Your job contains 1 sequence.
>006319
MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE
VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG
RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL
RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF
SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE
DSNYTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLL
PLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKS
PLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVEL
KGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLF
TQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGS
LIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006319
(650 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 2672 5.3e-278 1
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 1672 4.9e-172 1
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 1667 1.7e-171 1
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 1667 1.7e-171 1
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 1656 2.4e-170 1
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 1654 4.0e-170 1
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 1631 1.1e-167 1
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 1597 4.3e-164 1
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 1465 4.2e-150 1
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 1457 3.0e-149 1
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 1444 7.1e-148 1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 1417 5.1e-145 1
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 1394 1.4e-142 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 1337 1.5e-136 1
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 1335 2.5e-136 1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 1298 2.1e-132 1
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 1297 2.7e-132 1
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 1269 2.5e-129 1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 694 1.6e-128 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 1234 1.3e-125 1
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 1203 2.4e-122 1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 518 9.9e-84 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 572 2.7e-81 2
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 819 5.0e-81 1
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 813 2.2e-80 1
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 785 4.8e-78 1
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 785 4.8e-78 1
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 785 4.8e-78 1
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 785 4.8e-78 1
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 785 4.8e-78 1
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 791 5.8e-78 1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 786 1.6e-77 1
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 786 2.0e-77 1
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 785 2.6e-77 1
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 785 2.6e-77 1
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 783 4.3e-77 1
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 770 1.9e-76 1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 468 7.7e-75 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 435 9.7e-75 2
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 733 1.6e-72 1
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 737 3.5e-72 1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 470 3.9e-71 2
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 437 3.2e-65 3
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 539 1.4e-51 2
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s... 337 3.0e-34 2
TAIR|locus:2020573 - symbol:EMB25 "EMBRYO DEFECTIVE 25" s... 262 8.3e-23 2
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 212 2.7e-16 1
UNIPROTKB|H0YAC4 - symbol:SKIV2L2 "Superkiller viralicidi... 180 7.6e-13 1
RGD|1560014 - symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box po... 200 1.7e-12 2
WB|WBGene00016194 - symbol:C28H8.3 species:6239 "Caenorha... 196 2.1e-11 1
UNIPROTKB|J9P0M0 - symbol:DDX60 "Uncharacterized protein"... 191 3.8e-11 2
UNIPROTKB|E2QSY2 - symbol:DDX60 "Uncharacterized protein"... 191 3.8e-11 2
UNIPROTKB|Q5H9U9 - symbol:DDX60L "Probable ATP-dependent ... 198 5.7e-11 2
UNIPROTKB|F1RIW4 - symbol:DDX60 "Uncharacterized protein"... 188 6.2e-11 2
UNIPROTKB|Q8IY21 - symbol:DDX60 "Probable ATP-dependent R... 183 5.3e-10 1
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 176 6.4e-10 2
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 181 7.4e-10 2
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh... 182 8.2e-10 1
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 180 1.7e-09 1
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 180 1.7e-09 1
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO... 176 2.0e-09 1
POMBASE|SPAC694.02 - symbol:SPAC694.02 "DEAD/DEAH box hel... 177 2.3e-09 1
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot... 174 4.2e-09 1
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab... 178 4.5e-09 2
UNIPROTKB|H9L351 - symbol:H9L351 "Uncharacterized protein... 159 5.2e-09 1
FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie... 167 6.9e-09 2
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 177 1.8e-08 2
SGD|S000000974 - symbol:BRR2 "RNA-dependent ATPase RNA he... 168 2.8e-08 1
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 163 3.7e-08 1
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 167 3.7e-08 1
UNIPROTKB|E3W980 - symbol:HELQ "Helicase POLQ-like" speci... 163 4.1e-08 1
UNIPROTKB|Q8TDG4 - symbol:HELQ "Helicase POLQ-like" speci... 163 4.5e-08 1
FB|FBgn0002899 - symbol:mus301 "mutagen-sensitive 301" sp... 161 6.9e-08 1
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ... 173 7.4e-08 2
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150... 164 7.7e-08 1
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 164 7.8e-08 1
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 164 7.8e-08 1
MGI|MGI:2176740 - symbol:Helq "helicase, POLQ-like" speci... 160 9.1e-08 1
UNIPROTKB|G4MUH1 - symbol:MGG_07250 "DEAD/DEAH box helica... 173 9.4e-08 2
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 163 9.9e-08 1
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 163 1.0e-07 1
UNIPROTKB|F1PXD9 - symbol:POLQ "Uncharacterized protein" ... 162 1.0e-07 1
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 162 1.1e-07 1
ZFIN|ZDB-GENE-060503-421 - symbol:helq "helicase, POLQ-li... 161 1.2e-07 2
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 162 1.3e-07 1
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 162 1.3e-07 1
UNIPROTKB|J9P160 - symbol:HELQ "Uncharacterized protein" ... 165 1.3e-07 2
UNIPROTKB|E2RST3 - symbol:HELQ "Uncharacterized protein" ... 165 1.4e-07 2
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 158 1.5e-07 1
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co... 161 1.5e-07 1
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71... 157 1.9e-07 2
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch... 160 2.0e-07 1
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 159 3.5e-07 2
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 168 3.6e-07 2
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 170 3.8e-07 2
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 170 3.8e-07 2
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 157 3.9e-07 2
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ... 165 5.0e-07 2
UNIPROTKB|E9PT19 - symbol:Helq "Protein Helq" species:101... 159 5.5e-07 2
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 159 5.5e-07 2
WARNING: Descriptions of 30 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 2672 (945.6 bits), Expect = 5.3e-278, P = 5.3e-278
Identities = 517/650 (79%), Positives = 589/650 (90%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+K+ L DDEK +ETIF SA+DMLSDDDKKLPQVSNILP+LKRGIGVHHSGLLPILKE
Sbjct: 340 MSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILKRGIGVHHSGLLPILKE 399
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW+SSGEYIQMSGRAG
Sbjct: 400 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAG 459
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRGID+RGICILMVD+KMEP+ AK MLKGSADSLNSAFHLSYNMLLNQ+RCEEG PENLL
Sbjct: 460 RRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRCEEGDPENLL 519
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
RNSF+QFQAD AIPDLEKQ K LEEERDS+VIEEE+SLKNYYNL+ QYKSLKKD+R+IVF
Sbjct: 520 RNSFFQFQADRAIPDLEKQIKSLEEERDSLVIEEEESLKNYYNLILQYKSLKKDIREIVF 579
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
+PKYCLPFL P R VC++CT D+ SFS ED Q TWGV+++F KVK + EDD +++PE
Sbjct: 580 TPKYCLPFLLPNRAVCLDCTNDDEEPQSFSIED-QDTWGVIMKFNKVKSLSEDDDSRRPE 638
Query: 301 DSNYTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLL 360
D+NYTV++LTRC+VSKDG GKK +K VP+KE GEP+VV+VP+SQI LSSA + +PKDL+
Sbjct: 639 DANYTVDVLTRCMVSKDGVGKKKVKAVPIKERGEPVVVTVPLSQIKSLSSAIMNIPKDLV 698
Query: 361 PLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKS 420
PL+ REN LK SE L+R+ G+PLDPE +M I+SSSY+K VRR+EALE+LF+KH+I+KS
Sbjct: 699 PLEARENALKKVSELLSRHPDGIPLDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKS 758
Query: 421 PLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVEL 480
PLI +KLKVL MK+EL AKIKS+K+ +RSST LAFKDELKARKRVLRRLGY TSD+VVEL
Sbjct: 759 PLITEKLKVLQMKEELIAKIKSLKKTVRSSTALAFKDELKARKRVLRRLGYITSDNVVEL 818
Query: 481 KGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLF 540
KGKVACEISSAEELTLTEL+F+G+ KD KVEE+VSLLSCFVW+E+L DA+KPREEL+LLF
Sbjct: 819 KGKVACEISSAEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLF 878
Query: 541 TQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGS 600
QLQDTARRVA+VQL+CKV+IDVE FV SFRPDIMEAVYAWAKGSKFYE+MEI VFEGS
Sbjct: 879 IQLQDTARRVAEVQLDCKVEIDVESFVQSFRPDIMEAVYAWAKGSKFYEVMEIARVFEGS 938
Query: 601 LIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
LIRAIRR+EEVLQQLI+AAKSIGET+LEAK EEAVSKIKRDIVFAASLYL
Sbjct: 939 LIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 988
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 1672 (593.6 bits), Expect = 4.9e-172, P = 4.9e-172
Identities = 342/652 (52%), Positives = 447/652 (68%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 406 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 465
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 466 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 525
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 526 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 585
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+S+ YY + QQ L K++ + V
Sbjct: 586 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYVH 645
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 646 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 690
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 691 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 751 RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 811 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACEISSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 871 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+AKV E K++ID E ++NSF+P +M+ VY WA G+ F I ++T VFE
Sbjct: 931 PLRQMQECAKRIAKVSAEAKLEIDEETYLNSFKPHLMDVVYTWATGATFAHICKMTDVFE 990
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 991 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 1667 (591.9 bits), Expect = 1.7e-171, P = 1.7e-171
Identities = 340/652 (52%), Positives = 447/652 (68%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 305 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 364
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 365 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 424
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 425 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 484
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+S+ YY + QQ L K++ + +
Sbjct: 485 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIH 544
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 545 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 589
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 590 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 649
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 650 RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 709
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 710 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 769
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACEISSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 770 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 829
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F I ++T VFE
Sbjct: 830 PLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFE 889
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 890 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 941
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 1667 (591.9 bits), Expect = 1.7e-171, P = 1.7e-171
Identities = 340/652 (52%), Positives = 447/652 (68%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 406 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 465
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 466 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 525
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 526 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 585
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+S+ YY + QQ L K++ + +
Sbjct: 586 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIH 645
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 646 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 690
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 691 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 751 RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 811 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACEISSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 871 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F I ++T VFE
Sbjct: 931 PLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFE 990
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 991 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 1656 (588.0 bits), Expect = 2.4e-170, P = 2.4e-170
Identities = 341/655 (52%), Positives = 447/655 (68%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 407 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 466
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 467 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 526
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 527 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 586
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+S+ YY + QQ L K++ + +
Sbjct: 587 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIH 646
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 647 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 691
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 692 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 751
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
PL R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 752 RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 811
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 812 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 871
Query: 479 ELKGKVACEIS---SAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREE 535
