HRNLVR  384 (650)
Q Consensus       311 ~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H~niv~  384 (650)
                      ...+.+.......++|.+.++||+|+||.||+++. .+++.||||++... ......+..|+.++.+++     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            44566666667789999999999999999999986 45889999999753 233446788999999986     999999


Q ss_pred             ecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---
Q 006317          385 LLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---  461 (650)
Q Consensus       385 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---  461 (650)
                      +++++...+..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.   
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence            999999999999999999 99999998753 2345999999999999999999999987   999999999999986   


Q ss_pred             ----------------------CCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHH
Q 006317          462 ----------------------DMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVL  519 (650)
Q Consensus       462 ----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~  519 (650)
                                            ++.+||+|||+++....     ......||+.|+|||++.+..++.++||||||+++|
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  250 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA  250 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence                                  78999999999986432     123457899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCC
Q 006317          520 EIISGQKNNSFR  531 (650)
Q Consensus       520 elltG~~p~~~~  531 (650)
                      ||++|+.||...
T Consensus       251 ell~g~~pf~~~  262 (360)
T 3llt_A          251 ELYTGSLLFRTH  262 (360)
T ss_dssp             HHHHSSCSCCCS
T ss_pred             HHHHCCCCCCCC
Confidence            999999998643


No 100
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=3.4e-41  Score=348.10  Aligned_cols=262  Identities=25%  Similarity=0.402  Sum_probs=201.0

Q ss_pred             cCCCcCCcccccCceeEEEeec-----cCCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecC--Cee
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEE--TER  395 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  395 (650)
                      +.|+..++||+|+||.||++++     .+++.||||++.... ......+.+|+.++++++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            5688899999999999999983     358899999997543 23446789999999999999999999999876  668


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       101 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            999999999999999964  3456999999999999999999999987   99999999999999999999999999987


Q ss_pred             cccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCC--------cccchhHHHHHHh
Q 006317          476 FEMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIG--------EEAEDLLTYAWKN  546 (650)
Q Consensus       476 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~--------~~~~~l~~~~~~~  546 (650)
                      ....... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.....        .............
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            6543221 122334678889999999999999999999999999999999987542110        0000000001111


Q ss_pred             ccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          547 WNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .....     ........+   ..+.+++.+||+.||++|||+.+++++|+.
T Consensus       256 ~~~~~-----~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          256 LKEGK-----RLPCPPNCP---DEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHTTC-----CCCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhccC-----CCCCCCCCC---HHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            11110     011111222   345567779999999999999999999864


No 101
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.2e-40  Score=345.30  Aligned_cols=256  Identities=25%  Similarity=0.392  Sum_probs=195.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcce----eEeecccc-CchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEI----AVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~v----avK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      .++|+..++||+|+||.||+|+.. +++.+    ++|.+... .......+.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            367899999999999999999854 45554    66666543 3345567899999999999999999999998765 78


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +|+||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~v~~~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEECCCSSCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             EEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            99999999999999975  3456999999999999999999999987   999999999999999999999999999876


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .............+|..|+|||.+.+..++.++||||||+++|||++ |+.||......   .+........        
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~~~~~~--------  236 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSILEKGE--------  236 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHHTTC--------
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHHHHcCC--------
Confidence            54433333444567889999999999999999999999999999999 99998643322   2222211110        


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                       ........+.   .+.+++.+||+.||++||++.|+++.|+..
T Consensus       237 -~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          237 -RLPQPPICTI---DVYMIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             -CCCCCTTBCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCCCccCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence             0011111222   455677899999999999999999998764


No 102
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.2e-40  Score=345.81  Aligned_cols=258  Identities=24%  Similarity=0.358  Sum_probs=193.0

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch---hHHHHHHHHHHHhhCCCCceeeecceeecCCe---
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFSFEETE---  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---  394 (650)
                      ..++|++.++||+|+||.||+++. .+++.||||++......   ....+.+|+.++.+++||||+++++++.....   
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            357899999999999999999985 56889999999765332   23468899999999999999999999876543   


Q ss_pred             -eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          395 -RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       395 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                       .++||||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             ccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence             3999999999999999974   457999999999999999999999987   999999999999999999999999999


Q ss_pred             cccccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          474 RLFEMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       474 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      +........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ..   ..+........
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~---~~~~~~~~~~~  237 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP---VS---VAYQHVREDPI  237 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HH---HHHHHHHCCCC
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HH---HHHHHhcCCCC
Confidence            866533221 223345789999999999999999999999999999999999999863221   11   11111111110


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH-Hhc
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV-MLN  597 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~-~L~  597 (650)
                      ..   .......+   ..+.+++.+||+.||++||+..+++. .|.
T Consensus       238 ~~---~~~~~~~~---~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  277 (311)
T 3ork_A          238 PP---SARHEGLS---ADLDAVVLKALAKNPENRYQTAAEMRADLV  277 (311)
T ss_dssp             CH---HHHSTTCC---HHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             Cc---ccccCCCC---HHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence            00   00011122   23556777999999999997666654 343


No 103
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=8.8e-41  Score=338.49  Aligned_cols=254  Identities=27%  Similarity=0.429  Sum_probs=205.5

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecC
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      .++|+..+.||+|+||.||+++..+++.||+|++..... ....+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            357888999999999999999988888999999976543 3457899999999999999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCC
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQ  482 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~  482 (650)
                      ++++|.+++..  ....+++..++.++.||+.||+|||+.+   ++||||||+||+++.++.+||+|||+++....... 
T Consensus        86 ~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-  159 (267)
T 3t9t_A           86 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-  159 (267)
T ss_dssp             TTCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHhh--CcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc-
Confidence            99999999975  3456899999999999999999999987   99999999999999999999999999986532211 


Q ss_pred             CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCC
Q 006317          483 GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLR  561 (650)
Q Consensus       483 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~  561 (650)
                      .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   ...........         .....
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~i~~~~---------~~~~~  227 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVVEDISTGF---------RLYKP  227 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHHTTC---------CCCCC
T ss_pred             cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH---HHHHHHHhcCC---------cCCCC
Confidence            11223456788999999999999999999999999999999 8888763221   11111111110         01111


Q ss_pred             CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          562 NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       562 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ...+.   .+.+++.+||+.||++||++.++++.|+.
T Consensus       228 ~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          228 RLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             TTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCcH---HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11223   45567789999999999999999999875


No 104
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=3e-40  Score=343.55  Aligned_cols=264  Identities=22%  Similarity=0.280  Sum_probs=203.7

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec----CCeeE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----ETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  396 (650)
                      ..++|+..+.||+|+||.||+++. .+++.||||++..........+.+|+.++++++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            456899999999999999999986 5689999999977666666789999999999999999999999873    44788


Q ss_pred             EEEecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          397 LIYEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      +||||+++|+|.+++.... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            9999999999999997532 2466999999999999999999999987   99999999999999999999999999875


Q ss_pred             cccCCCCC-------ccceeecCccccChhccccCC---CCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHH
Q 006317          476 FEMDQSQG-------DTSRIVGTFGYMAPEYVTRGH---FSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWK  545 (650)
Q Consensus       476 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~  545 (650)
                      ........       ......||+.|+|||++....   ++.++||||||+++|||++|+.||........ .. .....
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~-~~~~~  261 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SV-ALAVQ  261 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CH-HHHHH
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hh-hHHhh
Confidence            43211110       112345799999999987554   68999999999999999999999853111100 01 11111


Q ss_pred             hccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          546 NWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       546 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      .   .     .........+   ..+.+++.+||+.||.+|||+.+|++.|+....
T Consensus       262 ~---~-----~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          262 N---Q-----LSIPQSPRHS---SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             C---C-------CCCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             c---c-----CCCCccccCC---HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            0   0     0000011122   345577789999999999999999999987543


No 105
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=7.5e-41  Score=373.02  Aligned_cols=262  Identities=26%  Similarity=0.414  Sum_probs=208.8

Q ss_pred             HhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      +...++|++.++||+|+||.||+|++.++..||||+++.... ...+|.+|+.+|++++||||+++++++.+ +..+|||
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~  340 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT  340 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence            344567888999999999999999998888899999976543 34579999999999999999999999876 6789999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.++|... ....+++..++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.....
T Consensus       341 e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  416 (535)
T 2h8h_A          341 EYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN  416 (535)
T ss_dssp             CCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred             ehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence            999999999999643 2356999999999999999999999987   999999999999999999999999999865422


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .. .......++..|+|||++..+.++.++||||||++||||++ |+.|+....   ..+.+........         .
T Consensus       417 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~---~~~~~~~i~~~~~---------~  483 (535)
T 2h8h_A          417 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV---NREVLDQVERGYR---------M  483 (535)
T ss_dssp             HH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC---HHHHHHHHHTTCC---------C
T ss_pred             ce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCC---------C
Confidence            11 11122346788999999999999999999999999999999 888875322   1222222211110         0


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSL  603 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~  603 (650)
                      ......++   .+.+|+.+||+.||++|||+.+|+++|+......
T Consensus       484 ~~~~~~~~---~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          484 PCPPECPE---SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            11112333   3456777999999999999999999998764433


No 106
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.1e-39  Score=345.95  Aligned_cols=252  Identities=23%  Similarity=0.313  Sum_probs=192.3

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|+..++||+|+||.||+++.. +++.||||++..... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3468999999999999999999865 688999999976433 23468899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC--eEEeeeeccccccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI--PKISDFGMARLFEM  478 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DFGla~~~~~  478 (650)
                      |+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.  +||+|||+++....
T Consensus        97 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           97 YASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            9999999999863   456999999999999999999999987   999999999999988775  99999999974332


Q ss_pred             CCCCCccceeecCccccChhccccCCCCcc-ccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIK-SDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      .   .......||+.|+|||++.+..++.+ +||||||+++|||++|+.||.......  .............       
T Consensus       171 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~-------  238 (361)
T 3uc3_A          171 H---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVK-------  238 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTC-------
T ss_pred             c---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCC-------
Confidence            1   22334579999999999988887765 899999999999999999986433221  1111111111100       


Q ss_pred             ccCCC--CChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 PTLRN--GSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ~~l~~--~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+..  ...   ..+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~s---~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          239 YSIPDDIRIS---PECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CCCCTTSCCC---HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCCCcCCCC---HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            00110  122   345567789999999999999999854


No 107
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-39  Score=339.21  Aligned_cols=245  Identities=23%  Similarity=0.309  Sum_probs=201.0

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|+..+.||+|+||.||+++.. +|+.||+|++++...   .....+.+|..+++.++||||+++++++.+....++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            57889999999999999999865 588999999976422   23456788999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.... 
T Consensus        86 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-  158 (318)
T 1fot_A           86 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-  158 (318)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence            99999999999973   457999999999999999999999987   99999999999999999999999999986532 


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                          ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ..........   ..       ..
T Consensus       159 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~i~~---~~-------~~  221 (318)
T 1fot_A          159 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN---TMKTYEKILN---AE-------LR  221 (318)
T ss_dssp             ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHHHHH---CC-------CC
T ss_pred             ----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHh---CC-------CC
Confidence                2334679999999999999999999999999999999999999986322   1111111111   10       11


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~  595 (650)
                      +......   .+.+++.+||+.||++||     +++||++.
T Consensus       222 ~p~~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          222 FPPFFNE---DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             CCTTSCH---HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCH---HHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            1122233   345667799999999999     89999843


No 108
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=8.1e-40  Score=350.54  Aligned_cols=252  Identities=20%  Similarity=0.324  Sum_probs=195.1

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCC--CCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ--HRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..+|++.+.||+|+||.||++...+++.||||++....  ......+.+|+.++.+++  ||||+++++++..++..++|
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            35699999999999999999998889999999986543  334457899999999996  59999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      || +.+++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+ ++.+||+|||+++.+..
T Consensus       135 ~E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EE-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             Ee-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            99 678899999974   457899999999999999999999987   99999999999995 58999999999987654


Q ss_pred             CCCCCccceeecCccccChhcccc-----------CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTR-----------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      ...........||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....     .........
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~  281 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAII  281 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHH
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHh
Confidence            433333345679999999999865           4689999999999999999999999863211     111111111


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ....     ..........   .+.+++.+||+.||++|||+.||++.
T Consensus       282 ~~~~-----~~~~~~~~~~---~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          282 DPNH-----EIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CTTS-----CCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             Cccc-----cCCCCccchH---HHHHHHHHHcccChhhCCCHHHHhhC
Confidence            1110     0011111223   45567779999999999999999864


No 109
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.6e-40  Score=355.49  Aligned_cols=260  Identities=20%  Similarity=0.242  Sum_probs=204.4

Q ss_pred             hhhHHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeec
Q 006317          316 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFE  391 (650)
Q Consensus       316 ~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  391 (650)
                      ...++...++|+..++||+|+||.||+++.. +++.||+|++.+...   .....+.+|+.++..++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4455667789999999999999999999875 478899999865321   122347899999999999999999999999


Q ss_pred             CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          392 ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       392 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                      +...++||||+++|+|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG  213 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG  213 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccc
Confidence            9999999999999999998853    46899999999999999999999987   9999999999999999999999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccCC----CCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGH----FSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      +++....... .......||+.|+|||++.+..    ++.++|||||||++|||++|+.||.....   ...........
T Consensus       214 ~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~~~i~~~~  289 (410)
T 3v8s_A          214 TCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTYSKIMNHK  289 (410)
T ss_dssp             TCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHTHH
T ss_pred             eeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh---hhHHHHHHhcc
Confidence            9986543221 1233467999999999998765    78999999999999999999999863321   12221111100


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCC--CCCHHHHHHH
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVAN--RPTMASVVVM  595 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~--RPt~~evl~~  595 (650)
                         ....  -+ .......+   +.+++.+||+.+|.+  ||++.||++.
T Consensus       290 ---~~~~--~p-~~~~~s~~---~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          290 ---NSLT--FP-DDNDISKE---AKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ---HHCC--CC-TTCCCCHH---HHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ---cccc--CC-CcccccHH---HHHHHHHHccChhhhCCCCCHHHHhcC
Confidence               0000  00 01122333   445666899999998  9999999965


No 110
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=4.2e-40  Score=335.65  Aligned_cols=251  Identities=21%  Similarity=0.275  Sum_probs=202.1

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|+..++||+|+||.||+++... +..||+|++..........+.+|+.++++++||||+++++++.+....++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            45679999999999999999998654 67899999987666666789999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeecccccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARLFE  477 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~~  477 (650)
                      |+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||++....
T Consensus        87 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           87 LCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            9999999998874   456999999999999999999999987   9999999999999   888999999999998665


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ...   ......||+.|+|||.+.+ .++.++||||||+++|||++|+.|+.....   ............  ....   
T Consensus       161 ~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~--~~~~---  228 (277)
T 3f3z_A          161 PGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD---SEVMLKIREGTF--TFPE---  228 (277)
T ss_dssp             TTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCCC--CCCH---
T ss_pred             Ccc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhCCC--CCCc---
Confidence            322   2334578999999998865 489999999999999999999999864321   111111111100  0000   


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      . .....+   ..+.+++.+||+.||++|||+.++++
T Consensus       229 ~-~~~~~~---~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          229 K-DWLNVS---PQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             H-HHTTSC---HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             h-hhhcCC---HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 000112   34557778999999999999999974


No 111
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=8.5e-40  Score=331.69  Aligned_cols=252  Identities=23%  Similarity=0.363  Sum_probs=200.1

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecC--CeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEE--TERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~  399 (650)
                      ++|...+.||+|+||.||+|+.. ++.||||++....  ......+.+|+.++++++||||+++++++.+.  ...++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            57888999999999999999984 8899999997653  33445789999999999999999999999877  7889999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++... ....+++..++.++.||+.||+|||+.+ .+++||||||+|||++.++.++|.|||++....  
T Consensus        89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--  164 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--  164 (271)
T ss_dssp             ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred             cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence            999999999999742 2335999999999999999999999864 359999999999999999999999999875422  


Q ss_pred             CCCCccceeecCccccChhccccCCCCc---cccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSI---KSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                           .....||+.|+|||.+.+..++.   ++||||||+++|||++|+.|+.....   .........   ..     .
T Consensus       165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~---~~-----~  228 (271)
T 3kmu_A          165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN---MEIGMKVAL---EG-----L  228 (271)
T ss_dssp             -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH---HHHHHHHHH---SC-----C
T ss_pred             -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh---HHHHHHHHh---cC-----C
Confidence                 12346899999999998765444   89999999999999999999863221   111111111   11     1


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      .+.+....+.+   +.+++..||+.||++|||+.|+++.|+..
T Consensus       229 ~~~~~~~~~~~---~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          229 RPTIPPGISPH---VSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             CCCCCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            11222223333   45677789999999999999999998753


No 112
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.1e-39  Score=332.00  Aligned_cols=253  Identities=25%  Similarity=0.398  Sum_probs=202.2

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|+..+.||+|+||.||+++.. +++.||||++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            357889999999999999999865 58899999986543 2344578999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++.   ....+++..++.++.||+.||+|||+.+   ++||||||+||+++.++.+||+|||++.......
T Consensus        86 ~~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ecCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            999999999885   3456999999999999999999999987   9999999999999999999999999998665433


Q ss_pred             CCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                      .........||..|+|||.+.+..+ +.++||||||+++|||++|+.||....... .....  +.   .....  ..+ 
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~--~~---~~~~~--~~~-  230 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSD--WK---EKKTY--LNP-  230 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHH--HH---TTCTT--STT-
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHH--hh---hcccc--cCc-
Confidence            2233345678999999999987765 789999999999999999999986433221 11111  11   11000  000 


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                       ....+   ..+.+++..||+.||++|||+.|+++
T Consensus       231 -~~~~~---~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          231 -WKKID---SAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             -GGGSC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -hhhcC---HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence             00112   24456778999999999999999975


No 113
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=5.9e-40  Score=345.27  Aligned_cols=248  Identities=24%  Similarity=0.320  Sum_probs=200.9

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  396 (650)
                      ..++|...+.||+|+||.||+++.+ +|+.||||++++..   ......+..|..++..+ +||||+++++++.+.+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            4578999999999999999999975 58899999997642   22344677899998876 9999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++..
T Consensus        95 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            99999999999999874   457999999999999999999999987   999999999999999999999999999754


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ...  ........||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...+.......          
T Consensus       169 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~~~~~i~~~----------  233 (345)
T 1xjd_A          169 MLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD---EEELFHSIRMD----------  233 (345)
T ss_dssp             CCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHC----------
T ss_pred             ccC--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC---HHHHHHHHHhC----------
Confidence            322  123445689999999999999999999999999999999999999986332   12222211111          


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHH-HHH
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMA-SVV  593 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~-evl  593 (650)
                      .+.+......   .+.+++.+||+.||++||++. +|+
T Consensus       234 ~~~~p~~~s~---~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          234 NPFYPRWLEK---EAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CCCCCTTSCH---HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CCCCCcccCH---HHHHHHHHHhcCCHhHcCCChHHHH
Confidence            1111222233   345677799999999999998 665


No 114
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.1e-39  Score=341.39  Aligned_cols=254  Identities=23%  Similarity=0.294  Sum_probs=199.5

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ++|+..+.||+|+||.||+++.. +++.||||++.+...   .....+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57888999999999999999865 488999999976532   2344578899999988 899999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++....
T Consensus        89 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            999999999999873   457999999999999999999999987   99999999999999999999999999975332


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc--chhHHHHHHhccCCCccccc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA--EDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~i  556 (650)
                      .  ........||+.|+|||++.+..++.++|||||||++|||++|+.||........  ...............     
T Consensus       163 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  235 (345)
T 3a8x_A          163 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  235 (345)
T ss_dssp             T--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-----
T ss_pred             C--CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-----
Confidence            1  1234456899999999999999999999999999999999999999864221110  011111111111110     


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCH------HHHHH
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTM------ASVVV  594 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~------~evl~  594 (650)
                       ..+......   .+.+++.+||+.||++||++      .|+++
T Consensus       236 -~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          236 -IRIPRSLSV---KAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             -CCCCTTSCH---HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             -CCCCCCCCH---HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence             111122233   34567779999999999995      56663


No 115
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=1.3e-40  Score=339.72  Aligned_cols=256  Identities=29%  Similarity=0.464  Sum_probs=204.6

Q ss_pred             hccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      ..++|+..+.||+|+||.||+|+..++..||||++..... ....+.+|+.++++++||||+++++++. .+..++||||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   88 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY   88 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence            4567889999999999999999988888999999976543 3457899999999999999999999886 4568999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      +++++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.......
T Consensus        89 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T 1qpc_A           89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (279)
T ss_dssp             CTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             CCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence            9999999998642 2236999999999999999999999987   99999999999999999999999999987653221


Q ss_pred             CCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                       .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+....   ..+.........         ....
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~~~~~~~~~---------~~~~  231 (279)
T 1qpc_A          165 -TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT---NPEVIQNLERGY---------RMVR  231 (279)
T ss_dssp             -ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC---HHHHHHHHHTTC---------CCCC
T ss_pred             -ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC---HHHHHHHHhccc---------CCCC
Confidence             11223456788999999998899999999999999999999 888875322   112222111110         1111


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ....+.   .+.+++..||+.||++|||+.+|+++|+..
T Consensus       232 ~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          232 PDNCPE---ELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             CTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccccH---HHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            122233   455677799999999999999999998753


No 116
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.9e-39  Score=336.61  Aligned_cols=264  Identities=21%  Similarity=0.294  Sum_probs=196.9

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch--hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ++|+..++||+|+||.||+++.. +|+.||||++......  ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57889999999999999999875 4889999998665332  24568899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++.   ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~~~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           83 YCDHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             CCSEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             eCCCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            999999998876   3466999999999999999999999987   9999999999999999999999999998654322


Q ss_pred             CCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHH--------HHhccCCC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYA--------WKNWNEGT  551 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~~  551 (650)
                        .......||..|+|||++.+ ..++.++||||||+++|||++|+.||......+........        +..+....
T Consensus       157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (311)
T 4agu_A          157 --DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ  234 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred             --cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence              22234578999999999976 67899999999999999999999998643322211111110        00000000


Q ss_pred             cc---cccCccCCCC----ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          552 AL---NLIDPTLRNG----SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       552 ~~---~~id~~l~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..   ...++.....    .+.....+.+++..||+.||++|||++|+++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00   0001100000    01112345678889999999999999999854


No 117
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.6e-39  Score=340.00  Aligned_cols=249  Identities=24%  Similarity=0.290  Sum_probs=192.9

Q ss_pred             ccCCCcCCcccccCceeEEEeec----cCCcceeEeeccccCc----hhHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNSV----QGELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      .++|+..+.||+|+||.||+++.    .+++.||||++++...    .....+.+|+.++++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46789999999999999999986    4688999999976532    233457889999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+++++|.+++..   ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            9999999999999999873   456899999999999999999999987   9999999999999999999999999997


Q ss_pred             ccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      ......  .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...........        
T Consensus       170 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~--------  236 (327)
T 3a62_A          170 ESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN---RKKTIDKILKC--------  236 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHHHT--------
T ss_pred             ccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhC--------
Confidence            543221  12234579999999999999999999999999999999999999986322   11222211111        


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHH
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVM  595 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~  595 (650)
                        ...+......   .+.+++.+||+.||++||     ++.|+++.
T Consensus       237 --~~~~p~~~~~---~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          237 --KLNLPPYLTQ---EARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             --CCCCCTTSCH---HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             --CCCCCCCCCH---HHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence              0111122233   345677799999999999     78888754


No 118
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=8.8e-40  Score=335.04  Aligned_cols=253  Identities=23%  Similarity=0.328  Sum_probs=196.8

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ..++|...++||+|+||.||+++.. ++..+|+|++.... ......+.+|+.++++++||||+++++++.+....++||
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            3467899999999999999999864 58899999987653 234567899999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeecccc
Q 006317          400 EFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARL  475 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~  475 (650)
                      ||+++|+|.+++.... ....+++..++.++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||+++.
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence            9999999999987532 3467999999999999999999999987   9999999999999   5568899999999986


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      +....   ......||..|+|||++. +.++.++||||||+++|||++|+.||.....   .+.......  ..... ..
T Consensus       177 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~---~~~~~~~~~--~~~~~-~~  246 (285)
T 3is5_A          177 FKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL---EEVQQKATY--KEPNY-AV  246 (285)
T ss_dssp             -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHH--CCCCC-CC
T ss_pred             cCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH---HHHHhhhcc--CCccc-cc
Confidence            54322   233457899999999875 5789999999999999999999999863321   111111111  01000 00


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                          ......   ..+.+++.+||+.||++|||+.||++
T Consensus       247 ----~~~~~~---~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          247 ----ECRPLT---PQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             ------CCCC---HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ----ccCcCC---HHHHHHHHHHccCChhhCcCHHHHhc
Confidence                001122   34456777999999999999999985


No 119
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-40  Score=344.90  Aligned_cols=255  Identities=28%  Similarity=0.482  Sum_probs=197.0

Q ss_pred             cCCCcCCcccccCceeEEEeeccC-----CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ++|...+.||+|+||.||+|+...     +..||||++..... .....+.+|+.++++++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            567778999999999999998643     23599999976533 344578999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       124 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          124 ITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            9999999999999974  3457999999999999999999999987   9999999999999999999999999998765


Q ss_pred             cCCCCC-ccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          478 MDQSQG-DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       478 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ...... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   .++........        
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~~~~~~~~~--------  267 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HEVMKAINDGF--------  267 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHHTTC--------
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHCCC--------
Confidence            332211 2223456788999999999999999999999999999999 9998853221   12222111110        


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       ........+.   .+.+++.+||+.||++||++.+|++.|+.
T Consensus       268 -~~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          268 -RLPTPMDCPS---AIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             -CCCCCTTCBH---HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -cCCCcccCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             0111112233   35567789999999999999999999875


No 120
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3.3e-40  Score=344.90  Aligned_cols=250  Identities=22%  Similarity=0.281  Sum_probs=177.2

Q ss_pred             CCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCceeeecceeecCCeeEEEEecCCCCC
Q 006317          329 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEETERLLIYEFVPNSS  406 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e~~~~gs  406 (650)
                      .++||+|+||.||+++.. +++.||||++...   ....+.+|+.++.+++ ||||+++++++.++...++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            478999999999999865 5889999999653   3446788999999997 9999999999999999999999999999


Q ss_pred             hhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC---CeEEeeeecccccccCCCCC
Q 006317          407 VDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM---IPKISDFGMARLFEMDQSQG  483 (650)
Q Consensus       407 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DFGla~~~~~~~~~~  483 (650)
                      |.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++   .+||+|||+++......  .
T Consensus        93 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~  164 (325)
T 3kn6_A           93 LFERIKK---KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--Q  164 (325)
T ss_dssp             HHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--C
Confidence            9999973   467999999999999999999999987   99999999999998766   89999999998654322  2


Q ss_pred             ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCC
Q 006317          484 DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNG  563 (650)
Q Consensus       484 ~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~  563 (650)
                      ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....................+..      .....
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~  238 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------SFEGE  238 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC------CCCSH
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC------CCCcc
Confidence            233457899999999999999999999999999999999999998743322111111111111111110      00000


Q ss_pred             C-hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          564 S-SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       564 ~-~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      . ......+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            0 0112345677889999999999999998744


No 121
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=7.5e-40  Score=334.64  Aligned_cols=249  Identities=23%  Similarity=0.400  Sum_probs=201.9

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec---------
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE---------  391 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---------  391 (650)
                      ..++|+..+.||+|+||.||+++.. +++.||||++....    ..+.+|+.++++++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            3467889999999999999999875 68999999997653    246789999999999999999998754         


Q ss_pred             -------CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC
Q 006317          392 -------ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI  464 (650)
Q Consensus       392 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~  464 (650)
                             ....++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+   |+||||||+|||+++++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence                   34578999999999999999753 3467999999999999999999999987   999999999999999999


Q ss_pred             eEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          465 PKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       465 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      +||+|||++.......   ......||+.|+|||.+.+..++.++||||||+++|||++|..|+...     ..    .+
T Consensus       161 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~----~~  228 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SK----FF  228 (284)
T ss_dssp             EEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HH----HH
T ss_pred             EEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HH----HH
Confidence            9999999998665332   223356899999999999999999999999999999999998875310     01    11


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                      ......        .+....+.+   +.+++.+||+.||++|||+.|+++.|.....
T Consensus       229 ~~~~~~--------~~~~~~~~~---~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          229 TDLRDG--------IISDIFDKK---EKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHTT--------CCCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHhhcc--------cccccCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            111111        111222333   4567779999999999999999999976543


No 122
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=9.8e-41  Score=347.76  Aligned_cols=265  Identities=25%  Similarity=0.368  Sum_probs=200.7

Q ss_pred             cCC-CcCCcccccCceeEEEeecc-----CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecC--Ce
Q 006317          324 NNF-STDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEE--TE  394 (650)
Q Consensus       324 ~~f-~~~~~LG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~  394 (650)
                      ++| +..++||+|+||.||++.+.     +++.||||++..... .....+.+|+.++++++||||+++++++.+.  ..
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            444 88999999999999887542     578899999986543 3455689999999999999999999999874  57


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+++|+|.+++..    ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       110 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccc
Confidence            8999999999999999853    45999999999999999999999987   9999999999999999999999999998


Q ss_pred             ccccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          475 LFEMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       475 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ........ .......||..|+|||++.+..++.++||||||+++|||++|+.|+....... .....+...........
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~  261 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLT  261 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHH
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchhHHHHH
Confidence            76543221 12233457888999999999999999999999999999999999875321100 00000000000000000


Q ss_pred             cccCc----cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          554 NLIDP----TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       554 ~~id~----~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      +.++.    ......+   ..+.+++.+||+.||++|||+.|+++.|+..
T Consensus       262 ~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          262 ELLERGERLPRPDKCP---AEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhcccCCCCCcccc---HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            11111    1111222   3455677799999999999999999999753


No 123
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.5e-39  Score=343.04  Aligned_cols=245  Identities=22%  Similarity=0.244  Sum_probs=201.8

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|+..+.||+|+||.||+++.. +|+.||||++.+...   .....+.+|+.++++++||||+++++++.+....++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57889999999999999999865 588999999965422   23456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.... 
T Consensus       121 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-  193 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-  193 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS-
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccC-
Confidence            99999999999974   356999999999999999999999987   99999999999999999999999999986542 


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                          ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...+......    +.      ..
T Consensus       194 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~~~~~i~~----~~------~~  256 (350)
T 1rdq_E          194 ----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ---PIQIYEKIVS----GK------VR  256 (350)
T ss_dssp             ----CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHH----CC------CC
T ss_pred             ----CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC---HHHHHHHHHc----CC------CC
Confidence                2234679999999999999999999999999999999999999986322   1122211111    10      11


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCC-----HHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPT-----MASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~evl~~  595 (650)
                      +......   .+.+++.+||+.||++||+     +.||++.
T Consensus       257 ~p~~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          257 FPSHFSS---DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CCTTCCH---HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCH---HHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            1122233   3456777999999999998     8888753


No 124
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=7.9e-40  Score=350.73  Aligned_cols=205  Identities=19%  Similarity=0.267  Sum_probs=177.1

Q ss_pred             hccCCCcCCccccc--CceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          322 ATNNFSTDNKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G--~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ..++|++.++||+|  +||.||+++.. +|+.||||++....  ......+.+|+.++++++||||+++++++.+++..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45789999999999  99999999975 58999999997653  233456888999999999999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++...
T Consensus       103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            999999999999998753 2356999999999999999999999987   999999999999999999999999998654


Q ss_pred             ccCCC-----CCccceeecCccccChhcccc--CCCCccccccchhHHHHHHHhCCCCCCC
Q 006317          477 EMDQS-----QGDTSRIVGTFGYMAPEYVTR--GHFSIKSDVFSFGVLVLEIISGQKNNSF  530 (650)
Q Consensus       477 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDV~S~Gvll~elltG~~p~~~  530 (650)
                      .....     ........||..|+|||++.+  ..++.++|||||||++|||++|+.||..
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  239 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  239 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            32211     112233478999999999987  5789999999999999999999999864


No 125
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=8.4e-40  Score=347.44  Aligned_cols=255  Identities=15%  Similarity=0.148  Sum_probs=204.1

Q ss_pred             hhHHhhccCCCcCCcccccCceeEEEee------ccCCcceeEeeccccCchhHHHHHHHHHHHhhCC---CCceeeecc
Q 006317          317 STIRDATNNFSTDNKLGQGGFGAVYKGR------LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLG  387 (650)
Q Consensus       317 ~~~~~~~~~f~~~~~LG~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g  387 (650)
                      .++....++|.+.++||+|+||.||+|.      ...++.||||++....   ..++..|+.++.+++   |+||+++++
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            3344556789999999999999999994      4458899999997653   346778888888886   999999999


Q ss_pred             eeecCCeeEEEEecCCCCChhHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC----
Q 006317          388 FSFEETERLLIYEFVPNSSVDKFIFDAI--KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA----  461 (650)
Q Consensus       388 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~----  461 (650)
                      ++...+..++||||+++|+|.+++....  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.    
T Consensus       135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTC
T ss_pred             eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccC
Confidence            9999999999999999999999997532  2456999999999999999999999987   999999999999998    


Q ss_pred             -------CCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCc
Q 006317          462 -------DMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGE  534 (650)
Q Consensus       462 -------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~  534 (650)
                             ++.+||+|||+++.+.............||..|+|||++.+..++.++|||||||++|||+||+.|+......
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  291 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG  291 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence                   8999999999997655333333445567999999999999999999999999999999999999987532211


Q ss_pred             ccchhHHHHHHhccCCCcccccCccCCCC-ChHHHHHHHHHHhcccccCCCCC-CCHHHHHHHhcC
Q 006317          535 EAEDLLTYAWKNWNEGTALNLIDPTLRNG-SSSEIMRCVHIGLLCVQENVANR-PTMASVVVMLNS  598 (650)
Q Consensus       535 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~~~l~~~Cl~~~p~~R-Pt~~evl~~L~~  598 (650)
                      .                  ..+...+... ..+.+   .+++..|++.+|.+| |++.++.+.|+.
T Consensus       292 ~------------------~~~~~~~~~~~~~~~~---~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          292 E------------------CKPEGLFRRLPHLDMW---NEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             E------------------EEECSCCTTCSSHHHH---HHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             c------------------eeechhccccCcHHHH---HHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence            0                  0011112111 23333   356668999999999 678888877764


No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.6e-40  Score=351.24  Aligned_cols=270  Identities=21%  Similarity=0.304  Sum_probs=208.4

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCC--eeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEET--ERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv  398 (650)
                      .++|.+.++||+|+||.||+|+... |+.||||++..... .....+.+|++++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            4678999999999999999998754 88999999976433 33456789999999999999999999988755  67999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe----CCCCCeEEeeeeccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL----DADMIPKISDFGMAR  474 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~DFGla~  474 (650)
                      |||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+||||    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999976544455999999999999999999999987   9999999999999    788889999999998


Q ss_pred             ccccCCCCCccceeecCccccChhcccc--------CCCCccccccchhHHHHHHHhCCCCCCCCCCc-ccchhHHHHHH
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTR--------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGE-EAEDLLTYAWK  545 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~-~~~~l~~~~~~  545 (650)
                      ......   ......||..|+|||++.+        ..++.++||||||+++|||++|+.||...... ...+.......
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            764322   2234569999999999875        56788999999999999999999998643322 22222222222