E+KG+VACEIS SA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+
Sbjct: 872 EMKGRVACEISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQ 931
Query: 536 LELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITP 595
L Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F I ++T
Sbjct: 932 LAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTD 991
Query: 596 VFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 992 VFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 1654 (587.3 bits), Expect = 4.0e-170, P = 4.0e-170
Identities = 337/652 (51%), Positives = 447/652 (68%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 404 MTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 463
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RK+DG FRWISSGEYIQMSGRAG
Sbjct: 464 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAG 523
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 524 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 583
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+++ YY + QQ L K++ + +
Sbjct: 584 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIH 643
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 644 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 688
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +S+ RL +PKDL
Sbjct: 689 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDL 748
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 749 RPVDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 809 NDPNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACEISSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 869 EMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAG 928
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F I ++T VFE
Sbjct: 929 PLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFE 988
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 989 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 1631 (579.2 bits), Expect = 1.1e-167, P = 1.1e-167
Identities = 330/652 (50%), Positives = 442/652 (67%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
++KLD D+EK +E +F +A D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 399 VSKLDFNTDEEKKLVEEVFNNATDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 458
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGL+K LFATETF++G+NMPA+TV+FT+ RKFDG FRWISSGEYIQMSGRAG
Sbjct: 459 TIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAG 518
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+DERGI I MVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 519 RRGMDERGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 578
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ A+P + + K LEEE +++ I +E+S+ YY + QQ L K++ + +
Sbjct: 579 EKSFYQFQHYRAVPGVVDRMKKLEEEYNAIRIPKEESVVTYYKIRQQLAKLGKEIEEFIH 638
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P+YCLPFLQPGR V ++ ED WGVV+ F+K V
Sbjct: 639 KPRYCLPFLQPGRLVKVK------------KEDLDFGWGVVVNFQKKSNVKAGG----DL 682
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D + V +L C S A ++ + E GE VV V + I +SS RL +PKDL
Sbjct: 683 DPLFVVEVLVHCSKDSVKNAATESARPAGPAEKGEMQVVPVILHLITSISSVRLYIPKDL 742
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P R++MLKS E R G+PL DP +MGI+ + +K+++++EA E H +
Sbjct: 743 RPYDNRQSMLKSIQEVQKRFPDGIPLLDPIDDMGIKDPALKKVIQKVEAFEHRMYTHPLH 802
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E K+ K + IK+ KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 803 SDPNLEAVYKLCEKKALIAGDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 862
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACE SS +EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 863 EMKGRVACETSSGDELLLTEMMFNGLFNDLTAEQATALLSCFVFQENANEMPKLTEQLGG 922
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+AKV E K+++D + ++N FRP +M+ VY WA GS F +I ++T VFE
Sbjct: 923 PLRQMQECAKRIAKVSAEAKLEVDEDSYLNQFRPHLMDVVYTWANGSSFSQICKMTDVFE 982
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF ++KIKRDIVFAASLYL
Sbjct: 983 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFATGITKIKRDIVFAASLYL 1034
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 1597 (567.2 bits), Expect = 4.3e-164, P = 4.3e-164
Identities = 324/652 (49%), Positives = 436/652 (66%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 395 MTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 454
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FT+ KFDG FRWISSGEYIQMSGRAG
Sbjct: 455 TIEILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAG 514
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 515 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 574
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ LEE+ + +VI E+++ YY + QQ L K++ + +
Sbjct: 575 EKSFYQFQHYRAIPGVVEKVNKLEEQYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIH 634
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ ED WGVV+ F K V N
Sbjct: 635 KPKYCLPFLQPGRLVKVK------------NEDDDFGWGVVVNFSKKSNV---KPNSGEL 679
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L C S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 680 DPLYVVEVLLHCSKESLKNSATEAAKPARPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 739
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 740 RPIDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLH 799
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E K+ K ++ IK+ KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 800 NDPNLETIYKLCERKAQIAMDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 859
Query: 479 ELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELEL 538
E+KG+VACEISSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+L
Sbjct: 860 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSNEMPKLTEQLAG 919
Query: 539 LFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFE 598
Q+Q+ A+R+A+V E K++ID E ++NSFRP++M+ VY WA G+ F I ++T VFE
Sbjct: 920 PLRQMQECAKRIARVSAEAKLEIDEENYLNSFRPNLMDVVYTWANGASFAHICKMTDVFE 979
Query: 599 GSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
GS+IR +RRLEE+L+Q+ AAK+IG TELE KF E + R + F + L +
Sbjct: 980 GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGRTYKSRPVSFHSGLQI 1031
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 1465 (520.8 bits), Expect = 4.2e-150, P = 4.2e-150
Identities = 301/653 (46%), Positives = 429/653 (65%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
MAKLD DEK ++ +F +AMD+L+++D++LPQV N+LPLL+RGIG+HH GLLPILKE
Sbjct: 422 MAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLPILKE 481
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++GLNMPA+TV+FT RKFDG KFRWISSGEYIQM+GRAG
Sbjct: 482 TIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAG 541
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D++GI ILM+D+K+ P+ + +++G AD +NSAFHL+YNM+LN +R EE +PE +L
Sbjct: 542 RRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYML 601
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ A+P L Q + E + + I++E ++ +Y+++ Q K R +
Sbjct: 602 ERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWIT 661
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P+Y LPFLQPGR V + ++++ WG+V+ F+K +D + K P
Sbjct: 662 KPQYLLPFLQPGRLVKVAA----------GSQEYD--WGIVLNFKK-----QDQSRKNPL 704
Query: 301 DSNYTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQ--IIKLSSARLPMPKD 358
+ +V I VS+ A KT P K + + VP++ I ++SS R+ P D
Sbjct: 705 KAEPSVTIDVLLHVSE--AAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPND 762
Query: 359 LLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEI 417
L R +LK+ E R G P L+P +M I+ ++ +V I E ++H +
Sbjct: 763 LRSADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPL 822
Query: 418 SKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDV 477
KSP +E+ + K L +++ +K +++++ L DELK RKRVLRR+GY DV
Sbjct: 823 HKSPELERIHRRYQDKVTLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDV 882
Query: 478 VELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELE 537
+E KG+VACE+SSA+EL +TE+IFNGV D+ + V+LLSCFV EK ++ K EL
Sbjct: 883 IEFKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELS 942
Query: 538 LLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVF 597
+QD ARR+AKV ECK+ +D + +V+ F+P +M+ V AW KGS F + ++T +F
Sbjct: 943 GPLRSMQDLARRIAKVSTECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIF 1002
Query: 598 EGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
EGS+IR +RRLEE+L+Q+ A+K+IG T+LE KF E + +KRDIVFAASLYL
Sbjct: 1003 EGSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1055
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 309/664 (46%), Positives = 437/664 (65%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+KLD DDEK +ETIF +A+D LS+ DK+LP V NILPLLKRGIG+HH+GLLPILKE
Sbjct: 479 MSKLDFNNDDEKNAVETIFNNAIDSLSESDKQLPAVINILPLLKRGIGIHHAGLLPILKE 538
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
+IEILFQ G IK LFATETFSIGLNMPAKTV+FT+VRKFDG+ RWIS GEYIQMSGRAG
Sbjct: 539 IIEILFQYGYIKALFATETFSIGLNMPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAG 598
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+DERGI ILMVD+KMEP+ AK M+KG AD L S+F + Y+MLLN +R E+ PENLL
Sbjct: 599 RRGLDERGIVILMVDEKMEPAIAKGMVKGQADRLTSSFWIGYSMLLNMLRVEDIDPENLL 658
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
+ SF+Q+Q + IP L + +E+E+ ++I +E S+ Y ++ Q L++ +RD +
Sbjct: 659 KRSFHQYQQESFIPQLVDKCDQMEQEKKEIIIRDETSVTEYSSIKAQLAKLREAMRDFIN 718
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P Y PFL GR V I + S + +GV++ F K + + + +
Sbjct: 719 QPTYVQPFLTAGRIVRIR-----EGSTDWG-------YGVILNFSK-RPIKSSGSGVSDK 765
Query: 301 DSNYTVNILTRCVVSKD----GAGKKTLK-IVPLKESGEPLVVSVPISQIIKLSSARLPM 355
+IL C +S D G T K VP E GE ++ V I ++S L +
Sbjct: 766 SFEVIADILLECAISSDPTSNGGYIGTPKPCVP-GEVGEGQIIPVSIKLFDGITSVCLYV 824
Query: 356 PKDLLPLQTRENMLKSTSEFLAR--NASGLPL-DPEANMGIRSSSYQKLVRRIEALESLF 412
K+ + + ++ K+ E R G+PL DP +M I+ +++KL+++IE LES F
Sbjct: 825 KKEQPTQEFKTHLFKTLKETENRFKKDGGIPLIDPIEDMKIKDPNFKKLIKKIETLESRF 884
Query: 413 DKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYA 472
IE++ +L K E+T +IK +++Q++S E+ KD+L++ KR+L RLGY
Sbjct: 885 SSTACFNDTDIEERCNLLEKKNEITKEIKQLQKQIKSGDEVILKDDLRSMKRILTRLGYI 944
Query: 473 TSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEK---LQDA 529
T D VV LKG+VACEIS+ +EL ++EL+F G+ D+ VE+ V++ SCFV+Q + D
Sbjct: 945 TDDGVVALKGRVACEISAGDELVISELLFAGLFNDLSVEQCVAVFSCFVFQNEGSANNDV 1004
Query: 530 SKPREELEL--LFTQLQDTARRVAKVQLECKV-QIDVEGFVNSFRPDIMEAVYAWAKGSK 586
+ P+ + +L L+ ++DTA +V V ECK+ +D + ++ SF P+ M+ +AWA G+
Sbjct: 1005 NNPKIKPDLVPLYRVIRDTASKVVTVSQECKLTSVDEKTYLASFNPNFMDVTFAWASGAS 1064
Query: 587 FYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAA 646
F +I+++T FEG+LIR IRRL+E+++Q+++A+KSIG TELEAKF EA KIKRDI FA
Sbjct: 1065 FADIVKMTDTFEGNLIRGIRRLDELIRQMVIASKSIGNTELEAKFSEATVKIKRDIPFAG 1124
Query: 647 SLYL 650
SLYL
Sbjct: 1125 SLYL 1128
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 313/658 (47%), Positives = 434/658 (65%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+KLD+ + E+ + TIF +A++ LS+ D++LPQ+ +ILPLL+RGIG+HHSGLLPILKE
Sbjct: 474 MSKLDMNDQTERDLVTTIFNNAVNQLSEKDRELPQIEHILPLLRRGIGIHHSGLLPILKE 533
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
VIEILFQEGL+K LFATETFSIGLNMPAKTVVFTNVRKFDG FRWIS GEYIQMSGRAG
Sbjct: 534 VIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAG 593
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILM+D+KM+P AK MLKG AD L+SAFHLSYNM+LN +R E SPE +L
Sbjct: 594 RRGLDDRGIVILMIDEKMDPPVAKSMLKGEADRLDSAFHLSYNMILNLLRVEGISPEFML 653
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
F+QFQ +P LE + + ++ DS I +E L+ Y+ L Q + + DVR +V
Sbjct: 654 ERCFFQFQNSLEVPKLEAKLEESQQHYDSFTILDERPLEEYHTLKTQLERYRTDVRTVVN 713
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P +CL FLQ GR V ++ G+ ED WGVV+ K + + + +N+
Sbjct: 714 HPNFCLSFLQGGRLVRVKV--GN--------EDFD--WGVVVNVSK-RPLPKGQSNEYLP 760
Query: 301 DSNYTVNILTRCVVSKDGAGKKTLKIVP------LKESGEPLVVSVPISQIIKLSSARLP 354
+Y V+ L V S G + +P ++ G+ VV +S + ++ R+
Sbjct: 761 QESYIVHTLVM-VASDTGPLRIRSGHLPEVHPPAAEDKGKFEVVPFLLSSLDGIAHIRVF 819
Query: 355 MPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFD 413
+P DL + + K+ SE R G+ L DP NM I+ ++ KL++++ LES
Sbjct: 820 LPNDLKSQGQKLTVGKALSEVKRRFPEGITLLDPVENMNIKEPTFIKLMKKVNILESRLL 879
Query: 414 KHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYAT 473
+ + +E+K K L ++K +K+++ + + DEL +RKRVLRRLG+ T
Sbjct: 880 SNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQLDELNSRKRVLRRLGFTT 939
Query: 474 SDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQ-DASKP 532
SDDV+E+KG+VACEISS + L LTELIFNG+ D+ E+ +LLSC V+QEK + + +
Sbjct: 940 SDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTPEQCAALLSCLVFQEKSEVENQRM 999
Query: 533 REELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIME 592
+EEL LQ+ ARR+AKV E K +++ E +VNSF+P +ME VYAWA G+ F +I +
Sbjct: 1000 KEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNSFKPSLMEVVYAWAHGASFAQICK 1059
Query: 593 ITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+T V+EGSLIR RRLEE+++Q++ AAK IG T L+ K E+ ++ I RDIVF+ASLYL
Sbjct: 1060 MTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTIACIHRDIVFSASLYL 1117
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 301/660 (45%), Positives = 430/660 (65%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+KLD DDEK + IF +A+ +L + D++LPQ+ +ILPLL+RGIG+HHSGLLPILKE
Sbjct: 426 MSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKE 485
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
VIEILFQEG +K LFATETFSIGLNMPAKTVVFT+VRK+DG +FRW+S GEYIQMSGRAG
Sbjct: 486 VIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAG 545
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI I+M+D+KMEP AK M+KG AD L+SAFHL YNM+LN +R E SPE +L
Sbjct: 546 RRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFML 605
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
+SF+QFQ ++P +EK+ L+++ D + +E+E+++K Y+ + Q K ++DVR +V
Sbjct: 606 EHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDEENVKEYHEIEQAIKGYREDVRQVVT 665
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P L FLQPGR V I G DN WG V++F K A
Sbjct: 666 HPANALSFLQPGRLVEIS-VNGKDN----------YGWGAVVDFAKRINKRNPSAVYTDH 714
Query: 301 DSNYTVNIL--TRCVVSKDGAGKK---TLK--IVPLKESGEPLVVSVPIS--QIIKLSSA 351
+S Y VN++ T + S K TL I P +E + + +PI+ I + +
Sbjct: 715 ES-YIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVIPITLDSIKSIGNL 773
Query: 352 RLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALES 410
RL MPKD+ +E + KS E R G+P LDP NM I + KL+++I+ L +
Sbjct: 774 RLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNT 833
Query: 411 LFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLG 470
+ ++ S +E+ K +L +K +KR++ S + D+L+ RKRVLRRLG
Sbjct: 834 KLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLDDLRRRKRVLRRLG 893
Query: 471 YATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDAS 530
+ T +D++ELKG+VACEISS +EL LTELIFNG ++K E+ +LLSCF +QE+ ++A
Sbjct: 894 FCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEAP 953
Query: 531 KPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEI 590
+ + EL +++ A ++AK+ + K+++ + +V SFR ++ME VY W +G+ F +I
Sbjct: 954 RLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVESFRHELMEVVYEWCRGATFTQI 1013
Query: 591 MEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
++T V+EGSLIR +RLEE++++L+ A +IG + L+ K E + I RDIV A SLYL
Sbjct: 1014 CKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1073
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
Identities = 298/659 (45%), Positives = 422/659 (64%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M L +D EK + +F SA++MLS++D+ LPQ+ NILPLL+RGIGVHHSGLLPILKE
Sbjct: 430 MKSLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNILPLLRRGIGVHHSGLLPILKE 489
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILFQEGLIK LFATETFSIGLNMPAKTVVFT+VRKFDG RW++ E++QMSGRAG
Sbjct: 490 TIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAG 549
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI I+M+ ++M+P+ AK +++G D LNSAFHL YNM+LN +R E SPE +L
Sbjct: 550 RRGLDDRGIVIMMIGEEMDPAVAKEIVRGEQDRLNSAFHLGYNMILNLMRVEGISPEFML 609
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
FYQFQ + LEK+ LEE+R +M I +E +++ YY++ Q DVR ++
Sbjct: 610 ERCFYQFQNTAGLAGLEKELAELEEKRANMTISDEGTIREYYDIRTQIDQFNDDVRAVIS 669
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P+Y +PFL PGR + I+ +D WGVV+ +K K + ++ +
Sbjct: 670 HPEYSVPFLTPGRLLHIKY------------KDFDFGWGVVVNIKKRKP--QKNSEELTG 715
Query: 301 DSNYTVNILTRCVVSKDGAGKKTLK-----IVPLKESGEPLVVSVPI--SQIIKLSSARL 353
++Y V++L R V +G KT + + P KE + + VP+ + I +S R+
Sbjct: 716 HASYIVDVLLR-VADGSSSGTKTFEDLPQGVRPPKEGEKSQMEVVPLLLNCIQAISHVRM 774
Query: 354 PMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLF 412
+PKDL +R +M K + R G+ LDP +MGI+ ++K +R+IE LES
Sbjct: 775 IVPKDLQSKDSRTDMGKKVEQIKKRFPDGIAVLDPIEDMGIKDDEFKKTLRKIEVLESRL 834
Query: 413 DKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYA 472
+ + SP +E+ + K +L KIK+ K+++ + DELK RKRVLRR G+
Sbjct: 835 VTNPLHNSPRLEELYEQYAEKLDLGNKIKATKKKISEGMAIQQLDELKCRKRVLRRFGFI 894
Query: 473 TSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASK- 531
+VV+LK +VACEIS+ +EL L+EL+FNG + E+ ++LS FV++EK ++
Sbjct: 895 NEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQAAAVLSVFVFEEKTKETPPL 954
Query: 532 PREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIM 591
+EEL ++Q AR +AKV E K+ + E +V SF ++ME +Y WA G F +I
Sbjct: 955 SKEELAKPLKEIQAQARIIAKVAQESKLAVSEEDYVQSFHWELMEVIYEWANGKSFADIC 1014
Query: 592 EITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+T V+EGSLIR RRLEE L+Q+ AAK +G ELE+KFE A++K++RDIV A SLYL
Sbjct: 1015 GMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEELESKFETALTKVRRDIVAAQSLYL 1073
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 1337 (475.7 bits), Expect = 1.5e-136, P = 1.5e-136
Identities = 280/549 (51%), Positives = 363/549 (66%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV N+LPLLKRGIG+HH GLLPILKE
Sbjct: 404 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGIGIHHGGLLPILKE 463
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 464 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 523
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 524 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 583
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SFYQFQ AIP + ++ K EE+ + +VI E+S+ YY + QQ L K++ + +
Sbjct: 584 EKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIH 643
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
PKYCLPFLQPGR V ++ GDD F WGVV+ F K V N
Sbjct: 644 KPKYCLPFLQPGRLVKVK-NEGDD----FG-------WGVVVNFSKKSNV---KPNSGEL 688
Query: 301 DSNYTVNILTRCVV-SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
D Y V +L RC S + + K E GE VV V + + +SS RL +PKDL
Sbjct: 689 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748
Query: 360 LPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEIS 418
PL R+++LKS E R G+PL DP +MGI+ +K+++++EA E H +
Sbjct: 749 RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808
Query: 419 KSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV 478
P +E + K ++ IKS KR+++ + + DELK RKRVLRRLG+ATS DV+
Sbjct: 809 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868
Query: 479 ELKGKVACEIS---SAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREE 535
E+KG+VACEIS SA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K E+
Sbjct: 869 EMKGRVACEISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQ 928
Query: 536 LELLFTQLQ 544
L Q+Q
Sbjct: 929 LAGPLRQMQ 937
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 294/664 (44%), Positives = 425/664 (64%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
++ L+ + E+ +E IF +A+ LS++D+ LPQ+ ++LPLLK+GIGVHHSGLLPILKE
Sbjct: 453 VSTLNFNHESEQKLVEDIFRNAIMSLSEEDQGLPQIQHLLPLLKKGIGVHHSGLLPILKE 512
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILFQE LIK LFATETFSIGLNMPAKTVVF+ V+KFDG K R ++ EYIQMSGRAG
Sbjct: 513 TIEILFQENLIKVLFATETFSIGLNMPAKTVVFSQVKKFDGVKERPLTPSEYIQMSGRAG 572
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI I+M+DDK++P TAK M+ G D LNSAFHL YNM+LN R E SP+ +L
Sbjct: 573 RRGLDDRGIVIMMIDDKLDPETAKGMVCGQQDRLNSAFHLGYNMILNLQRIETVSPQYML 632
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
FYQFQ ++P LEK+ L+++RD+MVI +E ++K+Y+ + QQ ++ KKD+ ++
Sbjct: 633 ERCFYQFQNASSVPALEKKLIELQQQRDAMVIPDESTVKDYHTVRQQIEAYKKDMEAVIQ 692
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P CL F+QPGR + I+ G D F WGVV+ F K V + P+
Sbjct: 693 HPNNCLEFMQPGRLIRIKTPDGVD----FD-------WGVVVNFLPRKPVKFGEEEPPPQ 741
Query: 301 DSNYTVNILT-----------RCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLS 349
+S Y +++ VSK+G ++ + G VV ++ ++ +S
Sbjct: 742 ES-YLMDVALFVSEDSISPPPHASVSKEGHIADGVEPSGSVDHGRLEVVPCLLTCMVAIS 800
Query: 350 SARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEAL 408
R+ MPKD+ L + + E R G+P LDP NMGI+ S++KL+R+IE L
Sbjct: 801 QIRIFMPKDMDHLG-KSQVSHGLEEVQRRFPDGVPILDPIENMGIKDDSFKKLMRKIEVL 859
Query: 409 ESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRR 468
ES + + SP + + +K ELT++IK KR + S +A DELK+R RVLRR
Sbjct: 860 ESRLLSNPLHGSPNLPELWDKYKIKTELTSQIKETKRAINKSYSIAQLDELKSRMRVLRR 919
Query: 469 LGYATSDDVVELKGKVACEISSAE--ELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKL 526
L + ++VV++K +VACEISS E EL ++EL+FNG +++ E ++LSCFV+ EK+
Sbjct: 920 LNFINENEVVQMKARVACEISSTEGHELVISELLFNGFFNELEPEVCAAILSCFVFDEKM 979
Query: 527 QDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSK 586
+ + +E+L+ L ++ A+ +A++ E K+ + E V + + + E V AWAKG
Sbjct: 980 E-GTPLKEDLDKLVREIHAQAKTIARISRESKLDVSDEQVVGNLKWQLTETVLAWAKGRP 1038
Query: 587 FYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAA 646
F EI ++T +EGSL+R +RRLEE+L+Q+ A K +G L+ KFE+A+S I RD+V AA
Sbjct: 1039 FAEICKMTNAYEGSLVRIMRRLEELLRQMAEAGKVMGSEMLQKKFEKALSLISRDVVSAA 1098
Query: 647 SLYL 650
SLYL
Sbjct: 1099 SLYL 1102
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 276/660 (41%), Positives = 425/660 (64%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+KLD D+E+ ++ IF++A+++L + D++LPQ+ NILPLLKRGIG+HHSGLLPILKE
Sbjct: 462 MSKLDFNTDEERNSLTQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLPILKE 521
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
+IEILFQEG +K LFATETFSIGLNMPAKTVVFT+VRK+DG FRW+S GEYIQMSGRAG
Sbjct: 522 IIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAG 581
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI I+M+D+KMEP AK M+KG AD L+SAFHL YNM+LN +R E SPE +L
Sbjct: 582 RRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFML 641
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
+SF+QFQ ++P LE + ++E + IE+E +K+YY+L QQ +DVR ++
Sbjct: 642 EHSFFQFQKASSVPILEGKLAQCKQEFADITIEDEPIIKDYYDLKQQLLKYNEDVRKVIT 701
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
P LPFLQ GR + ++ GD D+ WG+V F K ++++ P
Sbjct: 702 HPGNILPFLQDGRVIKVKI--GD--------LDYG--WGMVTTFTKRNRRHQEEF--APH 747
Query: 301 DSNYTVNIL--TRCVVSKDGAGKKTLKIVP--LK--ESGEPL---VVSVPISQIIKLSSA 351
D+ Y V + T + S KK ++P ++ +SGE +S+ +S I K+S+
Sbjct: 748 DA-YVVEVFITTMFIDSPVNLIKKFNPMLPEGIRPAKSGEQTRAEFISITLSSIEKISTV 806
Query: 352 RLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALES 410
RL +P D + ++K+ + R G+PL DP +M I ++KL+++I+ L+S
Sbjct: 807 RLRVPDDYKSSTAKRTLVKTLKDLPKRLPDGIPLIDPVQSMKITDDDFKKLLQKIDILDS 866
Query: 411 LFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLG 470
+ ++ S ++ K +L +IK ++ Q+ + + D+L KRVL++L
Sbjct: 867 KIVSNPLNNSARLDDLYAKYTAKVDLNNQIKKLEEQIFQAKSIIQLDQLSNMKRVLKKLE 926
Query: 471 YATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDAS 530
+ S++VVELKG+VA E+S+ +EL +TEL+F+G ++ +++ LLS F++QE+ ++
Sbjct: 927 FTGSEEVVELKGRVAAELSTGDELMITELLFSGFFNELTPQQICGLLSAFIFQERAKELP 986
Query: 531 KPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEI 590
K + EL + +TA ++AK+ + ++I + ++ F ++E V+ W+ G+ F I
Sbjct: 987 KLKPELAEPAKVIHETANKIAKISKQSGLEIVEKDYIEQFNLALVEVVFVWSNGASFSSI 1046
Query: 591 MEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
++T ++EGS+IRA+RR E+++QL+ A+K IG EL KFE+ + I RD V +SLY+
Sbjct: 1047 CKMTDIYEGSIIRALRREIELIKQLVDASKIIGNQELVDKFEKCIELINRDFVQVSSLYM 1106
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
Identities = 283/655 (43%), Positives = 407/655 (62%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M+KLD D+EK +E +F +AM L+++D+ LP + +LPLL+RGI VHHSGLLP++KE
Sbjct: 356 MSKLDFNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKE 415
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD R+I SGEYIQMSGRAG
Sbjct: 416 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 475
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEG--SPEN 178
RRG DERGICI+M+D++ME +T + M+ G L S F LSY +LN + EG + E+
Sbjct: 476 RRGKDERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEH 535
Query: 179 LLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDI 238
++R+SF+QFQ + A+PD+ + LEEE + E + Y+NL +K +
Sbjct: 536 VIRHSFHQFQHEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSE 595
Query: 239 VFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKK 298
+ P+ L FL GR V I G D WGVV+ K V A+
Sbjct: 596 IIRPERVLCFLDTGRLVKIR-EGGTDWG-----------WGVVVNVVKNSSVGTGSASS- 642
Query: 299 PEDSNYTVNILTRCVVSKDGAGKKTLKIVPLK-ESGEPLVVSVPISQIIKLSSARLPMPK 357
Y V+ L C G K P E GE VV V + I LS R+ +P
Sbjct: 643 -HGGGYIVDTLLHCSTGFSENGAKPKPCPPRAGEKGEMHVVPVQLPLISALSRLRISVPS 701
Query: 358 DLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHE 416
DL P++ R+++L + E +R G P L P +M I+ + LV +IE +E H
Sbjct: 702 DLRPVEARQSILLALQELSSRFPLGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHP 761
Query: 417 ISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDD 476
+ KS +Q++K K E+ +I+ +K +MR S F+DELK R RVL++LG+ +D
Sbjct: 762 MHKSE-DDQQIKSFQRKAEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADG 820
Query: 477 VVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREEL 536
VV++KG+ AC I + +EL +TEL+FNG D+ ++ +L SCF+ +K + R EL
Sbjct: 821 VVQVKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNEL 880
Query: 537 ELLFTQLQDTARRVAKVQLECKVQIDVEGFVNS-FRPDIMEAVYAWAKGSKFYEIMEITP 595
QLQD+AR++A++Q ECK++IDVE +V S RP +M+ +Y+W+KG+ F EI+++T
Sbjct: 881 TKPLQQLQDSARKIAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTD 940
Query: 596 VFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+FEGS+IR+ RRL+E L QL AA+++GE+ LE+KF A ++R I+FA SLYL
Sbjct: 941 IFEGSIIRSARRLDEFLNQLRAAAEAVGESSLESKFAAASESLRRGIMFANSLYL 995
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 291/658 (44%), Positives = 406/658 (61%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 406 MTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 465
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RK+DG FRWISSGEYIQMSGRAG
Sbjct: 466 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAG 525
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLK-GSADSLNSAFHLSYNMLLNQIRCEEGSPENL 179
RRG+D+RGI ILMVD+KM P+ K +LK G D L++AF+L Y LL + E E+L
Sbjct: 526 RRGMDDRGIVILMVDEKMSPTIGKQLLKKGQGDKLSAAFYLVYVHLLGALFLNEIDKEHL 585
Query: 180 LRNSFYQFQAD-HAI-PDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRD 237
F QF A+ P L + K E + + + + +Y +Q K KK +
Sbjct: 586 HLKPFTQFVLPFRAVWPALTNKVKNKVERFNFVGVMNRPHMP-WYTSTKQ-KMNKKGKQP 643
Query: 238 IVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANK 297
V+ K P+ F+ R +++ G V E+ Y ++ +
Sbjct: 644 KVYIKKN--PY-----FIR---RRENEHEVRIREVGRSRESGRV-RGERKWSKYSPNSGE 692
Query: 298 KPEDSNYTVNILTRCVVSKDGAGKKTLKIV-PLK--ESGEPLVVSVPISQIIKLSSARLP 354
D Y V +L RC SK+ + P K E GE VV V + + +S+ RL
Sbjct: 693 L--DPLYVVEVLLRC--SKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLY 748
Query: 355 MPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFD 413
+PKDL P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA E
Sbjct: 749 IPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMY 808
Query: 414 KHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYAT 473
H + P +E + K ++ IKS KR+++ + + DELK RK R+L +
Sbjct: 809 SHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKPCTRKLIFKI 868
Query: 474 SDDVVELKGKVACEI-SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKP 532
+ D +LK +V+ + SSA+EL LTE++FNG+ D+ E+ +LLSCFV+QE + K
Sbjct: 869 TSDEKQLKHRVSLTVHSSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKL 928
Query: 533 REELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIME 592
E+L Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F I +
Sbjct: 929 TEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICK 988
Query: 593 ITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 989 MTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 694 (249.4 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 154/362 (42%), Positives = 220/362 (60%)
Query: 293 DDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKIV-PLK--ESGEPLVVSVPISQIIKLS 349
D N D Y V +L RC SK+ + P K E GE VV V + + +S
Sbjct: 405 DLPNSGELDPLYVVEVLLRC--SKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAIS 462
Query: 350 SARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEAL 408
+ RL +PKDL P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA
Sbjct: 463 TVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAF 522
Query: 409 ESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRR 468
E H + P +E + K ++ IKS KR+++ + + DELK RK L R
Sbjct: 523 EHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKPCLFR 582
Query: 469 LGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQD 528
G A D++ KG C S A+EL LTE++FNG+ D+ E+ +LLSCFV+QE +
Sbjct: 583 PGKAFLLDLIHRKGYHFCYKSCADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSE 642
Query: 529 ASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFY 588
K E+L Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F
Sbjct: 643 MPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFA 702
Query: 589 EIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASL 648
I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASL
Sbjct: 703 HICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASL 762
Query: 649 YL 650
YL
Sbjct: 763 YL 764
Score = 588 (212.0 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 130/237 (54%), Positives = 157/237 (66%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV ++LPLLKRGIG+HH GLLPILKE
Sbjct: 150 MTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKE 209
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RK+DG FRWISSGEYIQMSGRAG
Sbjct: 210 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAG 269
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLK-GSADSLNSAFHLSYNMLLNQIRCEEGSPENL 179
RRG+D+RGI ILMVD+KM P+ K +LK G D L++ L Y Q+ P +
Sbjct: 270 RRGMDDRGIVILMVDEKMSPTIGKQLLKKGQGDKLSATHALVYIYKSEQLSGVNFHPRYV 329
Query: 180 LRNSFYQFQADHAIPDLEKQAKVLEEE--RDSMVIEEEDSLKNYYNLLQQYKSLKKD 234
Q Q H+ L AK + + S I D L Y L Q SLK D
Sbjct: 330 DNKPIMQLQ--HSSWMLSVIAKRCNSKLAQQSCRIPS-DELSFYLTLSQS--SLKAD 381
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 277/651 (42%), Positives = 409/651 (62%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
+D +D EK +++++ SA+ LS +D+KLPQ+ NILPLL+RGIGVHHSGL+PILKE IE
Sbjct: 396 MDFNKDHEKGMVKSVYESAIAQLSPEDQKLPQILNILPLLRRGIGVHHSGLMPILKETIE 455
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
ILF EGL+K LFATETFS+GLNMPA+TVVFT+ RKFDG R+I+SGEYIQM+GRAGRRG
Sbjct: 456 ILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRG 515
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNS 183
D+RG ILMVD M AK ++KG+ D LNS F L+YNM+LN +R E + ++ NS