Q ss_pred             hccCCCccccc---------CccCC--CC-ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          546 NWNEGTALNLI---------DPTLR--NG-SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       546 ~~~~~~~~~~i---------d~~l~--~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..........-         ...+.  .. .......+.+++..||+.||++||++.|+++.+..
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            11111110000         00111  11 23344556688899999999999999999988754


No 127
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=9.7e-40  Score=332.69  Aligned_cols=245  Identities=22%  Similarity=0.340  Sum_probs=177.9

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.++||+|+||.||+++. .+++.||+|++.....   .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            5799999999999999999985 4688999999976432   23457889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+ +++|.+++.   ....+++..++.++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++......
T Consensus        93 e~~-~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  165 (275)
T 2eue_A           93 EYA-GNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred             hhc-CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence            999 678888776   3467999999999999999999999987   999999999999999999999999999765432


Q ss_pred             CCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .   ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.|+....   ...........    .      .
T Consensus       166 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~~~~~----~------~  229 (275)
T 2eue_A          166 N---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES---IPVLFKNISNG----V------Y  229 (275)
T ss_dssp             ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHT----C------C
T ss_pred             c---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhC----C------C
Confidence            2   2234568999999999988765 789999999999999999999986322   11111111111    0      1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .+......   .+.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~---~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          230 TLPKFLSP---GAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CCCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCccCCH---HHHHHHHHHhhcCHhHCCCHHHHhh
Confidence            11122233   3456777999999999999999974


No 128
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.8e-39  Score=332.05  Aligned_cols=253  Identities=23%  Similarity=0.323  Sum_probs=202.0

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..+.||+|+||.||++... +++.||+|++....  ......+.+|+.++++++||||+++++++.++...++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            3578999999999999999999864 58899999986543  23345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC---eEEeeeecccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI---PKISDFGMARL  475 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGla~~  475 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||++..
T Consensus        84 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A           84 FDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence            999999999988864   457999999999999999999999987   999999999999987665   99999999976


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .....   ......||+.|+|||++.+..++.++||||||+++|||++|+.|+.....   ............     ..
T Consensus       158 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~~-----~~  226 (284)
T 3kk8_A          158 VNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYAQIKAGAY-----DY  226 (284)
T ss_dssp             CCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCC-----CC
T ss_pred             cccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch---hHHHHHHHhccc-----cC
Confidence            54322   22345789999999999999999999999999999999999999853221   122211111100     00


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+. ....++   .+.+++.+||+.||++|||+.|+++.
T Consensus       227 ~~~~-~~~~~~---~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          227 PSPE-WDTVTP---EAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             CTTT-TTTSCH---HHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             Cchh-hcccCH---HHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0010 011223   35567779999999999999999853


No 129
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=7.9e-40  Score=333.81  Aligned_cols=249  Identities=27%  Similarity=0.444  Sum_probs=181.0

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|...+.||+|+||.||+++. .+|+.||||++.....   .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46788999999999999999986 4688999999965422   2235688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           90 LEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EECCTTEEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EecCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            999999999999874  3457999999999999999999999987   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ...  ......||+.|+|||.+.+..++.++||||||+++|||++|+.|+........   .   ....       ..+.
T Consensus       165 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~---~~~~-------~~~~  229 (278)
T 3cok_A          165 PHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---L---NKVV-------LADY  229 (278)
T ss_dssp             -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC-------SSCC
T ss_pred             CCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---H---HHHh-------hccc
Confidence            221  22335789999999999998999999999999999999999999864322111   0   0000       0011


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .+....+.   .+.+++.+||+.||++|||+.++++
T Consensus       230 ~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          230 EMPSFLSI---EAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CCCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCccccCH---HHHHHHHHHcccCHhhCCCHHHHhc
Confidence            11122233   4456777999999999999999974


No 130
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=1.2e-39  Score=333.17  Aligned_cols=255  Identities=24%  Similarity=0.375  Sum_probs=200.3

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC----CcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ..++|...+.||+|+||.||+|+..+    +..||||++.... ......+.+|+.++++++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            45678999999999999999998543    3359999997653 3345678999999999999999999999765 4568


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus        89 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           89 IIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             EEEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             EEEecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccc
Confidence            99999999999999975  3456999999999999999999999987   999999999999999999999999999865


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ..... .......+|..|+|||.+.+..++.++||||||+++|||++ |+.|+......   +..........       
T Consensus       164 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~---~~~~~~~~~~~-------  232 (281)
T 3cc6_A          164 EDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK---DVIGVLEKGDR-------  232 (281)
T ss_dssp             ----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG---GHHHHHHHTCC-------
T ss_pred             ccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH---HHHHHHhcCCC-------
Confidence            43221 12233457889999999999999999999999999999999 99998643322   22222111110       


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                        .......++   .+.+++.+||+.||++||++.|+++.|+.
T Consensus       233 --~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          233 --LPKPDLCPP---VLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             --CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCCCCH---HHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence              011111223   35567779999999999999999999864


No 131
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.3e-40  Score=350.34  Aligned_cols=256  Identities=24%  Similarity=0.382  Sum_probs=190.4

Q ss_pred             cCCCcCCcccccCceeEEEeeccC----CcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeec-CCeeEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFE-ETERLL  397 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~l  397 (650)
                      ..|...++||+|+||.||+|++.+    +..||||.++... ......+.+|+.++++++||||+++++++.. ++..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            346677899999999999998643    2358999987543 3445679999999999999999999998754 567899


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..  ....+++..++.++.||++||+|||+.+   |+||||||+||||++++.+||+|||+++...
T Consensus       169 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             EEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccc
Confidence            9999999999999974  3456899999999999999999999987   9999999999999999999999999998654


Q ss_pred             cCCCC--CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          478 MDQSQ--GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       478 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      .....  .......+|..|+|||.+.+..++.++||||||+++|||+| |..|+......   +........    ..  
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~~~~~~----~~--  314 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYLLQG----RR--  314 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHHHHHTT----CC--
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHHHHHcC----CC--
Confidence            32211  12233457889999999999999999999999999999999 55555432222   222221111    00  


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                         .......+.   .+.+++.+||+.||++|||+.||++.|+..
T Consensus       315 ---~~~p~~~~~---~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          315 ---LLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             ---CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CCCCCCCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence               011112233   355677799999999999999999999763


No 132
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=2e-39  Score=338.24  Aligned_cols=253  Identities=25%  Similarity=0.329  Sum_probs=203.5

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch------hHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      ..++|++.+.||+|+||.||+++.. +|+.||||++......      ....+.+|+.++++++||||+++++++.+...
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            3467899999999999999999865 5889999998765322      35678999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC----CeEEeee
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM----IPKISDF  470 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DF  470 (650)
                      .++||||+++++|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++    .+||+||
T Consensus        90 ~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Df  163 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (321)
T ss_dssp             EEEEECCCCSCBHHHHHH---TCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccC
Confidence            999999999999999996   3457899999999999999999999987   99999999999999988    7999999


Q ss_pred             ecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          471 GMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       471 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      |+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ..+........    
T Consensus       164 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~i~~~----  233 (321)
T 2a2a_A          164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANITSV----  233 (321)
T ss_dssp             TTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHHHTT----
T ss_pred             ccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhc----
Confidence            9998665322   2234568999999999999999999999999999999999999986322   11121111110    


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .  ...++......+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       234 ~--~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          234 S--YDFDEEFFSHTS---ELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             C--CCCCHHHHTTCC---HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             c--cccChhhhcccC---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0  000111111122   235577889999999999999999864


No 133
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-39  Score=341.61  Aligned_cols=268  Identities=24%  Similarity=0.340  Sum_probs=198.5

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhh--CCCCceeeecceeecC---
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEE---  392 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~---  392 (650)
                      ......++|++.++||+|+||.||+|+.. ++.||||++....   ...+..|.+++..  ++||||+++++++...   
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            33445678999999999999999999875 8999999986432   2344555555555  4999999999999877   


Q ss_pred             -CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCcEEecCCCCCceEeCCCCCeE
Q 006317          393 -TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDS-----RLRIIHRDLKASNILLDADMIPK  466 (650)
Q Consensus       393 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~k  466 (650)
                       ...++||||+++|+|.+++..    ..+++..++.++.||+.||+|||+..     .++|+||||||+||||+.++.+|
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence             688999999999999999953    46999999999999999999999871     12399999999999999999999


Q ss_pred             EeeeecccccccCCCCC--ccceeecCccccChhccccCCCCcc------ccccchhHHHHHHHhC----------CCCC
Q 006317          467 ISDFGMARLFEMDQSQG--DTSRIVGTFGYMAPEYVTRGHFSIK------SDVFSFGVLVLEIISG----------QKNN  528 (650)
Q Consensus       467 l~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~------sDV~S~Gvll~elltG----------~~p~  528 (650)
                      |+|||+++.+.......  ......||+.|+|||++.+...+.+      +||||||+++|||+||          +.|+
T Consensus       183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~  262 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY  262 (337)
T ss_dssp             ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence            99999997654332221  1224579999999999988766655      9999999999999999          4554


Q ss_pred             CCCCCcccchhHHHHHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          529 SFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       529 ~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      .........  ..........    ....+.+...  ......++.+++.+||+.||++|||+.||++.|+..
T Consensus       263 ~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          263 HDLVPSDPS--YEDMREIVCI----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             TTTSCSSCC--HHHHHHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhcCCCCc--hhhhHHHHhh----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence            322211110  1111111111    1111211111  123445677889999999999999999999999753


No 134
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2e-40  Score=347.36  Aligned_cols=263  Identities=23%  Similarity=0.264  Sum_probs=191.1

Q ss_pred             HHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCceeeecceee------
Q 006317          319 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSF------  390 (650)
Q Consensus       319 ~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~------  390 (650)
                      +.....+|+..++||+|+||.||+++.. +++.||||++..........+.+|+.++.++. ||||+++++++.      
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES  102 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence            3344568999999999999999999864 68899999997766666677899999999996 999999999984      


Q ss_pred             --cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          391 --EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       391 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                        .....++||||+. |+|.+++........+++..++.++.||+.||+|||+.+ ++|+||||||+||||+.++.+||+
T Consensus       103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEe
Confidence              3345789999996 799999876555677999999999999999999999874 349999999999999999999999


Q ss_pred             eeecccccccCCCCC----------ccceeecCccccChhcc---ccCCCCccccccchhHHHHHHHhCCCCCCCCCCcc
Q 006317          469 DFGMARLFEMDQSQG----------DTSRIVGTFGYMAPEYV---TRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEE  535 (650)
Q Consensus       469 DFGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~  535 (650)
                      |||+++.........          ......||+.|+|||++   .+..++.++||||||+++|||++|+.|+.......
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~  260 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR  260 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence            999998765322211          11234689999999998   56678999999999999999999999985321110


Q ss_pred             cchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCC
Q 006317          536 AEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSL  601 (650)
Q Consensus       536 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~  601 (650)
                            ....         ............+   +.+++..||+.||++|||+.|+++.|.....
T Consensus       261 ------~~~~---------~~~~~~~~~~~~~---~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          261 ------IVNG---------KYSIPPHDTQYTV---FHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             --------------------CCCCTTCCSSGG---GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------hhcC---------cccCCcccccchH---HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                  0000         0000111112222   4467779999999999999999999976433


No 135
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.2e-40  Score=346.68  Aligned_cols=264  Identities=22%  Similarity=0.268  Sum_probs=200.6

Q ss_pred             hhHHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC-----chhHHHHHHHHHHHhhCCCCceeeecceee
Q 006317          317 STIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSF  390 (650)
Q Consensus       317 ~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  390 (650)
                      ..+....++|+..+.||+|+||.||+++.. +++.||+|++....     ......+.+|+.++++++||||+++++++.
T Consensus        19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   98 (345)
T 3hko_A           19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE   98 (345)
T ss_dssp             BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence            345567789999999999999999999864 57889999986542     234457899999999999999999999999


Q ss_pred             cCCeeEEEEecCCCCChhHHHHhhhc-------------------------------------cCCCCHHHHHHHHHHHH
Q 006317          391 EETERLLIYEFVPNSSVDKFIFDAIK-------------------------------------RVQLDWETRYKIIGGIA  433 (650)
Q Consensus       391 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia  433 (650)
                      +.+..++||||+++|+|.+++.....                                     ...+++..++.++.||+
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  178 (345)
T 3hko_A           99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF  178 (345)
T ss_dssp             CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence            99999999999999999998842100                                     11246778889999999


Q ss_pred             HHHHHhhhcCCCcEEecCCCCCceEeCCCC--CeEEeeeecccccccCCCCC--ccceeecCccccChhcccc--CCCCc
Q 006317          434 RGILYLHEDSRLRIIHRDLKASNILLDADM--IPKISDFGMARLFEMDQSQG--DTSRIVGTFGYMAPEYVTR--GHFSI  507 (650)
Q Consensus       434 ~~L~yLH~~~~~~iiHrDlk~~NILl~~~~--~~kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~s~  507 (650)
                      .||+|||+.+   |+||||||+||||+.++  .+||+|||+++.+.......  ......||+.|+|||++.+  ..++.
T Consensus       179 ~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          179 SALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence            9999999987   99999999999998777  89999999998664322211  2345679999999999875  67899


Q ss_pred             cccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCC
Q 006317          508 KSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRP  587 (650)
Q Consensus       508 ~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP  587 (650)
                      ++||||||+++|||++|+.||.....   .+.......   .....  ..+.. ....   ..+.+++.+||+.||++||
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~~~~---~~~~~--~~~~~-~~~~---~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVND---ADTISQVLN---KKLCF--ENPNY-NVLS---PLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHH---CCCCT--TSGGG-GGSC---HHHHHHHHHHSCSCTTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCh---HHHHHHHHh---ccccc--CCccc-ccCC---HHHHHHHHHHcCCChhHCC
Confidence            99999999999999999999863321   111111111   11000  00000 0112   3455677899999999999


Q ss_pred             CHHHHHHH
Q 006317          588 TMASVVVM  595 (650)
Q Consensus       588 t~~evl~~  595 (650)
                      ++.|+++-
T Consensus       324 s~~~~l~h  331 (345)
T 3hko_A          324 DAMRALQH  331 (345)
T ss_dssp             CHHHHHHS
T ss_pred             CHHHHhcC
Confidence            99999864


No 136
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-40  Score=336.59  Aligned_cols=256  Identities=26%  Similarity=0.353  Sum_probs=200.5

Q ss_pred             CCCcCCcccccCceeEEEeeccC----CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCee-EEE
Q 006317          325 NFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETER-LLI  398 (650)
Q Consensus       325 ~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lv  398 (650)
                      .|...++||+|+||.||+|+..+    +..||+|++..... .....+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            45667899999999999998533    23699999876433 3445789999999999999999999999876655 999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+.+|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus       102 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             EecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence            999999999999974  3467899999999999999999999987   99999999999999999999999999986543


Q ss_pred             CC--CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          479 DQ--SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       479 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ..  .........+|..|+|||.+.+..++.++||||||+++|||++|+.|+....  ...+..........        
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~--~~~~~~~~~~~~~~--------  246 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI--DPFDLTHFLAQGRR--------  246 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CGGGHHHHHHTTCC--------
T ss_pred             CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC--CHHHHHHHhhcCCC--------
Confidence            22  1122334567889999999999999999999999999999999776653221  12222222211110        


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                       .......++   .+.+++.+||+.||++|||+.+++++|+..
T Consensus       247 -~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          247 -LPQPEYCPD---SLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             -CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCCccchH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             111111223   455677799999999999999999998763


No 137
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=5.7e-40  Score=358.25  Aligned_cols=249  Identities=20%  Similarity=0.225  Sum_probs=193.3

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|+..++||+|+||.||+++.. +|+.||||++....   ......+.+|+.++++++||||+++++++...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467899999999999999999854 58899999997542   22334578899999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhh-cCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHE-DSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||+++...
T Consensus       227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999863   4579999999999999999999998 66   9999999999999999999999999997543


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ...  .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ..+.......   .       
T Consensus       301 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~i~~~---~-------  365 (446)
T 4ejn_A          301 KDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILME---E-------  365 (446)
T ss_dssp             C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHC---C-------
T ss_pred             CCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHHHHHhC---C-------
Confidence            221  223446799999999999999999999999999999999999999863321   2222221111   0       


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~  595 (650)
                      ..+......   .+.+++..||+.||++||     ++.|+++.
T Consensus       366 ~~~p~~~~~---~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          366 IRFPRTLGP---EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCccCCH---HHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            111112223   345677799999999999     99999854


No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=4.5e-40  Score=345.15  Aligned_cols=267  Identities=24%  Similarity=0.330  Sum_probs=192.7

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHH--HHhhCCCCceeeecceeec-----CCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVL--LVARLQHRNLVRLLGFSFE-----ETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~--~l~~l~H~niv~l~g~~~~-----~~~~  395 (650)
                      -++|+..++||+|+||.||+|+. +++.||||++.....   ..+..|.+  .+..++||||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            36788999999999999999987 689999999965432   23344444  4556899999999985532     2356


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC------CCcEEecCCCCCceEeCCCCCeEEee
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDS------RLRIIHRDLKASNILLDADMIPKISD  469 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlk~~NILl~~~~~~kl~D  469 (650)
                      ++||||+++|+|.+++..    ..+++..++.++.||+.||+|||+..      .++|+||||||+||||+.++.+||+|
T Consensus        88 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D  163 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD  163 (336)
T ss_dssp             EEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred             EEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence            899999999999999853    34589999999999999999999881      11399999999999999999999999


Q ss_pred             eecccccccCCC------CCccceeecCccccChhcccc-------CCCCccccccchhHHHHHHHhCCCCCCCCCCccc
Q 006317          470 FGMARLFEMDQS------QGDTSRIVGTFGYMAPEYVTR-------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA  536 (650)
Q Consensus       470 FGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~  536 (650)
                      ||+++.+.....      ........||+.|+|||++.+       ..++.++||||||+++|||++|+.|+........
T Consensus       164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~  243 (336)
T 3g2f_A          164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE  243 (336)
T ss_dssp             CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred             ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence            999987653221      112223469999999999976       3566789999999999999999877643222111


Q ss_pred             -chhHHH----------HHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          537 -EDLLTY----------AWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       537 -~~l~~~----------~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       ......          .............+.... .........+.+++.+||+.||++|||+.||++.|+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhhhcccCCCchHHHHHhhhcccccCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence             111100          000000011011111111 1122344567788999999999999999999999875


No 139
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.4e-39  Score=343.16  Aligned_cols=245  Identities=27%  Similarity=0.401  Sum_probs=196.7

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      +.|...+.||+|+||.||+|+. .+++.||||++.....   .....+.+|+.++++++||||+++++++..++..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588889999999999999985 5688999999975432   23346889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+. |+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.... 
T Consensus       134 e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             ECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             ecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            9997 688887754  3467999999999999999999999987   99999999999999999999999999976542 


Q ss_pred             CCCCccceeecCccccChhccc---cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVT---RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                           .....||+.|+|||++.   .+.++.++||||||+++|||++|+.|+.....   ...+.....   ..      
T Consensus       207 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~---~~~~~~~~~---~~------  269 (348)
T 1u5q_A          207 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQ---NE------  269 (348)
T ss_dssp             -----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHH---SC------
T ss_pred             -----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHh---cC------
Confidence                 22357899999999985   56789999999999999999999999853221   111111111   11      


Q ss_pred             CccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          557 DPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       557 d~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+.+. ...+++   +.+++.+||+.||++|||+.++++.
T Consensus       270 ~~~~~~~~~~~~---l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          270 SPALQSGHWSEY---FRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CCCCCCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCCCCHH---HHHHHHHHcccChhhCcCHHHHhhC
Confidence            11111 122333   4467779999999999999999854


No 140
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.8e-39  Score=355.12  Aligned_cols=246  Identities=23%  Similarity=0.383  Sum_probs=201.6

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|...+.||+|+||.||+|+.. +|+.||||++.....   .....+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            57889999999999999999865 689999999975432   23456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        96 E~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           96 EYVSGGELFDYIC---KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             ECCSSEEHHHHTT---SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             eCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            9999999999986   4567999999999999999999999987   999999999999999999999999999876432


Q ss_pred             CCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....   ...+......    +.      .
T Consensus       170 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---~~~~~~~i~~----~~------~  233 (476)
T 2y94_A          170 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH---VPTLFKKICD----GI------F  233 (476)
T ss_dssp             C---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS---SHHHHHHHHT----TC------C
T ss_pred             c---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC---HHHHHHHHhc----CC------c
Confidence            2   2334579999999999988765 689999999999999999999986322   1222221111    10      0


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ........   .+.+++.+||+.||++|||+.|+++
T Consensus       234 ~~p~~~s~---~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          234 YTPQYLNP---SVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CCCTTCCH---HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCccCCH---HHHHHHHHHcCCCchhCcCHHHHHh
Confidence            01111223   3556777999999999999999996


No 141
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.6e-39  Score=336.87  Aligned_cols=262  Identities=25%  Similarity=0.341  Sum_probs=195.7

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc-----hhHHHHHHHHHHHhhC---CCCceeeecceeecC
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV-----QGELEFKNEVLLVARL---QHRNLVRLLGFSFEE  392 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~  392 (650)
                      .+++|+..++||+|+||.||+++. .+++.||||++.....     .....+.+|+.+++++   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            457899999999999999999985 4688999999864321     1123566777777766   499999999999875


Q ss_pred             C-----eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEE
Q 006317          393 T-----ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKI  467 (650)
Q Consensus       393 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl  467 (650)
                      .     ..++||||+. ++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     4789999997 5999998743 2334999999999999999999999998   999999999999999999999


Q ss_pred             eeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          468 SDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       468 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      +|||+++.....   .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .+.........
T Consensus       162 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~  235 (308)
T 3g33_A          162 ADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLGKIFDLI  235 (308)
T ss_dssp             CSCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH---HHHHHHHHHHH
T ss_pred             eeCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHh
Confidence            999999865422   223446789999999999999999999999999999999999999864322   22222221111


Q ss_pred             c---CCCccc-------ccCccCCCC----ChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          548 N---EGTALN-------LIDPTLRNG----SSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       548 ~---~~~~~~-------~id~~l~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .   ...+..       .+.+.....    .+.....+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            1   000000       000000000    0011234567888999999999999999975


No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=2.3e-39  Score=330.65  Aligned_cols=248  Identities=26%  Similarity=0.393  Sum_probs=198.6

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      +.++|++.+.||+|+||.||+++.. +++.||||++.....   .....+.+|+.++++++||||+++++++.+.+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3467899999999999999999865 467899999865422   234568899999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++....
T Consensus        87 v~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             EECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            9999999999999874   356999999999999999999999987   9999999999999999999999999986443


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..    ......||..|+|||.+.+..++.++||||||+++|||++|+.|+.....   ..........          .
T Consensus       161 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~----------~  223 (279)
T 3fdn_A          161 SS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---QETYKRISRV----------E  223 (279)
T ss_dssp             -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHHT----------C
T ss_pred             cc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH---HHHHHHHHhC----------C
Confidence            22    22345789999999999999999999999999999999999999863221   1111111110          1


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+....++   .+.+++..||+.||++|||+.|+++.
T Consensus       224 ~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 FTFPDFVTE---GARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CCCCTTSCH---HHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCcCCH---HHHHHHHHHhccChhhCCCHHHHhhC
Confidence            111122233   34567779999999999999999964


No 143
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=6.5e-40  Score=340.87  Aligned_cols=262  Identities=24%  Similarity=0.301  Sum_probs=196.1

Q ss_pred             ccCCCcC-CcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEEE
Q 006317          323 TNNFSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       323 ~~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      .+.|.+. ++||+|+||.||+++.. +++.||||++..........+.+|+.++.++ +||||+++++++.+++..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            3567774 78999999999999854 6889999999876655566889999999985 7999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC---eEEeeeeccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI---PKISDFGMARLF  476 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGla~~~  476 (650)
                      ||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||+++..
T Consensus        91 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           91 EKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             EcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            99999999999974   457999999999999999999999987   999999999999998876   999999999765


Q ss_pred             ccCCC-----CCccceeecCccccChhcccc-----CCCCccccccchhHHHHHHHhCCCCCCCCCCcccch--------
Q 006317          477 EMDQS-----QGDTSRIVGTFGYMAPEYVTR-----GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAED--------  538 (650)
Q Consensus       477 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~--------  538 (650)
                      .....     ........||+.|+|||++.+     ..++.++||||||+++|||++|+.||......+...        
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence            42211     112223569999999999875     567899999999999999999999987543221000        


Q ss_pred             hHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          539 LLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       539 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .............. ..... .....+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       245 ~~~~~~~~i~~~~~-~~~~~-~~~~~~---~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          245 CQNMLFESIQEGKY-EFPDK-DWAHIS---CAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHHCCC-CCCHH-HHTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhccCc-ccCch-hcccCC---HHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            00000111100000 00000 000111   345678889999999999999999874


No 144
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.7e-39  Score=342.81  Aligned_cols=249  Identities=24%  Similarity=0.260  Sum_probs=200.9

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccC---chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|+..+.||+|+||.||+++... ++.||||++++..   ......+.+|..++..+ +||||+++++++.+.+..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4679999999999999999998754 7889999997642   22345678899999888 89999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus        99 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  172 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI  172 (353)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence            9999999999999874   356999999999999999999999987   9999999999999999999999999997533


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..  ........||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...+.......    .      
T Consensus       173 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~~~~~i~~~----~------  237 (353)
T 2i0e_A          173 WD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDELFQSIMEH----N------  237 (353)
T ss_dssp             CT--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHC----C------
T ss_pred             cC--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC---HHHHHHHHHhC----C------
Confidence            21  223445689999999999999999999999999999999999999986322   22222222111    0      


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCC-----HHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPT-----MASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~evl~~  595 (650)
                      ..+......   .+.+++.+||+.||++||+     +.+|++.
T Consensus       238 ~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          238 VAYPKSMSK---EAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCCCCCCH---HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            111122233   3456777999999999995     5777643


No 145
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.4e-39  Score=341.44  Aligned_cols=243  Identities=24%  Similarity=0.305  Sum_probs=199.3

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch--------hHHHHHHHHHHHhhCCCCceeeecceeecC
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ--------GELEFKNEVLLVARLQHRNLVRLLGFSFEE  392 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  392 (650)
                      ..++|+..+.||+|+||.||+++. .+++.||||++......        ....+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            457899999999999999999985 46889999999765321        222467899999999999999999999999


Q ss_pred             CeeEEEEecCCCC-ChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          393 TERLLIYEFVPNS-SVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       393 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                      +..++||||+.+| +|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHH---TCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999877 9999886   4457999999999999999999999987   9999999999999999999999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      +++.....   .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....            .    
T Consensus       176 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------~----  236 (335)
T 3dls_A          176 SAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------T----  236 (335)
T ss_dssp             TCEECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------------G----
T ss_pred             cceECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------------H----
Confidence            99876432   22344679999999999988876 8899999999999999999999852110            0    


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       ....+.+  ....+.   .+.+++..||+.||++|||+.|+++.
T Consensus       237 -~~~~~~~--~~~~~~---~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 -VEAAIHP--PYLVSK---ELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -TTTCCCC--SSCCCH---HHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -HhhccCC--CcccCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0000000  111233   35567779999999999999999875


No 146
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.1e-39  Score=336.24  Aligned_cols=259  Identities=24%  Similarity=0.374  Sum_probs=198.9

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC----CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceee-cCCee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSF-EETER  395 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~  395 (650)
                      ...+|+..++||+|+||.||+|+..+    ...+|+|.+..... .....+.+|+.++++++||||+++++++. .++..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            34568888999999999999998643    22589999876433 34457899999999999999999999865 45678


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.
T Consensus       103 ~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence            999999999999999974  3456899999999999999999999987   99999999999999999999999999986


Q ss_pred             cccCCC--CCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          476 FEMDQS--QGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       476 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ......  ........||+.|+|||.+.+..++.++||||||+++|||++|..|+....  ...+.........      
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~~~~~~------  249 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGR------  249 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS--CTTTHHHHHHTTC------
T ss_pred             ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC--CHHHHHHHHhcCC------
Confidence            543221  122334567889999999999999999999999999999999655433211  1112221111110      


Q ss_pred             cccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          554 NLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       554 ~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                         ........+.   .+.+++.+||+.||++|||+.|++++|+..
T Consensus       250 ---~~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          250 ---RLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             ---CCCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CCCCCccCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence               0111111233   355677799999999999999999999763


No 147
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=3.3e-39  Score=331.94  Aligned_cols=261  Identities=17%  Similarity=0.258  Sum_probs=200.8

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeeccee-ecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~  399 (650)
                      ..++|+..+.||+|+||.||+++. .+++.||||++......  ..+.+|+.++..++|++++..++.+ ......++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457899999999999999999985 56889999987554322  2478899999999998888777766 5667789999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeeccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARLF  476 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~  476 (650)
                      ||+ +++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||   ++++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 9999999874  3456999999999999999999999997   9999999999999   78999999999999876


Q ss_pred             ccCCCC-----CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC
Q 006317          477 EMDQSQ-----GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT  551 (650)
Q Consensus       477 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  551 (650)
                      ......     .......||..|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            543321     123356799999999999999999999999999999999999999975443333232222111100000


Q ss_pred             cccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          552 ALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       552 ~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       ..    .+....+   ..+.+++..||+.||++|||+.+|++.|+.
T Consensus       239 -~~----~~~~~~~---~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          239 -IE----VLCKGYP---SEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             -HH----HHTTTSC---HHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             -hh----hhhccCC---HHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence             00    0011122   245567779999999999999999999875


No 148
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1e-39  Score=341.36  Aligned_cols=259  Identities=29%  Similarity=0.469  Sum_probs=201.5

Q ss_pred             hccCCCcCCcccccCceeEEEeecc------CCcceeEeecccc-CchhHHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      ..++|...+.||+|+||.||+|++.      +++.||||++... .......+.+|+.++++++||||+++++++.....
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            3478999999999999999999842      4678999999754 33445578999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEE
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIK----RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKI  467 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl  467 (650)
                      .++||||+++++|.+++.....    ...+++..++.++.||+.||.|||+.+   |+||||||+||||+.   +..+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence            9999999999999999976321    145899999999999999999999987   999999999999994   446999


Q ss_pred             eeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHh
Q 006317          468 SDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKN  546 (650)
Q Consensus       468 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~  546 (650)
                      +|||+++...............||+.|+|||.+.+..++.++||||||+++|||+| |+.|+....   ...........
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~~~~~~~~~~  261 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSG  261 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHHHHTT
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC---HHHHHHHHhcC
Confidence            99999986554333333344567899999999999999999999999999999999 888875322   11222221111


Q ss_pred             ccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          547 WNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                          ..     +......+.   .+.+++.+||+.||++||++.+|++.|..
T Consensus       262 ----~~-----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          262 ----GR-----MDPPKNCPG---PVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             ----CC-----CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CC-----CCCCCCCCH---HHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence                00     111112233   45567779999999999999999999875


No 149
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.9e-40  Score=371.08  Aligned_cols=253  Identities=26%  Similarity=0.423  Sum_probs=196.9

Q ss_pred             CCCcCC-cccccCceeEEEeecc---CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          325 NFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       325 ~f~~~~-~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++...+ +||+|+||.||+|.+.   ++..||||+++.... ....++.+|+.+|++++|||||++++++.. +..++||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            333344 7999999999999764   456799999976533 345679999999999999999999999876 5689999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++|+|.+++..  ....+++..++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.....
T Consensus       415 E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          415 EMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             ECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            99999999999964  3456999999999999999999999987   999999999999999999999999999876433


Q ss_pred             CCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          480 QSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       480 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ... .......+|..|+|||++.+..++.++|||||||++|||+| |+.||......   +.......    +...    
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~~i~~----~~~~----  558 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFIEQ----GKRM----  558 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHHHHHT----TCCC----
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHHHHc----CCCC----
Confidence            221 11222345789999999999999999999999999999998 99998643322   22222211    1111    


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       ......+.   .+.+|+..||+.||++||++.+|++.|+.
T Consensus       559 -~~p~~~~~---~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          559 -ECPPECPP---ELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             -CCCTTCCH---HHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             -CCCCcCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence             11122333   45567779999999999999999999975


No 150
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.9e-39  Score=333.50  Aligned_cols=258  Identities=19%  Similarity=0.264  Sum_probs=195.8

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch---hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      -++|+..+.||+|+||.||+++.. +++.||||++......   ....+.+|+.++.+++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            367999999999999999999864 5889999999765332   235688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus       113 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          113 MRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             EECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred             EEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence            999999999999974   357999999999999999999999987   99999999999999999999999999976543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ... .......||..|+|||.+.+..++.++||||||+++|||++|+.||.....    ........  .......    
T Consensus       187 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~--~~~~~~~----  255 (309)
T 2h34_A          187 EKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL----SVMGAHIN--QAIPRPS----  255 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH----HHHHHHHH--SCCCCGG----
T ss_pred             ccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH----HHHHHHhc--cCCCCcc----
Confidence            221 223345789999999999999999999999999999999999999863211    11111111  0000001    


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCC-CHHHHHHHhcCCC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRP-TMASVVVMLNSSS  600 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-t~~evl~~L~~~~  600 (650)
                      ......+.   .+.+++.+||+.||++|| +++++++.|+...
T Consensus       256 ~~~~~~~~---~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          256 TVRPGIPV---AFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             GTSTTCCT---HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             ccCCCCCH---HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            11122233   344677799999999999 9999999998643


No 151
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4.6e-39  Score=331.02  Aligned_cols=262  Identities=18%  Similarity=0.258  Sum_probs=204.8

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeeccee-ecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~  399 (650)
                      ..++|+..+.||+|+||.||+|+. .+++.||||++......  ..+.+|+.++..++|++++..+.++ ......++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            357899999999999999999985 56899999998665432  3588999999999998877777665 5567789999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeeccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARLF  476 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~  476 (650)
                      ||+ +++|.+++..  ....+++..++.++.||+.||+|||+++   |+||||||+|||+   ++++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           85 ELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Eec-CCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            999 9999999864  3457999999999999999999999987   9999999999999   48899999999999876


Q ss_pred             ccCCCCC-----ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC
Q 006317          477 EMDQSQG-----DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT  551 (650)
Q Consensus       477 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  551 (650)
                      .......     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 3uzp_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence            5433211     23456799999999999999999999999999999999999999975433332222222211100000


Q ss_pred             cccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          552 ALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       552 ~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                       .    +.+....+.   .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       239 -~----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          239 -I----EVLCKGYPS---EFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             -H----HHHTTTSCH---HHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             -h----HHHHhhCCH---HHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence             0    001111223   355677799999999999999999999753


No 152
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-39  Score=334.81  Aligned_cols=255  Identities=26%  Similarity=0.426  Sum_probs=202.5

Q ss_pred             cCCCcCC-cccccCceeEEEeecc---CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          324 NNFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       324 ~~f~~~~-~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ++|.+.+ .||+|+||.||+|...   ++..||||++..... .....+.+|+.++++++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4555665 9999999999999753   477899999987533 3455789999999999999999999999 55678999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..  ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            999999999999864  3456999999999999999999999987   99999999999999999999999999987643