Sbjct: 516 KDDRGTVILMVDSAMSADDAKQIIKGATDPLNSQFRLTYNMVLNLMRVEGMAVSWIINNS 575
Query: 184 FYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPK 243
F+QFQ+ IP+++K+ +E + S E+ ++ +L Q ++ ++ + I PK
Sbjct: 576 FHQFQSYAKIPEIDKKCVQVERKIASFNFPWENEMRTLVDLQDQLEATRQRIIQIQREPK 635
Query: 244 YCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSN 303
Y + FL GR ++ GD D + WG++ +F+K + DD N + +
Sbjct: 636 YIVGFLHAGRLFKVKS--GD--------RDFK--WGILNQFKKEQN--PDDRNDQIYLCD 681
Query: 304 YTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL-LPL 362
+ I T D TL + V + I +I +S+ RL +P D+ P
Sbjct: 682 MMIAINTEGRF--DPTNPATLVPGFDLPKRRWIRVPMTIDRITAISAVRLKVPADIDKPD 739
Query: 363 -QTR-ENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISK 419
Q R + M+ + ++ R + +PL DP +M I++ ++L+ R ++LE + H ++K
Sbjct: 740 GQMRLDGMMAAATK---RFGNQIPLLDPIQDMEIKTVEMKELIAREKSLEGRLETHSMTK 796
Query: 420 SPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVE 479
++ K KQ+ ++ ++K + +S +EL RKRVLRRLGY +DD +
Sbjct: 797 RDNMKDLKKQFEQKQDAVKELNALKAERKSVQSTLHLEELNNRKRVLRRLGYLGNDDALV 856
Query: 480 LKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELL 539
LKG VACE+S+++EL LTE++ G+ + V + +LLSCFV+Q+K A K EL+
Sbjct: 857 LKGSVACELSASDELILTEMLLKGIFNTLDVAQTAALLSCFVFQDKCA-APKLATELQTC 915
Query: 540 FTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEG 599
++L + AR VAKV ECK+++ + +V+SF P +M+ VY W G+ F EI++ T VFEG
Sbjct: 916 LSELHEQARNVAKVSNECKMEVMEDKYVSSFNPGLMDVVYQWVNGATFSEIVKTTDVFEG 975
Query: 600 SLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
S+IR +RRLEEVL+++I AAK++ ELE KFE+A +KRDIVFAASLYL
Sbjct: 976 SIIRTLRRLEEVLREMINAAKALANKELEQKFEDARKNLKRDIVFAASLYL 1026
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 262/657 (39%), Positives = 414/657 (63%)
Query: 3 KLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVI 62
KLDL + + K + IF SA++ LS++D+ L Q + LL RGIG+HHSGLLPILKE++
Sbjct: 392 KLDLNDTENKELVTEIFDSAINQLSEEDRGLRQFEEMRSLLLRGIGIHHSGLLPILKELV 451
Query: 63 EILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRR 122
EILFQEGL++ LFATETFSIGLNMPA+TV+FT +KF G+ FRW++SGEY+QMSGRAGRR
Sbjct: 452 EILFQEGLVRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRR 511
Query: 123 GIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRN 182
GID +G+ I+++D ++ A+ ++ G AD LNSAFHLSY M+LN +R EE SPE++L+
Sbjct: 512 GIDTKGLSIVILDQSIDEQAARCLMNGQADVLNSAFHLSYGMILNLMRIEEISPEDILKK 571
Query: 183 SFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSP 242
SFYQFQ ++P ++++ L+ E S+ I E ++K +++L Q + ++++ ++ P
Sbjct: 572 SFYQFQNMESLPLIKEELMQLKNEETSINIPNETAVKEFHDLKLQLEKYGEEIQKVMTHP 631
Query: 243 KYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKK--PE 300
CLP+LQ GR + I+ G P WGV++ +K ++ + ++ P
Sbjct: 632 DNCLPYLQSGRLIQIKL--GGIIFP----------WGVLVNV--IKREFDPNTREQVAPH 677
Query: 301 DSNYTVNILTRCVVSKDGAGKKTLK--IVPLKESGEPL--VVSVPISQIIKLSSARLPMP 356
++ Y +++L + S + K +VP + + PL +VSV ++ + +SS R+ MP
Sbjct: 678 ET-YVLDVLLP-ISSNSMSNHKVNPSILVPPRPNETPLYEIVSVLLTAVCNISSIRIYMP 735
Query: 357 KDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALE-SLFDK 414
++L +++ + +E + +P LDP +M I SS+ +R++E LE LFD
Sbjct: 736 RELNSNESKLRAYRRVNEVI-EEFKEIPYLDPLEHMHIESSTLSLSLRKLEILEPKLFDS 794
Query: 415 HEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATS 474
K + K L A+IK I ++ ++ + ELK R+RVLRRLG+ T
Sbjct: 795 -PYYKDSKHRAEYHEFRKKLNLRAQIKDISTKITNTEAIIQLRELKIRQRVLRRLGFCTL 853
Query: 475 DDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDAS-KPR 533
++V+++KG+VACEI+S +EL L ELIF G + EE+ + LSCFV+++K + ++ +
Sbjct: 854 ENVIDIKGRVACEITSGDELLLVELIFQGFFNQMPPEEIAAALSCFVYEDKSEVSTLNLK 913
Query: 534 EELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEI 593
E + ++ + + A+R+A V LE K+Q + +++ F+PDIME V W G+ F EI +
Sbjct: 914 EPFKKMYLTIIEAAKRIATVSLESKLQFNESDYLHQFKPDIMEPVSLWINGASFQEICIV 973
Query: 594 TPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+ ++EGS++R RRL+E+L+QL AA +G EL+ K K+ RDI+F+ASLYL
Sbjct: 974 SKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNELKEKSVLTEQKLHRDIIFSASLYL 1030
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 518 (187.4 bits), Expect = 9.9e-84, Sum P(2) = 9.9e-84
Identities = 110/265 (41%), Positives = 163/265 (61%)
Query: 5 DLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEI 64
DLT EK I A L D+ LPQV + LL RGIGVHH+GLLPI+KEV+E+
Sbjct: 673 DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEM 732
Query: 65 LFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGI 124
LF G+IK LF+TETF++G+N PA+TVVF +RKFDG +FR + GEY QM+GRAGRRG+
Sbjct: 733 LFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGL 792
Query: 125 DERGICILMVDDKM-EPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNS 183
D+ G ++M D++ + S + ++ GSA L S F L+Y M+L+ +R EE E++L+ S
Sbjct: 793 DKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRS 852
Query: 184 FYQFQADHAIPDLEKQAKVLEEERDSMVIE---EEDSLKNYYNLLQQYKSLKKDVRDIVF 240
F +F A +P+ ++Q +++ + IE E ++++YY++ + + + V
Sbjct: 853 FAEFHAQKKLPE-KQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVM 911
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDN 265
Y FL GR V ++ G DN
Sbjct: 912 QSPYAQSFLVQGRVVVMKSGMGIDN 936
Score = 364 (133.2 bits), Expect = 9.9e-84, Sum P(2) = 9.9e-84
Identities = 92/270 (34%), Positives = 152/270 (56%)
Query: 385 LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSP---LIEQKLKVLHMKQELTAKIK 441
LDP ++ ++ + +LV +L K ++K +E+ +K+ ++ +K
Sbjct: 1079 LDPVKDLKLKDA---ELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLK 1135
Query: 442 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 501
++ QM S L + R VL+ +G D VV++KG+VACE++S EEL T +F
Sbjct: 1136 DLEFQM-SDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLF 1194
Query: 502 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 561
++++ EE V+++S FV+Q+K A +L +L DTA R+ ++Q + +QI
Sbjct: 1195 ENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQI 1254
Query: 562 DVEGFVN-SFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAK 620
D E + + + ++E VY WAKG+ F EI E+T V EG ++R I RL+E ++ AA
Sbjct: 1255 DPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAA 1314
Query: 621 SIGETELEAKFEEAVSKIKRDIVFAASLYL 650
+G + L K + A + IKRDIVFAASLY+
Sbjct: 1315 IMGNSALHKKMDAASNAIKRDIVFAASLYV 1344
Score = 41 (19.5 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 213 EEEDSLKNYYNLLQQ---YKSLKKDVRDIVFSPKYCLPFLQPGRF 254
E +D+L + + + K K+ ++ + KY +P L+P +F
Sbjct: 32 ERDDALNSLPDFVSPPAFAKETKESIKKHI-EEKYLIPRLEPDQF 75
Score = 40 (19.1 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 32/144 (22%), Positives = 56/144 (38%)
Query: 327 VPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLD 386
V L E G S + Q++ L S P L P+ ++ LK +E + L
Sbjct: 1047 VRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALDPV--KDLKLKD-AELVETYYKWTNLL 1103
Query: 387 PEANMG-----IRSSSYQKLVRRIEA-------LESLFDKHEISKSPLIEQKLKVLH--- 431
+ +M ++ + KL R I+ LE + + P + ++ VL
Sbjct: 1104 QKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIG 1163
Query: 432 -MKQELTAKIKS-IKRQMRSSTEL 453
+ +L +IK + +M S EL
Sbjct: 1164 CIDDDLVVQIKGRVACEMNSGEEL 1187
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 572 (206.4 bits), Expect = 2.7e-81, Sum P(2) = 2.7e-81
Identities = 130/317 (41%), Positives = 193/317 (60%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M K+DLT D EK I+ ++ +A+ +L+DDD+ LPQV ILPLL RGIG+HH GLLPI+KE
Sbjct: 527 MHKIDLTSDTEKEVIKELYENAIRILADDDRSLPQVQFILPLLLRGIGIHHGGLLPIIKE 586
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
+IEI+FQE L+K LF+TETFS+G+NMPAKTVVFT++ KFDG + R I+SGEYIQM+GRAG
Sbjct: 587 IIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLTKFDGLEKRLITSGEYIQMAGRAG 646
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI I+M+D + A + G A+ L S FHL YNM+LN +R E +PE ++
Sbjct: 647 RRGLDDRGIVIIMLDTPLHWREAHKLFVGEANRLVSQFHLGYNMILNLLRIEGITPEFMI 706
Query: 181 RNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVF 240
SF Q+Q + K+L +++ +EE +K +N L ++ D +
Sbjct: 707 ERSFIQYQMKKNLSQ-----KILAKKK----VEEH--IKQIFNHLT---NIHLDENNNEI 752
Query: 241 SPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE 300
+ L + + I+ + S +D V++ +K K + E+ +
Sbjct: 753 TKDELLTKIMYNNYEQIKNNQNLGTSSELKIKDTSSNDEVILNADKHKEIKEEFKEEYTN 812
Query: 301 DSNYTVNILTRCVVSKD 317
S+Y+ V++K+
Sbjct: 813 YSSYSTQHYNENVINKE 829
Score = 286 (105.7 bits), Expect = 2.7e-81, Sum P(2) = 2.7e-81
Identities = 71/253 (28%), Positives = 125/253 (49%)
Query: 401 LVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELT--AKIKSIKRQMRSSTELAFKDE 458
L IE + K E+ ++ + L + + L K IK S TE +
Sbjct: 1098 LESNIEKCRFIVLKKELKNMLVLLESLNYIEVSYNLENLKNEKDIKTIENSITEHIKNER 1157
Query: 459 LKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLS 518
+ K + + + VV +KG++A I S +EL ++EL F+ + + + LS
Sbjct: 1158 IMNIKNETYKNNHEEKNYVVTMKGQIASAILSVDELVISELFFSNFFSKYNYDYICAFLS 1217
Query: 519 CFVWQEKLQDASKPREELELL-FTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEA 577
CFV+ E + + + + Q+ TA VA EC + I+++ +++ F+ IM
Sbjct: 1218 CFVYDESTSKEITINDPILVEGYQQIIKTANHVATKMNECGMNINLKDYIDKFKSAIMPI 1277
Query: 578 VYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSK 637
WA+G F EI+ + ++EGS+IR +RRL+E+++Q+I A + I + A +K
Sbjct: 1278 ALLWARGHSFVEILSDSQIYEGSIIRTLRRLDELIRQMICAFRGINNDSMCETLTLATNK 1337
Query: 638 IKRDIVFAASLYL 650
++R I F+ SLYL
Sbjct: 1338 LRRGIPFSPSLYL 1350
Score = 80 (33.2 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 36/180 (20%), Positives = 83/180 (46%)
Query: 337 VVSVPISQIIKLSSARLPMPK--DLLPLQTRENMLKSTSEFLA--RNASGLPLDPEANMG 392
V+S I + +LS+ L + K D + EN+ + + + +P+ MG
Sbjct: 988 VISFNIKCVYQLSAVVLSIDKPFDKKNEEQIENIKTKYNTMVTCLKGEKNIPVINPNQMG 1047
Query: 393 IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTE 452
I++ ++ +V+ ++ E++ +K+++ + + + ++ L + ++ +
Sbjct: 1048 IKNETFISIVKNLKFHENIINKNKLLNNKNLNKYYQMYSKYVALQCEKNILESNIEKCRF 1107
Query: 453 LAFKDELKARKRVLRRLGYA-TSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVE 511
+ K ELK +L L Y S ++ LK + +I + E ++TE I N + ++K E
Sbjct: 1108 IVLKKELKNMLVLLESLNYIEVSYNLENLKNEK--DIKTIEN-SITEHIKNERIMNIKNE 1164
Score = 51 (23.0 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 218 LKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCI 257
+ N+Y + Q+ + + R I+ K+ P+L GR + I
Sbjct: 840 ISNFYTMKQKLIDVGETYRYILTMKKHITPYLSLGRLLYI 879
Score = 38 (18.4 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 353 LPMPKDLLPLQTRENMLK---STSEF 375
LP+ K+++ + +E++LK ST F
Sbjct: 581 LPIIKEIIEIMFQESLLKVLFSTETF 606
Score = 37 (18.1 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 257 IECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVN 307
+ C +G+ N P + + I K +E+ NK +N +N
Sbjct: 1029 VTCLKGEKNIPVINPNQMGIKNETFISIVKNLKFHENIINKNKLLNNKNLN 1079
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 819 (293.4 bits), Expect = 5.0e-81, P = 5.0e-81
Identities = 221/663 (33%), Positives = 347/663 (52%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + ++ L D++LPQ+ + LLKRGIGVHHSG+LPILKE
Sbjct: 595 LTSLDLTTSIEKSEIHSFLQKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKE 654
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
VIE+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEYIQM+GRAG
Sbjct: 655 VIEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAG 714
Query: 121 RRGIDERGICILMVDDKM-EPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENL 179
RRG+D G I++ + + M+ G L+S F L+Y M+LN +R E ++
Sbjct: 715 RRGLDATGTVIILCKAGVHDMGELHSMMLGKPTVLHSQFRLTYTMILNLLRVEALRVTDM 774
Query: 180 LRNSFYQFQADHAIPDLEKQAKVLEEERDSMV-IEEEDSLKN---YYNLLQQYKSLKKDV 235
++ SF + D EK+ L S+ ++ E L + YY+ + + + +
Sbjct: 775 MKRSFSENHRDTQAH--EKRISELRNTLSSLPPLDTEGQLSDLLSYYHTITELHITTQSL 832
Query: 236 RDIVFSPKYCLPFLQPGRFVCIECTRGDDNSP---SFSTEDHQVTWGVVIEFEKVKGVYE 292
+ V L L GR V + ++ ++ S++ T+ +I EK G
Sbjct: 833 QQAVLESVNGLKALSVGRVVIVNNSQHHNSLGVILQVSSDAVNRTFTALIICEK--G--N 888
Query: 293 DDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPI--SQIIKLSS 350
++A + + + I ++ + +G T++ + L++ ++ + +II +
Sbjct: 889 EEAASDEQSNKVALPIYSKTLFIPEGPCSHTVQKLKLQDISAITTKALKVIPERIIDNYN 948
Query: 351 ARLPMPKDLL--PLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEA 407
RL P+ L P Q + N G+ LDP ++ ++ + V R
Sbjct: 949 KRL-QPRFRLDPPGQAISTATQELLRLAEANMGGMTVLDPVNDLHLKGVDVVEGVMRQRV 1007
Query: 408 LE-SLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVL 466
L+ SL D H I SP ++ + + + ++ + + S L E R +VL
Sbjct: 1008 LQDSLKDFHCIH-SPTFSEQFTRVQERMSVQEELDKLLFLV-SDQSLTLLPEYHQRIKVL 1065
Query: 467 RRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKL 526
L Y S V+LKG+VAC+ISS EL LTEL+F L + EE +LLSC V+ +
Sbjct: 1066 EALQYVDSSGAVQLKGRVACQISS-HELLLTELLFENTLSPLAPEESAALLSCLVFTQNT 1124
Query: 527 QDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSK 586
Q L+ Q+ A+R+ +Q +C + E FV F+ + E VY WA+G
Sbjct: 1125 QIEPHITNTLQEGINQVLAVAQRIGDLQRDCGIAQTAEDFVAQFKFGLTEVVYCWARGMP 1184
Query: 587 FYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAA 646
F EI ++T V EG+++R I+RL+EVL+++ AA+ +G++ L +K E A I+RDIVF A
Sbjct: 1185 FAEIAQLTDVQEGTIVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTA 1244
Query: 647 SLY 649
SLY
Sbjct: 1245 SLY 1247
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 813 (291.2 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 228/668 (34%), Positives = 353/668 (52%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ +D EK I A+ L +D++LPQ+ I +L RGI VHH GLLPI+KE
Sbjct: 599 LRSVDFNNAREKSEIHMFIDRAVGRLKKEDRELPQILKIREMLGRGIAVHHGGLLPIVKE 658
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF + L+K LFATETF++GLN+P +TV+F+++RK DG FR + GE+ QMSGRAG
Sbjct: 659 CIEILFAKSLVKVLFATETFAMGLNLPTRTVIFSSMRKHDGRSFRNLLPGEFTQMSGRAG 718
Query: 121 RRGIDERGICILMV-DDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENL 179
RRG+D+ G I+M DD + P+ K ++ G+ L+S F L+Y+M+LN +R E E +
Sbjct: 719 RRGLDKTGTVIVMAYDDPLSPTDFKEVVLGTPTKLSSQFRLTYSMILNLLRIEALKVEEM 778
Query: 180 LRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIE--EEDSLKNYY---NLLQQYKSLKKD 234
+++SF + +P+ +K+ ++++ S I + SL+ NLL +Y++L +
Sbjct: 779 IKHSFSENSTQVLLPENQKRYDEIKKQLQSSTITPCSKCSLEGTEETCNLLTEYENLYGE 838
Query: 235 -VRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVI-EFEKVKGVYE 292
V DI SP L+ GR VC + F + +V+ F+ K YE
Sbjct: 839 CVVDIHKSPVLKSQLLRVGRLVCFRDVNHNGARMGFVVKSDSANNAIVLLTFDHGKD-YE 897
Query: 293 DDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSAR 352
+ K Y + + +D K KI K SG VV VP I +
Sbjct: 898 EAIEK------YKLPYIP----IRDYITKNFPKI---KFSGRLRVVLVPYENICFIGRYS 944
Query: 353 LPMPKDLLPLQTRENMLKSTSE---FLARNASGLPLDPEANMGIRSSSYQKLVRRIEALE 409
L + + + ++ ++ SE L + + + A R S L +E +
Sbjct: 945 LKTSVNSI-INNEKSAVQEASEQIQILTKYQNSF--EELAFKFTRQLSLHDLT--VEK-D 998
Query: 410 SLFDKHEISKS---PLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVL 466
L +K + SK+ P Q + L+ +++ ++R + S L + + R +VL
Sbjct: 999 QLLEKLKSSKAYVCPNFRQHYVEYLDRYLLSQEVEKLERLI-SDENLELLPDYEQRLQVL 1057
Query: 467 RRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKL 526
+GY V LKG+VACE++S EL +TEL+ N L D + E+V+LLSCFV++ +
Sbjct: 1058 EAMGYIDEQHNVVLKGRVACEVNSGWELIITELVLNNFLGDFEPAEIVALLSCFVYEGRT 1117
Query: 527 QDASKP--REELELLFTQLQDTARRVAKVQLECKVQI--DVEGFVNSFRPDIMEAVYAWA 582
Q+ P LE ++ + A ++ KV +E +V + + E FV S R + VY WA
Sbjct: 1118 QEEEPPLITPRLEKGKAKILEIAEKLLKVYVEKQVSLTSEEEDFVESKRFALANVVYEWA 1177
Query: 583 KGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDI 642
G F EIM+I+ EG+++R I RL+E+ +++ AA IG++ L K EA KIKRDI
Sbjct: 1178 NGLSFNEIMQISVEAEGTIVRVITRLDEICREVKNAALIIGDSTLHLKMVEAQEKIKRDI 1237
Query: 643 VFAASLYL 650
VF ASLYL
Sbjct: 1238 VFCASLYL 1245
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 428 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 487
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 488 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 547