Q ss_pred             CCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCccccc
Q 006317          479 DQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       479 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i  556 (650)
                      .... .......||+.|+|||++.+..++.++||||||+++|||++ |+.|+......   +.......    ..     
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~i~~----~~-----  230 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFIEQ----GK-----  230 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHHHHT----TC-----
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHhc----CC-----
Confidence            3221 12223456889999999998899999999999999999999 99998643221   22221111    11     


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      .+......+.   .+.+++..||+.||++||++.+|++.|+..
T Consensus       231 ~~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          231 RMECPPECPP---ELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CCCCCTTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCcCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0111122333   455677799999999999999999998754


No 153
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=6e-39  Score=332.76  Aligned_cols=259  Identities=22%  Similarity=0.365  Sum_probs=195.0

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.+.||+|+||.||++.. .+|+.||||++....   ......+.+|+.++++++||||+++++++...+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            5788999999999999999985 468899999987532   334457889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          400 EFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      ||+++++|.+++.... ....+++..++.++.||+.||.|||+.+   ++||||||+||||+.++.+||+|||+++....
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            9999999999997533 3456999999999999999999999987   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..  .......|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...+.....    ....    .+
T Consensus       189 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~----~~~~----~~  257 (310)
T 2wqm_A          189 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIE----QCDY----PP  257 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHHHHH----TTCS----CC
T ss_pred             CC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHHHhh----cccC----CC
Confidence            22  1223456899999999999999999999999999999999999998532211 111111111    1110    01


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ......+.   .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       258 ~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          258 LPSDHYSE---ELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             CCTTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcccccCH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            11112233   345677799999999999999999999764


No 154
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-40  Score=347.81  Aligned_cols=263  Identities=25%  Similarity=0.425  Sum_probs=203.7

Q ss_pred             ccCCCcCCcccccCceeEEEeec-----cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCC--ee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEET--ER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~  395 (650)
                      .++|+..++||+|+||.||++++     .+++.||||++..........+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35688899999999999999983     358899999998776666678999999999999999999999887654  78


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       120 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEEECCCTTCBHHHHHHH--STTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            999999999999999975  3356999999999999999999999987   99999999999999999999999999987


Q ss_pred             cccCCCCC-ccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCc---------ccchhHHHHHH
Q 006317          476 FEMDQSQG-DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGE---------EAEDLLTYAWK  545 (650)
Q Consensus       476 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~---------~~~~l~~~~~~  545 (650)
                      ........ ......++..|+|||.+.+..++.++||||||+++|||+||+.|+.....+         ...........
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            65432211 122345677899999999988999999999999999999999886522100         00000000001


Q ss_pred             hccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          546 NWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       546 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ......     ........+.   .+.+++.+||+.||++|||+.||++.|+.
T Consensus       275 ~~~~~~-----~~~~~~~~~~---~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          275 LLKNNG-----RLPRPDGCPD---EIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HHHTTC-----CCCCCTTCCH---HHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HhhcCC-----CCCCCCcccH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            110000     0111122233   45567779999999999999999999875


No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=4.2e-39  Score=329.15  Aligned_cols=250  Identities=26%  Similarity=0.368  Sum_probs=198.7

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch------hHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ++|+..+.||+|+||.||+++.. +++.||||++......      ....+.+|+.++++++||||+++++++.+....+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            56888999999999999999875 5889999998764322      3567899999999999999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC----CeEEeeeec
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM----IPKISDFGM  472 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DFGl  472 (650)
                      +||||+++++|.+++..   ...+++..++.++.||+.||.|||+.+   ++||||||+||+++.++    .+||+|||+
T Consensus        85 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            99999999999999963   457999999999999999999999987   99999999999999887    899999999


Q ss_pred             ccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      +.......   ......||+.|+|||++.+..++.++||||||+++|||++|+.|+.....   .+........ .. . 
T Consensus       159 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~-~~-~-  229 (283)
T 3bhy_A          159 AHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK---QETLTNISAV-NY-D-  229 (283)
T ss_dssp             CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHTT-CC-C-
T ss_pred             ceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch---HHHHHHhHhc-cc-C-
Confidence            98654322   22345689999999999999999999999999999999999999863221   1111111100 00 0 


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                         ..+......+   ..+.+++.+||+.||++|||+.|+++
T Consensus       230 ---~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          230 ---FDEEYFSNTS---ELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             ---CCHHHHTTCC---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---CcchhcccCC---HHHHHHHHHHccCCHhHCcCHHHHHh
Confidence               0000001112   34557788999999999999999986


No 156
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=6.5e-39  Score=329.69  Aligned_cols=254  Identities=25%  Similarity=0.405  Sum_probs=198.4

Q ss_pred             cCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecC
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      +.|.....||+|+||.||+|+. .+++.||||++..........+.+|+.++++++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455567999999999999985 457899999998766555667999999999999999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC-CCCeEEeeeecccccccCCC
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA-DMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DFGla~~~~~~~~  481 (650)
                      ++++|.+++........+++..++.++.||+.||+|||+.+   ++||||||+|||++. ++.+||+|||+++...... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            99999999976444456789999999999999999999987   999999999999987 8999999999998654321 


Q ss_pred             CCccceeecCccccChhccccCC--CCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRGH--FSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                       .......||..|+|||++.+..  ++.++||||||+++|||++|+.|+....... .....  ....       ...+.
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~--~~~~-------~~~~~  246 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-AAMFK--VGMF-------KVHPE  246 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-HHHHH--HHHH-------CCCCC
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-HHHHh--hccc-------ccccc
Confidence             1223457899999999997653  8899999999999999999999985322111 01111  0000       01122


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      +....+.   .+.+++.+||+.||++||++.|+++.
T Consensus       247 ~~~~~~~---~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          247 IPESMSA---EAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             CCTTSCH---HHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             ccccCCH---HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            2222333   34567779999999999999999853


No 157
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2e-39  Score=331.88  Aligned_cols=247  Identities=24%  Similarity=0.321  Sum_probs=196.8

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  397 (650)
                      ..++|+..+.||+|+||.||+++.. +++.||||++....  .....++.+|+..+.++ +||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            3467899999999999999999875 68999999987642  33455788999999999 99999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC--------------
Q 006317          398 IYEFVPNSSVDKFIFDAIK-RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD--------------  462 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--------------  462 (650)
                      ||||+++++|.+++..... ...+++..++.++.||+.||+|||+++   |+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999999999976432 366999999999999999999999987   9999999999999844              


Q ss_pred             -----CCeEEeeeecccccccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCccc
Q 006317          463 -----MIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA  536 (650)
Q Consensus       463 -----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~  536 (650)
                           ..+||+|||++.......      ...||..|+|||.+.+. .++.++||||||+++|||++|..++...     
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----  234 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-----  234 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-----
T ss_pred             ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-----
Confidence                 479999999998654322      23589999999999876 5678999999999999999998765311     


Q ss_pred             chhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          537 EDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       537 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       +..    .....+..     +.+....+.+   +.+++.+||+.||++|||+.|+++.
T Consensus       235 -~~~----~~~~~~~~-----~~~~~~~~~~---~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          235 -DQW----HEIRQGRL-----PRIPQVLSQE---FTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             -HHH----HHHHTTCC-----CCCSSCCCHH---HHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -hHH----HHHHcCCC-----CCCCcccCHH---HHHHHHHHhCCCcccCCCHHHHhhC
Confidence             111    11111111     1222223333   4567779999999999999999753


No 158
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.4e-39  Score=339.34  Aligned_cols=265  Identities=23%  Similarity=0.293  Sum_probs=196.1

Q ss_pred             hhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchh-----HHHHHHHHHHHhhCCCCceeeecceeecCCe
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG-----ELEFKNEVLLVARLQHRNLVRLLGFSFEETE  394 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  394 (650)
                      ...++|...+.||+|+||.||+++.. +|+.||||++.......     ...+.+|+.++++++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999875 48899999997543221     2357899999999999999999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+++ +|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999986 88888764  3456899999999999999999999988   9999999999999999999999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC---
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG---  550 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---  550 (650)
                      .+....  .......||+.|+|||++.+. .++.++||||||+++|||++|..|+....   ..+.+..........   
T Consensus       161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~---~~~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS---DLDQLTRIFETLGTPTEE  235 (346)
T ss_dssp             TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHHHCCCCTT
T ss_pred             eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC---HHHHHHHHHHHcCCCChh
Confidence            664322  223345789999999998764 58999999999999999999998875332   222222222211111   


Q ss_pred             Cccc---ccCc----cCCCCC-----hHHHHHHHHHHhcccccCCCCCCCHHHHHHHh
Q 006317          551 TALN---LIDP----TLRNGS-----SSEIMRCVHIGLLCVQENVANRPTMASVVVML  596 (650)
Q Consensus       551 ~~~~---~id~----~l~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L  596 (650)
                      .+.+   ..+.    ......     ......+.+++.+||+.||++|||+.|+++.-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            0000   0000    000001     11114566788899999999999999999764


No 159
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.4e-39  Score=334.57  Aligned_cols=254  Identities=29%  Similarity=0.437  Sum_probs=198.6

Q ss_pred             ccCCCcCC-cccccCceeEEEeec---cCCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          323 TNNFSTDN-KLGQGGFGAVYKGRL---SHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       323 ~~~f~~~~-~LG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      .++|.+.+ .||+|+||.||+|.+   ..++.||||++.....  .....+.+|+.++++++||||+++++++ ..+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            45677777 999999999999954   2367899999976532  2345789999999999999999999998 567789


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        94 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            99999999999999974   456999999999999999999999987   999999999999999999999999999876


Q ss_pred             ccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          477 EMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       477 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      ...... .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   .........    ...  
T Consensus       168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~----~~~--  238 (291)
T 1xbb_A          168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVTAMLEK----GER--  238 (291)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHHHHHT----TCC--
T ss_pred             ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHc----CCC--
Confidence            433221 11222346788999999998889999999999999999999 9998864322   112211111    110  


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                         +......+.   .+.+++..||+.||++||++.+|++.|+.
T Consensus       239 ---~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          239 ---MGCPAGCPR---EMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             ---CCCCTTCCH---HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ---CCCCCCCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               111122233   35567779999999999999999999975


No 160
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=5.5e-39  Score=345.13  Aligned_cols=251  Identities=21%  Similarity=0.244  Sum_probs=187.6

Q ss_pred             cCCCcC-CcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHh-hCCCCceeeecceeec----CCeeE
Q 006317          324 NNFSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVA-RLQHRNLVRLLGFSFE----ETERL  396 (650)
Q Consensus       324 ~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~----~~~~~  396 (650)
                      ++|... ++||+|+||.||+++.. +++.||||++...     ..+.+|+.++. ..+||||+++++++..    ....+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456555 68999999999999865 5889999998642     35677888874 4589999999998865    56789


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEEeeeecc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKISDFGMA  473 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGla  473 (650)
                      |||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.   ++.+||+|||++
T Consensus       136 lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccc
Confidence            999999999999999742 2346999999999999999999999987   999999999999998   789999999999


Q ss_pred             cccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccc-hhHHHHHHhccCCCc
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAE-DLLTYAWKNWNEGTA  552 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~  552 (650)
                      +.....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .........    ..
T Consensus       212 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~----~~  284 (400)
T 1nxk_A          212 KETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG----QY  284 (400)
T ss_dssp             EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT----CC
T ss_pred             cccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC----cc
Confidence            865422   2234567899999999999999999999999999999999999998654332211 111111110    00


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       ....+. .....   ..+.+++..||+.||++|||+.||++.
T Consensus       285 -~~~~~~-~~~~s---~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 -EFPNPE-WSEVS---EEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             -CCCTTT-TTTSC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -cCCCcc-cccCC---HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             000000 01122   345567789999999999999999975


No 161
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.6e-39  Score=340.31  Aligned_cols=263  Identities=22%  Similarity=0.318  Sum_probs=191.8

Q ss_pred             HhhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch--hHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ....++|+..++||+|+||.||+++. .+++.||||++......  ....+.+|+.++++++||||+++++++.+++..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34557899999999999999999985 46889999999765332  2345779999999999999999999999999999


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe-----CCCCCeEEeeee
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL-----DADMIPKISDFG  471 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-----~~~~~~kl~DFG  471 (650)
                      +||||+++ +|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||     ++++.+||+|||
T Consensus       110 lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          110 LIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             EEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             EEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            99999985 99998863   456999999999999999999999987   9999999999999     455569999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhcc--
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWN--  548 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~--  548 (650)
                      +++......  .......||..|+|||++.+. .++.++|||||||++|||++|+.||......   +.+........  
T Consensus       183 ~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~  257 (329)
T 3gbz_A          183 LARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI---DQLFKIFEVLGLP  257 (329)
T ss_dssp             HHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCC
T ss_pred             CccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH---HHHHHHHHHhCCC
Confidence            998764322  223345789999999999874 5899999999999999999999998643221   11111111110  


Q ss_pred             CCCcc-c--------ccCccCCCCChH------HHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          549 EGTAL-N--------LIDPTLRNGSSS------EIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       549 ~~~~~-~--------~id~~l~~~~~~------~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..... .        ...+........      ....+.+++.+||+.||++|||+.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00000 0        000001111111      1134567888999999999999999985


No 162
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.4e-39  Score=338.17  Aligned_cols=261  Identities=22%  Similarity=0.342  Sum_probs=193.0

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchh-HHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEec
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      ++|...++||+|+||.||+++.. +++.||||++....... ...+.+|+.++++++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            46888999999999999999865 68899999986543221 11355799999999999999999999999999999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      ++ |+|.+++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-  154 (324)
T 3mtl_A           82 LD-KDLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-  154 (324)
T ss_dssp             CS-EEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             cc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-
Confidence            97 588888875  3456999999999999999999999987   9999999999999999999999999997554221 


Q ss_pred             CCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC---CcccccC
Q 006317          482 QGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG---TALNLID  557 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~~~id  557 (650)
                       .......||..|+|||++.+ ..++.++||||||+++|||++|+.||.....   .+.+..........   .+.....
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~  230 (324)
T 3mtl_A          155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV---EEQLHFIFRILGTPTEETWPGILS  230 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCChHhchhhhc
Confidence             22334578999999999876 5689999999999999999999999864332   22222222211110   0100000


Q ss_pred             ---------ccCCCC-----ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 ---------PTLRNG-----SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ---------~~l~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                               +.....     .......+.+++.+||+.||++|||+.|+++-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                     000000     00111345678889999999999999999864


No 163
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=2.8e-39  Score=333.57  Aligned_cols=264  Identities=24%  Similarity=0.367  Sum_probs=186.0

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ..++|...+.||+|+||.||+++.. +++.||||++.... .....++.+|+.++.+++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            4578999999999999999999864 58899999987543 233456889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhh-----ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          400 EFVPNSSVDKFIFDAI-----KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      ||+++++|.+++....     ....+++..++.++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            9999999999987522     2345999999999999999999999987   9999999999999999999999999998


Q ss_pred             ccccCCC---CCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC
Q 006317          475 LFEMDQS---QGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG  550 (650)
Q Consensus       475 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  550 (650)
                      .......   ........||+.|+|||++.+ ..++.++||||||+++|||++|+.|+......   .............
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~  246 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM---KVLMLTLQNDPPS  246 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG---GHHHHHHTSSCCC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh---hHHHHHhccCCCc
Confidence            6543221   112234578999999999876 56899999999999999999999998643221   1111111111111


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ......++.+....+.   .+.+++.+||+.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          247 LETGVQDKEMLKKYGK---SFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TTC-----CCCCCCCH---HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cccccccchhhhhhhH---HHHHHHHHHccCChhhCcCHHHHhh
Confidence            1111112222222333   3456777999999999999999985


No 164
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=6.5e-39  Score=337.06  Aligned_cols=266  Identities=24%  Similarity=0.335  Sum_probs=204.2

Q ss_pred             hhhHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhh--CCCCceeeecceeecCC
Q 006317          316 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEET  393 (650)
Q Consensus       316 ~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~  393 (650)
                      ...-....++|...+.||+|+||.||+|+. +++.||||++...   ....+.+|.+++..  ++||||+++++++....
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            333445567899999999999999999998 5899999999653   33467788888877  79999999999998876


Q ss_pred             ----eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCcEEecCCCCCceEeCC
Q 006317          394 ----ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLH--------EDSRLRIIHRDLKASNILLDA  461 (650)
Q Consensus       394 ----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILl~~  461 (650)
                          ..++||||+++|+|.+++..    ..+++..++.++.||+.||+|||        +.+   |+||||||+||||+.
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKK  182 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECT
T ss_pred             CccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECC
Confidence                78999999999999999863    46899999999999999999999        555   999999999999999


Q ss_pred             CCCeEEeeeecccccccCCCCC--ccceeecCccccChhccccCC------CCccccccchhHHHHHHHhC---------
Q 006317          462 DMIPKISDFGMARLFEMDQSQG--DTSRIVGTFGYMAPEYVTRGH------FSIKSDVFSFGVLVLEIISG---------  524 (650)
Q Consensus       462 ~~~~kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~s~~sDV~S~Gvll~elltG---------  524 (650)
                      ++.+||+|||+++.........  ......||+.|+|||++.+..      ++.++||||||+++|||+||         
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~  262 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  262 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence            9999999999998765432211  223457899999999987752      34789999999999999999         


Q ss_pred             -CCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCC--ChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          525 -QKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNG--SSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       525 -~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       +.|+........ .. ..........    ...+.+...  ..+....+.+++.+||+.||++|||+.||++.|+.
T Consensus       263 ~~~p~~~~~~~~~-~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~  333 (342)
T 1b6c_B          263 YQLPYYDLVPSDP-SV-EEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  333 (342)
T ss_dssp             CCCTTTTTSCSSC-CH-HHHHHHHTTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccCccccCcCcc-cH-HHHHHHHHHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence             556543221111 11 1111111111    111222111  22445567789999999999999999999999975


No 165
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=2.2e-39  Score=338.95  Aligned_cols=261  Identities=22%  Similarity=0.291  Sum_probs=202.1

Q ss_pred             hhhHHhhccCCCcC-CcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCC-CCceeeecceee
Q 006317          316 FSTIRDATNNFSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ-HRNLVRLLGFSF  390 (650)
Q Consensus       316 ~~~~~~~~~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~  390 (650)
                      +.......+.|... ++||+|+||.||+++.. +++.||||++....  ......+.+|+.++.+++ ||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            44455566777777 88999999999999865 58899999987643  233567899999999994 699999999999


Q ss_pred             cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEE
Q 006317          391 EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKI  467 (650)
Q Consensus       391 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl  467 (650)
                      +.+..++||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.   ++.+||
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEE
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEE
Confidence            999999999999999999988532 2457999999999999999999999987   999999999999998   789999


Q ss_pred             eeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          468 SDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       468 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      +|||+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ...........
T Consensus       176 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~  249 (327)
T 3lm5_A          176 VDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN---QETYLNISQVN  249 (327)
T ss_dssp             CCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTC
T ss_pred             eeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHHHhcc
Confidence            9999998664322   22345799999999999999999999999999999999999999864321   11111111110


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       ..     ..........   ..+.+++.+||+.||++|||+.|+++.
T Consensus       250 -~~-----~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          250 -VD-----YSEETFSSVS---QLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             -CC-----CCTTTTTTSC---HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             -cc-----cCchhhcccC---HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence             00     0000111122   335567779999999999999999865


No 166
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=4.8e-39  Score=352.01  Aligned_cols=259  Identities=23%  Similarity=0.264  Sum_probs=193.3

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeecccc--CchhHHHHHHHHHHHhhCCCCceeeecceeecC------
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE------  392 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  392 (650)
                      ..++|+..++||+|+||.||+++.. +++.||||++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            3578999999999999999999854 5889999999764  233445688999999999999999999998654      


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeec
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGM  472 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl  472 (650)
                      ...++||||++++ |.+.+.     ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             CeEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEe
Confidence            4569999999875 555543     34899999999999999999999997   99999999999999999999999999


Q ss_pred             ccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC--
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG--  550 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--  550 (650)
                      ++.....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .+.+..........  
T Consensus       211 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~---~~~~~~i~~~lg~p~~  284 (464)
T 3ttj_A          211 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY---IDQWNKVIEQLGTPCP  284 (464)
T ss_dssp             C-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCSCCH
T ss_pred             eeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCH
Confidence            9865432   223456899999999999999999999999999999999999999864321   11111111110000  


Q ss_pred             -----------------------CcccccCccCCCC-C---hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 -----------------------TALNLIDPTLRNG-S---SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 -----------------------~~~~~id~~l~~~-~---~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                                             .....+...+... .   ......+.+++.+||+.||++|||+.|+++-
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                   0000011111011 0   1113456788899999999999999999864


No 167
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.7e-39  Score=340.13  Aligned_cols=252  Identities=21%  Similarity=0.314  Sum_probs=198.8

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ..++|+..+.||+|+||.||+++.. +|+.||||++.+....    ..+|++++.++ +||||+++++++.++...++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3567999999999999999999865 5889999999765432    34688888887 7999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC----CCeEEeeeecccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD----MIPKISDFGMARL  475 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~~  475 (650)
                      ||+++|+|.+++.   ....+++..+..++.||+.||+|||+.+   |+||||||+|||+.++    +.+||+|||+++.
T Consensus        96 E~~~gg~L~~~i~---~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHH---TCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            9999999999986   3457999999999999999999999987   9999999999998543    3599999999986


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.......    .. . 
T Consensus       170 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~----~~-~-  241 (342)
T 2qr7_A          170 LRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG----KF-S-  241 (342)
T ss_dssp             CBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC----CC-C-
T ss_pred             CcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC----Cc-c-
Confidence            54332  2233457899999999998888899999999999999999999998754333333333222211    10 0 


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      +.........+   .+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~s~---~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          242 LSGGYWNSVSD---TAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCSTTTTTSCH---HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCccccccCCH---HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00111111233   3456777999999999999999985


No 168
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-39  Score=341.07  Aligned_cols=255  Identities=24%  Similarity=0.330  Sum_probs=201.1

Q ss_pred             ccCCCcCCcccccCceeEEEeec----cCCcceeEeeccccCc----hhHHHHHHHHHHHhhC-CCCceeeecceeecCC
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNSV----QGELEFKNEVLLVARL-QHRNLVRLLGFSFEET  393 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  393 (650)
                      .++|+..++||+|+||.||+++.    .+++.||||+++....    .....+.+|+.++.++ +||||+++++++..+.
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36789999999999999999986    3688999999875421    2334567899999999 6999999999999999


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      ..++||||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            99999999999999999974   457999999999999999999999987   999999999999999999999999999


Q ss_pred             cccccCCCCCccceeecCccccChhccccC--CCCccccccchhHHHHHHHhCCCCCCCCCCcccch-hHHHHHHhccCC
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTRG--HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAED-LLTYAWKNWNEG  550 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~  550 (650)
                      +.+..... .......||+.|+|||++.+.  .++.++||||||+++|||++|+.||.......... +.......    
T Consensus       207 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~----  281 (355)
T 1vzo_A          207 KEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS----  281 (355)
T ss_dssp             EECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC----
T ss_pred             eecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc----
Confidence            86543222 123345799999999999863  47899999999999999999999987543322211 11111110    


Q ss_pred             CcccccCccCCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHHhc
Q 006317          551 TALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVMLN  597 (650)
Q Consensus       551 ~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~L~  597 (650)
                            .+.+......   .+.+++.+||+.||++||     ++.|+++..-
T Consensus       282 ------~~~~~~~~~~---~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~  324 (355)
T 1vzo_A          282 ------EPPYPQEMSA---LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF  324 (355)
T ss_dssp             ------CCCCCTTSCH---HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred             ------CCCCCcccCH---HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence                  1111222222   345677799999999999     9999987643


No 169
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4.9e-39  Score=339.57  Aligned_cols=267  Identities=20%  Similarity=0.334  Sum_probs=199.5

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeec--------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFE--------  391 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------  391 (650)
                      .++|+..++||+|+||.||+++. .+|+.||||++.....  .....+.+|+.++++++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            36799999999999999999986 4688999999865432  234467899999999999999999999876        


Q ss_pred             CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          392 ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       392 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                      .+..++||||+++ +|.+.+..  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCC-CHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccch
Confidence            4468999999985 77777654  3356999999999999999999999987   9999999999999999999999999


Q ss_pred             cccccccCCC--CCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhcc
Q 006317          472 MARLFEMDQS--QGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWN  548 (650)
Q Consensus       472 la~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~  548 (650)
                      +++.+.....  ........||+.|+|||++.+ ..++.++||||||+++|||++|+.|+...........+........
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  249 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            9987653222  222344578999999999876 4589999999999999999999999864332221111111111111


Q ss_pred             CCCccc--------ccCccC--CCCChHHH------HHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          549 EGTALN--------LIDPTL--RNGSSSEI------MRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       549 ~~~~~~--------~id~~l--~~~~~~~~------~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......        .+....  .......+      ..+.+++.+||+.||++|||+.|+++-
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            110000        000000  00011111      236678889999999999999999864


No 170
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=5.7e-39  Score=356.27  Aligned_cols=253  Identities=26%  Similarity=0.330  Sum_probs=203.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|+..+.||+|+||.||+++.. +|+.||||++.+..   ......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467889999999999999999865 58999999997642   22345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus       263 mEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             ECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            9999999999998742 2345999999999999999999999987   99999999999999999999999999986643


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccc-hhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAE-DLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .+...... .         .
T Consensus       339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~---------~  405 (576)
T 2acx_A          339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-V---------P  405 (576)
T ss_dssp             TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-C---------C
T ss_pred             Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-c---------c
Confidence            22   233457999999999999989999999999999999999999998754322211 11111111 0         0


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCC-----CHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRP-----TMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~evl~~  595 (650)
                      ..+......   .+.+++.+||+.||++||     ++.||++.
T Consensus       406 ~~~p~~~s~---~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          406 EEYSERFSP---QARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             ccCCccCCH---HHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            111122233   345677799999999999     78888743


No 171
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.3e-39  Score=343.59  Aligned_cols=270  Identities=21%  Similarity=0.245  Sum_probs=198.5

Q ss_pred             cChhhHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCch-----------hHHHHHHHHHHHhhCCCCce
Q 006317          314 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ-----------GELEFKNEVLLVARLQHRNL  382 (650)
Q Consensus       314 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~ni  382 (650)
                      ....++....++|...+.||+|+||.||++...+|+.||||++......           ....+.+|+.++++++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            3456777888999999999999999999999888999999998654221           12578999999999999999


Q ss_pred             eeecceeec-----CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCce
Q 006317          383 VRLLGFSFE-----ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNI  457 (650)
Q Consensus       383 v~l~g~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI  457 (650)
                      +++++++..     ....++||||++ |+|.+++..  ....+++..++.++.||+.||.|||+.+   |+||||||+||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NI  165 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNI  165 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHE
Confidence            999999854     336799999998 588888764  3457999999999999999999999987   99999999999


Q ss_pred             EeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCccc
Q 006317          458 LLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA  536 (650)
Q Consensus       458 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~  536 (650)
                      ||+.++.+||+|||+++.....   .......||..|+|||++.+ ..++.++||||||+++|||++|+.||......  
T Consensus       166 l~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--  240 (362)
T 3pg1_A          166 LLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--  240 (362)
T ss_dssp             EECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred             EEcCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH--
Confidence            9999999999999999754322   22334578999999999887 67899999999999999999999998643211  


Q ss_pred             chhHHHHHHhccCCC-----------cccccCccCCC---C-----ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          537 EDLLTYAWKNWNEGT-----------ALNLIDPTLRN---G-----SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       537 ~~l~~~~~~~~~~~~-----------~~~~id~~l~~---~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       +.............           ..+.+...+..   .     .......+.+++..||+.||++|||+.|+++.
T Consensus       241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             -HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence             11111111111000           00001011100   0     01112345678889999999999999999864


No 172
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.5e-39  Score=331.86  Aligned_cols=249  Identities=27%  Similarity=0.423  Sum_probs=194.5

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecC-CeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE-TERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~e~  401 (650)
                      .++|+..+.||+|+||.||+++. .|+.||||++....  ....+.+|+.++++++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            46788999999999999999987 48899999997643  345789999999999999999999987654 478999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCC
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQS  481 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~  481 (650)
                      +++++|.+++... ....+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||+++.....  
T Consensus        97 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--  170 (278)
T 1byg_A           97 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  170 (278)
T ss_dssp             CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence            9999999999753 2234899999999999999999999987   999999999999999999999999999754322  


Q ss_pred             CCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          482 QGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       482 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                         .....++..|+|||.+.+..++.++||||||+++|||+| |+.|+.....   .+.......    +     ..+..
T Consensus       171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~----~-----~~~~~  235 (278)
T 1byg_A          171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEK----G-----YKMDA  235 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG---GGHHHHHTT----T-----CCCCC
T ss_pred             ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhc----C-----CCCCC
Confidence               123357889999999999999999999999999999999 9988864322   122211111    1     01111


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ....+.   .+.+++..||+.||++||++.|+++.|+.
T Consensus       236 ~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          236 PDGCPP---AVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             CTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cccCCH---HHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence            222333   34567779999999999999999999875


No 173
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2e-39  Score=367.72  Aligned_cols=247  Identities=29%  Similarity=0.435  Sum_probs=193.9

Q ss_pred             CcccccCceeEEEeecc---CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEecCCC
Q 006317          330 NKLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYEFVPN  404 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e~~~~  404 (650)
                      ++||+|+||.||+|.+.   .++.||||+++....  ....++.+|+.++.+++|||||++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999653   367899999976533  335679999999999999999999999864 568899999999


Q ss_pred             CChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCC-C
Q 006317          405 SSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQ-G  483 (650)
Q Consensus       405 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~-~  483 (650)
                      |+|.+++.   ....+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++.+...... .
T Consensus       454 g~L~~~l~---~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          454 GPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             EEHHHHHH---HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             CCHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            99999996   3567999999999999999999999987   999999999999999999999999999876543321 2


Q ss_pred             ccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCC
Q 006317          484 DTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRN  562 (650)
Q Consensus       484 ~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~  562 (650)
                      ......+|..|+|||++.+..++.++|||||||++|||++ |+.||.....   .+.......    +..     .....
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---~~~~~~i~~----~~~-----~~~p~  595 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVTAMLEK----GER-----MGCPA  595 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHHHHHT----TCC-----CCCCT
T ss_pred             cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc----CCC-----CCCCC
Confidence            2233456889999999999999999999999999999999 9999864322   122222111    111     11112


Q ss_pred             CChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          563 GSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       563 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..+.   .+.+|+..||+.||++||++.+|+++|+.
T Consensus       596 ~~~~---~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          596 GCPR---EMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             TCCH---HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCH---HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            2333   45567779999999999999999999864


No 174
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=2e-39  Score=342.80  Aligned_cols=261  Identities=16%  Similarity=0.210  Sum_probs=201.2

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC---------CcceeEeeccccCchhHHHHHHHHHHHhhCCCCceee---------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH---------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR---------  384 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~---------  384 (650)
                      .++|.+.+.||+|+||.||+++...         ++.||||++...     ..+.+|+.++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4689999999999999999998753         789999998754     25788999999999999998         


Q ss_pred             ------ecceeec-CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCce
Q 006317          385 ------LLGFSFE-ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNI  457 (650)
Q Consensus       385 ------l~g~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI  457 (650)
                            +++++.. +...++||||+ +++|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                  5566655 67889999999 99999999753 2467999999999999999999999987   99999999999


Q ss_pred             EeCCCC--CeEEeeeecccccccCCCC-----CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCC
Q 006317          458 LLDADM--IPKISDFGMARLFEMDQSQ-----GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSF  530 (650)
Q Consensus       458 Ll~~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~  530 (650)
                      |++.++  .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            999998  9999999999876533221     122335799999999999999999999999999999999999999874


Q ss_pred             CCCcccchhHHHHHHhccCCCcccccCccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          531 RIGEEAEDLLTYAWKNWNEGTALNLIDPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       531 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                      ..... ..+...... +. .....+.+.... ...+.   .+.+++.+||+.||++||++.+|+++|+..
T Consensus       271 ~~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          271 CLPNT-EDIMKQKQK-FV-DKPGPFVGPCGHWIRPSE---TLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             GTTCH-HHHHHHHHH-HH-HSCCCEECTTSCEECCCH---HHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCcCH-HHHHHHHHh-cc-CChhhhhhhccccCCCcH---HHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            33111 112211111 11 111111111111 01233   455677799999999999999999998753


No 175
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.6e-39  Score=343.88  Aligned_cols=244  Identities=22%  Similarity=0.260  Sum_probs=189.8

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch---hHHHHHHHHHH-HhhCCCCceeeecceeecCCeeEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---GELEFKNEVLL-VARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ++|+..+.||+|+||.||+++.. +++.||||++.+....   ....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            57888999999999999999875 4788999999765432   23346667666 5678999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++|+|.+++..   ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++++||+|||+++....
T Consensus       118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            999999999999873   457899999999999999999999987   99999999999999999999999999985432


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      .  ........||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...+.......   .       .
T Consensus       192 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~~~~~i~~~---~-------~  256 (373)
T 2r5t_A          192 H--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDNILNK---P-------L  256 (373)
T ss_dssp             C--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB---HHHHHHHHHHS---C-------C
T ss_pred             C--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhc---c-------c
Confidence            2  223445689999999999999999999999999999999999999986322   12222211111   0       0


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMAS  591 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~e  591 (650)
                      .+......   .+.+++..||+.||++||++.+
T Consensus       257 ~~~~~~~~---~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          257 QLKPNITN---SARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CCCSSSCH---HHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CCCCCCCH---HHHHHHHHHcccCHHhCCCCCC
Confidence            11122233   3456777999999999999853


No 176
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.5e-39  Score=331.07  Aligned_cols=249  Identities=22%  Similarity=0.328  Sum_probs=202.4

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|...+.||+|+||.||+++.. +++.||+|++....   ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            467889999999999999999875 47789999986542   23445688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||++.....
T Consensus        94 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            999999999998863   457999999999999999999999987   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..  .......||..|+|||.+.+..++.++||||||+++|||++|+.|+......   +......    ...      .
T Consensus       168 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~----~~~------~  232 (294)
T 2rku_A          168 DG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK---ETYLRIK----KNE------Y  232 (294)
T ss_dssp             TT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHH----TTC------C
T ss_pred             Cc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHh----hcc------C
Confidence            22  2233457899999999999989999999999999999999999998643211   1111110    110      1


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       233 ~~~~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          233 SIPKHINP---VAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CCCTTSCH---HHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCccccCH---HHHHHHHHHcccChhhCcCHHHHhhC
Confidence            11122223   34567779999999999999999864


No 177
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=3.5e-39  Score=341.89  Aligned_cols=199  Identities=25%  Similarity=0.381  Sum_probs=175.1

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|+..++||+|+||.||+++.. +++.||+|++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            467999999999999999999865 58899999997653 3334578999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      |+++++|.+++..   ...+++..+..++.||+.||+|||+. +   |+||||||+||||+.++.+||+|||++......
T Consensus       112 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            9999999999974   45699999999999999999999986 6   999999999999999999999999999765322


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCC
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFR  531 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~  531 (650)
                          ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       186 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          186 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             ----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             ----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                123357899999999999999999999999999999999999998643


No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.5e-38  Score=326.57  Aligned_cols=250  Identities=24%  Similarity=0.345  Sum_probs=195.6

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeec----CCeeE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFE----ETERL  396 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  396 (650)
                      ..|...+.||+|+||.||+|... ++..||+|++....  ......+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            45777889999999999999864 57789999987543  3344568999999999999999999998865    35679


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC-CCCCeEEeeeecccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD-ADMIPKISDFGMARL  475 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~~  475 (650)
                      +||||+++++|.+++..   ...+++..++.++.||+.||.|||+.+ .+|+||||||+|||++ +++.+||+|||++..
T Consensus       106 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            99999999999999974   467999999999999999999999874 3599999999999998 789999999999975


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ...    .......||+.|+|||++. +.++.++||||||+++|||++|+.||.....  ......    ....+.....
T Consensus       182 ~~~----~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~----~~~~~~~~~~  250 (290)
T 1t4h_A          182 KRA----SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYR----RVTSGVKPAS  250 (290)
T ss_dssp             CCT----TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHH----HHTTTCCCGG
T ss_pred             ccc----cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHHHH----HHhccCCccc
Confidence            432    2233457899999999886 4689999999999999999999999863221  111111    1111111111


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                          ......   ..+.+++..||+.||++|||+.|+++.
T Consensus       251 ----~~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 ----FDKVAI---PEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ----GGGCCC---HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----cCCCCC---HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                111122   245677889999999999999999853


No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.1e-39  Score=349.34  Aligned_cols=254  Identities=21%  Similarity=0.311  Sum_probs=190.0

Q ss_pred             hhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch--------hHHHHHHHHHHHhhCCCCceeeecceeec
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--------GELEFKNEVLLVARLQHRNLVRLLGFSFE  391 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~  391 (650)
                      ...++|...++||+|+||.||+|... +++.||||++......        ....+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            34678999999999999999999864 5789999998754211        1124789999999999999999999975 


Q ss_pred             CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC---CeEEe
Q 006317          392 ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM---IPKIS  468 (650)
Q Consensus       392 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~  468 (650)
                      .+..++||||+++|+|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++   .+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence            456899999999999999886   4567999999999999999999999987   99999999999997544   59999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhcccc---CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHH
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR---GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWK  545 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~  545 (650)
                      |||+++.....   .......||+.|+|||++.+   ..++.++||||||+++|||++|+.||.......  .+......
T Consensus       285 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i~~  359 (419)
T 3i6u_A          285 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITS  359 (419)
T ss_dssp             CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHHHT
T ss_pred             ecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHHhc
Confidence            99999875422   22344679999999999863   678899999999999999999999986432211  11111111


Q ss_pred             hccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          546 NWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       546 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .    .. .. .+.......   ..+.+++.+||+.||++|||+.|+++.
T Consensus       360 ~----~~-~~-~~~~~~~~~---~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          360 G----KY-NF-IPEVWAEVS---EKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             T----CC-CC-CHHHHTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             C----CC-CC-CchhhcccC---HHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            1    00 00 000001112   345677889999999999999999863


No 180
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.5e-39  Score=330.16  Aligned_cols=259  Identities=24%  Similarity=0.322  Sum_probs=201.4

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceee--cCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSF--EETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~l  397 (650)
                      .++|+..+.||+|+||.||+++.. +++.||+|++....  ......+.+|+.++++++||||+++++++.  .....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            467889999999999999999865 58899999997643  234456899999999999999999999875  3668899


Q ss_pred             EEecCCCCChhHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcC--CCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          398 IYEFVPNSSVDKFIFDAIK-RVQLDWETRYKIIGGIARGILYLHEDS--RLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      ||||+++++|.+++..... ...+++..++.++.||+.||+|||+.+  ..+|+||||||+|||++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            9999999999999976432 345999999999999999999999875  2349999999999999999999999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      ......  .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.....   .++.......    ..  
T Consensus       165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~i~~~----~~--  233 (279)
T 2w5a_A          165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAGKIREG----KF--  233 (279)
T ss_dssp             HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHT----CC--
T ss_pred             eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHHHHhhc----cc--
Confidence            654321  112335689999999999999999999999999999999999999864321   1222211111    11  


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                         +.+....+.   .+.+++.+||+.||++||++.||++.+..
T Consensus       234 ---~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          234 ---RRIPYRYSD---ELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             ---CCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ---ccCCcccCH---HHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence               111122233   34567779999999999999999987654


No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.6e-39  Score=353.24  Aligned_cols=195  Identities=24%  Similarity=0.423  Sum_probs=154.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeecccc--CchhHHHHHHHHHHHhhCCCCceeeecceeecC-----Ce
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE-----TE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  394 (650)
                      .++|++.++||+|+||.||+++.. +++.||||++...  .......+.+|+.++++++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            468999999999999999999864 5889999998654  233445788999999999999999999998543     56


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+ +++|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       132 ~~lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence            89999998 468988886   4567999999999999999999999987   9999999999999999999999999998


Q ss_pred             ccccCCCC-------------------------CccceeecCccccChhcc-ccCCCCccccccchhHHHHHHHhC
Q 006317          475 LFEMDQSQ-------------------------GDTSRIVGTFGYMAPEYV-TRGHFSIKSDVFSFGVLVLEIISG  524 (650)
Q Consensus       475 ~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~sDV~S~Gvll~elltG  524 (650)
                      ........                         ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            76432211                         123345789999999976 556799999999999999999995


No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=4.7e-40  Score=350.99  Aligned_cols=244  Identities=14%  Similarity=0.136  Sum_probs=187.7

Q ss_pred             hhccCCCcCCcccccCceeEEEeec-cCCcceeEeecccc---CchhHHHHHHHH---HHHhhCCCCceeeec-------
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEV---LLVARLQHRNLVRLL-------  386 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------  386 (650)
                      ...++|...+.||+|+||.||+|+. .+|+.||||++...   .......+.+|+   .++++++|||||+++       
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            3457889999999999999999996 45899999999743   233456788999   555666899999998       


Q ss_pred             ceeecCC-----------------eeEEEEecCCCCChhHHHHhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCC
Q 006317          387 GFSFEET-----------------ERLLIYEFVPNSSVDKFIFDAIK----RVQLDWETRYKIIGGIARGILYLHEDSRL  445 (650)
Q Consensus       387 g~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~  445 (650)
                      +++...+                 ..++||||+ +|+|.+++.....    ...+++..++.++.||+.||+|||+++  
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--  226 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--  226 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--
Confidence            4544432                 278999999 6899999975321    122446889999999999999999987  


Q ss_pred             cEEecCCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccC-----------CCCccccccch
Q 006317          446 RIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-----------HFSIKSDVFSF  514 (650)
Q Consensus       446 ~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~sDV~S~  514 (650)
                       |+||||||+||||+.++.+||+|||+++...     .......| +.|+|||++.+.           .++.++|||||
T Consensus       227 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSl  299 (377)
T 3byv_A          227 -LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWAL  299 (377)
T ss_dssp             -EECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred             -eecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHH
Confidence             9999999999999999999999999998532     12334567 999999999887           89999999999


Q ss_pred             hHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          515 GVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       515 Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ||++|||++|+.||........                .+.+.... ...++   .+.+++.+||+.||++|||+.|+++
T Consensus       300 G~il~elltg~~Pf~~~~~~~~----------------~~~~~~~~-~~~~~---~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          300 GLVIYWIWCADLPITKDAALGG----------------SEWIFRSC-KNIPQ---PVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHHHSSCCC------CC----------------SGGGGSSC-CCCCH---HHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHHHCCCCCcccccccc----------------hhhhhhhc-cCCCH---HHHHHHHHHcCCCchhCCCHHHHhh
Confidence            9999999999999853221111                01111111 12233   3456777999999999999999985


No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=2.2e-39  Score=339.42  Aligned_cols=263  Identities=24%  Similarity=0.360  Sum_probs=196.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch--hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ++|+..+.||+|+||.||+++.. +|+.||||++......  ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            57889999999999999999865 4889999998654332  34457899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++......
T Consensus       105 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          105 FVDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             CCSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             cCCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            999999998765   3456999999999999999999999987   9999999999999999999999999998654322


Q ss_pred             CCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHH--------HHHhccCCC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTY--------AWKNWNEGT  551 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~--------~~~~~~~~~  551 (650)
                        .......||..|+|||++.+. .++.++||||||+++|||++|+.||......+.......        .+..+....
T Consensus       179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (331)
T 4aaa_A          179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP  256 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred             --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence              223345689999999999875 789999999999999999999999864332111110000        000000000


Q ss_pred             -cccccCccCCCC-C-----hHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          552 -ALNLIDPTLRNG-S-----SSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       552 -~~~~id~~l~~~-~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                       ......+.+... .     +.....+.+++.+||+.||++|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             000111111111 1     111244667888999999999999999974


No 184
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=6.6e-39  Score=331.59  Aligned_cols=252  Identities=23%  Similarity=0.353  Sum_probs=200.7

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|...+.||+|+||.||+++.. +|+.||||++..........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            3467889999999999999999865 688999999987655455678899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeecccccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARLFE  477 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~~  477 (650)
                      |+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||+   ++++.+||+|||+++...
T Consensus        87 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           87 LVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             cCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            9999999999864   457999999999999999999999987   9999999999999   788999999999987543


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      .    .......||+.|+|||.+.+..++.++||||||+++|||++|+.|+....   ...+.........     . ..
T Consensus       161 ~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~-----~-~~  227 (304)
T 2jam_A          161 N----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET---ESKLFEKIKEGYY-----E-FE  227 (304)
T ss_dssp             C----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC---HHHHHHHHHHCCC-----C-CC
T ss_pred             C----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCCC-----C-CC
Confidence            2    12334568999999999999999999999999999999999999986322   1222222111110     0 01


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .......+   ..+.+++.+||+.||++|||+.|+++-
T Consensus       228 ~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          228 SPFWDDIS---ESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             TTTTTTSC---HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccccCC---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11111222   345567779999999999999999863


No 185
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.8e-39  Score=346.29  Aligned_cols=202  Identities=27%  Similarity=0.437  Sum_probs=162.2

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeecccc--CchhHHHHHHHHHHHhhCC-CCceeeecceeecCC--ee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEET--ER  395 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~  395 (650)
                      ..++|+..++||+|+||.||+++. .+|+.||||++...  .......+.+|+.++.++. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457899999999999999999985 45889999998654  2334456789999999997 999999999997544  68


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.
T Consensus        87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            99999998 588888853    47999999999999999999999987   99999999999999999999999999986


Q ss_pred             cccCC-------------------CCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCC
Q 006317          476 FEMDQ-------------------SQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFR  531 (650)
Q Consensus       476 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~  531 (650)
                      +....                   .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            53211                   1112334579999999999986 67899999999999999999999998643


No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=8.5e-39  Score=335.64  Aligned_cols=249  Identities=23%  Similarity=0.340  Sum_probs=202.6

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|...+.||+|+||.||+++..+ ++.||+|++....   ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            3578889999999999999998654 7789999986542   23445688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       120 ~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          120 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             ECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            999999999998863   457999999999999999999999987   99999999999999999999999999986643


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP  558 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~  558 (650)
                      ..  .......||..|+|||++.+..++.++||||||+++|||++|+.|+......   +........          ..
T Consensus       194 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~----------~~  258 (335)
T 2owb_A          194 DG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK---ETYLRIKKN----------EY  258 (335)
T ss_dssp             TT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHT----------CC
T ss_pred             Cc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH---HHHHHHhcC----------CC
Confidence            22  2233457899999999999999999999999999999999999998643211   111111110          01


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       259 ~~~~~~~~---~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 SIPKHINP---VAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             CCCTTSCH---HHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCccCCH---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11122223   34567779999999999999999864


No 187
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=6.5e-39  Score=330.97  Aligned_cols=253  Identities=24%  Similarity=0.363  Sum_probs=196.2

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|++.+.||+|+||.||+++.. +++.||+|++..........+.+|+.++++++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4568999999999999999999975 488999999987666666789999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++..  ....+++..++.++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||++.......
T Consensus        97 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           97 FCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             CCTTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             eCCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            9999999999875  3456999999999999999999999987   9999999999999999999999999976432111


Q ss_pred             CCCccceeecCccccChhccc-----cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          481 SQGDTSRIVGTFGYMAPEYVT-----RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                        .......||..|+|||++.     ...++.++||||||+++|||++|+.|+.....   ..........   .. ...
T Consensus       172 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~---~~-~~~  242 (302)
T 2j7t_A          172 --QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKS---DP-PTL  242 (302)
T ss_dssp             --HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHHS---CC-CCC
T ss_pred             --cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH---HHHHHHHhcc---CC-ccc
Confidence              1122356899999999984     56789999999999999999999999863221   1111111111   00 000


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .   .....+   ..+.+++.+||+.||++|||+.++++
T Consensus       243 ~---~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          243 L---TPSKWS---VEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             S---SGGGSC---HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             C---CccccC---HHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0   001122   34556777999999999999999874


No 188
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=9.7e-39  Score=326.89  Aligned_cols=245  Identities=23%  Similarity=0.339  Sum_probs=200.2

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|+..+.||+|+||.||+++.. +++.||||++.....   .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            57889999999999999999865 477899999865422   23457889999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||++......
T Consensus        94 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A           94 EFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             EeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            99999999999874   356999999999999999999999987   999999999999999999999999998754322


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCcc
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPT  559 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~  559 (650)
                          ......|+..|+|||.+.+..++.++||||||+++|||++|+.|+......   +.......    .      +..
T Consensus       168 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~----~------~~~  230 (284)
T 2vgo_A          168 ----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT---ETHRRIVN----V------DLK  230 (284)
T ss_dssp             ----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHT----T------CCC
T ss_pred             ----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh---HHHHHHhc----c------ccC
Confidence                223457899999999999999999999999999999999999998643211   11111110    0      111


Q ss_pred             CCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          560 LRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       560 l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      +....+.   .+.+++.+||+.||++||++.++++
T Consensus       231 ~~~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          231 FPPFLSD---GSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             CCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCcCCH---HHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            1222233   3456777999999999999999985


No 189
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.1e-38  Score=327.67  Aligned_cols=252  Identities=21%  Similarity=0.293  Sum_probs=197.0

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC----chhHHHHHHHHHHHhhCCCCceeeecceee--cCCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS----VQGELEFKNEVLLVARLQHRNLVRLLGFSF--EETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~  395 (650)
                      .++|.+.+.||+|+||.||++... +++.||||++....    ......+.+|+.++++++||||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            368999999999999999999864 57899999997643    234457899999999999999999999984  45678


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||++++ |.+++... ....+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999887 77766543 3567999999999999999999999987   99999999999999999999999999987


Q ss_pred             cccCCCCCccceeecCccccChhccccCCC--CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHF--SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ..............||..|+|||++.+...  +.++||||||+++|||++|+.|+....   ..........    ..  
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~i~~----~~--  229 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN---IYKLFENIGK----GS--  229 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHHH----CC--
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHhc----CC--
Confidence            654333333345568999999999876543  789999999999999999999986322   1111111111    10  


Q ss_pred             cccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          554 NLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       554 ~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                          ..+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       230 ----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 ----YAIPGDCGP---PLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ----CCCCSSSCH---HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ----CCCCCccCH---HHHHHHHHHccCChhhCCCHHHHhcC
Confidence                111222333   34467779999999999999999965


No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=3.3e-38  Score=335.15  Aligned_cols=255  Identities=20%  Similarity=0.355  Sum_probs=201.9

Q ss_pred             HHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--------hhHHHHHHHHHHHhhC-CCCceeeecce
Q 006317          319 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARL-QHRNLVRLLGF  388 (650)
Q Consensus       319 ~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~g~  388 (650)
                      .....++|...+.||+|+||.||+++.. +|+.||||++.....        .....+.+|+.++.++ +||||++++++
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            3445578999999999999999999975 689999999865431        1134578899999999 79999999999


Q ss_pred             eecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          389 SFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       389 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                      +......++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEEC
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEE
Confidence            9999999999999999999999874   457999999999999999999999987   9999999999999999999999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhcccc------CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHH
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTY  542 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~  542 (650)
                      |||++.......   ......||+.|+|||++.+      ..++.++||||||+++|||++|+.||....   .......
T Consensus       243 DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~---~~~~~~~  316 (365)
T 2y7j_A          243 DFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR---QILMLRM  316 (365)
T ss_dssp             CCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH
T ss_pred             ecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC---HHHHHHH
Confidence            999998665322   2334679999999999864      357899999999999999999999985321   1112221


Q ss_pred             HHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          543 AWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       543 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .......     ...+.. ...+   ..+.+++.+||+.||++|||+.|+++
T Consensus       317 i~~~~~~-----~~~~~~-~~~~---~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          317 IMEGQYQ-----FSSPEW-DDRS---STVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHTCCC-----CCHHHH-SSSC---HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhCCCC-----CCCccc-ccCC---HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1111000     000000 0111   34557788999999999999999986


No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=7e-39  Score=326.29  Aligned_cols=248  Identities=21%  Similarity=0.354  Sum_probs=193.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|.+.+.||+|+||.||+++.. +|+.||||++.....   .....+.+|+.++++++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            367889999999999999999875 689999999865422   2345788999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   ++|+||||+|||++.++.+||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           90 MEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             EeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            999999999999974   356999999999999999999999998   99999999999999999999999999986543


Q ss_pred             CCCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..   ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.|+....   ...........    .      
T Consensus       164 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~~~~~----~------  227 (276)
T 2h6d_A          164 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH---VPTLFKKIRGG----V------  227 (276)
T ss_dssp             ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHC----C------
T ss_pred             Cc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHhhcC----c------
Confidence            22   2234568999999999988765 689999999999999999999986322   11122111111    0      


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       228 ~~~~~~~~~---~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          228 FYIPEYLNR---SVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCCCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ccCchhcCH---HHHHHHHHHccCChhhCCCHHHHHhC
Confidence            011112223   34567779999999999999999974


No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.3e-38  Score=329.00  Aligned_cols=249  Identities=26%  Similarity=0.390  Sum_probs=203.0

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .+.|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            45688899999999999999985 458899999997653 2345678999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++.    ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.......
T Consensus       101 ~~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          101 YLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CCTTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             eCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            999999999885    357999999999999999999999987   9999999999999999999999999998664322


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                        .......||..|+|||++.+..++.++||||||+++|||++|+.|+.....   ..........         ..+.+
T Consensus       174 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~---------~~~~~  239 (303)
T 3a7i_A          174 --IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP---MKVLFLIPKN---------NPPTL  239 (303)
T ss_dssp             --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHHS---------CCCCC
T ss_pred             --cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH---HHHHHHhhcC---------CCCCC
Confidence              223345789999999999999999999999999999999999999863221   1111111111         01112


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ....+.+   +.+++..||+.||++|||+.|+++.
T Consensus       240 ~~~~~~~---l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          240 EGNYSKP---LKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CSSCCHH---HHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ccccCHH---HHHHHHHHcCCChhhCcCHHHHhhC
Confidence            2223333   4567779999999999999999854


No 193
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=6.5e-39  Score=329.01  Aligned_cols=257  Identities=28%  Similarity=0.393  Sum_probs=193.6

Q ss_pred             ccCCCcCCcccccCceeEEEeecc--CCc--ceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS--HGQ--EIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETER  395 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~--~g~--~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  395 (650)
                      .++|+..+.||+|+||.||+|++.  +++  .||||+++...   ......+.+|+.++++++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            467899999999999999999853  233  58999987642   234457899999999999999999999988765 8


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++++|.+++...  ...+++..++.++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||+++.
T Consensus        96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccc
Confidence            8999999999999999753  456999999999999999999999987   99999999999999999999999999987


Q ss_pred             cccCCCC-CccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          476 FEMDQSQ-GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       476 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ....... .......+|..|+|||++.+..++.++||||||+++|||++ |+.||.....   .........   ...  
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~---~~~--  242 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---SQILHKIDK---EGE--  242 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHHT---SCC--
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---HHHHHHHHc---cCC--
Confidence            6433221 12233467889999999998889999999999999999999 9998863321   122211111   110  


Q ss_pred             cccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCC
Q 006317          554 NLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSS  599 (650)
Q Consensus       554 ~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~  599 (650)
                         ........+   ..+.+++.+||+.||++|||+.++++.|+..
T Consensus       243 ---~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          243 ---RLPRPEDCP---QDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             ---CCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CCCCCcCcC---HHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence               011111223   3455677799999999999999999999764


No 194
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.9e-39  Score=337.96  Aligned_cols=254  Identities=28%  Similarity=0.436  Sum_probs=198.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcc--eeEeeccccC-chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQE--IAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~--vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ++|+..+.||+|+||.||+++.. ++..  +|||++.... ......+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            57889999999999999999865 3554  4999987542 23344688999999999 899999999999999999999


Q ss_pred             EecCCCCChhHHHHhhh-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCe
Q 006317          399 YEFVPNSSVDKFIFDAI-------------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIP  465 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~  465 (650)
                      |||+++|+|.+++....             ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999997531             2347999999999999999999999987   9999999999999999999


Q ss_pred             EEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHH
Q 006317          466 KISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       466 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~  544 (650)
                      ||+|||+++.....   .......++..|+|||++.+..++.++||||||+++|||+| |+.||.....   .++..   
T Consensus       182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~~~---  252 (327)
T 1fvr_A          182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYE---  252 (327)
T ss_dssp             EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHH---
T ss_pred             EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH---HHHHH---
Confidence            99999999743221   12223456889999999998889999999999999999998 9998853221   11111   


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                       ....+.     ........+   ..+.+++.+||+.||++|||+.|+++.|+.
T Consensus       253 -~~~~~~-----~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          253 -KLPQGY-----RLEKPLNCD---DEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             -HGGGTC-----CCCCCTTBC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HhhcCC-----CCCCCCCCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             111110     011111222   345567779999999999999999998875


No 195
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.4e-38  Score=346.97  Aligned_cols=260  Identities=18%  Similarity=0.258  Sum_probs=202.6

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCC-ceeeecceeecCCeeEEEEe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR-NLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~e  400 (650)
                      .++|++.++||+|+||.||+|+. .+++.||||++......  .++.+|++++..++|+ ++..+..++.+.+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46899999999999999999985 56889999987654332  2478899999999875 55555566677888899999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeecccccc
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMARLFE  477 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~~  477 (650)
                      |+ +++|.+++..  ....+++..++.|+.||+.||+|||+++   |+||||||+||||   +.++.+||+|||+++.+.
T Consensus        84 ~~-g~sL~~ll~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 9999999874  2457999999999999999999999987   9999999999999   688999999999998765


Q ss_pred             cCCCC-----CccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          478 MDQSQ-----GDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       478 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      .....     .......||..|+|||++.+..++.++||||||++||||++|+.||...........+............
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            43322     1223567999999999999999999999999999999999999999754433332222222111100000


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      ..     +....+.   ++.+++..||+.+|++||++.+|+++|+.
T Consensus       238 ~~-----l~~~~p~---~l~~li~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          238 EA-----LCRGYPT---EFASYFHYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             HH-----HHTTSCH---HHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             HH-----HhcCCcH---HHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            00     0111223   45567779999999999999999988753


No 196
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.4e-38  Score=345.80  Aligned_cols=200  Identities=25%  Similarity=0.435  Sum_probs=167.0

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeecccc--CchhHHHHHHHHHHHhhCCCCceeeecceeecC-----C
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE-----T  393 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~  393 (650)
                      ..++|.+.+.||+|+||.||+++.. +++.||||++...  .......+.+|+.++++++||||+++++++...     .
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            3578999999999999999999864 5788999999754  233445788999999999999999999998766     5


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      ..++||||+. ++|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       104 ~~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFK---TPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecCC-cCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence            7899999986 59999886   3466999999999999999999999997   999999999999999999999999999


Q ss_pred             cccccCCCC--------------------CccceeecCccccChhcc-ccCCCCccccccchhHHHHHHHhCCCCC
Q 006317          474 RLFEMDQSQ--------------------GDTSRIVGTFGYMAPEYV-TRGHFSIKSDVFSFGVLVLEIISGQKNN  528 (650)
Q Consensus       474 ~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~sDV~S~Gvll~elltG~~p~  528 (650)
                      +........                    .......||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            876533211                    123456899999999986 5567999999999999999999865554


No 197
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.2e-38  Score=326.85  Aligned_cols=252  Identities=27%  Similarity=0.367  Sum_probs=184.8

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch-h-HHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ-G-ELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..+.||+|+||.||+++. .+|+.||||++...... . ...+.++...++.++||||+++++++.+++..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            457899999999999999999986 46889999999765322 2 22344555668889999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          399 YEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      |||++ |+|.+++.... ....+++..++.++.||+.||+|||++ +   |+||||||+|||++.++.+||+|||+++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99997 58888876532 346799999999999999999999997 7   999999999999999999999999999865


Q ss_pred             ccCCCCCccceeecCccccChhcc----ccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYV----TRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ....   ......||+.|+|||++    .+..++.++||||||+++|||++|+.|+.....  ....+.....   ... 
T Consensus       161 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~---~~~-  231 (290)
T 3fme_A          161 VDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQLKQVVE---EPS-  231 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHHHHHHH---SCC-
T ss_pred             cccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc--hHHHHHHHhc---cCC-
Confidence            4322   22334689999999996    556789999999999999999999999863211  1111111111   100 


Q ss_pred             ccccCccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                           +... ...+.   .+.+++.+||+.||++|||+.|+++
T Consensus       232 -----~~~~~~~~~~---~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 -----PQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             -----CCCCTTTSCH---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -----CCcccccCCH---HHHHHHHHHhhcChhhCcCHHHHHh
Confidence                 1111 11223   3556777999999999999999974


No 198
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=4.4e-39  Score=334.93  Aligned_cols=270  Identities=25%  Similarity=0.377  Sum_probs=198.6

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCee
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETER  395 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  395 (650)
                      +.....++|+..+.||+|+||.||+|+..  ..+|+|++.....  .....+.+|+.++++++||||+++++++.+.+..
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  104 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL  104 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence            33344578999999999999999999874  3699999875432  2233577899999999999999999999999999


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      ++||||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   ++||||||+|||++ ++.+||+|||+++.
T Consensus       105 ~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          105 AIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             EEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             EEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccc
Confidence            999999999999999864  3446999999999999999999999987   99999999999998 67999999999876


Q ss_pred             cccCC---CCCccceeecCccccChhcccc---------CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHH
Q 006317          476 FEMDQ---SQGDTSRIVGTFGYMAPEYVTR---------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYA  543 (650)
Q Consensus       476 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~  543 (650)
                      .....   .........||..|+|||++.+         ..++.++||||||+++|||++|+.|+.....   .......
T Consensus       179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~  255 (319)
T 2y4i_B          179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA---EAIIWQM  255 (319)
T ss_dssp             ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH---HHHHHHH
T ss_pred             cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHh
Confidence            53221   1122334568999999999874         4578999999999999999999999863221   1111111


Q ss_pred             HHhccCCCcccccCccCCC-CChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcCCCCCCCCCCCCc
Q 006317          544 WKNWNEGTALNLIDPTLRN-GSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNSSSLSLPLPSQPA  610 (650)
Q Consensus       544 ~~~~~~~~~~~~id~~l~~-~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~~~~~~~~p~~p~  610 (650)
                      ..    +.     .+.+.. ..+.   .+.+++..||+.||++|||+.+|+++|+.........+.|.
T Consensus       256 ~~----~~-----~~~~~~~~~~~---~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~  311 (319)
T 2y4i_B          256 GT----GM-----KPNLSQIGMGK---EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPG  311 (319)
T ss_dssp             HT----TC-----CCCCCCSSCCT---THHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----------
T ss_pred             cc----CC-----CCCCCcCCCCH---HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCc
Confidence            11    11     111111 1222   34567779999999999999999999998655444444443


No 199
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-38  Score=332.06  Aligned_cols=260  Identities=29%  Similarity=0.444  Sum_probs=198.3

Q ss_pred             ccChhhHHhhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceee
Q 006317          313 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  390 (650)
Q Consensus       313 ~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  390 (650)
                      .+++..+....++|+..+.||+|+||.||+|+. .+++.||||++..... ....+.+|+.+++++ +||||+++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            355667777889999999999999999999986 4688999999875432 345788999999999 8999999999997


Q ss_pred             c------CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC
Q 006317          391 E------ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI  464 (650)
Q Consensus       391 ~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~  464 (650)
                      .      ....++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCC
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCC
Confidence            6      46789999999999999999753 3457999999999999999999999987   999999999999999999


Q ss_pred             eEEeeeecccccccCCCCCccceeecCccccChhccc-----cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchh
Q 006317          465 PKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVT-----RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDL  539 (650)
Q Consensus       465 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l  539 (650)
                      +||+|||++.......  .......||..|+|||++.     +..++.++||||||+++|||++|+.|+.....   ...
T Consensus       168 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~  242 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---MRA  242 (326)
T ss_dssp             EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH---HHH
T ss_pred             EEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHH
Confidence            9999999997654221  1233457899999999987     56789999999999999999999999853221   111


Q ss_pred             HHHHHHhccCCCcccccCccC-CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          540 LTYAWKNWNEGTALNLIDPTL-RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       540 ~~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .......    .     .+.+ ....+.   .+.+++.+||+.||++||++.++++
T Consensus       243 ~~~~~~~----~-----~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          243 LFLIPRN----P-----APRLKSKKWSK---KFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHS----C-----CCCCSCSCSCH---HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhhcC----c-----cccCCccccCH---HHHHHHHHHhccChhhCCCHHHHhh
Confidence            1111110    0     0111 111233   3456777999999999999999986


No 200
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.8e-38  Score=349.78  Aligned_cols=254  Identities=25%  Similarity=0.331  Sum_probs=203.1

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .++|...+.||+|+||.||+++.. +|+.||||++.+...   .....+.+|+.++++++||||+++++++......++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            467888999999999999999875 589999999976432   2345688999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          399 YEFVPNSSVDKFIFDAIK-RVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      |||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999999875322 446999999999999999999999987   9999999999999999999999999998764


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc-chhHHHHHHhccCCCccccc
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA-EDLLTYAWKNWNEGTALNLI  556 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~i  556 (650)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.......    .     
T Consensus       341 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~----~-----  409 (543)
T 3c4z_A          341 AGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ----A-----  409 (543)
T ss_dssp             TTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC----C-----
T ss_pred             CCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc----c-----
Confidence            332  223345899999999999999999999999999999999999999874432211 1122111110    0     


Q ss_pred             CccCCCCChHHHHHHHHHHhcccccCCCCCCCH-----HHHHH
Q 006317          557 DPTLRNGSSSEIMRCVHIGLLCVQENVANRPTM-----ASVVV  594 (650)
Q Consensus       557 d~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~-----~evl~  594 (650)
                       ..+....+.   .+.+++..||+.||++||++     .+|++
T Consensus       410 -~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          410 -VTYPDKFSP---ASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -CCCCTTSCH---HHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -cCCCcccCH---HHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence             111122233   34466779999999999975     56663


No 201
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2e-38  Score=331.71  Aligned_cols=256  Identities=17%  Similarity=0.254  Sum_probs=196.4

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCceeeecceeec--CCeeEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFE--ETERLLI  398 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lv  398 (650)
                      .++|+..++||+|+||.||+++. .+++.||||+++...   ...+.+|+.++++++ ||||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            36789999999999999999985 568899999997543   356889999999997 9999999999987  6678999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC-CeEEeeeecccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM-IPKISDFGMARLFE  477 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DFGla~~~~  477 (650)
                      |||+++++|.+++.      .+++..++.++.||+.||+|||+.+   |+||||||+||||+.++ .+||+|||+++...
T Consensus       112 ~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             EECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            99999999998874      3899999999999999999999987   99999999999999777 89999999998665


Q ss_pred             cCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCC-----
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGT-----  551 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-----  551 (650)
                      ...   ......||..|+|||++.+ ..++.++||||||+++|||++|+.|+......  .+.+...........     
T Consensus       183 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~  257 (330)
T 3nsz_A          183 PGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYI  257 (330)
T ss_dssp             TTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHH
T ss_pred             CCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHH
Confidence            332   2334578999999999887 67899999999999999999999998532221  111111000000000     


Q ss_pred             ------------------cccccCccCCCC-ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          552 ------------------ALNLIDPTLRNG-SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       552 ------------------~~~~id~~l~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                                        ............ .......+.+++.+||+.||++|||++|+++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                              000000001111 01112455678889999999999999999853


No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=2.6e-38  Score=326.02  Aligned_cols=262  Identities=22%  Similarity=0.353  Sum_probs=198.3

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ++|+..+.||+|+||.||+++.. +|+.||||++.....  .....+.+|+.++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57888999999999999999865 588999999875432  223568899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+. ++|.+++... ....+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||++.......
T Consensus        83 ~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  157 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  157 (299)
T ss_dssp             CCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence            998 6999988753 2356899999999999999999999987   9999999999999999999999999998664322


Q ss_pred             CCCccceeecCccccChhccccCC-CCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC--C------
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGH-FSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG--T------  551 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--~------  551 (650)
                        .......||..|+|||.+.+.. ++.++||||||+++|||++|+.||.....   .+.+..........  .      
T Consensus       158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
T 2r3i_A          158 --RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE---IDQLFRIFRTLGTPDEVVWPGVT  232 (299)
T ss_dssp             --BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             --cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHHHhCCCchhhhhHhh
Confidence              1223356899999999998765 79999999999999999999999864322   11111111111100  0      


Q ss_pred             cccccCccCCCC---C-----hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          552 ALNLIDPTLRNG---S-----SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       552 ~~~~id~~l~~~---~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......+.+...   .     ......+.+++.+||+.||++|||+.|+++-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h  284 (299)
T 2r3i_A          233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  284 (299)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            000011111110   0     0011345677889999999999999999863


No 203
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-38  Score=336.44  Aligned_cols=257  Identities=23%  Similarity=0.290  Sum_probs=191.8

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCC------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEET------  393 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  393 (650)
                      .++|+..+.||+|+||.||+|+. .+|+.||||++....  ......+.+|+.++++++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46789999999999999999986 458999999996542  233456889999999999999999999987653      


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      ..++||||+ +++|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            469999999 8899998863    46999999999999999999999987   999999999999999999999999999


Q ss_pred             cccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC--
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG--  550 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--  550 (650)
                      +.....     .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.....   .+.+..........  
T Consensus       176 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~l~~i~~~~g~~~~  247 (367)
T 1cm8_A          176 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH---LDQLKEIMKVTGTPPA  247 (367)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCH
T ss_pred             cccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCH
Confidence            865422     234578999999999887 6899999999999999999999999864322   11111111110000  


Q ss_pred             ---------Ccccc-------cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 ---------TALNL-------IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ---------~~~~~-------id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                               .....       -...+..........+.+++.+||+.||++|||+.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                     00000       0000000011112345677789999999999999999975


No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=4.8e-38  Score=326.45  Aligned_cols=251  Identities=24%  Similarity=0.358  Sum_probs=196.6