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 548 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 606
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 607 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 663
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 664 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 722
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 723 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 782
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 783 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 842
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 843 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 901
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 902 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 960
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 961 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 1020
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 1021 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1080
Query: 644 FAASLY 649
FAASLY
Sbjct: 1081 FAASLY 1086
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 220 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 279
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 280 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 339
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 340 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 398
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 399 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 455
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 456 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 514
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 515 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 574
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 575 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 634
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 635 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 693
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 694 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 752
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 753 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 812
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 813 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 872
Query: 644 FAASLY 649
FAASLY
Sbjct: 873 FAASLY 878
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 393 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 452
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 453 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 512
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 513 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 571
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 572 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 628
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 629 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 687
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 688 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 747
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 748 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 807
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 808 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 866
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 867 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 925
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 926 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 985
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 986 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1045
Query: 644 FAASLY 649
FAASLY
Sbjct: 1046 FAASLY 1051
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 428 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 487
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 488 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 547
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 548 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 606
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 607 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 663
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 664 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 722
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 723 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 782
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 783 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 842
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 843 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 901
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 902 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 960
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 961 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 1020
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 1021 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1080
Query: 644 FAASLY 649
FAASLY
Sbjct: 1081 FAASLY 1086
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 393 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 452
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 453 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 512
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 513 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 571
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 572 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 628
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 629 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 687
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 688 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 747
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 748 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 807
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 808 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 866
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 867 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 925
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 926 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 985
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 986 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1045
Query: 644 FAASLY 649
FAASLY
Sbjct: 1046 FAASLY 1051
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 791 (283.5 bits), Expect = 5.8e-78, P = 5.8e-78
Identities = 220/666 (33%), Positives = 343/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 586 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKE 645
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 646 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 705
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 706 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 764
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE D V + L YY+ ++
Sbjct: 765 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP-D--VTGQLVDLPEYYSWGEELTET 821
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKV--KG 289
+ ++ + L L GR V ++ +R N+ + + V + K
Sbjct: 822 RSLIQRRIMESVNGLKSLSVGRVVVVK-SREHHNALGVILQVSSTSTSRVFTTLVLCDKP 880
Query: 290 VYEDDANKKPE--DSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
+ ED K P D Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 881 MSEDPQQKGPASPDVPYPDDLVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKI 940
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K P ++ + +G P LDP ++ ++ S +
Sbjct: 941 LEDFSKRQQPKFKKDPPSAAVTTAVQELLRLAQAHLAGPPTLDPVNDLQLKDVSVVEGGL 1000
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 1001 RARKLEELIRGAQCVHSPRFPAQYVKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 1059
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 1060 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQ 1118
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ ++Q A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 1119 SPGDPGDQLPSTLKQGVERVQAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 1178
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 1179 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1238
Query: 644 FAASLY 649
FAASLY
Sbjct: 1239 FAASLY 1244
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 786 (281.7 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 218/672 (32%), Positives = 348/672 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL+RG+GVHHSG+LPILKE
Sbjct: 545 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKE 604
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 605 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 664
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 665 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 723
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ DL K+ LEE D V + L YY+ ++
Sbjct: 724 MMKRSFSEFPSRKDSKAHEQALADLTKRLGALEEP-D--VTGQLADLPEYYSWAEELTET 780
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ N+ S+ + ++ +K
Sbjct: 781 RNMIQRRIMESVNGLKSLSVGRVVVVK-NEEHHNALGVILQVSSNSTSRVFTTLVLCDK- 838
Query: 288 KGVYEDDANKKPE--DSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESGEPLVVSVPISQ 344
V E+ +K P D + +++ + +G + T+ K+ P G+ +S + +
Sbjct: 839 PAVSENPRDKGPATPDVPHPDDLVGFKLFLPEGPCEHTVAKLQP----GDVAAISTKVLR 894
Query: 345 II--KLSS--ARLPMPKDLL--PLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSS 397
+ K+S ++ PK PL ++ +G P LDP ++ ++ +
Sbjct: 895 VNGEKISEDFSKRQQPKFRKDPPLAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVA 954
Query: 398 YQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKD 457
+ R LE L + SP + L + ++ +++ + R + S L
Sbjct: 955 VVEGGLRARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERL-RFLLSDQSLLLLP 1013
Query: 458 ELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLL 517
E R VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LL
Sbjct: 1014 EYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALL 1072
Query: 518 SCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEA 577
S V Q + L+ +++ A+R+ +VQ+ C + VE FV ++E
Sbjct: 1073 SGLVCQSPGDPGDQLPSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEV 1132
Query: 578 VYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSK 637
VY WA+G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A +
Sbjct: 1133 VYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATL 1192
Query: 638 IKRDIVFAASLY 649
++RDIVFAASLY
Sbjct: 1193 LRRDIVFAASLY 1204
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 786 (281.7 bits), Expect = 2.0e-77, P = 2.0e-77
Identities = 218/672 (32%), Positives = 348/672 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL+RG+GVHHSG+LPILKE
Sbjct: 580 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKE 639
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 640 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 699
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 700 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 758
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ DL K+ LEE D V + L YY+ ++
Sbjct: 759 MMKRSFSEFPSRKDSKAHEQALADLTKRLGALEEP-D--VTGQLADLPEYYSWAEELTET 815
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ N+ S+ + ++ +K
Sbjct: 816 RNMIQRRIMESVNGLKSLSVGRVVVVK-NEEHHNALGVILQVSSNSTSRVFTTLVLCDK- 873
Query: 288 KGVYEDDANKKPE--DSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESGEPLVVSVPISQ 344
V E+ +K P D + +++ + +G + T+ K+ P G+ +S + +
Sbjct: 874 PAVSENPRDKGPATPDVPHPDDLVGFKLFLPEGPCEHTVAKLQP----GDVAAISTKVLR 929
Query: 345 II--KLSS--ARLPMPKDLL--PLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSS 397
+ K+S ++ PK PL ++ +G P LDP ++ ++ +
Sbjct: 930 VNGEKISEDFSKRQQPKFRKDPPLAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVA 989
Query: 398 YQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKD 457
+ R LE L + SP + L + ++ +++ + R + S L
Sbjct: 990 VVEGGLRARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERL-RFLLSDQSLLLLP 1048
Query: 458 ELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLL 517
E R VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LL
Sbjct: 1049 EYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALL 1107
Query: 518 SCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEA 577
S V Q + L+ +++ A+R+ +VQ+ C + VE FV ++E
Sbjct: 1108 SGLVCQSPGDPGDQLPSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEV 1167
Query: 578 VYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSK 637
VY WA+G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A +
Sbjct: 1168 VYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATL 1227
Query: 638 IKRDIVFAASLY 649
++RDIVFAASLY
Sbjct: 1228 LRRDIVFAASLY 1239
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 785 (281.4 bits), Expect = 2.6e-77, P = 2.6e-77
Identities = 220/670 (32%), Positives = 344/670 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 586 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKE 645
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 646 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 705
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 706 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 764
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEE-ERDSMVIEEEDSLKNYYNLLQQYKS 230
+++ SF +F + + A+ +L K+ LEE + +++ L YY ++
Sbjct: 765 MMKRSFSEFPSRKDSKAHEQALDELTKRLGALEEPDTTGQLVD----LSEYYGWGEELTE 820
Query: 231 LKKDVRDIVFSPKYCLPFLQPGRFVCIEC-----TRGDDNSPSFSTEDHQVTWGVVIEFE 285
+ ++ + L L GR V ++ T G S ++ T V+ +
Sbjct: 821 TRSLIQRRIMESVNGLKSLSAGRVVVVKNQEYHNTLGVILQVSSNSASRVFTTLVLCD-- 878
Query: 286 KVKGVYEDDANKKPE--DSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVP 341
K V ED + P D Y +++ + +G T+ K+ P + V+ V
Sbjct: 879 --KPVSEDPQERAPATPDVPYPDDLVGFKLFLPEGPCDHTVAKLQPGDVATITTKVLRVN 936
Query: 342 ISQIIK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQ 399
+I++ S + P K P+ ++ +G P LDP ++ ++ S
Sbjct: 937 GEKILEDFSKRQQPKFKKDPPIAAVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVV 996
Query: 400 KLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDEL 459
+ R LE L + SP + L + ++ +++ + R + S L E
Sbjct: 997 EGGLRARKLEELIWGAQCVHSPRFSAQYVKLRERMQIQKEMERL-RFLLSDQSLLLLPEY 1055
Query: 460 KARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSC 519
R VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS
Sbjct: 1056 HQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSG 1114
Query: 520 FVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVY 579
V Q + L+ +++ ARR+ +VQ+ C + VE FV ++E VY
Sbjct: 1115 LVCQSPGDPGEQLPSTLKQGVERVRAVARRIGEVQVACGLNQTVEEFVGELNFGLVEVVY 1174
Query: 580 AWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIK 639
WA+G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++
Sbjct: 1175 EWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLR 1234
Query: 640 RDIVFAASLY 649
RDIVFAASLY
Sbjct: 1235 RDIVFAASLY 1244
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 785 (281.4 bits), Expect = 2.6e-77, P = 2.6e-77
Identities = 215/666 (32%), Positives = 341/666 (51%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 586 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKE 645
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 646 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 705
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 706 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 764
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE M + D L YY+ ++