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEEe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~e  400 (650)
                      ..++|+..+.||+|+||.||+|+.. +|+.||||++....  ....+.+|+.++.+++||||+++++++...+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567999999999999999999865 48899999997643  33468899999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCC
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQ  480 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~  480 (650)
                      |+++++|.+++..  ....+++..++.++.||+.||.|||+.+   ++|+||||+|||++.++.+||+|||++.......
T Consensus       105 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          105 YCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             CCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            9999999999864  3567999999999999999999999987   9999999999999999999999999998654322


Q ss_pred             CCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC
Q 006317          481 SQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL  560 (650)
Q Consensus       481 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l  560 (650)
                        .......||..|+|||.+.+..++.++||||||+++|||++|+.|+......   .........   . ......   
T Consensus       180 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~---~-~~~~~~---  247 (314)
T 3com_A          180 --AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM---RAIFMIPTN---P-PPTFRK---  247 (314)
T ss_dssp             --SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHHS---C-CCCCSS---
T ss_pred             --cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHhcC---C-CcccCC---
Confidence              2233457899999999999999999999999999999999999998632211   111111010   0 000000   


Q ss_pred             CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          561 RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       561 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ....+   ..+.+++.+||+.||++|||+.++++
T Consensus       248 ~~~~~---~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 PELWS---DNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGGSC---HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            00112   34556777999999999999999975


No 205
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.2e-38  Score=352.24  Aligned_cols=251  Identities=25%  Similarity=0.389  Sum_probs=196.1

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..++||+|+||.||+++.. ++..||||++....  ......+.+|+.++++++||||+++++++.+....++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3457899999999999999999865 58889999997653  23345789999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC---CCeEEeeeecccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD---MIPKISDFGMARL  475 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~DFGla~~  475 (650)
                      |||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.+   +.+||+|||+++.
T Consensus       115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            999999999998863   467999999999999999999999987   9999999999999764   4599999999987


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      +....   ......||+.|+|||++. +.++.++|||||||++|||++|+.||.....   .+++........     ..
T Consensus       189 ~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~~-----~~  256 (494)
T 3lij_A          189 FENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD---QEILRKVEKGKY-----TF  256 (494)
T ss_dssp             CBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCC-----CC
T ss_pred             CCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCC-----CC
Confidence            65322   233457999999999886 5689999999999999999999999864322   222222211100     00


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..+.. ...+.   .+.+++.+||+.||++|||+.|+++
T Consensus       257 ~~~~~-~~~s~---~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          257 DSPEW-KNVSE---GAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CSGGG-TTSCH---HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             Cchhc-ccCCH---HHHHHHHHHCCCChhhCccHHHHhc
Confidence            00111 11222   3456777999999999999999984


No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.8e-38  Score=350.26  Aligned_cols=252  Identities=27%  Similarity=0.350  Sum_probs=199.6

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|++.++||+|+||.||+++.. +++.||||++....  ......+.+|+.++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            4567999999999999999999865 68899999986532  23455789999999999999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC---CCCCeEEeeeecccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD---ADMIPKISDFGMARL  475 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~DFGla~~  475 (650)
                      |||+++|+|.+++..   ...+++..++.++.||+.||.|||+.+   |+||||||+|||++   .++.+||+|||+++.
T Consensus       100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            999999999998864   457999999999999999999999987   99999999999995   456799999999986


Q ss_pred             cccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      +....   ......||+.|+|||++.+ .++.++|||||||++|||++|+.||....   ..+.+.........   .. 
T Consensus       174 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~---~~-  242 (486)
T 3mwu_A          174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDILKRVETGKYA---FD-  242 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTCCC---SC-
T ss_pred             CCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC---CC-
Confidence            64322   2334579999999999875 59999999999999999999999986322   22222222111000   00 


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       .+.. ...+   ..+.+++..||+.||++|||+.|+++.
T Consensus       243 -~~~~-~~~s---~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          243 -LPQW-RTIS---DDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -SGGG-GGSC---HHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -Cccc-CCCC---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             0000 0112   345567779999999999999999974


No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=6.6e-38  Score=347.29  Aligned_cols=252  Identities=27%  Similarity=0.360  Sum_probs=198.2

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-------------hhHHHHHHHHHHHhhCCCCceeeecc
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-------------QGELEFKNEVLLVARLQHRNLVRLLG  387 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g  387 (650)
                      ..++|...++||+|+||.||+++.. +++.||||++.....             .....+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            4578999999999999999999865 478899999876432             22456889999999999999999999


Q ss_pred             eeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC---C
Q 006317          388 FSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM---I  464 (650)
Q Consensus       388 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~  464 (650)
                      ++.+....++||||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            99999999999999999999998864   457999999999999999999999987   99999999999999876   6


Q ss_pred             eEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          465 PKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       465 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      +||+|||+++.+....   ......||+.|+|||++. +.++.++|||||||++|||++|+.||.....   .+++....
T Consensus       188 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~  260 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND---QDIIKKVE  260 (504)
T ss_dssp             EEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH
T ss_pred             EEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH
Confidence            9999999998765332   233457999999999987 5689999999999999999999999864322   22222221


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..    ...  .+.......+   ..+.+++.+||+.||.+|||+.|+++.
T Consensus       261 ~~----~~~--~~~~~~~~~s---~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          261 KG----KYY--FDFNDWKNIS---DEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HC----CCC--CCHHHHTTSC---HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cC----CCC--CCccccCCCC---HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11    000  0000001112   345567779999999999999999853


No 208
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=9.9e-39  Score=352.21  Aligned_cols=252  Identities=27%  Similarity=0.353  Sum_probs=202.1

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ..++|+..++||+|+||.||+++.. +|+.||||++....   ......+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            3467899999999999999999865 68899999986543   2345678999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---CCCCCeEEeeeeccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---DADMIPKISDFGMAR  474 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~  474 (650)
                      ||||+.+|+|.+++.   ....+++..++.++.||+.||+|||+++   |+||||||+|||+   +.++.+||+|||+++
T Consensus       104 v~e~~~~~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          104 VGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             EECCCCSCBHHHHHH---TCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EEecCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            999999999999886   4567999999999999999999999987   9999999999999   567899999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      .+....   ......||+.|+|||++.+ .++.++|||||||++|||++|+.||....   ..+.+.........   ..
T Consensus       178 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~---~~  247 (484)
T 3nyv_A          178 HFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVEKGKYT---FE  247 (484)
T ss_dssp             HBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHCCCC---CC
T ss_pred             Eccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCCCC---CC
Confidence            765322   2334579999999999875 68999999999999999999999986332   22222222111000   00


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                        .+.. ...+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       248 --~~~~-~~~s---~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          248 --LPQW-KKVS---ESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             --SGGG-GGSC---HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --Cccc-ccCC---HHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence              0000 0112   345567779999999999999999853


No 209
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.1e-38  Score=329.16  Aligned_cols=261  Identities=20%  Similarity=0.322  Sum_probs=196.9

Q ss_pred             cChhhHHhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccC--chhHHHHHHHHHHHhhCC--CCceeeeccee
Q 006317          314 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ--HRNLVRLLGFS  389 (650)
Q Consensus       314 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~  389 (650)
                      +.+..+....++|++.+.||+|+||.||+++..+++.||||++....  ......+.+|+.++.+++  ||||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            33444455667899999999999999999998889999999996543  334457899999999997  59999999999


Q ss_pred             ecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEee
Q 006317          390 FEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISD  469 (650)
Q Consensus       390 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D  469 (650)
                      ...+..++||| +.+++|.+++..   ...+++..++.++.||+.||.|||+.+   |+||||||+|||+++ +.+||+|
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~D  169 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLID  169 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECC
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEee
Confidence            99999999999 678899999873   457999999999999999999999987   999999999999964 8999999


Q ss_pred             eecccccccCCCCCccceeecCccccChhcccc-----------CCCCccccccchhHHHHHHHhCCCCCCCCCCcccch
Q 006317          470 FGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR-----------GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAED  538 (650)
Q Consensus       470 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~  538 (650)
                      ||+++...............||+.|+|||.+.+           ..++.++||||||+++|||++|+.|+......    
T Consensus       170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----  245 (313)
T 3cek_A          170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----  245 (313)
T ss_dssp             CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----
T ss_pred             ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH----
Confidence            999987654333323344578999999999875           47889999999999999999999998532211    


Q ss_pred             hHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          539 LLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       539 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                       ............     ...+....+.   .+.+++.+||+.||++||++.|+++.
T Consensus       246 -~~~~~~~~~~~~-----~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          246 -ISKLHAIIDPNH-----EIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -HHHHHHHHCTTS-----CCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -HHHHHHHHhccc-----ccCCcccchH---HHHHHHHHHccCCcccCcCHHHHhcC
Confidence             111111111110     0111112223   45567779999999999999999854


No 210
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.4e-38  Score=332.75  Aligned_cols=252  Identities=27%  Similarity=0.368  Sum_probs=195.5

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCc-hhHHHHHHHHHH-HhhCCCCceeeecceeecCCeeEEE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV-QGELEFKNEVLL-VARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..++|+..+.||+|+||.||+++. .+|+.||||++..... ....++..|..+ ++.++||||+++++++.+++..++|
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv  128 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC  128 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred             ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence            446788899999999999999985 4689999999976532 333455556555 7788999999999999999999999


Q ss_pred             EecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          399 YEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      |||+++ +|.+++.... ....+++..++.++.||+.||+|||++ +   |+||||||+||||+.++.+||+|||+++..
T Consensus       129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  204 (340)
T 3an0_A          129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL  204 (340)
T ss_dssp             ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred             HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            999975 9999887532 356799999999999999999999987 6   999999999999999999999999999865


Q ss_pred             ccCCCCCccceeecCccccChhccc----cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVT----RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ...   .......||+.|+|||++.    ...++.++||||||+++|||++|+.|+.....  ....+.....   ..  
T Consensus       205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~---~~--  274 (340)
T 3an0_A          205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQLKQVVE---EP--  274 (340)
T ss_dssp             SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHHHHHHH---SC--
T ss_pred             ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc--hHHHHHHHhc---CC--
Confidence            421   1122346899999999964    34789999999999999999999999863221  1111111111   10  


Q ss_pred             ccccCccCC-CCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLR-NGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~-~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                          .+.+. ...+   ..+.+++.+||+.||++|||+.||++
T Consensus       275 ----~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          275 ----SPQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             ----CCCCCGGGSC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ----CCCCCcccCC---HHHHHHHHHHccCCcccCcCHHHHhc
Confidence                01111 0112   34567778999999999999999975


No 211
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=3.3e-38  Score=338.42  Aligned_cols=261  Identities=22%  Similarity=0.254  Sum_probs=199.2

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCC--------CCceeeecceee---
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ--------HRNLVRLLGFSF---  390 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~---  390 (650)
                      .++|.+.++||+|+||.||+++. .+++.||||++.... .....+.+|+.++++++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47899999999999999999985 458899999997542 33456889999999985        788999999987   


Q ss_pred             -cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCC-----
Q 006317          391 -EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADM-----  463 (650)
Q Consensus       391 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~-----  463 (650)
                       .....++||||+ +++|.+++... ....+++..++.++.||+.||+|||++ +   |+||||||+||||+.++     
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence             556789999999 55666666532 335699999999999999999999998 6   99999999999999775     


Q ss_pred             --------------------------------------------CeEEeeeecccccccCCCCCccceeecCccccChhc
Q 006317          464 --------------------------------------------IPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEY  499 (650)
Q Consensus       464 --------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~  499 (650)
                                                                  .+||+|||+++.....     .....||..|+|||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence                                                        8999999999865432     233578999999999


Q ss_pred             cccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccc---hhHHHHHHhccC------------------CCcccccCc
Q 006317          500 VTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAE---DLLTYAWKNWNE------------------GTALNLIDP  558 (650)
Q Consensus       500 ~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~---~l~~~~~~~~~~------------------~~~~~~id~  558 (650)
                      +.+..++.++|||||||++|||++|+.||.........   +.+.........                  ......+..
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  344 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK  344 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence            99999999999999999999999999999754433221   111111111000                  000000000


Q ss_pred             cC-----------CCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          559 TL-----------RNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       559 ~l-----------~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..           ..........+.+++.+||+.||++|||+.|+++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            00           0113444567789999999999999999999985


No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=3.8e-38  Score=324.58  Aligned_cols=252  Identities=22%  Similarity=0.296  Sum_probs=200.0

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---------hhHHHHHHHHHHHhhCC-CCceeeecceee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---------QGELEFKNEVLLVARLQ-HRNLVRLLGFSF  390 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~g~~~  390 (650)
                      ..++|+..+.||+|+||.||+++.. +|+.||||++.....         .....+.+|+.+++++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            4578999999999999999999865 588999999865431         12345789999999996 999999999999


Q ss_pred             cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeee
Q 006317          391 EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDF  470 (650)
Q Consensus       391 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF  470 (650)
                      .....++||||+++++|.+++..   ...+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence            99999999999999999999974   457999999999999999999999987   999999999999999999999999


Q ss_pred             ecccccccCCCCCccceeecCccccChhccc------cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          471 GMARLFEMDQSQGDTSRIVGTFGYMAPEYVT------RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       471 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      |++.......   ......||..|+|||++.      ...++.++||||||+++|||++|+.|+.....   ........
T Consensus       169 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~  242 (298)
T 1phk_A          169 GFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLRMIM  242 (298)
T ss_dssp             TTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH
T ss_pred             cchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH---HHHHHHHh
Confidence            9998654322   233457899999999985      45688999999999999999999999853221   11111111


Q ss_pred             HhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          545 KNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       545 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      ..    .. ....+    ........+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~----~~-~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          243 SG----NY-QFGSP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HT----CC-CCCTT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cC----Cc-ccCcc----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            11    00 00000    00111234567788999999999999999975


No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=6.3e-39  Score=341.48  Aligned_cols=251  Identities=10%  Similarity=0.059  Sum_probs=178.2

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc---hhHHHHHHHHHHHhhC--CCCceeeec-------ce
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARL--QHRNLVRLL-------GF  388 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------g~  388 (650)
                      ....|...++||+|+||.||+|+.. +|+.||||++.....   .....+.+|+.++..+  +||||++++       ++
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            3456889999999999999999864 688999999987543   2334577785544444  699988755       33


Q ss_pred             eecC-----------------CeeEEEEecCCCCChhHHHHhhhccCCCCHHHH------HHHHHHHHHHHHHhhhcCCC
Q 006317          389 SFEE-----------------TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETR------YKIIGGIARGILYLHEDSRL  445 (650)
Q Consensus       389 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~  445 (650)
                      +...                 ...++||||++ |+|.+++...  ...+.+..+      +.++.||+.||+|||+++  
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--  214 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKG--  214 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--
Confidence            3322                 33799999999 8999999863  234566666      788899999999999987  


Q ss_pred             cEEecCCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhcccc--CCCCccccccchhHHHHHHHh
Q 006317          446 RIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR--GHFSIKSDVFSFGVLVLEIIS  523 (650)
Q Consensus       446 ~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDV~S~Gvll~ellt  523 (650)
                       |+||||||+||||+.++.+||+|||+++....     ......+|+.|+|||++.+  ..++.++|||||||++|||++
T Consensus       215 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt  288 (371)
T 3q60_A          215 -LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC  288 (371)
T ss_dssp             -EEETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred             -CccCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence             99999999999999999999999999986532     1213457799999999987  679999999999999999999


Q ss_pred             CCCCCCCCCCcccchhHHHHHHhccCCCcccccCccC--C--CCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          524 GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL--R--NGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       524 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l--~--~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      |+.||.........        .+............+  .  ...+   ..+.+++.+||+.||++|||+.|+++
T Consensus       289 g~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          289 LFLPFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLP---DFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             SSCSTTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCC---HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCCCCcCccccc--------chhhhhhhhccccccchhhccCCC---HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99998744322110        000000000000011  1  1122   34556777999999999999999973


No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.7e-38  Score=331.41  Aligned_cols=252  Identities=22%  Similarity=0.305  Sum_probs=193.7

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--------hhHHHHHHHHHHHhhCCCCceeeecceeecC
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEE  392 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  392 (650)
                      ..++|.+.+.||+|+||.||+++.. +++.||||++.....        .....+.+|+.++++++||||+++++++..+
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3467999999999999999999864 578999999875422        1223478999999999999999999998765


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC---eEEee
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI---PKISD  469 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~D  469 (650)
                      . .++||||+++++|.+++.   ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             c-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEcc
Confidence            5 899999999999999886   3467999999999999999999999987   999999999999987664   99999


Q ss_pred             eecccccccCCCCCccceeecCccccChhccc---cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHh
Q 006317          470 FGMARLFEMDQSQGDTSRIVGTFGYMAPEYVT---RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKN  546 (650)
Q Consensus       470 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~  546 (650)
                      ||+++.....   .......||+.|+|||++.   ...++.++||||||+++|||++|+.||.......  .+.......
T Consensus       161 fg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~  235 (322)
T 2ycf_A          161 FGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITSG  235 (322)
T ss_dssp             CTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHHHT
T ss_pred             Cccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHHhC
Confidence            9999865421   1223456899999999974   4678999999999999999999999986433221  122111111


Q ss_pred             ccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          547 WNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       547 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .    . . ..+......+   ..+.+++.+||+.||++||++.|+++
T Consensus       236 ~----~-~-~~~~~~~~~~---~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          236 K----Y-N-FIPEVWAEVS---EKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             C----C-C-CCHHHHTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             c----c-c-cCchhhhhcC---HHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            0    0 0 0000001112   34557788999999999999999984


No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=6.2e-38  Score=333.82  Aligned_cols=258  Identities=22%  Similarity=0.258  Sum_probs=189.7

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCC------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEET------  393 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  393 (650)
                      .++|+..+.||+|+||.||+++.. +++.||||++....  ......+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            468999999999999999999854 58899999997542  233456889999999999999999999987654      


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      ..++||||+++ +|.+++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            67999999975 6777764     35899999999999999999999987   999999999999999999999999999


Q ss_pred             cccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC---
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG---  550 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---  550 (650)
                      +.....   .......||+.|+|||++.+..++.++||||||+++|||++|+.||......   +............   
T Consensus       175 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~  248 (371)
T 2xrw_A          175 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLGTPCPE  248 (371)
T ss_dssp             ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHC-CCCCCHH
T ss_pred             cccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHH
Confidence            865422   1233457899999999999999999999999999999999999998643211   1111111100000   


Q ss_pred             ----------------------CcccccCccCCCC----ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 ----------------------TALNLIDPTLRNG----SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ----------------------~~~~~id~~l~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                                            ...+.+.......    .......+.+++.+||+.||++|||+.|+++-
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                                  0000000000011    01123456788899999999999999999964


No 216
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=5.7e-38  Score=358.18  Aligned_cols=248  Identities=24%  Similarity=0.265  Sum_probs=201.3

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC---chhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  397 (650)
                      .++|++.++||+|+||.||+++.. +++.||||++++..   ......+..|..++..+ +||||+++++++.+.+..+|
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            467999999999999999999865 47789999997642   22344678899999887 79999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFE  477 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~  477 (650)
                      ||||+++|+|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++...
T Consensus       420 V~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             EEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            9999999999999974   357999999999999999999999987   9999999999999999999999999998543


Q ss_pred             cCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccC
Q 006317          478 MDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLID  557 (650)
Q Consensus       478 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id  557 (650)
                      ..  ........||+.|+|||++.+..++.++|||||||++|||++|+.||....   ..++......   ..       
T Consensus       494 ~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~---~~~~~~~i~~---~~-------  558 (674)
T 3pfq_A          494 WD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDELFQSIME---HN-------  558 (674)
T ss_dssp             CT--TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHS---SC-------
T ss_pred             cC--CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC---HHHHHHHHHh---CC-------
Confidence            22  223445789999999999999999999999999999999999999986422   2222222211   10       


Q ss_pred             ccCCCCChHHHHHHHHHHhcccccCCCCCCCH-----HHHHH
Q 006317          558 PTLRNGSSSEIMRCVHIGLLCVQENVANRPTM-----ASVVV  594 (650)
Q Consensus       558 ~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~-----~evl~  594 (650)
                      ..+......   ++.+|+..||+.||++||++     +||++
T Consensus       559 ~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          559 VAYPKSMSK---EAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             CCCCTTSCH---HHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             CCCCccCCH---HHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            111122233   34567779999999999997     77764


No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8.9e-39  Score=343.01  Aligned_cols=260  Identities=22%  Similarity=0.317  Sum_probs=193.7

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCe------eE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE------RL  396 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~  396 (650)
                      ..+|...++||+|+||.||+++...+..+|+|++......    ..+|+.+++.++||||+++++++.....      .+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            4578899999999999999999877777999988654322    2369999999999999999999865433      78


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC-CCCCeEEeeeecccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD-ADMIPKISDFGMARL  475 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~~  475 (650)
                      +||||++++.+............+++..++.++.||+.||+|||+.+   |+||||||+||||+ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            99999987655544333334567999999999999999999999987   99999999999999 799999999999987


Q ss_pred             cccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC----
Q 006317          476 FEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG----  550 (650)
Q Consensus       476 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----  550 (650)
                      ......   .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......   +.+....+.....    
T Consensus       192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~p~~~~  265 (394)
T 4e7w_A          192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI---DQLVEIIKVLGTPSREQ  265 (394)
T ss_dssp             CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHH
T ss_pred             ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHH
Confidence            643322   2335689999999998765 5899999999999999999999998643221   1111111111000    


Q ss_pred             ------CcccccCccCCCCChH------HHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 ------TALNLIDPTLRNGSSS------EIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ------~~~~~id~~l~~~~~~------~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                            ...+..-+........      ....+.+++.+||+.||++|||+.|+++-
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence                  0000000111111111      11356678889999999999999999964


No 218
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.9e-38  Score=339.46  Aligned_cols=202  Identities=28%  Similarity=0.473  Sum_probs=155.1

Q ss_pred             cCCCc-CCcccccCceeEEEeecc---CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec--CCeeEE
Q 006317          324 NNFST-DNKLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--ETERLL  397 (650)
Q Consensus       324 ~~f~~-~~~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l  397 (650)
                      +.|++ .++||+|+||.||+++..   +++.||||++.....  ...+.+|+.++++++||||+++++++..  ....++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34555 568999999999999865   478899999976533  2367899999999999999999999954  678899


Q ss_pred             EEecCCCCChhHHHHhhh------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe----CCCCCeEE
Q 006317          398 IYEFVPNSSVDKFIFDAI------KRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL----DADMIPKI  467 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl  467 (650)
                      ||||+.+ +|.+++....      ....+++..++.++.||+.||+|||+.+   |+||||||+||||    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999975 7877775422      1224999999999999999999999987   9999999999999    77889999


Q ss_pred             eeeecccccccCCC-CCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCC
Q 006317          468 SDFGMARLFEMDQS-QGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFR  531 (650)
Q Consensus       468 ~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~  531 (650)
                      +|||+++.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            99999987653221 1233456799999999999874 5899999999999999999999998643


No 219
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=4.4e-38  Score=340.41  Aligned_cols=258  Identities=23%  Similarity=0.328  Sum_probs=191.4

Q ss_pred             cCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecC----C--eeE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE----T--ERL  396 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~  396 (650)
                      .+|+..+.||+|+||.||+|+.. +|+.||||++.....    ...+|++++++++||||+++++++...    +  ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            46888899999999999999975 589999999865432    234699999999999999999988542    2  357


Q ss_pred             EEEecCCCCChhHHHHhh-hccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC-CCeEEeeeeccc
Q 006317          397 LIYEFVPNSSVDKFIFDA-IKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD-MIPKISDFGMAR  474 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DFGla~  474 (650)
                      +||||+++ +|.+++... .....+++..++.++.||++||+|||+.+   |+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 566665432 23567999999999999999999999987   9999999999999965 578999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccC----
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNE----  549 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~----  549 (650)
                      .+....   ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   .+.+....+....    
T Consensus       206 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~~~l~~i~~~lg~p~~~  279 (420)
T 1j1b_A          206 QLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG---VDQLVEIIKVLGTPTRE  279 (420)
T ss_dssp             ECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCSCCHH
T ss_pred             hcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCHH
Confidence            654322   22335789999999998765 789999999999999999999999864322   1111111111100    


Q ss_pred             ------CCcccccCccCCCCChH------HHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          550 ------GTALNLIDPTLRNGSSS------EIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       550 ------~~~~~~id~~l~~~~~~------~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                            ....+...+.+......      ....+.+|+.+||+.||++|||+.|+++.
T Consensus       280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                  01111111111111111      11356678889999999999999999853


No 220
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.3e-38  Score=337.44  Aligned_cols=267  Identities=21%  Similarity=0.281  Sum_probs=187.6

Q ss_pred             hHHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecCCe--
Q 006317          318 TIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE--  394 (650)
Q Consensus       318 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--  394 (650)
                      ......++|++.++||+|+||.||+|+.. +|+.||||++...... ...+.+|+..+..++||||+++++++.....  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34456688999999999999999999864 5889999998654322 2345678888899999999999999865433  


Q ss_pred             -----eEEEEecCCCCChhHHHHh-hhccCCCCHHHHHHHHHHHHHHHHHhh--hcCCCcEEecCCCCCceEeCC-CCCe
Q 006317          395 -----RLLIYEFVPNSSVDKFIFD-AIKRVQLDWETRYKIIGGIARGILYLH--EDSRLRIIHRDLKASNILLDA-DMIP  465 (650)
Q Consensus       395 -----~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlk~~NILl~~-~~~~  465 (650)
                           .++||||+++ +|...+.. ......+++..++.++.||+.||.|||  +.+   |+||||||+||||+. ++.+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcE
Confidence                 7899999987 45544443 234567899999999999999999999  766   999999999999997 8999


Q ss_pred             EEeeeecccccccCCCCCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          466 KISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       466 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      ||+|||+++......   ......||+.|+|||++.+. .++.++||||||+++|||++|+.||......   ..+....
T Consensus       172 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~~~  245 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA---GQLHEIV  245 (360)
T ss_dssp             EECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH
T ss_pred             EEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH---HHHHHHH
Confidence            999999998665332   22335689999999998765 4899999999999999999999998643322   1111111


Q ss_pred             Hh-----------ccCC-CcccccCc-------cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          545 KN-----------WNEG-TALNLIDP-------TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       545 ~~-----------~~~~-~~~~~id~-------~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..           +... ......+.       .+..........+.+++.+||+.||++|||+.|+++-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            11           1000 00000000       0011111233566788889999999999999999854


No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.1e-38  Score=329.47  Aligned_cols=262  Identities=20%  Similarity=0.308  Sum_probs=191.5

Q ss_pred             ccCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceee-----------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF-----------  390 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-----------  390 (650)
                      .++|...+.||+|+||.||+++... ++.||||++..........+.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4678999999999999999998754 8899999998766666678999999999999999999998873           


Q ss_pred             ---cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC-CCCCeE
Q 006317          391 ---EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD-ADMIPK  466 (650)
Q Consensus       391 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~k  466 (650)
                         +....++||||++ |+|.+++.    ...+++..++.++.||+.||+|||+.+   |+||||||+|||++ +++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence               3467899999998 69998874    356999999999999999999999987   99999999999997 567999


Q ss_pred             EeeeecccccccCCC-CCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHH
Q 006317          467 ISDFGMARLFEMDQS-QGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW  544 (650)
Q Consensus       467 l~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~  544 (650)
                      |+|||+++....... ........+|..|+|||.+.+ ..++.++||||||+++|||++|+.||......   +......
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~  238 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL---EQMQLIL  238 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHH
Confidence            999999987643221 122333467899999998876 67899999999999999999999998643221   1111111


Q ss_pred             HhccCC---Ccccc-------cCccCC--CCC-----hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          545 KNWNEG---TALNL-------IDPTLR--NGS-----SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       545 ~~~~~~---~~~~~-------id~~l~--~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......   ...++       +.....  ...     ......+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            110000   00000       000000  000     0112345678889999999999999999863


No 222
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4.7e-38  Score=333.84  Aligned_cols=263  Identities=19%  Similarity=0.265  Sum_probs=199.1

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecC-----Ce
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEE-----TE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  394 (650)
                      ..++|+..++||+|+||.||+++.. +++.||||++..... .....+.+|+.++.+++||||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            3568999999999999999999854 578899999975433 3345788999999999999999999998654     46


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+. |+|.+++..    ..+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       105 ~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceE
Confidence            899999997 588888753    46999999999999999999999987   9999999999999999999999999998


Q ss_pred             ccccCCCCC-ccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          475 LFEMDQSQG-DTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       475 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ......... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+   .+............
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQ  253 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCH
Confidence            765332221 2344679999999998765 458999999999999999999999986433222   11111111100000


Q ss_pred             c-----------cccCccC--CCCC-----hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          553 L-----------NLIDPTL--RNGS-----SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       553 ~-----------~~id~~l--~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      .           .......  ....     ......+.+++.+||+.||++|||+.|+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0           0000000  0000     0112345678889999999999999999864


No 223
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=5.2e-38  Score=340.68  Aligned_cols=199  Identities=22%  Similarity=0.290  Sum_probs=170.9

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhC------CCCceeeecceeecCCe
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL------QHRNLVRLLGFSFEETE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~  394 (650)
                      ...+|++.++||+|+||.||+++.. +++.||||++.... .....+.+|+.++..+      .|+||+++++++.....
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            3467999999999999999999864 48899999997642 3334677888888776      57799999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC--eEEeeeec
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI--PKISDFGM  472 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DFGl  472 (650)
                      .++||||+. ++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.  +||+|||+
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             EEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccc
Confidence            999999996 6899888753 2345999999999999999999999997   999999999999999987  99999999


Q ss_pred             ccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCC
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFR  531 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~  531 (650)
                      ++....     ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       249 a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          249 SCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            975432     223357899999999999999999999999999999999999988643


No 224
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.5e-38  Score=335.16  Aligned_cols=261  Identities=21%  Similarity=0.275  Sum_probs=193.3

Q ss_pred             HhhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeecC------
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE------  392 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  392 (650)
                      ....++|...++||+|+||.||+++. .+|+.||||++......    ..+|+.+++.++||||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            34567899999999999999999985 56899999998654322    24699999999999999999998442      


Q ss_pred             --------------------------------CeeEEEEecCCCCChhHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHh
Q 006317          393 --------------------------------TERLLIYEFVPNSSVDKFIFDAI-KRVQLDWETRYKIIGGIARGILYL  439 (650)
Q Consensus       393 --------------------------------~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yL  439 (650)
                                                      ...++||||++ |+|.+.+.... ....+++..++.++.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                            34789999998 58888876532 356799999999999999999999


Q ss_pred             hhcCCCcEEecCCCCCceEeC-CCCCeEEeeeecccccccCCCCCccceeecCccccChhccccC-CCCccccccchhHH
Q 006317          440 HEDSRLRIIHRDLKASNILLD-ADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVL  517 (650)
Q Consensus       440 H~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvl  517 (650)
                      |+.+   |+||||||+|||++ .++.+||+|||+++......   ......||..|+|||++.+. .++.++||||||++
T Consensus       158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            9987   99999999999998 68899999999998664332   22345689999999998775 58999999999999


Q ss_pred             HHHHHhCCCCCCCCCCcccchhHHHHHHhccCC----------CcccccCccCCCCCh------HHHHHHHHHHhccccc
Q 006317          518 VLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG----------TALNLIDPTLRNGSS------SEIMRCVHIGLLCVQE  581 (650)
Q Consensus       518 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~id~~l~~~~~------~~~~~~~~l~~~Cl~~  581 (650)
                      +|||++|+.||.....   .+.+..........          ...+..-+.+.....      .....+.+++.+||+.
T Consensus       232 l~ell~g~~pf~~~~~---~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (383)
T 3eb0_A          232 FGELILGKPLFSGETS---IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY  308 (383)
T ss_dssp             HHHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence            9999999999864322   12221111111110          000000011111100      0113356778899999


Q ss_pred             CCCCCCCHHHHHH
Q 006317          582 NVANRPTMASVVV  594 (650)
Q Consensus       582 ~p~~RPt~~evl~  594 (650)
                      ||++|||+.|+++
T Consensus       309 dP~~R~t~~e~l~  321 (383)
T 3eb0_A          309 EPDLRINPYEAMA  321 (383)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999984


No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=3.7e-38  Score=334.76  Aligned_cols=258  Identities=24%  Similarity=0.323  Sum_probs=182.2

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeecccc--CchhHHHHHHHHHHHhhCCCCceeeecceeecC------
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEE------  392 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  392 (650)
                      ..++|+..+.||+|+||.||+|+. .+|+.||||++...  .......+.+|+.++++++||||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            357899999999999999999985 46889999999654  223445788999999999999999999998654      


Q ss_pred             CeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeec
Q 006317          393 TERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGM  472 (650)
Q Consensus       393 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl  472 (650)
                      ...++|+|++ +++|.+++..    ..+++..++.++.||++||+|||+.+   |+||||||+||||+.++.+||+|||+
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred             CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence            5679999999 6899988753    56999999999999999999999987   99999999999999999999999999


Q ss_pred             ccccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC-
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG-  550 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-  550 (650)
                      ++....     ......||..|+|||++.+ ..++.++||||||+++|||++|+.||.....   .+.+.......... 
T Consensus       179 a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~l~~i~~~~g~p~  250 (367)
T 2fst_X          179 ARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH---IDQLKLILRLVGTPG  250 (367)
T ss_dssp             -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCSCC
T ss_pred             cccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCC
Confidence            986432     1234578999999999887 6789999999999999999999999864322   12222111111100 


Q ss_pred             ----------CcccccCc--cCCCCChH-----HHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 ----------TALNLIDP--TLRNGSSS-----EIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ----------~~~~~id~--~l~~~~~~-----~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                                .....+..  ........     ....+.+++.+||+.||++|||+.|+++-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                      00000000  00000111     11345678889999999999999999865


No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=3.9e-38  Score=330.05  Aligned_cols=262  Identities=21%  Similarity=0.276  Sum_probs=200.5

Q ss_pred             hccCCCcCCcccccCceeEEEeec--cCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCc------eeeecceeecCC
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL--SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN------LVRLLGFSFEET  393 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~  393 (650)
                      ..++|++.+.||+|+||.||++..  .+++.||||+++... .....+.+|+.++.+++|++      ++++++++...+
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            346899999999999999999985  358899999997542 33456888999998887654      999999999999


Q ss_pred             eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC------------
Q 006317          394 ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA------------  461 (650)
Q Consensus       394 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~------------  461 (650)
                      ..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.            
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----
T ss_pred             cEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccc
Confidence            999999999 88999998753 2346899999999999999999999987   999999999999988            


Q ss_pred             -------CCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCc
Q 006317          462 -------DMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGE  534 (650)
Q Consensus       462 -------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~  534 (650)
                             ++.+||+|||+++....     ......||+.|+|||++.+..++.++||||||+++|||++|+.|+......
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  240 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK  240 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred             cccccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence                   67899999999976432     123457899999999999999999999999999999999999998754322