Sbjct: 765 MMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP--DMTGQLVD-LPEYYSWGEELTET 821
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSF----STEDHQVTWGVVIEFEKV 287
+ ++ + L L GR V ++ + N+ S+ + ++ +K
Sbjct: 822 QHMIQRRIMESVNGLKSLSAGRVVVVK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKP 880
Query: 288 KGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQI 345
D + Y +++ + +G T+ K+ P + V+ V +I
Sbjct: 881 LSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKI 940
Query: 346 IK-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVR 403
++ S + P K PL ++ + +G P LDP ++ ++ S +
Sbjct: 941 LEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGL 1000
Query: 404 RIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARK 463
R LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 1001 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRV 1059
Query: 464 RVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQ 523
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 1060 EVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQ 1118
Query: 524 EKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAK 583
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+
Sbjct: 1119 SPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWAR 1178
Query: 584 GSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIV 643
G F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIV
Sbjct: 1179 GMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1238
Query: 644 FAASLY 649
FAASLY
Sbjct: 1239 FAASLY 1244
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 783 (280.7 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 216/665 (32%), Positives = 336/665 (50%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ LDLT EK I + L D++LPQV ++ LL RG+GVHHSG+LPILKE
Sbjct: 586 LTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKE 645
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LF GL+K LFATETF++G+NMPA+TVVF ++RK DG FR + GEY+QM+GRAG
Sbjct: 646 IVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAG 705
Query: 121 RRGIDERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G IL+ ++ P A + M+ G L S F L+Y M+LN +R + E+
Sbjct: 706 RRGLDPTGTVILLCKGRV-PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVED 764
Query: 179 LLRNSFYQFQA-------DHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
+++ SF +F + + A+ +L K+ LEE V + L YY+ ++
Sbjct: 765 MMKRSFSEFPSRKDSKAHEQALAELTKKLGALEEPE---VTGQLVDLPEYYSWGEELTET 821
Query: 232 KKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKV-KGV 290
+ ++ + L L GR V ++ + T V K V
Sbjct: 822 RSQIQHRIIESVNGLKSLSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPV 881
Query: 291 YEDDANKKPE--DSNYTVNILTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQII 346
ED + P D Y +++ + +G T+ K+ P + V+ + +I+
Sbjct: 882 SEDPRERGPASPDVPYPDDLVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRLNGDKIL 941
Query: 347 K-LSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRR 404
+ S + P K P ++ + +G P LDP ++ ++ S + R
Sbjct: 942 EDFSKRQQPKFKKDPPSAAVTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLR 1001
Query: 405 IEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKR 464
LE L + SP + L + ++ +++ + R + S L E R
Sbjct: 1002 ARKLEELIRGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVE 1060
Query: 465 VLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQE 524
VLR LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 1061 VLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQS 1119
Query: 525 KLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKG 584
+ L+ +++ A+R+ +VQ C + VE FV ++E VY WA+G
Sbjct: 1120 PGDPGDQLPSTLKQGVERVRTVAKRIGEVQAACGLNQTVEEFVGELNFGLVEVVYEWARG 1179
Query: 585 SKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVF 644
F E+ ++ EG ++R I+RL E+ + L AA+ +GE L AK E A + ++RDIVF
Sbjct: 1180 MPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVF 1239
Query: 645 AASLY 649
AASLY
Sbjct: 1240 AASLY 1244
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 155/321 (48%), Positives = 220/321 (68%)
Query: 331 ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEA 389
E GE VV V + + +S+ RL +PKDL P+ R+++LKS E R G+PL DP
Sbjct: 17 EKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPID 76
Query: 390 NMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRS 449
+MGI+ +K+++++EA E H + P +E + K ++ IKS KR+++
Sbjct: 77 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 136
Query: 450 STELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVK 509
+ + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++FNG+ D+
Sbjct: 137 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 196
Query: 510 VEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNS 569
E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++ID E +++S
Sbjct: 197 SEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSS 256
Query: 570 FRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEA 629
F+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE
Sbjct: 257 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 316
Query: 630 KFEEAVSKIKRDIVFAASLYL 650
KF E ++KIKRDIVFAASLYL
Sbjct: 317 KFAEGITKIKRDIVFAASLYL 337
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 468 (169.8 bits), Expect = 7.7e-75, Sum P(2) = 7.7e-75
Identities = 99/239 (41%), Positives = 146/239 (61%)
Query: 5 DLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEI 64
DL EK + + A+ L +D+ LPQ+ + +L RG+ VHH GLLPI+KE++EI
Sbjct: 574 DLNNHQEKSEVHVVIEKAVARLKKEDRLLPQIGRMREMLSRGLAVHHGGLLPIIKEIVEI 633
Query: 65 LFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGI 124
LFQ GL+K LFATETF++G+NMPAK+VVF+ +K DG FR + GEY Q SGRAGRRG+
Sbjct: 634 LFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGL 693
Query: 125 DERGICILMVDDKMEPSTAKM--MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRN 182
D G I++ ++ P TA + M+ G + L S F L+YNM+LN +R E E++++
Sbjct: 694 DVTGTVIILSRSEL-PDTASLRHMIMGPSSKLISQFRLTYNMILNLLRVETLRIEDMIKR 752
Query: 183 SFYQFQADHAIPDLEKQAKVLEEERDSMVIEEED-SLKNYYNLLQQYKSLKKDVRDIVF 240
SF + +P E++ K EE+ ++ E D LK + L +S K+ + + F
Sbjct: 753 SFSENVNQTLVPQHEEKIKSFEEKLSALKKEMSDVDLKEIKSCLLSSESFKEYTKKMHF 811
Score = 351 (128.6 bits), Expect = 7.7e-75, Sum P(2) = 7.7e-75
Identities = 93/285 (32%), Positives = 149/285 (52%)
Query: 370 KSTSEFLA-RNASGLPLDPEANMG-IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKL 427
K + +F + + S L L E N +R + + + L++ + I +P
Sbjct: 931 KLSEQFASIKKFSDL-LFEEVNWSKVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHF 989
Query: 428 KVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACE 487
+ + + EL + I ++ + S L + + R +VL+ LGY ++ V LKG+VACE
Sbjct: 990 ALAYQEYELESNIDNLSSYI-SDQNLELLPDYEQRIKVLQELGYIDAERTVLLKGRVACE 1048
Query: 488 ISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTA 547
I+S EL LTELI L D EE ++LLS FV+ EK + L+ + A
Sbjct: 1049 INSTSELVLTELILENSLADFSCEETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVA 1108
Query: 548 RRVAKVQLECKVQIDVEG--FVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAI 605
+V ++Q +V EG F + R +ME Y WA+G F I ++T V EGS++R I
Sbjct: 1109 EKVNQIQEHYQVLYFNEGNDFESQPRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTI 1168
Query: 606 RRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
RL+EVL++ AA+ +G++ + K EE + I+R+IVF SLY+
Sbjct: 1169 IRLDEVLRECRGAARVVGDSSMYTKMEECQNLIRRNIVFCPSLYM 1213
Score = 42 (19.8 bits), Expect = 9.9e-28, Sum P(2) = 9.9e-28
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 257 IECTRGDDN-SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVS 315
+E R +D SFS +Q V EK+K E + K E S+ + + C++S
Sbjct: 741 VETLRIEDMIKRSFSENVNQTL--VPQHEEKIKSFEEKLSALKKEMSDVDLKEIKSCLLS 798
Query: 316 KDGAGKKTLKI 326
+ + T K+
Sbjct: 799 SESFKEYTKKM 809
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 435 (158.2 bits), Expect = 9.7e-75, Sum P(2) = 9.7e-75
Identities = 91/207 (43%), Positives = 128/207 (61%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
++ D EK I ++ L +D+ LPQ+ + LL RGI VHH GLLPI+KE
Sbjct: 647 LSNQDFCNASEKSLIHITIEKSLTRLKQEDRTLPQILRLRELLSRGIAVHHGGLLPIMKE 706
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++EILF + L+K LFATETF++GLN+P +TVVF+ RK DG FR + GEY QM+GRAG
Sbjct: 707 IVEILFAKTLVKVLFATETFAMGLNLPTRTVVFSGFRKHDGKGFRDLLPGEYTQMAGRAG 766
Query: 121 RRGIDERGICILMVDDKME--PSTA-KMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPE 177
RRG+D G I++ K E P+ A + M+ G L S F L+YNM+LN +R E E
Sbjct: 767 RRGLDNVGYVIVVNSGKDEAPPAGALRKMILGDPTKLRSQFRLTYNMILNLLRVEALKIE 826
Query: 178 NLLRNSFYQFQADHAIPDLEKQAKVLE 204
+++ SF + +P+ EKQ ++ E
Sbjct: 827 EMIKRSFSENATQALLPEHEKQVQISE 853
Score = 396 (144.5 bits), Expect = 9.7e-75, Sum P(2) = 9.7e-75
Identities = 105/334 (31%), Positives = 178/334 (53%)
Query: 324 LKIVPLKESGEPL-VVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 382
L +P + + L V +PI+ I +++ + + L ++ ++ + L++ S
Sbjct: 961 LNPLPTRAADMTLKVFKIPIADIECVTNTIVKLSGPTWYLNIKKEAIRFADKELSKLCSS 1020
Query: 383 --LPLDPEANMG-IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAK 439
P+ E + I+ + ++ + ++ + K P + ++ + ++
Sbjct: 1021 WTTPVWDELDWARIKELQLRDILDKRREQANIAQSCDCLKCPKFLKHFEMQRDEWQIKEN 1080
Query: 440 IKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTEL 499
I +K Q+ S L + + R +VL+ LG+ V+LKGKVACEI SA+EL LTEL
Sbjct: 1081 ISQLK-QLMSDQNLQLLPDYEQRIQVLKDLGFVDEQSRVQLKGKVACEIHSADELVLTEL 1139
Query: 500 IFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKV 559
I VL + + EE+V+LLS FV+QEK ++ LE + + +V VQ++ +V
Sbjct: 1140 ILENVLAEYEPEEIVALLSAFVFQEKTENVPTLNPRLEKGKEAIIRISEKVNDVQIQHQV 1199
Query: 560 -QI--DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLI 616
Q D+ F + R + E VY WAKG F I ++T V EG+++R I RL+E +++
Sbjct: 1200 LQSTEDINDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDETCREVK 1259
Query: 617 LAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 650
AAK +G+ L AK +EA KIKRD++FAASLY+
Sbjct: 1260 NAAKLVGDPTLYAKMQEAQEKIKRDVIFAASLYM 1293
Score = 38 (18.4 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 10/52 (19%), Positives = 28/52 (53%)
Query: 184 FYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNL-LQQYKSLKKD 234
F + ++ A D E+ + L+EE ++ E++++ + + ++ +S +D
Sbjct: 209 FEEAKSKEAADDDEEVEQTLQEEESNINPEQDETASDVGGVKIEDEESASED 260
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 139/194 (71%), Positives = 162/194 (83%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
M KLD D+EK +E +F +A+D LSD+DKKLPQV N+LPLLKRGIG+HH GLLPILKE
Sbjct: 404 MTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGIGIHHGGLLPILKE 463
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
IEILF EGLIK LFATETF++G+NMPA+TV+FTN RKFDG FRWISSGEYIQMSGRAG
Sbjct: 464 TIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAG 523
Query: 121 RRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLL 180
RRG+D+RGI ILMVD+KM P+ K +LKGSAD LNSAFHL+YNM+LN +R EE +PE +L
Sbjct: 524 RRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYML 583
Query: 181 RNSFYQFQADHAIP 194
SFYQFQ AIP
Sbjct: 584 EKSFYQFQHYRAIP 597
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 737 (264.5 bits), Expect = 3.5e-72, P = 3.5e-72
Identities = 227/678 (33%), Positives = 354/678 (52%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+ +DL + EK ++ F + L D+ +PQV + L+RGIGVHHSG+LPILKE
Sbjct: 536 LQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKE 595
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
++E+LFQ GL+K LFATETF++G+NMPA+TVVF + +KFDG + R + GEYIQM+GRAG
Sbjct: 596 IVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAG 655
Query: 121 RRGIDERGICILMVDDKMEPSTA-KMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENL 179
RRG DE G I+M + PS + M+ G + L S F L Y ++L +R E E++
Sbjct: 656 RRGHDETGTAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDI 715
Query: 180 LRNSFYQFQADHAIPDLEKQAKVLEEERDSMVI---EEEDSLKNYYNLLQQY-KSLKKDV 235
++ SF +F +P +KQ + L E++ +M+ E L N+Y+ +Y K + +
Sbjct: 716 MKFSFKEFNLKLQLPTQQKQLR-LAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIM 774
Query: 236 RDIVFSPKYCLPFLQPGRFVCIECTRGDD-NSPSF-----STEDHQVTWGVVIEFEKVKG 289
+ +V PK L+ GR + I T+G N + S + V++ + K
Sbjct: 775 KFVVTQPKIQKE-LKAGRVIVI--TQGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKA 831
Query: 290 VYEDDANKKPEDSNYTVNILT--RCVVSKDGAGKKTLKIVPLKE--SGEPLVVSVPISQI 345
+D + + + Y + LT G G T+ + + S + V I
Sbjct: 832 --KDSNSLQQGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAI 889
Query: 346 IKLSSAR-LPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRR 404
I+ R L KD P +++K+ +E N S + +P+ N+ + S + +V
Sbjct: 890 IRNWEQRQLERFKDSPP---SGSVVKAVTELNQLNESYID-NPD-NIKYVNLSKEIIVNA 944
Query: 405 IEALESL-FDKHEISKS----PL-----IEQKLKVLHMKQELTAKIKSIKRQMRSSTELA 454
+ L + H + K P EQ+ ++ ++ L I+ + R S+ L
Sbjct: 945 DSEVAMLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEEL-RFKNSARNLT 1003
Query: 455 FKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMV 514
+ + +VLR L Y D V LKGKVACE+ EL +TELI + D++ E+
Sbjct: 1004 LYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIA 1062
Query: 515 SLLSCFVWQEKLQDASKPREELE---LLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFR 571
+LLS V+Q K+QD E L+ F Q+ DT +A+ Q + I+ + +N F
Sbjct: 1063 ALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTI--LAEEQ-RFQAAIETDNRLN-F- 1117
Query: 572 PDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKF 631
++E VY WA+ F EIM++T V EG ++R I++L E ++ + AA IG L++K
Sbjct: 1118 -GLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKM 1176
Query: 632 EEAVSKIKRDIVFAASLY 649
EEA + IKRDIVF ASLY
Sbjct: 1177 EEASAAIKRDIVFTASLY 1194
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 470 (170.5 bits), Expect = 3.9e-71, Sum P(2) = 3.9e-71
Identities = 102/258 (39%), Positives = 158/258 (61%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
++ + EK I ++ L +D+ LPQ+ LL+RGI VHH GLLPI+KE+IE
Sbjct: 649 INFCNNKEKSQIHMFIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIVKELIE 708
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
ILF +G IK LFATETF++GLN+P +TV+F+++RK DG+ R ++ GE+ QM+GRAGRRG
Sbjct: 709 ILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRG 768
Query: 124 IDERGICILMV-DDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRN 182
+D G I+M + + +T K + G L S F L+YNM+LN +R E E +++
Sbjct: 769 LDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKY 828
Query: 183 SFYQFQADHAIPDLEKQAKVLEEERDSMVIEE----EDSLKNYYNLLQQYKSLKKDV-RD 237
SF + + P+ EKQ KVL+EE ++ + ++ ++ + L+ YK ++ ++
Sbjct: 829 SFSENAKETLQPEHEKQIKVLQEELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQE 888
Query: 238 IVFSPKYCLPFLQPGRFV 255
+V SP L L+ GR V
Sbjct: 889 MVKSPSI-LHILKEGRLV 905
Score = 313 (115.2 bits), Expect = 3.9e-71, Sum P(2) = 3.9e-71
Identities = 86/257 (33%), Positives = 137/257 (53%)
Query: 398 YQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKD 457
+Q L+ R + +F I K P + Q + + KI+ + M S L+
Sbjct: 1033 HQILLDRTNIRDEIFKLKSI-KCPNLSQHIVPKFKAHVIKKKIEELYHLM-SDQNLSLLP 1090
Query: 458 ELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLL 517
+ + R VL+ + + V LKG+VACEI+S EL LTELI + L + EE+V+LL
Sbjct: 1091 DYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALL 1150
Query: 518 SCFVWQEKLQDASKP--REELELLFTQLQDTARRVAKVQLECKVQI--DVEGFVNSFRPD 573
S FV++ K ++ P L ++++ +++ V ++ + D F++ R
Sbjct: 1151 SVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFLDRKRFA 1210
Query: 574 IMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEE 633
+M VY WA+G F EIME++P EG+++R I L+E+ +++ A+ IG + L K
Sbjct: 1211 MMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSR 1270
Query: 634 AVSKIKRDIVFAASLYL 650
A IKRDIVFAASLYL
Sbjct: 1271 AQELIKRDIVFAASLYL 1287
Score = 39 (18.8 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 199 QAKVLEEERDSMVIEEE 215