Q ss_pred             ccchhHHHHH--------HhccCCCcc------------------cccCcc--CCCCChHHHHHHHHHHhcccccCCCCC
Q 006317          535 EAEDLLTYAW--------KNWNEGTAL------------------NLIDPT--LRNGSSSEIMRCVHIGLLCVQENVANR  586 (650)
Q Consensus       535 ~~~~l~~~~~--------~~~~~~~~~------------------~~id~~--l~~~~~~~~~~~~~l~~~Cl~~~p~~R  586 (650)
                      +.........        .........                  ....+.  ...........+.+++.+||+.||++|
T Consensus       241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  320 (339)
T 1z57_A          241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR  320 (339)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence            2111111110        000000000                  000000  001122344567788999999999999


Q ss_pred             CCHHHHHH
Q 006317          587 PTMASVVV  594 (650)
Q Consensus       587 Pt~~evl~  594 (650)
                      ||+.|+++
T Consensus       321 pt~~ell~  328 (339)
T 1z57_A          321 ITLREALK  328 (339)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999974


No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.6e-38  Score=333.35  Aligned_cols=261  Identities=22%  Similarity=0.314  Sum_probs=201.4

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchh-----------------HHHHHHHHHHHhhCCCCceeee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG-----------------ELEFKNEVLLVARLQHRNLVRL  385 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l  385 (650)
                      .++|.+.+.||+|+||.||+++. +++.||||++.......                 ...+.+|+.++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999998 89999999987543221                 1678999999999999999999


Q ss_pred             cceeecCCeeEEEEecCCCCChhHH------HHhhhccCCCCHHHHHHHHHHHHHHHHHhhh-cCCCcEEecCCCCCceE
Q 006317          386 LGFSFEETERLLIYEFVPNSSVDKF------IFDAIKRVQLDWETRYKIIGGIARGILYLHE-DSRLRIIHRDLKASNIL  458 (650)
Q Consensus       386 ~g~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlk~~NIL  458 (650)
                      ++++.+.+..++||||+++++|.++      +... ....+++..++.++.||+.||.|||+ .+   |+||||||+|||
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil  184 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL  184 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence            9999999999999999999999998      4321 25679999999999999999999998 76   999999999999


Q ss_pred             eCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccC-CCCc-cccccchhHHHHHHHhCCCCCCCCCCccc
Q 006317          459 LDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRG-HFSI-KSDVFSFGVLVLEIISGQKNNSFRIGEEA  536 (650)
Q Consensus       459 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-~sDV~S~Gvll~elltG~~p~~~~~~~~~  536 (650)
                      ++.++.+||+|||++......    ......||..|+|||.+.+. .++. ++||||||+++|||++|+.|+......  
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--  258 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--  258 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred             EcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence            999999999999999865432    23345789999999999887 6666 999999999999999999998643321  


Q ss_pred             chhHHHHHHhcc-CCC-cccccCccCCCC----ChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          537 EDLLTYAWKNWN-EGT-ALNLIDPTLRNG----SSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       537 ~~l~~~~~~~~~-~~~-~~~~id~~l~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .+.......... ... ......+.....    .......+.+++.+||+.||++|||+.|+++
T Consensus       259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            122221111100 000 000000000000    0111234567778999999999999999985


No 228
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.3e-38  Score=330.57  Aligned_cols=260  Identities=25%  Similarity=0.378  Sum_probs=197.2

Q ss_pred             hhccCCCcCCcccccCceeEEEeec--cCCcceeEeeccccCch--hHHHHHHHHHHHhhC---CCCceeeecceee---
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL--SHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARL---QHRNLVRLLGFSF---  390 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~H~niv~l~g~~~---  390 (650)
                      .+.++|++.+.||+|+||.||+++.  .+|+.||||++......  ....+.+|+.+++.+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            4567899999999999999999986  45788999998654321  122466777777666   8999999999987   


Q ss_pred             --cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          391 --EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       391 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                        .....++||||++ |+|.+++... ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEe
Confidence              5567899999998 6999998753 2345999999999999999999999987   9999999999999999999999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhcc
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWN  548 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~  548 (650)
                      |||+++......   ......||..|+|||++.+..++.++||||||+++|||++|+.|+.....   .+.+........
T Consensus       163 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~  236 (326)
T 1blx_A          163 DFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIG  236 (326)
T ss_dssp             SCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHC
T ss_pred             cCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHcC
Confidence            999998654221   23345789999999999999999999999999999999999999864322   122211111110


Q ss_pred             --------CCCcc--cccC----c---cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          549 --------EGTAL--NLID----P---TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       549 --------~~~~~--~~id----~---~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                              .....  ..+.    .   .+....+   ..+.+++.+||+.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC---HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCcccCccccccchhhhcccCcchhhhccccCC---HHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                    00000  0000    0   0111122   34456778999999999999999985


No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3.4e-38  Score=333.20  Aligned_cols=263  Identities=22%  Similarity=0.312  Sum_probs=196.9

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecC-----Ce
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEE-----TE  394 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  394 (650)
                      ..++|...+.||+|+||.||+++.. +|+.||||++..... .....+.+|+.++++++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            4578999999999999999999865 588999999975432 3345688999999999999999999987654     67


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .++||||+. ++|.+++..    ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        89 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            899999997 589888753    46999999999999999999999987   9999999999999999999999999998


Q ss_pred             ccccCCCCC--------ccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHH
Q 006317          475 LFEMDQSQG--------DTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWK  545 (650)
Q Consensus       475 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~  545 (650)
                      .........        ......||+.|+|||++.. ..++.++||||||+++|||++|+.||......   +.+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~  237 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR---HQLLLIFG  237 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHH
T ss_pred             ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHH
Confidence            765322111        1223578999999998765 67899999999999999999999998643211   11111111


Q ss_pred             hccCCC---ccc---------ccC--ccCCCCC-----hHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          546 NWNEGT---ALN---------LID--PTLRNGS-----SSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       546 ~~~~~~---~~~---------~id--~~l~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ......   ...         .+.  +......     ......+.+++.+||+.||++|||+.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            111000   000         000  0000000     0112345678889999999999999999864


No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=8.6e-38  Score=320.43  Aligned_cols=252  Identities=27%  Similarity=0.354  Sum_probs=199.4

Q ss_pred             hhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCeeEE
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETERLL  397 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  397 (650)
                      ...++|++.++||+|+||.||+++.. +++.||||++....  ......+.+|+.++++++||||+++++++.+....++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            34578999999999999999999865 68899999986543  2345678999999999999999999999999999999


Q ss_pred             EEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC---CCeEEeeeeccc
Q 006317          398 IYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD---MIPKISDFGMAR  474 (650)
Q Consensus       398 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~DFGla~  474 (650)
                      ||||+++++|.+++..   ...+++..++.++.||+.||.|||+.+   ++||||||+|||++.+   +.+||+|||++.
T Consensus        99 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           99 VGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            9999999999998864   357999999999999999999999987   9999999999999764   469999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      ......   ......||..|+|||.+.+ .++.++||||||+++|||++|+.|+....   ..+.......    +... 
T Consensus       173 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~~~~----~~~~-  240 (287)
T 2wei_A          173 CFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDILKRVET----GKYA-  240 (287)
T ss_dssp             TBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHH----CCCC-
T ss_pred             eecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC---HHHHHHHHHc----CCCC-
Confidence            654322   2223468999999998875 58999999999999999999999986332   1122221111    1100 


Q ss_pred             ccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          555 LIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       555 ~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                       .+.......+.   .+.+++.+||+.||++|||+.|+++
T Consensus       241 -~~~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          241 -FDLPQWRTISD---DAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             -CCSGGGTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCchhhhhcCH---HHHHHHHHHcccChhhCcCHHHHhc
Confidence             00000011222   4556777999999999999999986


No 231
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=4e-38  Score=358.35  Aligned_cols=255  Identities=22%  Similarity=0.340  Sum_probs=199.2

Q ss_pred             hccCCCcCCcccccCceeEEEeeccC----CcceeEeeccccCc-hhHHHHHHHHHHHhhCCCCceeeecceeecCCeeE
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEETERL  396 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  396 (650)
                      ..++|+..+.||+|+||.||+|++..    +..||||++..... .....+.+|+.++++++||||+++++++. ++..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            44678888999999999999998643    45699999876433 33457899999999999999999999985 45689


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      +||||+++|+|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       467 lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             EEEECCTTCBHHHHHHH--TTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             EEEEcCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            99999999999999974  3456999999999999999999999987   999999999999999999999999999876


Q ss_pred             ccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhccCCCcccc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWNEGTALNL  555 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  555 (650)
                      ..... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||....   ..+..........       
T Consensus       542 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~---~~~~~~~i~~~~~-------  610 (656)
T 2j0j_A          542 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK---NNDVIGRIENGER-------  610 (656)
T ss_dssp             CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC---HHHHHHHHHHTCC-------
T ss_pred             CCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHcCCC-------
Confidence            43221 12233457889999999999999999999999999999997 888875322   1222222211110       


Q ss_pred             cCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          556 IDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       556 id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                        ..+....+.   .+.+++.+||+.||++|||+.||++.|+.
T Consensus       611 --~~~~~~~~~---~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          611 --LPMPPNCPP---TLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             --CCCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCccccH---HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence              111122233   45567779999999999999999999864


No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.7e-37  Score=319.88  Aligned_cols=253  Identities=25%  Similarity=0.413  Sum_probs=189.2

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec----------
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----------  391 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----------  391 (650)
                      .++|+..+.||+|+||.||+++.. +++.||||++... ......+.+|+.++++++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467899999999999999999864 6889999999653 2344578899999999999999999998765          


Q ss_pred             ---CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEe
Q 006317          392 ---ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKIS  468 (650)
Q Consensus       392 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~  468 (650)
                         ....++||||+++|+|.+++..  ....+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               3567899999999999999975  3456889999999999999999999987   9999999999999999999999


Q ss_pred             eeecccccccCCC------------CCccceeecCccccChhccccC-CCCccccccchhHHHHHHHhCCCCCCCCCCcc
Q 006317          469 DFGMARLFEMDQS------------QGDTSRIVGTFGYMAPEYVTRG-HFSIKSDVFSFGVLVLEIISGQKNNSFRIGEE  535 (650)
Q Consensus       469 DFGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~  535 (650)
                      |||+++.......            ........||..|+|||++.+. .++.++||||||+++|||++   |+..  ...
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~--~~~  233 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST--GME  233 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS--HHH
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC--chh
Confidence            9999986542210            1123345689999999999864 78999999999999999998   3321  111


Q ss_pred             cchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          536 AEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       536 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ........    ....  ..+.+.+.....   ..+.+++.+||+.||.+|||+.++++.
T Consensus       234 ~~~~~~~~----~~~~--~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          234 RVNILKKL----RSVS--IEFPPDFDDNKM---KVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHHHH----HSTT--CCCCTTCCTTTS---HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhc----cccc--cccCccccccch---HHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            11111111    1100  011111222222   345567789999999999999999864


No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4e-37  Score=327.35  Aligned_cols=262  Identities=19%  Similarity=0.258  Sum_probs=197.1

Q ss_pred             ccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHHhhCC-----------CCceeeecceee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----------HRNLVRLLGFSF  390 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~  390 (650)
                      .++|.+.+.||+|+||.||+++. .+++.||||++.... .....+.+|+.++.+++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            36799999999999999999985 468899999997543 33456788999998886           899999999987


Q ss_pred             cCC----eeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeC-----
Q 006317          391 EET----ERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLD-----  460 (650)
Q Consensus       391 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~-----  460 (650)
                      ..+    ..++||||+ +++|.+++... ....+++..++.++.||+.||+|||++ +   |+||||||+||||+     
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCC
Confidence            654    789999999 88999998753 345699999999999999999999997 7   99999999999994     


Q ss_pred             -CCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCccc---
Q 006317          461 -ADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEA---  536 (650)
Q Consensus       461 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~---  536 (650)
                       ..+.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||........   
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence             4458999999999865432     2234789999999999999999999999999999999999999874432211   


Q ss_pred             chhHHHHHHhc------------------cCCCcccccCcc-----------CCCCChHHHHHHHHHHhcccccCCCCCC
Q 006317          537 EDLLTYAWKNW------------------NEGTALNLIDPT-----------LRNGSSSEIMRCVHIGLLCVQENVANRP  587 (650)
Q Consensus       537 ~~l~~~~~~~~------------------~~~~~~~~id~~-----------l~~~~~~~~~~~~~l~~~Cl~~~p~~RP  587 (650)
                      .+.+.......                  ........+...           ...........+.+++.+||+.||++||
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            11111111100                  000000000000           0011234456677899999999999999


Q ss_pred             CHHHHHHH
Q 006317          588 TMASVVVM  595 (650)
Q Consensus       588 t~~evl~~  595 (650)
                      |+.|+++.
T Consensus       327 t~~ell~h  334 (373)
T 1q8y_A          327 DAGGLVNH  334 (373)
T ss_dssp             CHHHHHTC
T ss_pred             CHHHHhhC
Confidence            99999864


No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2.9e-37  Score=329.98  Aligned_cols=207  Identities=22%  Similarity=0.295  Sum_probs=172.6

Q ss_pred             hhhHHhhccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCC-CC-----ceeeecce
Q 006317          316 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HR-----NLVRLLGF  388 (650)
Q Consensus       316 ~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g~  388 (650)
                      ........++|++.++||+|+||.||+|+.. +++.||||+++... ....++..|+.++..++ |+     +|++++++
T Consensus        46 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             eecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence            3444456789999999999999999999864 57889999997542 33446778888888875 55     49999999


Q ss_pred             eecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC--CCCCeE
Q 006317          389 SFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD--ADMIPK  466 (650)
Q Consensus       389 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~--~~~~~k  466 (650)
                      +...+..++||||++ ++|.+++... ....+++..+..++.||+.||.|||++ ..+|+||||||+||||+  .++.+|
T Consensus       125 ~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             EEETTEEEEEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             eccCCceEEEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence            999999999999996 5999998753 234699999999999999999999963 12499999999999995  478899


Q ss_pred             EeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCC
Q 006317          467 ISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFR  531 (650)
Q Consensus       467 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~  531 (650)
                      |+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       202 L~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          202 IVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             ECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             EEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999865422     23457899999999999999999999999999999999999998743


No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.7e-37  Score=324.39  Aligned_cols=255  Identities=24%  Similarity=0.345  Sum_probs=176.4

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc-hhHHHHHHHHH-HHhhCCCCceeeecceeecCCeeEEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVL-LVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      .++|+..+.||+|+||.||+++.. +|+.||||++..... ....++..|+. +++.++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            467889999999999999999874 688999999976533 23345556665 777889999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeeccccc
Q 006317          400 EFVPNSSVDKFIFDAI--KRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      ||+++ +|.+++....  ....+++..++.++.|++.||.|||+. +   |+||||||+||||+.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 8888775421  256799999999999999999999998 7   999999999999999999999999999865


Q ss_pred             ccCCCCCccceeecCccccChhcc----ccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          477 EMDQSQGDTSRIVGTFGYMAPEYV----TRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       477 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ....   ......||..|+|||++    .+..++.++||||||+++|||++|+.|+......     ...... ...+..
T Consensus       177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~-~~~~~~  247 (327)
T 3aln_A          177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQ-VVKGDP  247 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSCC
T ss_pred             cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHH-HhcCCC
Confidence            4322   22234689999999998    4567899999999999999999999998632110     000000 000000


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .. +.........   ..+.+++.+||+.||++|||+.||++
T Consensus       248 ~~-~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          248 PQ-LSNSEEREFS---PSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CC-CCCCSSCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC-CCCcccccCC---HHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            00 0111111122   34556777999999999999999974


No 236
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.2e-37  Score=329.57  Aligned_cols=257  Identities=24%  Similarity=0.339  Sum_probs=193.1

Q ss_pred             hccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceeecCCee---
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEETER---  395 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---  395 (650)
                      ..++|...+.||+|+||.||+++.. +|+.||||++.....  .....+.+|+.++++++||||+++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            3578999999999999999999854 588999999976432  2345788999999999999999999999877654   


Q ss_pred             ---EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeec
Q 006317          396 ---LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGM  472 (650)
Q Consensus       396 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl  472 (650)
                         ++||||+. ++|.+++.     ..+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence               99999997 57877653     35999999999999999999999987   99999999999999999999999999


Q ss_pred             ccccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCC-
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEG-  550 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-  550 (650)
                      ++.....     .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.....   .+.+.......... 
T Consensus       191 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~  262 (371)
T 4exu_A          191 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVTGVPG  262 (371)
T ss_dssp             C-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCC
T ss_pred             ccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCc
Confidence            9855422     233568999999999887 6889999999999999999999999864321   11111111110000 


Q ss_pred             ----------Ccccc---cCccCCCC----ChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          551 ----------TALNL---IDPTLRNG----SSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       551 ----------~~~~~---id~~l~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                                .....   +.......    .......+.+++.+||+.||++|||+.|+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                      00000   00000000    00112355678889999999999999999864


No 237
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-37  Score=323.06  Aligned_cols=242  Identities=24%  Similarity=0.454  Sum_probs=189.1

Q ss_pred             hccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch------hHHHHHHHHHHHhhC----CCCceeeecceee
Q 006317          322 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ------GELEFKNEVLLVARL----QHRNLVRLLGFSF  390 (650)
Q Consensus       322 ~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~g~~~  390 (650)
                      ..++|+..+.||+|+||.||+++. .+++.||||++......      ....+.+|+.++.++    +||||+++++++.
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~  108 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE  108 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence            457899999999999999999986 45889999999765332      122356789999888    8999999999999


Q ss_pred             cCCeeEEEEec-CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC-CCCCeEEe
Q 006317          391 EETERLLIYEF-VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD-ADMIPKIS  468 (650)
Q Consensus       391 ~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~  468 (650)
                      ..+..++|||+ +.+++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+|||++ +++.+||+
T Consensus       109 ~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          109 TQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             ----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred             cCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEE
Confidence            99999999999 789999999974   456999999999999999999999997   99999999999999 88999999


Q ss_pred             eeecccccccCCCCCccceeecCccccChhccccCCCC-ccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhc
Q 006317          469 DFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFS-IKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNW  547 (650)
Q Consensus       469 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~  547 (650)
                      |||+++.....    ......||..|+|||++.+..+. .++||||||+++|||++|+.|+...     ....    .. 
T Consensus       183 dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~----~~-  248 (312)
T 2iwi_A          183 DFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-----QEIL----EA-  248 (312)
T ss_dssp             CCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-----HHHH----HT-
T ss_pred             EcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-----HHHh----hh-
Confidence            99999876532    22345689999999999877664 5899999999999999999998521     0100    00 


Q ss_pred             cCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          548 NEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       548 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                               ...+......   .+.+++.+||+.||++|||+.|+++.
T Consensus       249 ---------~~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          249 ---------ELHFPAHVSP---DCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ---------CCCCCTTSCH---HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ---------ccCCcccCCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence                     0011112223   34567779999999999999999975


No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=3.6e-37  Score=325.03  Aligned_cols=261  Identities=18%  Similarity=0.249  Sum_probs=196.8

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CC-cceeEeeccccCchhHHHHHHHHHHHhhCCCCc------eeeecceeecCCe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HG-QEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN------LVRLLGFSFEETE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~  394 (650)
                      .++|++.+.||+|+||.||+++.. ++ +.||||+++... .....+.+|+.++++++|++      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            478999999999999999999864 34 689999997542 34456888999999987766      8999999999999


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEe---------------
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL---------------  459 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---------------  459 (650)
                      .++||||+ +++|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||               
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence            99999999 56777766542 2346999999999999999999999987   9999999999999               


Q ss_pred             ----CCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcc
Q 006317          460 ----DADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEE  535 (650)
Q Consensus       460 ----~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~  535 (650)
                          +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE  246 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                56789999999999764321     233578999999999999999999999999999999999999986433221


Q ss_pred             cchhHHHHH--------HhccCCCccc------------------ccCc--cCCCCChHHHHHHHHHHhcccccCCCCCC
Q 006317          536 AEDLLTYAW--------KNWNEGTALN------------------LIDP--TLRNGSSSEIMRCVHIGLLCVQENVANRP  587 (650)
Q Consensus       536 ~~~l~~~~~--------~~~~~~~~~~------------------~id~--~l~~~~~~~~~~~~~l~~~Cl~~~p~~RP  587 (650)
                      .........        ..........                  ...+  ........+...+.+++.+||+.||++||
T Consensus       247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  326 (355)
T 2eu9_A          247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI  326 (355)
T ss_dssp             HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence            111111100        0000000000                  0000  00011223345677889999999999999


Q ss_pred             CHHHHHH
Q 006317          588 TMASVVV  594 (650)
Q Consensus       588 t~~evl~  594 (650)
                      |+.|+++
T Consensus       327 t~~e~l~  333 (355)
T 2eu9_A          327 TLAEALL  333 (355)
T ss_dssp             CHHHHTT
T ss_pred             CHHHHhc
Confidence            9999973


No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=327.22  Aligned_cols=256  Identities=23%  Similarity=0.322  Sum_probs=192.7

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccC--chhHHHHHHHHHHHhhCCCCceeeecceeecCCe-----
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE-----  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  394 (650)
                      .++|...+.||+|+||.||+|+.. +|+.||||++....  ......+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            467889999999999999999864 58899999997643  2234568899999999999999999999987654     


Q ss_pred             -eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          395 -RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       395 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                       .++||||+. ++|.+++.     ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence             499999997 58887763     35999999999999999999999987   999999999999999999999999999


Q ss_pred             cccccCCCCCccceeecCccccChhcccc-CCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccC---
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTR-GHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNE---  549 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---  549 (650)
                      +.....     .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.....   .+.+.........   
T Consensus       174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~  245 (353)
T 3coi_A          174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVTGVPGT  245 (353)
T ss_dssp             TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH---HHHHHHHHHHHCBCCH
T ss_pred             cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCH
Confidence            764321     234578999999999887 6789999999999999999999999864321   1111111111000   


Q ss_pred             --------CCc-------ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          550 --------GTA-------LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       550 --------~~~-------~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                              ...       .....+.+..........+.+++.+||+.||++|||+.|+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                    000       0000011111111122345677789999999999999999854


No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.2e-36  Score=316.19  Aligned_cols=249  Identities=25%  Similarity=0.387  Sum_probs=176.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeeccccCch-hH-HHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-GE-LEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      -++|+..+.||+|+||.||+++.. +|+.||||++...... .. ..+.++..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            467888999999999999999875 6889999999765432 22 23445556788889999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      ||+ ++.+..+...  ....+++..++.++.||+.||.|||+. +   |+||||||+|||++.++.+||+|||++.....
T Consensus       104 e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          104 ELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             CCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            999 4455554432  346799999999999999999999985 6   99999999999999999999999999976543


Q ss_pred             CCCCCccceeecCccccChhccc-----cCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVT-----RGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ..   ......||+.|+|||++.     ...++.++||||||+++|||++|+.||.....  ..+.........      
T Consensus       178 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~------  246 (318)
T 2dyl_A          178 DK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTKVLQEE------  246 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHHSC------
T ss_pred             Cc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHHHhccC------
Confidence            22   223456899999999984     55788999999999999999999999863211  111221111110      


Q ss_pred             cccCccCC--CCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          554 NLIDPTLR--NGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       554 ~~id~~l~--~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                         .+.+.  ...+.   .+.+++.+||+.||.+||++.|+++
T Consensus       247 ---~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 ---PPLLPGHMGFSG---DFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             ---CCCCCSSSCCCH---HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---CCCCCccCCCCH---HHHHHHHHHccCChhHCcCHHHHhh
Confidence               01111  11223   3456777999999999999999985


No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.4e-37  Score=324.31  Aligned_cols=243  Identities=25%  Similarity=0.398  Sum_probs=196.9

Q ss_pred             hhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch------hHHHHHHHHHHHhhCC--CCceeeecceeec
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQ--HRNLVRLLGFSFE  391 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~g~~~~  391 (650)
                      ...++|+..+.||+|+||.||+|+. .+++.||||++......      ....+.+|+.++++++  ||||+++++++..
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            4457899999999999999999985 46889999999765322      1234678999999996  5999999999999


Q ss_pred             CCeeEEEEecCCC-CChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeC-CCCCeEEee
Q 006317          392 ETERLLIYEFVPN-SSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLD-ADMIPKISD  469 (650)
Q Consensus       392 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~D  469 (650)
                      .+..++|||++.+ ++|.+++..   ...+++..++.++.||+.||+|||+.+   |+||||||+||||+ +++.+||+|
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred             CCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEee
Confidence            9999999999986 899999874   467999999999999999999999987   99999999999999 789999999


Q ss_pred             eecccccccCCCCCccceeecCccccChhccccCCC-CccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhcc
Q 006317          470 FGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHF-SIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWN  548 (650)
Q Consensus       470 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~  548 (650)
                      ||+++.....    ......||+.|+|||++.+..+ +.++||||||+++|||++|+.|+....     .   . ..   
T Consensus       194 fg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~---~-~~---  257 (320)
T 3a99_A          194 FGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----E---I-IR---  257 (320)
T ss_dssp             CTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----H---H-HH---
T ss_pred             Cccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----h---h-hc---
Confidence            9999866432    2234568999999999987766 688999999999999999999985211     0   0 00   


Q ss_pred             CCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          549 EGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       549 ~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..       ..+....+.   .+.+++.+||+.||++|||+.||++.
T Consensus       258 ~~-------~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          258 GQ-------VFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             CC-------CCCSSCCCH---HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cc-------ccccccCCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00       011122233   34567779999999999999999864


No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=3.8e-37  Score=323.17  Aligned_cols=254  Identities=20%  Similarity=0.238  Sum_probs=170.3

Q ss_pred             hccCCCcCC-cccccCceeEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecceeec----CCee
Q 006317          322 ATNNFSTDN-KLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----ETER  395 (650)
Q Consensus       322 ~~~~f~~~~-~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~  395 (650)
                      ..++|.+.+ +||+|+||.||+++.. +|+.||||++.....    ...+....+..++||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            346788854 6999999999999875 589999999865321    12223344667799999999999876    4457


Q ss_pred             EEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEEeeeec
Q 006317          396 LLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKISDFGM  472 (650)
Q Consensus       396 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGl  472 (650)
                      ++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+   |+||||||+||||+.   ++.+||+|||+
T Consensus       102 ~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence            9999999999999999753 2346999999999999999999999987   999999999999986   45599999999


Q ss_pred             ccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCc
Q 006317          473 ARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTA  552 (650)
Q Consensus       473 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  552 (650)
                      ++.....    ......||+.|+|||++.+..++.++||||||+++|||++|+.||............   ....... .
T Consensus       178 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~-~  249 (336)
T 3fhr_A          178 AKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM---KRRIRLG-Q  249 (336)
T ss_dssp             CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred             ceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH---HHhhhcc-c
Confidence            9865422    223457899999999998888999999999999999999999998643322110000   0000000 0


Q ss_pred             ccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          553 LNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       553 ~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ... ........+   ..+.+++.+||+.||++|||+.|+++.
T Consensus       250 ~~~-~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          250 YGF-PNPEWSEVS---EDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             -CC-CTTTSTTCC---HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccc-CchhhccCC---HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000 000001122   345567779999999999999999974


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.5e-37  Score=335.21  Aligned_cols=253  Identities=21%  Similarity=0.320  Sum_probs=186.8

Q ss_pred             HhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEE
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  398 (650)
                      .....+|...++||+|+||+||.....+++.||||++......   .+.+|+.+++++ +|||||++++++.+....++|
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            3445678999999999999966554557899999999765433   346799999999 799999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC-----CCCeEEeeeecc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA-----DMIPKISDFGMA  473 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~kl~DFGla  473 (650)
                      |||+. |+|.+++..  ....+.+..++.++.||+.||+|||+.+   |+||||||+||||+.     ...+||+|||++
T Consensus        97 ~E~~~-g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           97 IELCA-ATLQEYVEQ--KDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             EECCS-EEHHHHHHS--SSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             EECCC-CCHHHHHHh--cCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            99996 599999874  2334556667899999999999999987   999999999999953     336889999999


Q ss_pred             cccccCCC-CCccceeecCccccChhccc---cCCCCccccccchhHHHHHHHh-CCCCCCCCCCcccchhHHHHHHhcc
Q 006317          474 RLFEMDQS-QGDTSRIVGTFGYMAPEYVT---RGHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEEAEDLLTYAWKNWN  548 (650)
Q Consensus       474 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  548 (650)
                      +....... ........||+.|+|||++.   ...++.++|||||||++|||++ |+.|+......    ....   .. 
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~----~~~~---~~-  242 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR----QANI---LL-  242 (432)
T ss_dssp             ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH----HHHH---HT-
T ss_pred             eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH----HHHH---Hh-
Confidence            87653321 12334467999999999997   4567889999999999999999 88887422111    1111   10 


Q ss_pred             CCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          549 EGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       549 ~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                      .......    + .........+.+++.+||+.||++|||+.||++
T Consensus       243 ~~~~~~~----~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          243 GACSLDC----L-HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TCCCCTT----S-CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCccc----c-CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1000111    1 111223344567888999999999999999984


No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=4.6e-37  Score=333.84  Aligned_cols=253  Identities=23%  Similarity=0.265  Sum_probs=183.6

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEEEecC
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      +.|...++||+|+||+||.+...+|+.||||++....   ...+.+|+.++.++ +||||+++++++.+++..++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            3455568899999999987666679999999986532   33578899999876 8999999999999999999999999


Q ss_pred             CCCChhHHHHhhhccC----CCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCC-------------CCe
Q 006317          403 PNSSVDKFIFDAIKRV----QLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAD-------------MIP  465 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-------------~~~  465 (650)
                      . |+|.+++.......    ..++..++.++.||+.||+|||+.+   |+||||||+||||+.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence            5 69999997532111    1133456789999999999999987   9999999999999754             489


Q ss_pred             EEeeeecccccccCCCCC--ccceeecCccccChhcccc-------CCCCccccccchhHHHHHHHh-CCCCCCCCCCcc
Q 006317          466 KISDFGMARLFEMDQSQG--DTSRIVGTFGYMAPEYVTR-------GHFSIKSDVFSFGVLVLEIIS-GQKNNSFRIGEE  535 (650)
Q Consensus       466 kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~s~~sDV~S~Gvll~ellt-G~~p~~~~~~~~  535 (650)
                      ||+|||+++.........  ......||+.|+|||++.+       ..++.++|||||||++|||+| |+.|+.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            999999998765432211  2234579999999999975       678999999999999999999 888885322111


Q ss_pred             cchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHH
Q 006317          536 AEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVV  594 (650)
Q Consensus       536 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~  594 (650)
                          ...........       ............++.+++.+||+.||++|||+.||++
T Consensus       248 ----~~i~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 ----SNIIRGIFSLD-------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ----HHHHHTCCCCC-------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----HHHhcCCCCcc-------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                11111110000       0000112233456778888999999999999999985


No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=5.1e-37  Score=343.97  Aligned_cols=259  Identities=24%  Similarity=0.321  Sum_probs=194.9

Q ss_pred             ccCCCcCCcccccCceeEEEeecc-CCcceeEeecccc-CchhHHHHHHHHHHHhhCCCCceeeecceeec------CCe
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE------ETE  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~  394 (650)
                      .++|++.++||+|+||.||++... +|+.||||++... .......+.+|+.++++++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            368999999999999999999864 5889999998765 33345578999999999999999999998765      667


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCC---eEEeeee
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMI---PKISDFG  471 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFG  471 (650)
                      .++||||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            8999999999999999986444456999999999999999999999987   999999999999997765   9999999


Q ss_pred             cccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHh-----
Q 006317          472 MARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKN-----  546 (650)
Q Consensus       472 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~-----  546 (650)
                      ++.......   ......||..|+|||++.+..++.++||||||+++|||++|+.||.....     ...|....     
T Consensus       170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~  241 (676)
T 3qa8_A          170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSN  241 (676)
T ss_dssp             CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC----
T ss_pred             ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccc
Confidence            998664322   23346789999999999999999999999999999999999999863210     00000000     


Q ss_pred             ---ccCCCccc--ccCccC---CCCChHHHHHHHHHHhcccccCCCCCCCHHHH
Q 006317          547 ---WNEGTALN--LIDPTL---RNGSSSEIMRCVHIGLLCVQENVANRPTMASV  592 (650)
Q Consensus       547 ---~~~~~~~~--~id~~l---~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~ev  592 (650)
                         ........  .+...+   ..........+.+++..||+.||++|||+.|+
T Consensus       242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence               00000000  000111   11122334566788889999999999999763


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=8.2e-36  Score=342.17  Aligned_cols=236  Identities=18%  Similarity=0.285  Sum_probs=188.3

Q ss_pred             ccCCCcCCcccccCceeEEEeecc--CCcceeEeeccccC-chhHHHHHHHHHHHhhCCCCceeeecceeecCCe-----
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEETE-----  394 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~--~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  394 (650)
                      .++|++.++||+|+||.||+++..  +|+.||||++.... ......+.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            478999999999999999999865  58899999986543 2344568899999999999999999999987655     


Q ss_pred             eEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          395 RLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       395 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      .+|||||+++++|.+++.     ..+++..++.++.||+.||.|||+++   |+||||||+||||+++ .+||+|||+++
T Consensus       159 ~~lv~E~~~g~~L~~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             EEEEEECCCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eEEEEEeCCCCcHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccch
Confidence            699999999999998764     26999999999999999999999987   9999999999999986 99999999998


Q ss_pred             ccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCccc
Q 006317          475 LFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALN  554 (650)
Q Consensus       475 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  554 (650)
                      .....      ....||+.|+|||++.++. +.++|||||||++|||++|..|+.......                   
T Consensus       230 ~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------------------  283 (681)
T 2pzi_A          230 RINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-------------------  283 (681)
T ss_dssp             ETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-------------------
T ss_pred             hcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-------------------
Confidence            65422      3457999999999987754 899999999999999999987764211000                   


Q ss_pred             ccCccCCCC-ChHHHHHHHHHHhcccccCCCCCCC-HHHHHHHhc
Q 006317          555 LIDPTLRNG-SSSEIMRCVHIGLLCVQENVANRPT-MASVVVMLN  597 (650)
Q Consensus       555 ~id~~l~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt-~~evl~~L~  597 (650)
                       +   .... .......+.+++.+||+.||++||+ ++++.+.|.
T Consensus       284 -~---~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          284 -L---PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             -C---CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             -c---cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence             0   0000 0111245667888999999999995 555655554


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.2e-35  Score=301.33  Aligned_cols=227  Identities=10%  Similarity=0.055  Sum_probs=177.7

Q ss_pred             cCCCcCCcccccCceeEEEeeccC-CcceeEeeccccCch---hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEEE
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLIY  399 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  399 (650)
                      ++|++.+.||+|+||.||+++... ++.||||++......   ....+.+|+..+.+++||||+++++++.+.+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            678999999999999999998754 899999999765332   2357899999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccC
Q 006317          400 EFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMD  479 (650)
Q Consensus       400 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~  479 (650)
                      ||+++++|.+++..     .....++.+++.||+.||+|||+++   |+||||||+||||++++.+||+++|        
T Consensus       111 e~~~g~~L~~~l~~-----~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADT-----SPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------  174 (286)
T ss_dssp             ECCCEEEHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred             EecCCCCHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence            99999999999842     2456678999999999999999997   9999999999999999999997443        