+AK+ EEE+ + I EE
Sbjct: 241 EAKLKEEEKSAKSISEE 257
Score = 39 (18.8 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 2 AKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEV 61
AKL E K E I A + + D+ ++ +LP IG+ P+ K V
Sbjct: 242 AKLKEEEKSAKSISEEIMEEATEETTADNADDAEIDELLP-----IGIDFGRTKPVSKSV 296
Score = 38 (18.4 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 175 SP-ENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKN 220
SP EN +N QF+ + +++ + + E ++ + EEE S K+
Sbjct: 209 SPAENEDQNG--QFKELKQLNEIDNELDIRIEANEAKLKEEEKSAKS 253
Score = 37 (18.1 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 346 IKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGI 393
I+ + A+L + + E M ++T E A NA +D +GI
Sbjct: 237 IEANEAKLKEEEKSAKSISEEIMEEATEETTADNADDAEIDELLPIGI 284
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 437 (158.9 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 88/206 (42%), Positives = 134/206 (65%)
Query: 1 MAKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKE 60
+A ++LT + EK ++ F + L DK+LPQV + L RG VHHSG+LPILKE
Sbjct: 582 LASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKE 641
Query: 61 VIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAG 120
V+E+LFQ+G +K LFATETF++G+NMPA+ VVF ++ K DG + R ++ GEY QM+GRAG
Sbjct: 642 VVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAG 701
Query: 121 RRGIDERGICILMVDDKM--EPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPEN 178
RRG+D G I++ D +P K ++ G A L S F ++Y+M+LN +R E+ E+
Sbjct: 702 RRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIED 761
Query: 179 LLRNSFYQFQADHAIPDLEKQAKVLE 204
+L+ S+ + +D EK+ +++
Sbjct: 762 MLQRSYVE--SDSLRESKEKRKSLVD 785
Score = 290 (107.1 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 77/230 (33%), Positives = 124/230 (53%)
Query: 424 EQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGK 483
++ VL + + KI+S++ ++ SS L +E R +VL L + +V LKG+
Sbjct: 1041 DEHFSVLRDRIRIERKIESLEYEL-SSDALLLSEEYHNRLKVLEALNFV-EQKMVSLKGR 1098
Query: 484 VACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQL 543
+ CEI +EL +TELI + E+ +LLS Q + + + +F ++
Sbjct: 1099 IGCEIHH-QELLITELILDYKFHQRSPAELAALLSTLTCQ--YNSGREMQFGGDTVFGEI 1155
Query: 544 QDTAR----RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEG 599
++ + R+ V + K QI G R D+ME VY WA G+ FY+IME+T EG
Sbjct: 1156 SESVKSVLTRLESVASKHKSQISDLGC--EIRFDLMEVVYEWANGTPFYQIMEMTDCQEG 1213
Query: 600 SLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 649
+++ I+RL+EV + + A + +G+ L K EE + I+RDIVFAASLY
Sbjct: 1214 LIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLY 1263
Score = 59 (25.8 bits), Expect = 4.3e-41, Sum P(3) = 4.3e-41
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 400 KLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDEL 459
++ R+IE+LE + S +LKVL + K+ S+K R E+ + EL
Sbjct: 1052 RIERKIESLEYELSSDALLLSEEYHNRLKVLEALNFVEQKMVSLKG--RIGCEIHHQ-EL 1108
Query: 460 KARKRVLRRLGYATSD-DVVELKGKVACEISSAEELTLT-ELIFNGVLKDVK 509
+ +L + S ++ L + C+ +S E+ + +F + + VK
Sbjct: 1109 LITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVK 1160
Score = 54 (24.1 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 336 LVVSVPISQIIKLSSARL---PMPKDLLPLQTRENMLKSTSEFLARNAS 381
LV S + ++A + +PK L T EN L STS+F R A+
Sbjct: 872 LVASADADETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAA 920
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 539 (194.8 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 152/438 (34%), Positives = 232/438 (52%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
++LT+ +EK I ++ L +DDK LPQ+ + LL+RGIGVHH GLLPI+KE++E
Sbjct: 713 VNLTQGNEKSQIRVFIEQSLGRLCEDDKSLPQILQMKELLERGIGVHHGGLLPIVKELVE 772
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
ILF + L+K LFATETF++G+NMPAKTVV+++ RK DG FR + GEY QMSGRAGRRG
Sbjct: 773 ILFSKSLVKVLFATETFAMGVNMPAKTVVYSSTRKHDGITFRDLIPGEYTQMSGRAGRRG 832
Query: 124 IDERGICILMV-DDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRN 182
+D+ G I+ D E +T + M+ G+ LNS F L+YNM+LN +R + E++++
Sbjct: 833 LDKVGTVIITYWKDIPEQATIESMILGTPSRLNSQFRLTYNMILNLLRVPDFKVEDMIKR 892
Query: 183 SFYQFQADHAIPDLEKQAKVLEEERDSMV----IEEEDSLKNYYNLLQQYKSLKKDVRDI 238
SF +F + +P +EKQ + L++++ + I E + +YY L Q K + +++I
Sbjct: 893 SFSEFSSQKELPGIEKQIEKLQQQQKQLAQVDCILGEPDIDHYYKLFSQAKKYNQQIQNI 952
Query: 239 VFSPKYCLP---FLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDA 295
+ + LP L GR V + + + + +D DD
Sbjct: 953 ILN----LPNDNHLSIGRVVVLSTSSNIEKEVNDDDDDDDDN--------------NDD- 993
Query: 296 NKKPEDSNYTVNILTRC--VVSKDGAGKKT---LKIVPLKESGEPLVVSVPISQIIKLSS 350
++ E+ YT+ ++ C + K K KI LK E +V ++II S
Sbjct: 994 DEIFENEKYTIGLILECKSTLIKQYTNTKVDRVFKIFSLKLKIENDIVLCVGNEIITSSG 1053
Query: 351 ARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALES 410
+ M LQ +++ LKS LA SG E+ + I S Q+L+R IE
Sbjct: 1054 GKEIMKVCNEKLQLKQSDLKS---ILAGAESG----GESEILINSLE-QQLLRLIEEYPL 1105
Query: 411 LFDKHEISKSPLIEQKLK 428
I P+ + KLK
Sbjct: 1106 PLGPKSID--PIKQLKLK 1121
Score = 388 (141.6 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 127/483 (26%), Positives = 232/483 (48%)
Query: 193 IPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFS-PKYCLPFLQP 251
I L++Q K L + ++ E D + +YY L Q K + +++I+ + P L
Sbjct: 910 IEKLQQQQKQLAQV--DCILGEPD-IDHYYKLFSQAKKYNQQIQNIILNLPND--NHLSI 964
Query: 252 GRFVCIECTRG-------DDNSPSFSTEDHQV------TWGVVIEFEK--VKGVYEDDAN 296
GR V + + DD+ + +D ++ T G+++E + +K +
Sbjct: 965 GRVVVLSTSSNIEKEVNDDDDDDDDNNDDDEIFENEKYTIGLILECKSTLIKQYTNTKVD 1024
Query: 297 KKPEDSNYTVNI---LTRCV---VSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSS 350
+ + + + I + CV + GK+ +K+ E L + + I L+
Sbjct: 1025 RVFKIFSLKLKIENDIVLCVGNEIITSSGGKEIMKVC-----NEKLQLKQSDLKSI-LAG 1078
Query: 351 ARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALES 410
A ++L + +L+ E+ +DP + ++ + ++++E
Sbjct: 1079 AESGGESEILINSLEQQLLRLIEEY-PLPLGPKSIDPIKQLKLKDVDFVSTYDHLQSIEK 1137
Query: 411 LFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLG 470
L + + K P + + + +L I+ K S L + R +L LG
Sbjct: 1138 LIPESKCHKCPRLHDHYEQTEKRYQLQYAIRDAK-YTASDENLKLMPQFNIRLDILHELG 1196
Query: 471 YATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEK--LQD 528
Y ++ V LKG+V+ EI++ E+L +TELIF +++ E+VS+LSC ++QEK +Q
Sbjct: 1197 YIDDENTVTLKGRVSREINTCEDLVITELIFENAFINLEPSEVVSVLSCLIFQEKDAVQP 1256
Query: 529 ASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNS-FRPDIMEAVYAWAKGSKF 587
+ PR LE L TA + KV+ + + + + + + + +M+ VY WA+G+ F
Sbjct: 1257 SLTPR--LEEAKQNLIKTAEKTYKVESDKGLDVVPDDKLETTLKFGLMQVVYEWARGTPF 1314
Query: 588 YEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAAS 647
+I +T V EGS++RAI R+ E Q++ AA+ IG+T+L K EEA+ IKRDIVF +S
Sbjct: 1315 NDICTLTNVLEGSIVRAITRIGETCQEVRNAARVIGDTKLLQKMEEAMRLIKRDIVFTSS 1374
Query: 648 LYL 650
LY+
Sbjct: 1375 LYV 1377
Score = 38 (18.4 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 5 DLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNIL 40
++ EDD++ + I +D L D +K ++ +I+
Sbjct: 323 EVYEDDDQEDDLDIEEEELDELDDIEKTKEEIDDII 358
Score = 38 (18.4 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 177 ENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVR 236
EN+ + Q Q ++Q + ++E++ EEE+ + Y L K L++++
Sbjct: 259 ENINKQDNKQQQQQQQQQQQQQQQQQQQQEKEK---EEEEEVNLRYTL----KDLEREIE 311
Query: 237 D 237
+
Sbjct: 312 E 312
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 337 (123.7 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 73/194 (37%), Positives = 110/194 (56%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
L LT ++E+ I + L+D D + L RG+ HH+G+LP + +E
Sbjct: 297 LRLTSEEERARIAEVIDHRCGDLADSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVE 356
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
LF GL+K +FATET ++G+NMPA+TVV + KF+G++ ++ GEY Q++GRAGRRG
Sbjct: 357 ELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRG 416
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQI-RCEEGSPENLLRN 182
ID G +++ ++EPS + L S+F SYNM +N + R LL
Sbjct: 417 IDVEGHAVVIWHPEIEPSEVAGLASTRTFPLRSSFAPSYNMTINLVHRMGPQQAHRLLEQ 476
Query: 183 SFYQFQADHAIPDL 196
SF Q+QAD ++ L
Sbjct: 477 SFAQYQADRSVVGL 490
Score = 115 (45.5 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 58/303 (19%), Positives = 124/303 (40%)
Query: 353 LPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLF 412
+ +PK + Q R + + + L A+GL + P A + + +E+
Sbjct: 608 MTLPKRVEHRQPR--VRRDLASALRSAAAGLVI-PAARRVSEAGGFHD--PELESSREQL 662
Query: 413 DKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTE-LAFKDELKARKRVLRRL-- 469
+H + SP +E +++ + ++R++ ++T LA + R
Sbjct: 663 RRHPVHTSPGLEDQIRQAERYLRIERDNAQLERKVAAATNSLARTFDRFVGLLTEREFID 722
Query: 470 GYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDA 529
G AT D VV G++ I S +L + E + G + +K E+ ++S V++ + D
Sbjct: 723 GPAT-DPVVTDDGRLLARIYSESDLLVAECLRTGAWEGLKPAELAGVVSAVVYETRGGDG 781
Query: 530 SKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPD--IMEAVYAWAKGSKF 587
++ +L+ + +++ + S PD + +Y W++
Sbjct: 782 QGAPFGADVPTPRLRQALTQTSRLSTTLRADEQAHRITPSREPDDGFVRVIYRWSRTGDL 841
Query: 588 YEIMEI-------TPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKR 640
+ +P+ G +R R++ ++L Q+ AA + EL A + A+ I+R
Sbjct: 842 AAALAAADVNGSGSPLLAGDFVRWCRQVLDLLDQVRNAAPN---PELRATAKRAIGDIRR 898
Query: 641 DIV 643
+V
Sbjct: 899 GVV 901
>TAIR|locus:2020573 [details] [associations]
symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
Uniprot:B9DFG3
Length = 1171
Score = 262 (97.3 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 59/129 (45%), Positives = 80/129 (62%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
L RGI HH+G LP+ K IE LFQ GL+K +FATET + G+NMPA+T V +++ K G+
Sbjct: 494 LLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKKAGN 553
Query: 103 KFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPST--AKMMLKGSADSLNSAFHL 160
+ + E QM+GRAGRRGIDE+G +L V E + K++ G L S F
Sbjct: 554 ERIELGPNELYQMAGRAGRRGIDEKGYTVL-VQTAFEGAEECCKLVFAG-VKPLVSQFTA 611
Query: 161 SYNMLLNQI 169
SY M+LN +
Sbjct: 612 SYGMVLNLV 620
Score = 89 (36.4 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 50/238 (21%), Positives = 93/238 (39%)
Query: 395 SSSYQKLVRRIEALESLFD--KHEISKSPLIEQKLKVLHMKQELTAKIKSIK-RQMRSST 451
S Y ++ + S K ++S+S + K+L K+K +K R R
Sbjct: 909 SEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKKILENANLTVEKMKRLKARSRRLIN 968
Query: 452 EL------AFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVL 505
L +KD ++ + + ++ G+ A I EL L ++ N L
Sbjct: 969 RLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPLGETAAAIRGENELWLAMVLRNKAL 1028
Query: 506 KDVKVEEMVSLLSCFV--------WQEKLQDASKPREELELLFTQLQDTARRVAKVQLEC 557
D+K ++ + + V W++ +P + + + L+D + K+Q +
Sbjct: 1029 VDLKPPQLAGVCASLVSEGIKVRPWRDN-NYIYEPSDTVVDMVNFLEDQRSSLIKLQEKH 1087
Query: 558 KVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQL 615
+V I V AWA G + E+M + EG L R +RR ++L Q+
Sbjct: 1088 EVMIPC-----CLDVQFSGMVEAWASGLSWKEMMMECAMDEGDLARLLRRTIDLLAQI 1140
Score = 46 (21.3 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 441 KSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTL 496
KS + S+ +A K EL + L SD+ ++ K + +E+T+
Sbjct: 653 KSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYKEITV 708
Score = 40 (19.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 21/90 (23%), Positives = 42/90 (46%)
Query: 405 IEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKR 464
+ L SL D+ E+ + E+ +E +KI +K++M S +E F++ K+
Sbjct: 893 VPVLSSLSDEDEVLH--MSEEYDNAAQKYKEQRSKISRLKKKM-SRSE-GFREY----KK 944
Query: 465 VLRRLGYATSDDVVELKGKVACEISSAEEL 494
+L T + + LK + I+ E++
Sbjct: 945 ILENANL-TVEKMKRLKARSRRLINRLEQI 973
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 212 (79.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 56/177 (31%), Positives = 88/177 (49%)
Query: 408 LESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLR 467
LE L + SP + L + ++ +++ + R + S L E R VLR
Sbjct: 4 LEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLR 62
Query: 468 RLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQ 527
LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 63 TLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGD 121
Query: 528 DASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKG 584
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+G
Sbjct: 122 AGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARG 178
>UNIPROTKB|H0YAC4 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012961
Pfam:PF08148 GO:GO:0005524 GO:GO:0016818 HGNC:HGNC:18734
ChiTaRS:SKIV2L2 EMBL:AC010480 EMBL:AC020728 Ensembl:ENST00000508716
Uniprot:H0YAC4
Length = 72
Score = 180 (68.4 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 574 IMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEE 633
+M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E
Sbjct: 2 LMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAE 61
>RGD|1560014 [details] [associations]
symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 60"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0051607 "defense
response to virus" evidence=ISO] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=ISO] [GO:1900246 "positive
regulation of RIG-I signaling pathway" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1560014 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00690000102154 IPI:IPI00358301
Ensembl:ENSRNOT00000019667 Uniprot:F1M4N8
Length = 1304
Score = 200 (75.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 55/163 (33%), Positives = 85/163 (52%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
L++ +D + + I A+ M+ K + + L +RGIG HHS + K+++E
Sbjct: 810 LEIPKDCTYADQKAIDEEALQMVFKRVKYERKGDTLKKLARRGIGYHHSSMTNKEKQLVE 869
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
ILF++G I+ + AT T S+G+NMP K+VVF + + + Y QMSGRAGRRG
Sbjct: 870 ILFRKGFIRVVTATRTLSLGINMPCKSVVFAQNSVY-------LDALNYRQMSGRAGRRG 922
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLL 166
D G + D + P K+ +K L F LS ++L
Sbjct: 923 QDLLGD-VYFFDIPL-PKIGKL-IKSKVPDLRGQFPLSITLIL 962
Score = 56 (24.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 609 EEVLQQLILA-AKSIGETELEAKFEEAVSKIKRDIVFAASL 648
E+V+++L+L A G + AKF EA K + VF L
Sbjct: 1069 EDVMEKLVLVLANLFGRRYIPAKFHEAHPKFYQSKVFLDDL 1109
>WB|WBGene00016194 [details] [associations]
symbol:C28H8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0004427 "inorganic diphosphatase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 EMBL:FO080703
eggNOG:COG4581 GeneTree:ENSGT00690000102154 PIR:A88470
RefSeq:NP_498283.1 ProteinModelPortal:Q09475 SMR:Q09475
STRING:Q09475 PaxDb:Q09475 EnsemblMetazoa:C28H8.3.1
EnsemblMetazoa:C28H8.3.2 GeneID:175834 KEGG:cel:CELE_C28H8.3
UCSC:C28H8.3.1 CTD:175834 WormBase:C28H8.3 HOGENOM:HOG000018763
InParanoid:Q09475 OMA:YARFRNK NextBio:889866 Uniprot:Q09475
Length = 1714
Score = 196 (74.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 18 IFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT 77
I+ ++ + K +L L +RGIG HH+GL + + +E+LF+ G + LF+T
Sbjct: 1253 IYAKMVERMQKGAKTRESTQVLLKLFERGIGYHHAGLNTVERGAVEVLFRSGNLAVLFST 1312
Query: 78 ETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
T S+G+NMP KTV+F V D + ++ Y QMSGRAGRRG D G I M
Sbjct: 1313 STLSLGVNMPCKTVMF-GV-----DTLQ-LTPLLYRQMSGRAGRRGFDHSGNVIFM---S 1362
Query: 138 MEPSTAKMMLKGSADSL 154
+ S + +L S +L
Sbjct: 1363 IPTSKVRRLLTASLSNL 1379
>UNIPROTKB|J9P0M0 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102154 EMBL:AAEX03010133 EMBL:AAEX03010134
EMBL:AAEX03010135 Ensembl:ENSCAFT00000044956 Uniprot:J9P0M0
Length = 1708
Score = 191 (72.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
L++ E+ N + I + M+ D K + + + L +RGIG HHS L K+++E
Sbjct: 1214 LEIPEECTYANQKAIDAETLQMVFDRVKFTRKGAELKALARRGIGYHHSSLSFKDKQLVE 1273