Q ss_pred             CCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCc-
Q 006317          480 QSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDP-  558 (650)
Q Consensus       480 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~-  558 (650)
                                    |++|       ++.++||||||+++|||+||+.||............   ...... .   ...+ 
T Consensus       175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~-~---~~~~~  226 (286)
T 3uqc_A          175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTAG-Q---PIEPA  226 (286)
T ss_dssp             --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTTS-C---BCCHH
T ss_pred             --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhcc-C---CCChh
Confidence                          3433       688999999999999999999998743322110000   000000 0   0000 


Q ss_pred             cCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHHHHhcC
Q 006317          559 TLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVVVMLNS  598 (650)
Q Consensus       559 ~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~L~~  598 (650)
                      .+....+.   .+.+++.+||+.||++| |+.|+++.|+.
T Consensus       227 ~~~~~~~~---~l~~li~~~l~~dP~~R-s~~el~~~L~~  262 (286)
T 3uqc_A          227 DIDRDIPF---QISAVAARSVQGDGGIR-SASTLLNLMQQ  262 (286)
T ss_dssp             HHCTTSCH---HHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred             hcccCCCH---HHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence            01111222   35567789999999999 99999999976


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=3.6e-36  Score=324.65  Aligned_cols=243  Identities=15%  Similarity=0.124  Sum_probs=178.1

Q ss_pred             hhccCCCcCCcccccCceeEEEeec-cCCcceeEeeccccCch---hHHHHHHHHHHHhhCCC-Cceeeecc--------
Q 006317          321 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQH-RNLVRLLG--------  387 (650)
Q Consensus       321 ~~~~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H-~niv~l~g--------  387 (650)
                      ..+..|...++||+|+||.||+|+. .+|+.||||++......   ....+.+|+.++..++| +|......        
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence            3445678889999999999999994 56899999998743322   34578999999999987 32211111        


Q ss_pred             -------------eeec-----CCeeEEEEecCCCCChhHHHHhh----hccCCCCHHHHHHHHHHHHHHHHHhhhcCCC
Q 006317          388 -------------FSFE-----ETERLLIYEFVPNSSVDKFIFDA----IKRVQLDWETRYKIIGGIARGILYLHEDSRL  445 (650)
Q Consensus       388 -------------~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~  445 (650)
                                   +...     ....+++|+++ +++|.+++...    .....+++..++.++.||++||+|||+++  
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--  231 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--  231 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence                         1111     12356677765 68999988532    12445888999999999999999999987  


Q ss_pred             cEEecCCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhcc----------ccCCCCccccccchh
Q 006317          446 RIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYV----------TRGHFSIKSDVFSFG  515 (650)
Q Consensus       446 ~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~~sDV~S~G  515 (650)
                       |+||||||+||||+.++.+||+|||+++.....     .....| +.|+|||++          ....++.++||||||
T Consensus       232 -iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG  304 (413)
T 3dzo_A          232 -LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG  304 (413)
T ss_dssp             -EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred             -cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence             999999999999999999999999998764422     334567 999999999          555688999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcccccCccCCCCChHHHHHHHHHHhcccccCCCCCCCHHHHH
Q 006317          516 VLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSEIMRCVHIGLLCVQENVANRPTMASVV  593 (650)
Q Consensus       516 vll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~evl  593 (650)
                      |++|||++|+.||.........               ..++.. . ...++   .+.+++..||+.||++||++.+++
T Consensus       305 vil~elltg~~Pf~~~~~~~~~---------------~~~~~~-~-~~~~~---~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          305 LAIYWIWCADLPNTDDAALGGS---------------EWIFRS-C-KNIPQ---PVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHHHHHHSSCCCCTTGGGSCS---------------GGGGSS-C-CCCCH---HHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHHHHHHCCCCCCCcchhhhH---------------HHHHhh-c-ccCCH---HHHHHHHHHccCChhhCcCHHHHH
Confidence            9999999999998643221110               011110 0 11223   455677799999999999977765


No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.3e-34  Score=298.70  Aligned_cols=227  Identities=20%  Similarity=0.220  Sum_probs=174.1

Q ss_pred             cCCCcC-CcccccCceeEEEeec-cCCcceeEeeccccCchhHHHHHHHHHHH-hhCCCCceeeecceeec----CCeeE
Q 006317          324 NNFSTD-NKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLV-ARLQHRNLVRLLGFSFE----ETERL  396 (650)
Q Consensus       324 ~~f~~~-~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~  396 (650)
                      ++|... +.||+|+||.||++.. .+++.||||++...     ..+.+|+.++ +.++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            456666 7899999999999986 45889999998642     3567788887 66699999999999876    66789


Q ss_pred             EEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC---CCCeEEeeeecc
Q 006317          397 LIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA---DMIPKISDFGMA  473 (650)
Q Consensus       397 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGla  473 (650)
                      +||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.   ++.+||+|||++
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            999999999999999753 2346999999999999999999999987   999999999999998   789999999998


Q ss_pred             cccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCCCCCCcccchhHHHHHHhccCCCcc
Q 006317          474 RLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL  553 (650)
Q Consensus       474 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  553 (650)
                      ....                        +..++.++||||||+++|||++|+.||........       .     ....
T Consensus       168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------~-----~~~~  211 (299)
T 3m2w_A          168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------S-----PGMK  211 (299)
T ss_dssp             EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSC
T ss_pred             cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------h-----HHHH
Confidence            6432                        23457899999999999999999999863221110       0     0000


Q ss_pred             cccCccCCCCCh----HHHHHHHHHHhcccccCCCCCCCHHHHHHH
Q 006317          554 NLIDPTLRNGSS----SEIMRCVHIGLLCVQENVANRPTMASVVVM  595 (650)
Q Consensus       554 ~~id~~l~~~~~----~~~~~~~~l~~~Cl~~~p~~RPt~~evl~~  595 (650)
                      ..+.........    .....+.+++.+||+.||++|||+.|+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            000000000010    112345677789999999999999999864


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=6.2e-35  Score=306.26  Aligned_cols=191  Identities=17%  Similarity=0.175  Sum_probs=158.5

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCc--------hhHHHHHHHHHHHhhCC---------CCceeee
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQ---------HRNLVRL  385 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---------H~niv~l  385 (650)
                      .++|+..++||+|+||.||+++. +|+.||||++.....        .....+.+|+.++++++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            36788899999999999999998 689999999976532        22357889999998886         5555554


Q ss_pred             -----------------cceeec-------------CCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHH
Q 006317          386 -----------------LGFSFE-------------ETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARG  435 (650)
Q Consensus       386 -----------------~g~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~  435 (650)
                                       ++++.+             ....++||||+++|++.+.+.    +..+++..++.++.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHHHH
Confidence                             444443             678999999999997666553    2568999999999999999


Q ss_pred             HHHhh-hcCCCcEEecCCCCCceEeCCCC--------------------CeEEeeeecccccccCCCCCccceeecCccc
Q 006317          436 ILYLH-EDSRLRIIHRDLKASNILLDADM--------------------IPKISDFGMARLFEMDQSQGDTSRIVGTFGY  494 (650)
Q Consensus       436 L~yLH-~~~~~~iiHrDlk~~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y  494 (650)
                      |+||| +.+   |+||||||+||||+.++                    .+||+|||+++....       ....||+.|
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y  243 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCT
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecc
Confidence            99999 887   99999999999999887                    899999999987642       235899999


Q ss_pred             cChhccccCCCCccccccchhHH-HHHHHhCCCCCC
Q 006317          495 MAPEYVTRGHFSIKSDVFSFGVL-VLEIISGQKNNS  529 (650)
Q Consensus       495 ~aPE~~~~~~~s~~sDV~S~Gvl-l~elltG~~p~~  529 (650)
                      +|||++.+.. +.++||||++++ .+++++|..|+.
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~  278 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS  278 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence            9999998766 899999998766 788899988863


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95  E-value=4.1e-29  Score=279.22  Aligned_cols=184  Identities=18%  Similarity=0.212  Sum_probs=130.3

Q ss_pred             cccccCceeEEEee-ccCCcceeEeeccccCc----------hhHHHHHHHHHHHhhC-CCCceeeecceeecCCeeEEE
Q 006317          331 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV----------QGELEFKNEVLLVARL-QHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       331 ~LG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----------~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ..+.|++|.+..++ .--|+.++||.+.+...          ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45667777666654 33488999999975421          1234699999999999 799999999999999999999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||++|++|.++|..   .+.++..   +|+.||+.||+|||+++   ||||||||+||||++++++||+|||+++....
T Consensus       321 MEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            999999999999973   4567654   58899999999999998   99999999999999999999999999987653


Q ss_pred             CCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCC
Q 006317          479 DQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQK  526 (650)
Q Consensus       479 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~  526 (650)
                      ..  ......+||+.|||||++.+ .+..++|+||+|+++++|.++..
T Consensus       392 ~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          392 DC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             CC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence            32  23445689999999999875 46778999999999888766543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=7e-27  Score=259.67  Aligned_cols=185  Identities=16%  Similarity=0.235  Sum_probs=145.9

Q ss_pred             CcCCcccccCceeEEEeeccCCcceeEeeccccCch--------hHHHHHHHHHHHhhCCCCceeeecceeecCCeeEEE
Q 006317          327 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ--------GELEFKNEVLLVARLQHRNLVRLLGFSFEETERLLI  398 (650)
Q Consensus       327 ~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  398 (650)
                      ...++||+|+||.||++.. .++.+++|+.......        ..+.+.+|++++++++||||+++..++...+..+||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            4567999999999999955 5788899886443211        123478999999999999999877777788888999


Q ss_pred             EecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeeccccccc
Q 006317          399 YEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEM  478 (650)
Q Consensus       399 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~  478 (650)
                      |||+++++|.+++..           +..++.||++||+|||+++   |+||||||+|||+++  ++||+|||+++....
T Consensus       418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            999999999999863           5689999999999999987   999999999999999  999999999987653


Q ss_pred             CCCCC-----ccceeecCccccChhcccc--CCCCccccccchhHHHHHHHhCCCCC
Q 006317          479 DQSQG-----DTSRIVGTFGYMAPEYVTR--GHFSIKSDVFSFGVLVLEIISGQKNN  528 (650)
Q Consensus       479 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~s~~sDV~S~Gvll~elltG~~p~  528 (650)
                      .....     ......||+.|||||++..  ..|+...|+|+..+-.++.+.++.++
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            22111     1235689999999999987  56788899999999999988887654


No 253
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}
Probab=99.92  E-value=1.9e-25  Score=191.34  Aligned_cols=99  Identities=25%  Similarity=0.459  Sum_probs=90.3

Q ss_pred             CCCCCCCccCCCChHHHHHHHHHHHhHhhhcC-CCCceeeecCC-CCCceEEEEeccCCCChhhhHHHHHHHHHHHHhcC
Q 006317           12 QTCYDTGNFTTNSTYGKNRDLFLSSLASTVTA-NKGFYTATIGQ-IPDEVYGLALCRGDSSPESCASCLNFTVLDMMKNC   89 (650)
Q Consensus        12 ~~C~~~~~~~~~s~y~~nl~~ll~~l~~~~~~-~~~f~~~~~g~-~~~~vyg~~~C~~D~~~~~C~~Cl~~a~~~~~~~C   89 (650)
                      +.|+ +++|+++++|++||+.||+.|+++++. +.+|+++..|. ++++|||++|||||+++++|..||+.|+.++.+.|
T Consensus         8 ~~Cn-~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~C   86 (108)
T 3a2e_A            8 SACN-TQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSIC   86 (108)
T ss_dssp             EEEC-SSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHT
T ss_pred             eecC-CCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHC
Confidence            5797 589999999999999999999998854 45677776664 56999999999999999999999999999999999


Q ss_pred             CCcccceEecCCCcceEEEecCccc
Q 006317           90 PNQKEAISWEGMDFPCVVRYSSRSF  114 (650)
Q Consensus        90 ~~~~~a~~~~~~~~~C~~ry~~~~f  114 (650)
                      +++++|+||++   .|+||||+++|
T Consensus        87 ~~~~g~~i~~~---~C~lRY~~~~F  108 (108)
T 3a2e_A           87 NNAIGARVQLV---DCFIQYEQRSF  108 (108)
T ss_dssp             TSBSSEEEEET---TEEEEEESSCC
T ss_pred             CCCceEEEECC---CEEEEEeCCcC
Confidence            99999999999   99999999998


No 254
>2e79_A Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lectin, plant protein, sugar binding protein; 2.38A {Ginkgo biloba} PDB: 3a2e_A
Probab=99.92  E-value=5.2e-25  Score=188.96  Aligned_cols=99  Identities=24%  Similarity=0.446  Sum_probs=92.3

Q ss_pred             CCCCCCCccCCCChHHHHHHHHHHHhHhhhcCC-CCceeeecCCCC-CceEEEEeccCCCChhhhHHHHHHHHHHHHhcC
Q 006317           12 QTCYDTGNFTTNSTYGKNRDLFLSSLASTVTAN-KGFYTATIGQIP-DEVYGLALCRGDSSPESCASCLNFTVLDMMKNC   89 (650)
Q Consensus        12 ~~C~~~~~~~~~s~y~~nl~~ll~~l~~~~~~~-~~f~~~~~g~~~-~~vyg~~~C~~D~~~~~C~~Cl~~a~~~~~~~C   89 (650)
                      +.|++ ++|+++++|++||+.||+.|+++++.+ .+|+++++|.++ ++|||++|||||+++++|..||+.|+.++.+.|
T Consensus         8 ~~C~~-~~~~~~s~f~~nl~~ll~~L~~~a~~~~~~f~~~~~g~~~~~~vYgl~qC~~Dls~~~C~~Cl~~a~~~~~~~C   86 (108)
T 2e79_A            8 SACNT-QKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSIC   86 (108)
T ss_dssp             EEECS-SBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCCTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHT
T ss_pred             eeCCC-CeeCCcchHHHHHHHHHHHHHHHhhcCCcccEEEecCCCCCCcEEEEEecCCCCChHHHHHHHHHHHHHHHHhC
Confidence            68986 899999999999999999999988543 479999888776 899999999999999999999999999999999


Q ss_pred             CCcccceEecCCCcceEEEecCccc
Q 006317           90 PNQKEAISWEGMDFPCVVRYSSRSF  114 (650)
Q Consensus        90 ~~~~~a~~~~~~~~~C~~ry~~~~f  114 (650)
                      +++++|+||++   .|++|||+++|
T Consensus        87 ~~~~g~~i~~~---~C~lRy~~~~F  108 (108)
T 2e79_A           87 NNAIGARVQLV---DCFIQYEQRSF  108 (108)
T ss_dssp             TSBSSEEEEES---SEEEEEESSCC
T ss_pred             CCCceEEEECC---CeEEEEeCCCC
Confidence            99999999999   99999999998


No 255
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}
Probab=99.88  E-value=4.1e-23  Score=176.84  Aligned_cols=103  Identities=25%  Similarity=0.453  Sum_probs=92.4

Q ss_pred             eeEEeeccccCCChHHHHHHHHHHHHHHHHHhccCCCccceeeeeeccCCCcceeEEeecccCCCccchhhHHHHhHhhh
Q 006317          123 TEIAHNVNNITSSLTQFDRIWRSLMDRVLAKASLGTSKLKFATDEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADV  202 (650)
Q Consensus       123 ~~~~~~~~~~~~~~~~f~~~~~~l~~~l~~~a~~~~~~~~fa~~~~~~~~~~~vy~laQC~~Dl~~~~C~~CL~~~~~~~  202 (650)
                      ....|+..+++ +++.|+.+++.||..|...|+.+  ..+|+++..+..+.++||||+||+|||++++|+.||+.|+.++
T Consensus         6 v~~~Cn~~~~t-~~s~f~~nl~~ll~~L~~~a~~s--~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            6 VSSACNTQKIP-SGSPFNRNLRAMLADLRQNTAFS--GYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             EEEEECSSBCC-TTCTHHHHHHHHHHHHHHHGGGT--TSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             eeeecCCCccC-CCChHHHHHHHHHHHHHhhCccc--cCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            45678888887 67899999999999999988765  3578887776666789999999999999999999999999999


Q ss_pred             hhccCCCcceEEeCcccccccccCcc
Q 006317          203 QSCCYGKKGSYIMGPSCIFRWEMYPF  228 (650)
Q Consensus       203 ~~~c~~~~g~~~~~~~C~lry~~~~f  228 (650)
                      +++|++++||+||+++|+||||.++|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999987


No 256
>2e79_A Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lectin, plant protein, sugar binding protein; 2.38A {Ginkgo biloba} PDB: 3a2e_A
Probab=99.88  E-value=5.8e-23  Score=176.16  Aligned_cols=106  Identities=25%  Similarity=0.423  Sum_probs=93.7

Q ss_pred             CCCeeEEeeccccCCChHHHHHHHHHHHHHHHHHhccCCCccceeeeeeccCCCcceeEEeecccCCCccchhhHHHHhH
Q 006317          120 LKPTEIAHNVNNITSSLTQFDRIWRSLMDRVLAKASLGTSKLKFATDEANLTSSETIYALMQCTPDISQSDCEFCLRQSM  199 (650)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~f~~~~~~l~~~l~~~a~~~~~~~~fa~~~~~~~~~~~vy~laQC~~Dl~~~~C~~CL~~~~  199 (650)
                      +++.+..|+..+++ +++.|+.+++.||+.|...|+.+  ..+|+++..+.++.++||||+||+|||++++|+.||..++
T Consensus         3 t~~~~~~C~~~~~~-~~s~f~~nl~~ll~~L~~~a~~~--~~~f~~~~~g~~~~~~vYgl~qC~~Dls~~~C~~Cl~~a~   79 (108)
T 2e79_A            3 TAFVSSACNTQKIP-SGSPFNRNLRAMLADLRQNTAFS--GYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLV   79 (108)
T ss_dssp             CCEEEEEECSSBCC-TTCTHHHHHHHHHHHHHHHGGGT--TSEEEEEECCCTTCCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred             ceeeeeeCCCCeeC-CcchHHHHHHHHHHHHHHHhhcC--CcccEEEecCCCCCCcEEEEEecCCCCChHHHHHHHHHHH
Confidence            45567788887776 67899999999999999988754  2578888766555579999999999999999999999999


Q ss_pred             hhhhhccCCCcceEEeCcccccccccCcc
Q 006317          200 ADVQSCCYGKKGSYIMGPSCIFRWEMYPF  228 (650)
Q Consensus       200 ~~~~~~c~~~~g~~~~~~~C~lry~~~~f  228 (650)
                      .+++++|+++.||+||+++|+||||.++|
T Consensus        80 ~~~~~~C~~~~g~~i~~~~C~lRy~~~~F  108 (108)
T 2e79_A           80 NRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             TTHHHHTTSBSSEEEEESSEEEEEESSCC
T ss_pred             HHHHHhCCCCceEEEECCCeEEEEeCCCC
Confidence            99999999999999999999999999887


No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88  E-value=3.1e-23  Score=211.38  Aligned_cols=150  Identities=17%  Similarity=0.107  Sum_probs=120.7

Q ss_pred             HhhccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCc------------------hhHHHHHHHHHHHhhCCCCc
Q 006317          320 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV------------------QGELEFKNEVLLVARLQHRN  381 (650)
Q Consensus       320 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~H~n  381 (650)
                      ......|...+.||+|+||.||+|+..+|+.||||+++....                  .....+.+|+.++++++  |
T Consensus        86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~  163 (282)
T 1zar_A           86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G  163 (282)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred             HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence            334455667799999999999999997799999999964321                  12446889999999999  5


Q ss_pred             eeeecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCC
Q 006317          382 LVRLLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDA  461 (650)
Q Consensus       382 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~  461 (650)
                       +++.+++.. +..++||||+++++|.+ +.         ......++.||+.||.|||+.+   |+||||||+||||+ 
T Consensus       164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~---------~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-  227 (282)
T 1zar_A          164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VR---------VENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-  227 (282)
T ss_dssp             -SSSCCEEEE-ETTEEEEECCCCEEGGG-CC---------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-
T ss_pred             -CCcCeEEec-cceEEEEEecCCCcHHH-cc---------hhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-
Confidence             777775543 56699999999999987 42         1234579999999999999987   99999999999999 


Q ss_pred             CCCeEEeeeecccccccCCCCCccceeecCccccChhcccc
Q 006317          462 DMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTR  502 (650)
Q Consensus       462 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  502 (650)
                      ++.+||+|||+++.               +..++|||++..
T Consensus       228 ~~~vkl~DFG~a~~---------------~~~~~a~e~l~r  253 (282)
T 1zar_A          228 EEGIWIIDFPQSVE---------------VGEEGWREILER  253 (282)
T ss_dssp             TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred             CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence            99999999999863               335789998753


No 258
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76  E-value=4.6e-19  Score=178.19  Aligned_cols=136  Identities=17%  Similarity=0.190  Sum_probs=105.5

Q ss_pred             CCcCCcccccCceeEEEeec-cCCcc--eeEeeccccCch------------------------hHHHHHHHHHHHhhCC
Q 006317          326 FSTDNKLGQGGFGAVYKGRL-SHGQE--IAVKRLSKNSVQ------------------------GELEFKNEVLLVARLQ  378 (650)
Q Consensus       326 f~~~~~LG~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  378 (650)
                      |.+.+.||+|+||.||+|.. .+|+.  ||||+++.....                        ....+.+|+..+.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999997 67888  999987543111                        1135788999999998


Q ss_pred             CCce--eeecceeecCCeeEEEEecCCC-C----ChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhh-hcCCCcEEec
Q 006317          379 HRNL--VRLLGFSFEETERLLIYEFVPN-S----SVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLH-EDSRLRIIHR  450 (650)
Q Consensus       379 H~ni--v~l~g~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiHr  450 (650)
                      |+++  ..++.+    ...+|||||+.+ |    +|.+++..      .++..+..++.||+.+|.||| +.+   |+||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr  195 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LVHA  195 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence            8864  333322    356899999942 4    66655431      234567889999999999999 877   9999


Q ss_pred             CCCCCceEeCCCCCeEEeeeeccccc
Q 006317          451 DLKASNILLDADMIPKISDFGMARLF  476 (650)
Q Consensus       451 Dlk~~NILl~~~~~~kl~DFGla~~~  476 (650)
                      ||||.|||+++  .++|+|||++...
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999998  9999999999753


No 259
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63  E-value=1.1e-16  Score=167.52  Aligned_cols=138  Identities=16%  Similarity=0.189  Sum_probs=96.9

Q ss_pred             CCCcCCcccccCceeEEEeeccCCcceeEeeccccCc--------------hhHHHHHHHHHHHhhCCCCceeeecceee
Q 006317          325 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------------QGELEFKNEVLLVARLQHRNLVRLLGFSF  390 (650)
Q Consensus       325 ~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~g~~~  390 (650)
                      -|.+.+.||+|+||.||+|...+|+.||||+++....              ........++++.....|+|+++++....
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4888999999999999999998999999998753210              01112222333333334444444432211


Q ss_pred             ------cCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCC-
Q 006317          391 ------EETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADM-  463 (650)
Q Consensus       391 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-  463 (650)
                            .....+|||||+++++|.++..         ......++.||+.+|.|||+.+   ||||||||.||||++++ 
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence                  1123479999999988765431         1234567899999999999987   99999999999998877 


Q ss_pred             ---------CeEEeeeeccc
Q 006317          464 ---------IPKISDFGMAR  474 (650)
Q Consensus       464 ---------~~kl~DFGla~  474 (650)
                               .+.|+||+-+.
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCE
T ss_pred             cccccccccceEEEEeCCcc
Confidence                     38899998664


No 260
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25  E-value=1.4e-11  Score=123.58  Aligned_cols=143  Identities=17%  Similarity=0.133  Sum_probs=111.6

Q ss_pred             ccCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCceeeecceeecCCeeEEEEec
Q 006317          323 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       323 ~~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e~  401 (650)
                      -.+|.....++.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. |.++.+++++....+..++||||
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            356777788888999999999764 6889999986532222335888999999884 67788999999888899999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED---------------------------------------  442 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~---------------------------------------  442 (650)
                      ++|.+|.+.+.        +......++.+++++|..||+.                                       
T Consensus        92 i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           92 ADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             CSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             cCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            99999876531        1122347788999999999981                                       


Q ss_pred             -----------------CCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          443 -----------------SRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       443 -----------------~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                                       ....++|+|+++.|||++++..+.|.||+.+.
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                             11459999999999999876667799998764


No 261
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.14  E-value=5e-11  Score=118.98  Aligned_cols=137  Identities=17%  Similarity=0.129  Sum_probs=100.0

Q ss_pred             cCCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCc--eeeecceeecCCeeEEEEec
Q 006317          324 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN--LVRLLGFSFEETERLLIYEF  401 (650)
Q Consensus       324 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~e~  401 (650)
                      .++....+.+.|..+.||+....+|..+++|+.....   ...+.+|+.+++.+.+.+  +.+++++...++..++||||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            3444433334566699999987778889999976542   235678999998886544  45688888877788999999


Q ss_pred             CCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006317          402 VPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDS--------------------------------------  443 (650)
Q Consensus       402 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------  443 (650)
                      +++.+|.  ..      ..+   ...++.++++.|..||+..                                      
T Consensus        97 i~G~~l~--~~------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           97 VPGQDLL--SS------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             CSSEETT--TS------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             cCCcccC--cC------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            9998874  21      011   2256677777788887642                                      


Q ss_pred             -----------------CCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          444 -----------------RLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       444 -----------------~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                                       ...++|+|++|.|||+++++.+.|.||+.+.
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                             1239999999999999887667899999874


No 262
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96  E-value=1.6e-09  Score=113.71  Aligned_cols=141  Identities=16%  Similarity=0.223  Sum_probs=106.5

Q ss_pred             CCcccccCceeEEEeeccCCcceeEeecc--ccC-chhHHHHHHHHHHHhhCC--CCceeeecceeecC---CeeEEEEe
Q 006317          329 DNKLGQGGFGAVYKGRLSHGQEIAVKRLS--KNS-VQGELEFKNEVLLVARLQ--HRNLVRLLGFSFEE---TERLLIYE  400 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~e  400 (650)
                      .+.|+.|.++.||+.... +..+++|+..  ... ......+.+|+.+++.+.  +..+.+++.++.+.   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            467899999999998875 4678888876  332 123346788999999987  45578888888766   45899999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDS-------------------------------------  443 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------  443 (650)
                      |+++..+.+..     ...++..++..++.++++.|..||+..                                     
T Consensus       122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            99998875421     234778888999999999999999731                                     


Q ss_pred             ------------------CCcEEecCCCCCceEeCCCCC--eEEeeeecccc
Q 006317          444 ------------------RLRIIHRDLKASNILLDADMI--PKISDFGMARL  475 (650)
Q Consensus       444 ------------------~~~iiHrDlk~~NILl~~~~~--~kl~DFGla~~  475 (650)
                                        ...++|+|+++.|||++.++.  +.|.||+.+..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                              256999999999999998753  68999998864


No 263
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88  E-value=1.4e-09  Score=111.51  Aligned_cols=187  Identities=18%  Similarity=0.253  Sum_probs=120.9

Q ss_pred             CCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCc--eeeecceeecCC---eeEEEEecC
Q 006317          329 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRN--LVRLLGFSFEET---ERLLIYEFV  402 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~e~~  402 (650)
                      .+.++.|....||+..    ..+++|+....  .....+.+|..+++.+. +..  +.+++......+   ..++|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999864    56889986432  33456889999998874 333  334444333332   347899999


Q ss_pred             CCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc----------------------------------------
Q 006317          403 PNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED----------------------------------------  442 (650)
Q Consensus       403 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------------------  442 (650)
                      +|.+|.+...     ..++..++..++.++++.|..||+.                                        
T Consensus        99 ~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           99 KGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             CCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9998875432     2467777888888888888888861                                        


Q ss_pred             ---------------CCCcEEecCCCCCceEeCC--CCCeEEeeeecccccccCCCCCcc------------ceeecCcc
Q 006317          443 ---------------SRLRIIHRDLKASNILLDA--DMIPKISDFGMARLFEMDQSQGDT------------SRIVGTFG  493 (650)
Q Consensus       443 ---------------~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~------------~~~~gt~~  493 (650)
                                     ..+.++|+|+++.||++++  ...+.|.||+.+..-.....-...            .......+
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~  253 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK  253 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence                           1245899999999999998  456789999988643211000000            00000001


Q ss_pred             ccC-hhccccCCCCccccccchhHHHHHHHhCCCCC
Q 006317          494 YMA-PEYVTRGHFSIKSDVFSFGVLVLEIISGQKNN  528 (650)
Q Consensus       494 y~a-PE~~~~~~~s~~sDV~S~Gvll~elltG~~p~  528 (650)
                      ... |+....  .....+.|+++.++|++.+|..++
T Consensus       254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            111 222111  112368999999999999998653


No 264
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58  E-value=2.9e-07  Score=94.84  Aligned_cols=136  Identities=15%  Similarity=0.205  Sum_probs=100.2

Q ss_pred             CCCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCC----CceeeecceeecCCeeEEEEe
Q 006317          325 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH----RNLVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       325 ~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~~~~~~~lv~e  400 (650)
                      .....+.++.|....||+.    |..+++|+....  .....+.+|..++..+.+    ..+.+++++    +..++|||
T Consensus        38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme  107 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK  107 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred             ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence            4555678999999999987    678999976432  223457889998888866    123444444    56789999


Q ss_pred             cCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------
Q 006317          401 FVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDS-------------------------------------  443 (650)
Q Consensus       401 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------  443 (650)
                      |+++.++.....     ..++..++..++.++++.|..||+..                                     
T Consensus       108 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (320)
T 3r70_A          108 YIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT  182 (320)
T ss_dssp             CCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence            999998874332     23566677777778888888777432                                     


Q ss_pred             -----------------------CCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          444 -----------------------RLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       444 -----------------------~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                                             .+.++|+|++|.|||++++..+.|.||+.+..
T Consensus       183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence                                   23469999999999999976679999998864


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51  E-value=5.8e-07  Score=91.04  Aligned_cols=77  Identities=21%  Similarity=0.288  Sum_probs=60.5

Q ss_pred             cCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCC---ceeeecceeecCCeeEEEEecCCC
Q 006317          328 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR---NLVRLLGFSFEETERLLIYEFVPN  404 (650)
Q Consensus       328 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~e~~~~  404 (650)
                      ..+.|+.|.++.||+....+|+.++||+...........+..|+..|+.+++.   .+.+++++.    ..++||||+++
T Consensus        19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g   94 (288)
T 3d1u_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence            35789999999999999888999999997543322334689999999999875   466777653    46999999999


Q ss_pred             CChh
Q 006317          405 SSVD  408 (650)
Q Consensus       405 gsL~  408 (650)
                      +++.
T Consensus        95 ~~~~   98 (288)
T 3d1u_A           95 RPPT   98 (288)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8753


No 266
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.40  E-value=2e-06  Score=87.96  Aligned_cols=136  Identities=19%  Similarity=0.163  Sum_probs=92.2

Q ss_pred             CCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCC---ceeeecceee-cCCeeEEEEecCCC
Q 006317          329 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR---NLVRLLGFSF-EETERLLIYEFVPN  404 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~e~~~~  404 (650)
                      .+.++.|....||+.    |..++||+-..  ......+.+|..+|..+.+.   .+.+.+.+.. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            356788888899987    67889998532  23345688999999998753   3455666653 34567899999999


Q ss_pred             CChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 006317          405 SSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED------------------------------------------  442 (650)
Q Consensus       405 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------  442 (650)
                      .+|.....     ..++..+...++.++++.|..||+.                                          
T Consensus        98 ~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           98 QILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             EECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             eECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            88876321     1233444444444444444444432                                          


Q ss_pred             ---------------CCCcEEecCCCCCceEeCC---CCC-eEEeeeecccc
Q 006317          443 ---------------SRLRIIHRDLKASNILLDA---DMI-PKISDFGMARL  475 (650)
Q Consensus       443 ---------------~~~~iiHrDlk~~NILl~~---~~~-~kl~DFGla~~  475 (650)
                                     ..+.++|+|+++.|||++.   ++. +.|.||+.+..
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                           2345799999999999998   455 48999998753


No 267
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34  E-value=2e-06  Score=86.03  Aligned_cols=134  Identities=16%  Similarity=0.186  Sum_probs=95.4

Q ss_pred             cccccCce-eEEEeecc-CCcceeEeeccccCchhHHHHHHHHHHHhhCC-CCceeeecceeecCCeeEEEEecCCCCCh
Q 006317          331 KLGQGGFG-AVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEETERLLIYEFVPNSSV  407 (650)
Q Consensus       331 ~LG~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e~~~~gsL  407 (650)
                      .+..|..| .||+.... ++..++||+-...   ...++.+|...|+.+. +-.+.++++++.+.+..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            44455555 68987654 4567899986433   3446788999988874 33467788888888999999999999888


Q ss_pred             hHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------------
Q 006317          408 DKFIFDAIKRVQLDWETRYKIIGGIARGILYLHED---------------------------------------------  442 (650)
Q Consensus       408 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~---------------------------------------------  442 (650)
                      .+....       .......+..+++..|.-||+.                                             
T Consensus       108 ~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          108 FQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             HHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             cccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            765432       1122334556666666666642                                             


Q ss_pred             ----------CCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          443 ----------SRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       443 ----------~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                                ..+.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                      12238999999999999988777899998874


No 268
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18  E-value=1.8e-06  Score=90.18  Aligned_cols=80  Identities=6%  Similarity=0.052  Sum_probs=55.3

Q ss_pred             CCcc-cccCceeEEEeecc-------CCcceeEeeccccC---chhHHHHHHHHHHHhhCCC---CceeeecceeecC--
Q 006317          329 DNKL-GQGGFGAVYKGRLS-------HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQH---RNLVRLLGFSFEE--  392 (650)
Q Consensus       329 ~~~L-G~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~--  392 (650)
                      .+.| +.|....+|+....       ++..+++|+.....   ......+.+|+.+++.+..   -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 88889999998764       26788999865432   1112356788888887742   3466777776654  


Q ss_pred             -CeeEEEEecCCCCChh
Q 006317          393 -TERLLIYEFVPNSSVD  408 (650)
Q Consensus       393 -~~~~lv~e~~~~gsL~  408 (650)
                       +..++||||+++..+.
T Consensus       105 ~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TSSCEEEEECCCCBCCC
T ss_pred             cCCceEEEEecCCCChh
Confidence             3568999999987654


No 269
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13  E-value=4.9e-06  Score=87.14  Aligned_cols=142  Identities=13%  Similarity=0.175  Sum_probs=89.6

Q ss_pred             cCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCc--eeeecceeecC-CeeEEEEecCCC
Q 006317          328 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN--LVRLLGFSFEE-TERLLIYEFVPN  404 (650)
Q Consensus       328 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~e~~~~  404 (650)
                      ..+.|+.|....+|+... ++..+++|+....     ..+..|..++..+....  +.+++.++... +..++||||+++
T Consensus        45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G  118 (362)
T 3ovc_A           45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG  118 (362)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred             eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence            346788999999999875 5788999987432     25788989998886543  45666666654 568999999998


Q ss_pred             CChhHH---------------H---Hhhh-cc-C------------CCCHHHHH---------------------HHHHH
Q 006317          405 SSVDKF---------------I---FDAI-KR-V------------QLDWETRY---------------------KIIGG  431 (650)
Q Consensus       405 gsL~~~---------------l---~~~~-~~-~------------~l~~~~~~---------------------~i~~~  431 (650)
                      .+|.+.               |   +... .. .            .-+|...+                     .....
T Consensus       119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  198 (362)
T 3ovc_A          119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA  198 (362)
T ss_dssp             EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence            665421               1   1100 00 0            00111110                     11112


Q ss_pred             HHHHHHHhhhc-CCCcEEecCCCCCceEeCCCCCeEEeeeecccc
Q 006317          432 IARGILYLHED-SRLRIIHRDLKASNILLDADMIPKISDFGMARL  475 (650)
Q Consensus       432 ia~~L~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~  475 (650)
                      +...++++... ..+.++|+|+++.|||+++++.+.|.||+.+..
T Consensus       199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence            22223333221 125689999999999998877788999998754


No 270
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.99  E-value=3.4e-05  Score=79.63  Aligned_cols=140  Identities=16%  Similarity=0.211  Sum_probs=80.1

Q ss_pred             CcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCC-----CCceeeec-c--eeecCCeeEEEEec
Q 006317          330 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----HRNLVRLL-G--FSFEETERLLIYEF  401 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lv~e~  401 (650)
                      +.|+.|..+.||+....+| .+++|+....    ...+..|..++..|.     .|.++... |  +....+..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            4566677889999887555 4899998652    123344555555442     24443321 1  12345678999999


Q ss_pred             CCCCChh-----H---------HHHhhhccC-----------CCCHHHHH------------------------------
Q 006317          402 VPNSSVD-----K---------FIFDAIKRV-----------QLDWETRY------------------------------  426 (650)
Q Consensus       402 ~~~gsL~-----~---------~l~~~~~~~-----------~l~~~~~~------------------------------  426 (650)
                      +++..+.     .         -++......           ...|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9987543     1         112111100           11332211                              


Q ss_pred             -HHHHHHHHHHHHhhh----------cCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          427 -KIIGGIARGILYLHE----------DSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       427 -~i~~~ia~~L~yLH~----------~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                       .+...+..++.+|++          .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence             111223445667763          124569999999999999888899999998764


No 271
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.91  E-value=6.1e-05  Score=75.96  Aligned_cols=78  Identities=21%  Similarity=0.287  Sum_probs=56.5

Q ss_pred             CCcCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCC---ceeeecceeecCCeeEEEEecC
Q 006317          326 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR---NLVRLLGFSFEETERLLIYEFV  402 (650)
Q Consensus       326 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~e~~  402 (650)
                      ....+.+|.|..+.||+.++.+|+.|+||+-..........|..|...|+.|.-.   .+.+++++    +..++||||+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence            4445788999999999999999999999987654433344578899988887422   23444443    2347899999


Q ss_pred             CCCCh
Q 006317          403 PNSSV  407 (650)
Q Consensus       403 ~~gsL  407 (650)
                      +.+..
T Consensus        93 ~~~~~   97 (288)
T 3f7w_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            87654


No 272
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82  E-value=5.2e-05  Score=80.32  Aligned_cols=75  Identities=12%  Similarity=0.113  Sum_probs=48.5

Q ss_pred             CCcccccCceeEEEeecc-CCcceeEeeccccCc-------hhHHHHHHHHHHHhhCCC--Cc-eeeecceeecCCeeEE
Q 006317          329 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-------QGELEFKNEVLLVARLQH--RN-LVRLLGFSFEETERLL  397 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~H--~n-iv~l~g~~~~~~~~~l  397 (650)
                      .+.||.|..+.||++... +++.++||.......       .....+..|.++++.+..  +. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            467899999999999764 467899998643211       112345678888887732  33 3345433  4455689


Q ss_pred             EEecCCCC
Q 006317          398 IYEFVPNS  405 (650)
Q Consensus       398 v~e~~~~g  405 (650)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764


No 273
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.70  E-value=0.00018  Score=73.28  Aligned_cols=139  Identities=18%  Similarity=0.160  Sum_probs=92.2

Q ss_pred             cCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCC---CCceeeecceeecCCeeEEEEecCCC
Q 006317          328 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEETERLLIYEFVPN  404 (650)
Q Consensus       328 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~e~~~~  404 (650)
                      ..+.|+.|....+|+... ++..++||+....   ....+..|...|+.|.   ...+.+++.+....+..++||||+++
T Consensus        40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            346789999999999886 4678889987543   2446788988888873   35678888888878889999999998


Q ss_pred             CChhH--------H---HHhhhccC-------------------CCCHHHHH---HHH----------------HHHHHH
Q 006317          405 SSVDK--------F---IFDAIKRV-------------------QLDWETRY---KII----------------GGIARG  435 (650)
Q Consensus       405 gsL~~--------~---l~~~~~~~-------------------~l~~~~~~---~i~----------------~~ia~~  435 (650)
                      ..+..        .   |+......                   .-+|....   ++.                ..+..-
T Consensus       116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~  195 (312)
T 3jr1_A          116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI  195 (312)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence            86521        1   22111100                   12454322   111                111111


Q ss_pred             -HHHhhh-cCCCcEEecCCCCCceEeCCCCCeEEeeee
Q 006317          436 -ILYLHE-DSRLRIIHRDLKASNILLDADMIPKISDFG  471 (650)
Q Consensus       436 -L~yLH~-~~~~~iiHrDlk~~NILl~~~~~~kl~DFG  471 (650)
                       ...|.. ...+.++|+|+.+.||+++.++ +.|.||.
T Consensus       196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence             223432 2356799999999999999887 8888873


No 274
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53  E-value=0.00035  Score=74.55  Aligned_cols=78  Identities=14%  Similarity=0.186  Sum_probs=47.7

Q ss_pred             CCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCCCccceeec--CccccChhccccC---CCCccccccchhHHH
Q 006317          444 RLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVG--TFGYMAPEYVTRG---HFSIKSDVFSFGVLV  518 (650)
Q Consensus       444 ~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~s~~sDV~S~Gvll  518 (650)
                      ...++|+|+++.|||++.++ ++|.||+.+..-....   .......  ...|.+|+.....   .-....++......+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~---Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF---DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT  306 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH---HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH---HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence            45699999999999999876 9999998876422100   0000000  1235566544311   112235566888888


Q ss_pred             HHHHhCC
Q 006317          519 LEIISGQ  525 (650)
Q Consensus       519 ~elltG~  525 (650)
                      |+.++++
T Consensus       307 ~~~y~~~  313 (420)
T 2pyw_A          307 WNLFNKR  313 (420)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888764


No 275
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18  E-value=0.0011  Score=67.62  Aligned_cols=142  Identities=15%  Similarity=0.137  Sum_probs=79.0

Q ss_pred             CcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCc--eeeecce------eecCCeeEEEEec
Q 006317          330 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN--LVRLLGF------SFEETERLLIYEF  401 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~------~~~~~~~~lv~e~  401 (650)
                      +.|+.|....+|+....+| .+++|+.....  ....+..|+.++..+...+  +.+++..      ....+..+++|+|
T Consensus        28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            4567788889999887555 68899886531  1224556777776664222  2333321      1224567899999


Q ss_pred             CCCCChhH----H----------HHhhhcc---C---C---CCHHHHHHH------------HHHHHHHHHHhhhc----
Q 006317          402 VPNSSVDK----F----------IFDAIKR---V---Q---LDWETRYKI------------IGGIARGILYLHED----  442 (650)
Q Consensus       402 ~~~gsL~~----~----------l~~~~~~---~---~---l~~~~~~~i------------~~~ia~~L~yLH~~----  442 (650)
                      +++..+..    .          ++.....   .   .   ..|...+.-            ...+.+.++++++.    
T Consensus       105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~  184 (322)
T 2ppq_A          105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD  184 (322)
T ss_dssp             CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred             CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence            99865421    1          1111000   0   0   113221110            01134445555532    


Q ss_pred             CCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          443 SRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       443 ~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      ....++|+|+++.|||++++..+.|.||+.+.
T Consensus       185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            23469999999999999987666899998764


No 276
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.15  E-value=0.001  Score=67.34  Aligned_cols=73  Identities=8%  Similarity=0.171  Sum_probs=45.2

Q ss_pred             cCCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCce-eeecceeecCCeeEEEEecC-CCC
Q 006317          328 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL-VRLLGFSFEETERLLIYEFV-PNS  405 (650)
Q Consensus       328 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e~~-~~g  405 (650)
                      ..+.|+.|....+|+.     ..+++|+....... .....+|+.+++.+...++ .+++++  +.+.-++++||+ ++.
T Consensus        22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~   93 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ   93 (301)
T ss_dssp             SCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred             ceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence            3678999999999998     67888887643211 1123567777776643233 344443  344457899999 655


Q ss_pred             Chh
Q 006317          406 SVD  408 (650)
Q Consensus       406 sL~  408 (650)
                      +|.
T Consensus        94 ~l~   96 (301)
T 3dxq_A           94 TMS   96 (301)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            543


No 277
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.10  E-value=0.0044  Score=63.28  Aligned_cols=141  Identities=16%  Similarity=0.159  Sum_probs=81.3

Q ss_pred             CcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCC--ceeeecce-----eecCCeeEEEEecC
Q 006317          330 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR--NLVRLLGF-----SFEETERLLIYEFV  402 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~lv~e~~  402 (650)
                      ..|+ |....||+....+|+.+++|+...... ....+..|..++..+...  .+.+++..     ...++..+++|||+
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3466 778899998877788899999864321 234566788887777422  23444443     12245567899999


Q ss_pred             CCCChh-----HH---------HHhhhc------cCCCCHHHH----------------------HHHHHHHHHHHHHhh
Q 006317          403 PNSSVD-----KF---------IFDAIK------RVQLDWETR----------------------YKIIGGIARGILYLH  440 (650)
Q Consensus       403 ~~gsL~-----~~---------l~~~~~------~~~l~~~~~----------------------~~i~~~ia~~L~yLH  440 (650)
                      ++..+.     .+         ++....      ...+++...                      ...+..++..++-+-
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            875432     11         111111      112232211                      011111222222111


Q ss_pred             h-cCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          441 E-DSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       441 ~-~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      . .....++|+|+++.|||++ + .+.|.||+.+.
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            1 1234689999999999999 4 89999998764


No 278
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.99  E-value=0.0041  Score=63.76  Aligned_cols=141  Identities=18%  Similarity=0.140  Sum_probs=71.7

Q ss_pred             CcccccCcee-EEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCC--CceeeecceeecCCeeEEEEecCCCCC
Q 006317          330 NKLGQGGFGA-VYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH--RNLVRLLGFSFEETERLLIYEFVPNSS  406 (650)
Q Consensus       330 ~~LG~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~e~~~~gs  406 (650)
                      +.|+.|.... +|+....+|..+++|.......   ..+..|+.++..+..  -.+.+++.+..+.+  +++||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            4555554443 6676654466777776543221   123456666666532  23455665533333  78999998777


Q ss_pred             hhHHHHhhh--------------------c---cCCCCHHHHH-------H-------------HHHHHHHHHHHhh---
Q 006317          407 VDKFIFDAI--------------------K---RVQLDWETRY-------K-------------IIGGIARGILYLH---  440 (650)
Q Consensus       407 L~~~l~~~~--------------------~---~~~l~~~~~~-------~-------------i~~~ia~~L~yLH---  440 (650)
                      +.+++....                    .   ...++.....       .             ....+...++.|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            655443110                    0   0111111100       0             0001112222221   


Q ss_pred             hcCCCcEEecCCCCCceEeCCC----CCeEEeeeecccc
Q 006317          441 EDSRLRIIHRDLKASNILLDAD----MIPKISDFGMARL  475 (650)
Q Consensus       441 ~~~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~~  475 (650)
                      ......++|+|+.+.|||++.+    +.+.|.||+.+..
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            1123569999999999999875    6789999998753


No 279
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97  E-value=0.0011  Score=70.66  Aligned_cols=72  Identities=18%  Similarity=0.295  Sum_probs=48.0

Q ss_pred             CcccccCceeEEEeeccC--------CcceeEeeccccCchhHHHHHHHHHHHhhCCCCce-eeecceeecCCeeEEEEe
Q 006317          330 NKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL-VRLLGFSFEETERLLIYE  400 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e  400 (650)
                      +.|+.|....||+....+        +..+++|+.....  ....+.+|..++..+...++ .++++.+.+    .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            567888889999988653        4678899874321  11355678888888753344 456655432    38999


Q ss_pred             cCCCCCh
Q 006317          401 FVPNSSV  407 (650)
Q Consensus       401 ~~~~gsL  407 (650)
                      |+++.+|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986444


No 280
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.60  E-value=0.0041  Score=64.99  Aligned_cols=140  Identities=18%  Similarity=0.224  Sum_probs=81.3

Q ss_pred             CcccccCceeEEEeeccC--------CcceeEeeccccCchhHHHHHHHHHHHhhCCCCc-eeeecceeecCCeeEEEEe
Q 006317          330 NKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN-LVRLLGFSFEETERLLIYE  400 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lv~e  400 (650)
                      +.|..|-...+|+....+        ++.+++|+.... ......+.+|..+++.+.-.+ ..++++++.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            567778888899987642        467888886332 223446678999888774322 3456655543    29999


Q ss_pred             cCCCCChhHH--------------H---Hhh-h-ccCCCC--HHHHHHHHHHHHH-------------------HHHHhh
Q 006317          401 FVPNSSVDKF--------------I---FDA-I-KRVQLD--WETRYKIIGGIAR-------------------GILYLH  440 (650)
Q Consensus       401 ~~~~gsL~~~--------------l---~~~-~-~~~~l~--~~~~~~i~~~ia~-------------------~L~yLH  440 (650)
                      |+++.+|..-              |   +.. . -.....  |.++.++..++..                   .+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665311              0   110 0 011122  4455555544321                   233332


Q ss_pred             ----hc-CCCcEEecCCCCCceEeCCC----CCeEEeeeeccc
Q 006317          441 ----ED-SRLRIIHRDLKASNILLDAD----MIPKISDFGMAR  474 (650)
Q Consensus       441 ----~~-~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~  474 (650)
                          .. ....++|+|+.+.|||++++    +.+.|.||..+.
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence                21 23469999999999999876    789999998775


No 281
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.43  E-value=0.0068  Score=65.08  Aligned_cols=74  Identities=12%  Similarity=0.093  Sum_probs=47.3

Q ss_pred             CCcccccCceeEEEeeccC-CcceeEeeccccCchhHHHHHHHHHHHhhCCCCce-eeecceeecCCeeEEEEecCCCCC
Q 006317          329 DNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL-VRLLGFSFEETERLLIYEFVPNSS  406 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e~~~~gs  406 (650)
                      .+.|+.|-...+|+....+ +..+++|+..... ....+..+|..++..|...++ .++++.+.  +  .+||||+++.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            3578888889999998754 4778888874432 111123578888888865555 45666552  2  35999998755


Q ss_pred             h
Q 006317          407 V  407 (650)
Q Consensus       407 L  407 (650)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 282
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.34  E-value=0.033  Score=57.16  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=27.4

Q ss_pred             CCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          444 RLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       444 ~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      ...++|+|+.+.||++++++.+.|.||+.+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            3569999999999999988889999998765


No 283
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33  E-value=0.0036  Score=65.27  Aligned_cols=73  Identities=11%  Similarity=0.089  Sum_probs=42.5

Q ss_pred             CcccccCceeEEEeeccC---------CcceeEeeccccCchhHHHHHHHHHHHhhCCCCce-eeecceeecCCeeEEEE
Q 006317          330 NKLGQGGFGAVYKGRLSH---------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL-VRLLGFSFEETERLLIY  399 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~  399 (650)
                      +.|+.|....+|+....+         +..+++|+...... ...+...|..++..+...++ .++++..  .  -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            567778888999987654         25788888654321 11124567777777743333 3555433  2  37899


Q ss_pred             ecCCCCCh
Q 006317          400 EFVPNSSV  407 (650)
Q Consensus       400 e~~~~gsL  407 (650)
                      ||+++..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987544


No 284
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.75  E-value=0.079  Score=50.09  Aligned_cols=103  Identities=11%  Similarity=0.043  Sum_probs=66.8

Q ss_pred             CChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecccccccCCCCCc
Q 006317          405 SSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGD  484 (650)
Q Consensus       405 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~  484 (650)
                      -||.++|..  .+.+++++++|.++.|.++.|.-+-.... + ..+=+-|..|+|..+|.+.+.+ ..+.          
T Consensus        33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------   97 (229)
T 2yle_A           33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------   97 (229)
T ss_dssp             EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred             ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence            388998875  56789999999999999999877621110 1 1222346899999999987753 1110          


Q ss_pred             cceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCC
Q 006317          485 TSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKN  527 (650)
Q Consensus       485 ~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p  527 (650)
                          .....+.+||... ...+.+.=|||+|++||.-+-=..|
T Consensus        98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence                0122466888653 3456888999999999988874443


No 285
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.06  E-value=0.041  Score=57.67  Aligned_cols=141  Identities=17%  Similarity=0.202  Sum_probs=79.0

Q ss_pred             CcccccCceeEEEeeccC--------CcceeEeeccccCch------------------hHHHHHHHHHHHhhCCCCc-e
Q 006317          330 NKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQ------------------GELEFKNEVLLVARLQHRN-L  382 (650)
Q Consensus       330 ~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~------------------~~~~~~~E~~~l~~l~H~n-i  382 (650)
                      +.|..|-...+|+....+        +..|.+++.-.....                  .......|..+++.+...+ .
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            456667777888877643        256777776432110                  0112335888888775333 4


Q ss_pred             eeecceeecCCeeEEEEecCCCCChhH--H-----H----------Hhh-h-ccCCCC--HHHHHHHHHHHH--------
Q 006317          383 VRLLGFSFEETERLLIYEFVPNSSVDK--F-----I----------FDA-I-KRVQLD--WETRYKIIGGIA--------  433 (650)
Q Consensus       383 v~l~g~~~~~~~~~lv~e~~~~gsL~~--~-----l----------~~~-~-~~~~l~--~~~~~~i~~~ia--------  433 (650)
                      .++++++..    .+|+||+++-+|..  +     +          +.. . -.....  |..+.++..++.        
T Consensus       138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            456666543    28999999755521  1     0          100 0 011122  334444443321        


Q ss_pred             --------------HHH----HHhhhc-CCCcEEecCCCCCceEeCCC------CCeEEeeeeccc
Q 006317          434 --------------RGI----LYLHED-SRLRIIHRDLKASNILLDAD------MIPKISDFGMAR  474 (650)
Q Consensus       434 --------------~~L----~yLH~~-~~~~iiHrDlk~~NILl~~~------~~~kl~DFGla~  474 (650)
                                    .-+    .+|... ....++|+|+.+.|||++++      +.+.|.||..+.
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                          112    223222 23468999999999999887      789999998764


No 286
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.41  E-value=0.096  Score=55.40  Aligned_cols=140  Identities=14%  Similarity=0.132  Sum_probs=82.1

Q ss_pred             CCcccccCceeEEEeeccC--------CcceeEeeccccCchhHHHHHHHHHHHhhCCCCce-eeecceeecCCeeEEEE
Q 006317          329 DNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL-VRLLGFSFEETERLLIY  399 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~  399 (650)
                      .+.|..|-...+|+....+        +..+++|+..... ....+..+|..+++.+...++ .++++.+  .  -++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence            3567778888899987653        5778888864432 111234578888877743233 4445432  2  37899


Q ss_pred             ecCCCCChhH-------H----------HHhh-h---------ccCCCCHHHHHHHHHHH-------------------H
Q 006317          400 EFVPNSSVDK-------F----------IFDA-I---------KRVQLDWETRYKIIGGI-------------------A  433 (650)
Q Consensus       400 e~~~~gsL~~-------~----------l~~~-~---------~~~~l~~~~~~~i~~~i-------------------a  433 (650)
                      ||+++.+|..       .          |+.. .         .+.+.-|.++.++..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            9999876421       1          1110 1         01111244444443322                   2


Q ss_pred             HHHHHhh---------------------hcCCCcEEecCCCCCceEeCCCCCeEEeeeeccc
Q 006317          434 RGILYLH---------------------EDSRLRIIHRDLKASNILLDADMIPKISDFGMAR  474 (650)
Q Consensus       434 ~~L~yLH---------------------~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~  474 (650)
                      ..+.+|.                     ......++|+|+.+.||+ ++++.+.|.||..+.
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            2233332                     112346899999999999 888899999998875


No 287
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.49  E-value=0.053  Score=36.89  Aligned_cols=20  Identities=35%  Similarity=0.549  Sum_probs=9.5

Q ss_pred             HHHHHHHHHHhhhhhhcchh
Q 006317          277 IIALVALITCVFLRRRKKKQ  296 (650)
Q Consensus       277 ~i~l~~~~~~~~~rrr~~~~  296 (650)
                      +++++++.+++++|||++++
T Consensus        23 ~~~ii~~~~~~~~RRr~~~~   42 (44)
T 2ks1_B           23 LLLVVALGIGLFMRRRHIVR   42 (44)
T ss_dssp             HHHHHHHHHHHHHHTTTCCS
T ss_pred             HHHHHHHHHHHHhhhhHhhc
Confidence            33344444455555555443


No 288
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.96  E-value=0.052  Score=36.83  Aligned_cols=21  Identities=38%  Similarity=0.752  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHhhhhhhcchh
Q 006317          276 FIIALVALITCVFLRRRKKKQ  296 (650)
Q Consensus       276 ~~i~l~~~~~~~~~rrr~~~~  296 (650)
                      ++++++++.+++++|||++++
T Consensus        21 ~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A           21 FILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHhhhhhhhh
Confidence            333344455455556555544


No 289
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.12  E-value=0.77  Score=48.04  Aligned_cols=29  Identities=28%  Similarity=0.368  Sum_probs=24.6

Q ss_pred             cEEecCCCCCceEe------CCCCCeEEeeeeccc
Q 006317          446 RIIHRDLKASNILL------DADMIPKISDFGMAR  474 (650)
Q Consensus       446 ~iiHrDlk~~NILl------~~~~~~kl~DFGla~  474 (650)
                      .++|+|+.+.|||+      +++..+.+.||..+.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46799999999999      456779999998875


No 290
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.47  E-value=0.12  Score=34.93  Aligned_cols=19  Identities=16%  Similarity=0.649  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHhhhhhhcch
Q 006317          277 IIALVALITCVFLRRRKKK  295 (650)
Q Consensus       277 ~i~l~~~~~~~~~rrr~~~  295 (650)
                      +++++++++++|+|||+.+
T Consensus        23 l~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           23 LVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHHHhheehhhhh
Confidence            3344444445555555544


No 291
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.42  E-value=0.13  Score=55.04  Aligned_cols=61  Identities=8%  Similarity=0.114  Sum_probs=18.6

Q ss_pred             CcCCcccccCceeEEEeeccC-CcceeE------eeccccCc--hhHHHHHHHHHHHhhCCCCceeeecceee
Q 006317          327 STDNKLGQGGFGAVYKGRLSH-GQEIAV------KRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSF  390 (650)
Q Consensus       327 ~~~~~LG~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~  390 (650)
                      ...++||   ||.||+|.+.. ..+|||      |..+....  +....+.+|..++.+++|||+++.+++..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            3456777   99999999864 468999      76654322  22346788999999999999999988754


No 292
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.17  E-value=4.1  Score=38.39  Aligned_cols=116  Identities=9%  Similarity=0.038  Sum_probs=75.4

Q ss_pred             CCCCceeeecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHH-HhhhcCCCcEEecCCCCC
Q 006317          377 LQHRNLVRLLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGIL-YLHEDSRLRIIHRDLKAS  455 (650)
Q Consensus       377 l~H~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiHrDlk~~  455 (650)
                      ..||++  -..+-.+++...+.++--+++.=..-+      ..++...+++++..|+.... +++.     -+|--|.|+
T Consensus        47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~  113 (219)
T 4ano_A           47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE  113 (219)
T ss_dssp             GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred             ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence            367877  333445666666666655333211122      35788999999999988766 5554     478889999


Q ss_pred             ceEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCC
Q 006317          456 NILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNS  529 (650)
Q Consensus       456 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~  529 (650)
                      |++++.++.++|.-.|+-..                   ++|.-+     +...=+-.+=+++..++.++..|+
T Consensus       114 NL~f~~~~~p~i~hRGi~~~-------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGVKES-------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             GEEECTTCCEEESCCEETTT-------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             eEEEeCCCcEEEEEcCCccc-------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999999988876532                   233211     111112256678888888887653


No 293
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.10  E-value=3.1  Score=39.06  Aligned_cols=117  Identities=10%  Similarity=0.076  Sum_probs=78.4

Q ss_pred             CCCCceeeecceeecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEecCCCCCc
Q 006317          377 LQHRNLVRLLGFSFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGIARGILYLHEDSRLRIIHRDLKASN  456 (650)
Q Consensus       377 l~H~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N  456 (650)
                      ..||+++.. .+..+++...+.++.-++  ...|-    .-..++...+++++..|+....+++.     =+|--|.|.|
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~----~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N  109 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD----NIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE  109 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG----GGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcc--cCCHH----HHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence            468888876 455666666666655432  22221    22457889999999999988766654     3788899999


Q ss_pred             eEeCCCCCeEEeeeecccccccCCCCCccceeecCccccChhccccCCCCccccccchhHHHHHHHhCCCCCC
Q 006317          457 ILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNS  529 (650)
Q Consensus       457 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDV~S~Gvll~elltG~~p~~  529 (650)
                      ++++.++.++|.-.|+-..+                   +|.     ..+...=.-.+=+++..+++++..|+
T Consensus       110 L~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          110 LFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             EEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             EEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999999887765322                   222     11111222356678888999987764


No 294
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=75.35  E-value=0.47  Score=31.18  Aligned_cols=27  Identities=19%  Similarity=0.277  Sum_probs=11.9

Q ss_pred             CeEEEeeehhHHHHHHHHHHHHHhhhhh
Q 006317          264 GTVVIIVVSTSTFIIALVALITCVFLRR  291 (650)
Q Consensus       264 ~~~~~i~v~~~~~~i~l~~~~~~~~~rr  291 (650)
                      ..++.+++++.+.++++++++ ++++||
T Consensus        11 GaIAGiVvG~v~gv~li~~l~-~~~~rr   37 (38)
T 2k1k_A           11 GEIVAVIFGLLLGAALLLGIL-VFRSRR   37 (38)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHHHCC
T ss_pred             CceeeeehHHHHHHHHHHHHH-HHHeec
Confidence            344455555544444444333 334443


No 295
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=56.06  E-value=1  Score=48.49  Aligned_cols=32  Identities=16%  Similarity=-0.023  Sum_probs=25.9

Q ss_pred             hhHHHHHHHHHHHhhCCCCceeeecceeecCC
Q 006317          362 QGELEFKNEVLLVARLQHRNLVRLLGFSFEET  393 (650)
Q Consensus       362 ~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  393 (650)
                      .+..+|..|++.+.+++|+|+|+++|||....
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            34668999999999999999999999997653


No 296
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.86  E-value=2.9e+02  Score=30.00  Aligned_cols=83  Identities=17%  Similarity=0.096  Sum_probs=49.5

Q ss_pred             eeecceeecCCeeEEEEecCCCCChhHHHH----------hhhccC----CCCHHHHHHHHHHHHH--HHHHhhhcCCCc
Q 006317          383 VRLLGFSFEETERLLIYEFVPNSSVDKFIF----------DAIKRV----QLDWETRYKIIGGIAR--GILYLHEDSRLR  446 (650)
Q Consensus       383 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~----~l~~~~~~~i~~~ia~--~L~yLH~~~~~~  446 (650)
                      ++.+.+..-..... +.|++++.++.+.+.          ......    ...|..+..++..+|-  -+.|+=      
T Consensus       402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL------  474 (614)
T 3ls8_A          402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL------  474 (614)
T ss_dssp             CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee------
Confidence            34444444443333 467777655555443          211111    1235556666665443  455663      


Q ss_pred             EEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          447 IIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       447 iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                       --+|=.++||||+.+|++.=+|||..
T Consensus       475 -GigDRH~~NILld~tG~v~HIDFG~~  500 (614)
T 3ls8_A          475 -GVGDRHLDNLLLTKTGKLFHIDFGYI  500 (614)
T ss_dssp             -TCCCCCTTSEEECTTSCEEECCCSSC
T ss_pred             -eccCCCCcceeEcCCCCEeeeehHHh
Confidence             34577899999999999999999987


No 297
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=32.75  E-value=6.3  Score=25.16  Aligned_cols=12  Identities=17%  Similarity=0.689  Sum_probs=5.4

Q ss_pred             HHHHHHhhhhhh
Q 006317          281 VALITCVFLRRR  292 (650)
Q Consensus       281 ~~~~~~~~~rrr  292 (650)
                      +++.+.+++|||
T Consensus        23 i~l~~~~~iRRr   34 (35)
T 1iij_A           23 LVVVVGILIKRR   34 (35)
T ss_dssp             HTTTTTHHHHHC
T ss_pred             HHHHhheEEeec
Confidence            333344455554


No 298
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.59  E-value=81  Score=31.56  Aligned_cols=137  Identities=15%  Similarity=0.146  Sum_probs=67.2

Q ss_pred             CCcccccCceeEEEeeccCCcceeEeeccccCchhHHHHHHHHHHHhhCCCCceeeecce--------------------
Q 006317          329 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGF--------------------  388 (650)
Q Consensus       329 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~--------------------  388 (650)
                      .+..-.|. +.||.... ++..++||-..  .. ..+-+-.++...-.+.-|+.--+.-.                    
T Consensus        74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~--~l-~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~  148 (342)
T 1cja_A           74 IERSEKGT-EGLFFVET-ESGVFIVKRST--NI-ESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV  148 (342)
T ss_dssp             EEECCSTT-SCEEEEEE-SSCEEEEECCT--TH-HHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred             EEeccCCC-CCeEEEEe-CCCEEEEeCcH--HH-HHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence            34445555 45555554 57789999542  21 22234444444444555542111100                    


Q ss_pred             --eecCCeeEEEEecCCCCChhHHHHhhhccCCCCHHHHHHHHHHH--HHHHHHhh-hcCCCcEEe-cCCCCCceEeCCC
Q 006317          389 --SFEETERLLIYEFVPNSSVDKFIFDAIKRVQLDWETRYKIIGGI--ARGILYLH-EDSRLRIIH-RDLKASNILLDAD  462 (650)
Q Consensus       389 --~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--a~~L~yLH-~~~~~~iiH-rDlk~~NILl~~~  462 (650)
                        .......+++|||.+|..|.+.-... -...+..+.    ..++  +-++.++. ...+.+.+. .--.+.|||++++
T Consensus       149 l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~  223 (342)
T 1cja_A          149 ITTLANQANILLMELVRGITLNKLTTTS-APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER  223 (342)
T ss_dssp             HHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred             HHHhhcccceehhhhcCCCccccchhhh-hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence              00123456999999876654321100 001122222    2222  22344444 333333333 2257889999876


Q ss_pred             CC-eEEeeeecccc
Q 006317          463 MI-PKISDFGMARL  475 (650)
Q Consensus       463 ~~-~kl~DFGla~~  475 (650)
                      +. +.++|-+++..
T Consensus       224 n~~~~~IDhn~af~  237 (342)
T 1cja_A          224 GATVVPIDSKIIPL  237 (342)
T ss_dssp             TTCEEECSCCCCCC
T ss_pred             CCeEEEEcCCcccc
Confidence            54 88889888743


No 299
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=27.91  E-value=19  Score=26.39  Aligned_cols=13  Identities=15%  Similarity=0.319  Sum_probs=4.9

Q ss_pred             eeehhHHHHHHHH
Q 006317          269 IVVSTSTFIIALV  281 (650)
Q Consensus       269 i~v~~~~~~i~l~  281 (650)
                      |+++.++.+++++
T Consensus        12 ivlGg~~~lll~~   24 (70)
T 2klu_A           12 IVLGGVAGLLLFI   24 (70)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHH
Confidence            3444433333333


No 300
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=25.80  E-value=58  Score=20.90  Aligned_cols=7  Identities=43%  Similarity=0.795  Sum_probs=2.7

Q ss_pred             hhhhcch
Q 006317          289 LRRRKKK  295 (650)
Q Consensus       289 ~rrr~~~  295 (650)
                      .|..+++
T Consensus        21 iRPQ~Kr   27 (37)
T 2rdd_B           21 LRPQQKR   27 (37)
T ss_dssp             HHHHHHH
T ss_pred             hhhHHHH
Confidence            3433333


No 301
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=24.33  E-value=3.8e+02  Score=31.33  Aligned_cols=59  Identities=17%  Similarity=0.120  Sum_probs=37.8

Q ss_pred             ChhHHHHhhhccCCCCHHHH-HHHHHHHH--HHHHHhhhcCCCcEEecCCCCCceEeCCCCCeEEeeeecc
Q 006317          406 SVDKFIFDAIKRVQLDWETR-YKIIGGIA--RGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMA  473 (650)
Q Consensus       406 sL~~~l~~~~~~~~l~~~~~-~~i~~~ia--~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla  473 (650)
                      .|.+|+....  ....|..+ ..++..+|  ..+.|+       +--+|=.++||||+.+|++.=+|||..
T Consensus       899 ~L~~~f~~~~--~~~~~~~ar~nF~~S~A~ysvv~Yi-------LgigDRH~~NILid~tG~v~HIDFG~~  960 (1091)
T 3hhm_A          899 TLHQWLKDKN--KGEIYDAAIDLFTRSCAGYCVATFI-------LGIGDRHNSNIMVKDDGQLFHIDFGHF  960 (1091)
T ss_dssp             HHHHHHHTTS--CTTSHHHHHHHHHHHHHHHHHHHHH-------HTCCCCCTTTEEEETTSCEEECCCCCC
T ss_pred             HHHHHHHhcC--ChHHHHHHHHHHHHHhhhhhheEEE-------EeecCCCCcceEEeCCCCEEEEeehhh
Confidence            4555554321  23445543 34555443  235565       334678899999999999999999987


No 302
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.82  E-value=42  Score=23.65  Aligned_cols=6  Identities=33%  Similarity=0.744  Sum_probs=2.3

Q ss_pred             hhhhhc
Q 006317          288 FLRRRK  293 (650)
Q Consensus       288 ~~rrr~  293 (650)
                      |.+|++
T Consensus        35 FFKR~~   40 (54)
T 2l8s_A           35 FFKRPL   40 (54)
T ss_dssp             HTTSCC
T ss_pred             cccCCC
Confidence            344333


No 303
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.44  E-value=51  Score=23.27  Aligned_cols=6  Identities=33%  Similarity=1.076  Sum_probs=2.3

Q ss_pred             hhhhhc
Q 006317          288 FLRRRK  293 (650)
Q Consensus       288 ~~rrr~  293 (650)
                      |.+|++
T Consensus        38 FFkR~~   43 (54)
T 2knc_A           38 FFKRNR   43 (54)
T ss_dssp             HTTTTC
T ss_pred             cccCCC
Confidence            333333


Done!