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
+LF++G I+ + AT T ++G+NMP K+VVF ++ + Y QMSGRAGRRG
Sbjct: 1274 VLFRKGFIRVVTATGTLALGINMPCKSVVFAQ-------NSIYLDALNYRQMSGRAGRRG 1326
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLL 166
D G + + P K+ +K + L F L ++L
Sbjct: 1327 QDLMGD-VYFFGIPL-PKIEKL-IKSNVPELRGQFPLGITLVL 1366
Score = 55 (24.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 609 EEVLQQLILA-AKSIGETELEAKFEEAVSKIKRDIVFAASL 648
++V+++L+L A G L AKF+E K + VF L
Sbjct: 1473 QDVMEKLVLVLANLFGRRILPAKFQETTIKFYQSKVFLEDL 1513
>UNIPROTKB|E2QSY2 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IEA] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003727
GO:GO:0051607 GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 OMA:QDCTYAD
GO:GO:1900245 GO:GO:1900246 GeneTree:ENSGT00690000102154
EMBL:AAEX03010133 EMBL:AAEX03010134 EMBL:AAEX03010135
Ensembl:ENSCAFT00000014321 Uniprot:E2QSY2
Length = 1711
Score = 191 (72.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
L++ E+ N + I + M+ D K + + + L +RGIG HHS L K+++E
Sbjct: 1217 LEIPEECTYANQKAIDAETLQMVFDRVKFTRKGAELKALARRGIGYHHSSLSFKDKQLVE 1276
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
+LF++G I+ + AT T ++G+NMP K+VVF ++ + Y QMSGRAGRRG
Sbjct: 1277 VLFRKGFIRVVTATGTLALGINMPCKSVVFAQ-------NSIYLDALNYRQMSGRAGRRG 1329
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLL 166
D G + + P K+ +K + L F L ++L
Sbjct: 1330 QDLMGD-VYFFGIPL-PKIEKL-IKSNVPELRGQFPLGITLVL 1369
Score = 55 (24.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 609 EEVLQQLILA-AKSIGETELEAKFEEAVSKIKRDIVFAASL 648
++V+++L+L A G L AKF+E K + VF L
Sbjct: 1476 QDVMEKLVLVLANLFGRRILPAKFQETTIKFYQSKVFLEDL 1516
>UNIPROTKB|Q5H9U9 [details] [associations]
symbol:DDX60L "Probable ATP-dependent RNA helicase
DDX60-like" species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 HOGENOM:HOG000169263 HOVERGEN:HBG107797
EMBL:AL832950 EMBL:CR933601 EMBL:AC079926 EMBL:AC093888
EMBL:AK055595 IPI:IPI00853133 IPI:IPI00935252 RefSeq:NP_001012985.1
UniGene:Hs.535011 ProteinModelPortal:Q5H9U9 STRING:Q5H9U9
PhosphoSite:Q5H9U9 DMDM:74755482 PaxDb:Q5H9U9 PRIDE:Q5H9U9
Ensembl:ENST00000260184 Ensembl:ENST00000505890
Ensembl:ENST00000511577 GeneID:91351 KEGG:hsa:91351 UCSC:uc003irq.4
CTD:91351 GeneCards:GC04M169277 HGNC:HGNC:26429 HPA:HPA043211
neXtProt:NX_Q5H9U9 PharmGKB:PA162383445 InParanoid:Q5H9U9
OMA:AQDSVYL GenomeRNAi:91351 NextBio:77184 ArrayExpress:Q5H9U9
Bgee:Q5H9U9 CleanEx:HS_DDX60L Genevestigator:Q5H9U9 Uniprot:Q5H9U9
Length = 1706
Score = 198 (74.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 4 LDLTEDDEKVNIETIFWS-AMDMLSDDDKKLPQV------SNILPLLKRGIGVHHSGLLP 56
L+++ED +++ + + S ++ LP+V + L +RGIG HHS +
Sbjct: 1195 LEISEDCTYADVKALHTEITRNKDSTLERVLPRVRFTRHGKELKALAQRGIGYHHSSMYF 1254
Query: 57 ILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMS 116
KE +EILF +GLI+ + ATET ++G++MP K+VVF D ++ + Y QMS
Sbjct: 1255 KEKEFVEILFVKGLIRVVTATETLALGIHMPCKSVVFAQ------DSV-YLDALNYRQMS 1307
Query: 117 GRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLN-QIRCEEGS 175
GRAGRRG D G + D + P K +L S L F LS ++L + +G
Sbjct: 1308 GRAGRRGQDLLGN-VYFFDIPL-PKI-KRLLASSVPELRGQFPLSITLVLRLMLLASKGD 1364
Query: 176 -PEN-------LLRNSFYQFQADHAIPDLE 197
PE+ +L++S F+ A+ L+
Sbjct: 1365 DPEDAKAKVLSVLKHSLLSFKRRRAMETLK 1394
Score = 46 (21.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 609 EEVLQQLILA-AKSIGETELEAKFEEAVSKIKRDIVFAASL 648
++V+++L+L A G + AKF+ A + V A L
Sbjct: 1461 QDVMEKLVLVLANLFGRKYIPAKFQNANLSFSQSKVILAEL 1501
Score = 40 (19.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 200 AKVLEEERDSMVIEEEDSLKNYYNLLQQ 227
+++ E +RD++V+ + + +Y LQ+
Sbjct: 1668 SELCENKRDNVVLAFKQLSQTFYEKLQE 1695
>UNIPROTKB|F1RIW4 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900246 "positive regulation of RIG-I signaling
pathway" evidence=IEA] [GO:1900245 "positive regulation of MDA-5
signaling pathway" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0003727 GO:GO:0051607
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 OMA:QDCTYAD GO:GO:1900245 GO:GO:1900246
GeneTree:ENSGT00690000102154 EMBL:AEMK01191618 EMBL:CU469408
Ensembl:ENSSSCT00000010657 Uniprot:F1RIW4
Length = 1705
Score = 188 (71.2 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 4 LDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIE 63
L++ +D + + + + + D K + + + L RG+G HHS L K+++E
Sbjct: 1211 LEIPQDCTYADQKALDAQTLQTVFDRVKLTRKGAELKALAARGVGYHHSSLNFKEKQLVE 1270
Query: 64 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRG 123
ILF++G I+ + AT T ++G+NMP K+VVF ++ + Y QMSGRAGRRG
Sbjct: 1271 ILFRKGFIRVVTATGTLALGINMPCKSVVFAQ-------NSIYLDALNYRQMSGRAGRRG 1323
Query: 124 IDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLL 166
D G + D + P K+ +K + L F LS +++L
Sbjct: 1324 QDLLGD-VYFFDIPL-PKIEKL-IKSNVPQLRGQFPLSISLVL 1363
Score = 56 (24.8 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 609 EEVLQQLILA-AKSIGETELEAKFEEAVSKIKRDIVFAASL 648
++V+++L+L A G T AKF E+ K + VF L
Sbjct: 1470 QDVMEKLVLVLANLFGRTYFPAKFHESPPKFYQSKVFLEDL 1510
>UNIPROTKB|Q8IY21 [details] [associations]
symbol:DDX60 "Probable ATP-dependent RNA helicase DDX60"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0009615 "response to
virus" evidence=IDA] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:1900245 "positive regulation of MDA-5 signaling
pathway" evidence=IMP] [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003727 GO:GO:0045087 GO:GO:0051607 GO:GO:0009615
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC068989 EMBL:BC007820
EMBL:BC038115 EMBL:AK001649 IPI:IPI00217606 RefSeq:NP_060101.3
UniGene:Hs.591710 ProteinModelPortal:Q8IY21 SMR:Q8IY21
IntAct:Q8IY21 STRING:Q8IY21 PhosphoSite:Q8IY21 DMDM:296439377
PaxDb:Q8IY21 PRIDE:Q8IY21 Ensembl:ENST00000393743 GeneID:55601
KEGG:hsa:55601 UCSC:uc003irp.3 CTD:55601 GeneCards:GC04M169137
HGNC:HGNC:25942 HPA:HPA046952 MIM:613974 neXtProt:NX_Q8IY21
PharmGKB:PA162383444 eggNOG:COG4581 HOGENOM:HOG000169263
HOVERGEN:HBG107797 InParanoid:Q8IY21 OMA:QDCTYAD OrthoDB:EOG4XSKP0
PhylomeDB:Q8IY21 GenomeRNAi:55601 NextBio:60142 ArrayExpress:Q8IY21
Bgee:Q8IY21 CleanEx:HS_DDX60 Genevestigator:Q8IY21 GO:GO:1900245
GO:GO:1900246 Uniprot:Q8IY21
Length = 1712
Score = 183 (69.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 50/139 (35%), Positives = 75/139 (53%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
L +RGIG HHS + K+++EILF++G ++ + AT T ++G+NMP K+VVF +
Sbjct: 1256 LAERGIGYHHSAMSFKEKQLVEILFRKGYLRVVTATGTLALGVNMPCKSVVFAQNSVY-- 1313
Query: 102 DKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLS 161
+ + Y QMSGRAGRRG D G D P K+ +K + L F LS
Sbjct: 1314 -----LDALNYRQMSGRAGRRGQDLMGDVYFF--DIPFPKIGKL-IKSNVPELRGHFPLS 1365
Query: 162 YNMLLN-QIRCEEGS-PEN 178
++L + +G PE+
Sbjct: 1366 ITLVLRLMLLASKGDDPED 1384
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 176 (67.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 46/151 (30%), Positives = 80/151 (52%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
+++GI HH+G+ + +E F G I L +T T ++G+N+PA V+ + ++
Sbjct: 417 MQQGIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSS 476
Query: 103 KFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSY 162
+ + S + +QM GRAGR + G ++M D KM+ T + ++ G+ D L S+ HL+
Sbjct: 477 EIQEYSDLDVLQMIGRAGRPQFETHGCAVIMTDSKMK-QTYENLIHGT-DVLESSLHLN- 533
Query: 163 NMLLNQIRCEEG-----SPE---NLLRNSFY 185
L+ + E S E N LRN+F+
Sbjct: 534 --LIEHLAAETSLETVYSIETAVNWLRNTFF 562
Score = 55 (24.4 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 508 VKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVE 564
+K++ +SLL C + KL++ EEL L F +++ +A + + + +D+E
Sbjct: 825 IKIKNDISLLPCLNIRTKLENCKIENEELWLTF-KVEISATFKSSIWHGQHLSLDIE 880
Score = 48 (22.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 194 PDLEKQ--AKVLEEERDSMVIEEEDSLKN-YYNLLQQYKSLKKDVRDIVFSPKYCLPFLQ 250
P LEK+ +K + + ++ I +L + YNL QQ S++ + + P+ C P +
Sbjct: 1093 PHLEKRLNSKPKQWQEENTDIATVHTLPSKIYNLSQQMSSMEAGEQVLKSGPENC-PEII 1151
Query: 251 PGRFVCIECTRGDDNSPSFSTEDHQVTW-GVVIEFE 285
P + + + S S + + + G IEFE
Sbjct: 1152 PIDLESSDSYSSNTAASSISDPNGDLDFLGSDIEFE 1187
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 181 (68.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 45/125 (36%), Positives = 70/125 (56%)
Query: 13 VNIETIFWSAMDMLSDDDKKLPQVSNILPLLKR----GIGVHHSGLLPILKEVIEILFQE 68
VN++ MD+ S D S + P+L+ G+ HH+GL +E++E +++
Sbjct: 798 VNVDGENSEFMDIRSAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRK 857
Query: 69 GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERG 128
GL++ L AT T + G+N+PA+ V+F + G F I Y QMSGRAGR GID +G
Sbjct: 858 GLVRVLTATSTLAAGVNLPARRVIFR--QPMIGRDF--IDGTRYKQMSGRAGRTGIDTKG 913
Query: 129 ICILM 133
+L+
Sbjct: 914 DSVLI 918
Score = 55 (24.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 17/89 (19%), Positives = 40/89 (44%)
Query: 424 EQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGK 483
E K K+ K A + + E + LK R+R L ++ + + + + + +
Sbjct: 1987 EAKEKIRSFKSSFPAVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQ 2046
Query: 484 VA---CEISSAEELTLTEL-IFNGVLKDV 508
C+ S+A+ + + + I++ + +DV
Sbjct: 2047 AVNSMCQGSAADIIKIAMINIYSAIAEDV 2075
Score = 39 (18.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 594 TPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEA 629
+PV+ +L + + LE V +Q ++ IG++E+ A
Sbjct: 1511 SPVYYVNLNKDLPNLECVEKQKLIEDAVIGKSEVLA 1546
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 182 (69.1 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 20 WSAMDMLSDDDKKLP-QVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATE 78
W MDML +D + N+ L GIG+HH+GL + ++E LF E I+ L AT
Sbjct: 1444 WLNMDMLELEDLMAAIKDENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKIQVLIATA 1503
Query: 79 TFSIGLNMPAKTVVFTNVRKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDD 136
T + G+N PA V+ FDG K +++ + +QM GRAGR D+ + ++ V D
Sbjct: 1504 TLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQD 1563
Score = 158 (60.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
+ I PL +RG+G+HH+GL + ++E F EG + LF T T + G+N+PA VV
Sbjct: 609 AQISPLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGT 668
Query: 97 RKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD-DKME 139
FD +K + G + Q+ GRAGR + G I++ DK++
Sbjct: 669 DVFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTRDKID 714
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 180 (68.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/186 (27%), Positives = 93/186 (50%)
Query: 6 LTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEIL 65
L+E++ K +F + ++++ ++ K +LK GIG+HH+GL K ++E L
Sbjct: 1782 LSEEERKNVANILFQNYLNLIENEHLK--------EILKYGIGIHHAGLNENDKTIVEYL 1833
Query: 66 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD--KFRWISSGEYIQMSGRAGRRG 123
F +I+ L T T + G+N+PA V+ +D K++ I + +QM GRAGR
Sbjct: 1834 FLNKIIQILICTSTLAWGINLPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQ 1893
Query: 124 IDERGICILMVDDKMEPSTAKMMLK--GSADSLNSAF--HLSYNMLLNQIRCEEGSPENL 179
D++ + IL+V +K + + + ++ F H++ + N I +E N
Sbjct: 1894 FDDKALAILLVQEKRKNAIKNFLYHPMNIESNIMENFNEHINAEICSNVINNKEDI-FNY 1952
Query: 180 LRNSFY 185
L S+Y
Sbjct: 1953 LTKSYY 1958
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 180 (68.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/186 (27%), Positives = 93/186 (50%)
Query: 6 LTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEIL 65
L+E++ K +F + ++++ ++ K +LK GIG+HH+GL K ++E L
Sbjct: 1782 LSEEERKNVANILFQNYLNLIENEHLK--------EILKYGIGIHHAGLNENDKTIVEYL 1833
Query: 66 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD--KFRWISSGEYIQMSGRAGRRG 123
F +I+ L T T + G+N+PA V+ +D K++ I + +QM GRAGR
Sbjct: 1834 FLNKIIQILICTSTLAWGINLPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQ 1893
Query: 124 IDERGICILMVDDKMEPSTAKMMLK--GSADSLNSAF--HLSYNMLLNQIRCEEGSPENL 179
D++ + IL+V +K + + + ++ F H++ + N I +E N
Sbjct: 1894 FDDKALAILLVQEKRKNAIKNFLYHPMNIESNIMENFNEHINAEICSNVINNKEDI-FNY 1952
Query: 180 LRNSFY 185
L S+Y
Sbjct: 1953 LTKSYY 1958
>DICTYBASE|DDB_G0279107 [details] [associations]
symbol:DDB_G0279107 "Helicase POLQ-like"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
ProtClustDB:CLSZ2430718 Uniprot:Q54X98
Length = 1238
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 64/198 (32%), Positives = 94/198 (47%)
Query: 2 AKLDLTEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEV 61
A LD D+ ++ I+ I S + +D K++ + G+ H++ L +EV
Sbjct: 708 AILDNRRDEREILIQLIESSNGCKVEEDFKRM---------IMAGVAYHNADLTNDEREV 758
Query: 62 IEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGR 121
IE F+E + L AT T S G+N+PA+ V+ + R G I S Y QM GRAGR
Sbjct: 759 IERGFKERSLLVLCATSTLSTGVNLPARRVILRSPRM--GRNVLDIRS--YRQMVGRAGR 814
Query: 122 RGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHL---SYNMLLNQIRCEEGSPEN 178
GIDE G ILM D P AK +L D L S+ + S+ ++ C + +
Sbjct: 815 AGIDEFGESILMCDH-FAPDKAKKLLTSPMDPLLSSINKNVESFQKIILDSICSGIASDK 873
Query: 179 LLRNSF--YQFQADHAIP 194
SF Y F + H +P
Sbjct: 874 FSILSFFSYTFYSTHLLP 891
>POMBASE|SPAC694.02 [details] [associations]
symbol:SPAC694.02 "DEAD/DEAH box helicase" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC694.02
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:T50247 RefSeq:NP_594482.1
ProteinModelPortal:Q9P7T8 PRIDE:Q9P7T8 EnsemblFungi:SPAC694.02.1
GeneID:2543333 KEGG:spo:SPAC694.02 HOGENOM:HOG000194492 OMA:HTRDYRI
OrthoDB:EOG4S4SQ7 NextBio:20804349 Uniprot:Q9P7T8
Length = 1717
Score = 177 (67.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
L RGIG+HHSGL ++++E+LF+ G + + AT T S+G+NMP +TVVF GD
Sbjct: 1221 LYRGIGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFL------GD 1274
Query: 103 KFRWISSGEYIQMSGRAGRRGIDERG 128
+ +++ + Q +GRAGRRG D G
Sbjct: 1275 SLQ-LNALNFHQAAGRAGRRGFDLLG 1299
>UNIPROTKB|G4N3Z7 [details] [associations]
symbol:MGG_05900 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
Length = 1508
Score = 174 (66.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 59/223 (26%), Positives = 106/223 (47%)
Query: 26 LSDDDKKLP------QVSN--ILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT 77
++DD K P +V+N + ++++G+ HH+GL + +E + EG + + T
Sbjct: 515 MADDKKPWPGPGQNMKVTNDGLQQVMQQGVAFHHAGLEQQDRLAVEKAYLEGKLHVICCT 574
Query: 78 ETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
T S+G+N+P TV+ F K S E +QM GRAGR D + I++ +
Sbjct: 575 STLSVGVNLPCHTVILKGTMGFQDGKLLEYSDLEVVQMLGRAGRPQFDNSAVAIILTRSE 634
Query: 138 MEPSTAKMMLKGSA--DSL---NSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHA 192
+ + + M G+ +S N HL+ + L IR + + E L+++F + HA
Sbjct: 635 TK-ARYEAMASGTQVLESTLHHNLIHHLNSEICLGTIRSLDSAKE-WLKSTFLGVRL-HA 691
Query: 193 IPDLEK-QAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKD 234
P K ++ E+ + +D + NLLQ+ K ++ D
Sbjct: 692 NPSHYKIDSQSPNGEKLHVGRSIDDMCEREINLLQEAKLIRFD 734
>WB|WBGene00021905 [details] [associations]
symbol:helq-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
WormBase:Y55B1AL.3a Uniprot:H2KY86
Length = 923
Score = 178 (67.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 26 LSD-DDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGL 84
LSD DD+++ V + + G+ HHSGL ++ +E F EGLI + AT T + G+
Sbjct: 447 LSDNDDERMDAV--LKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGV 504
Query: 85 NMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAK 144
N+P + V+ G + R + +Y+QM+GRAGR G D +G CI ++ E +
Sbjct: 505 NLPVRRVIIK--APMVGRE-R-LGKAQYLQMAGRAGRAGFDTKGDCITIIKAGEEERWFR 560
Query: 145 MMLKGSADSLNSAFHLSYNM---LLNQI--RCEEGSPENL--LRNS-FYQFQADHAIPDL 196
MLK S+ +M +L+ + + E E + +R S FY ++ I L
Sbjct: 561 EMLKSDIPRCMSSLSSEESMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKL 620
Query: 197 -EKQAKVLEE 205
E K LEE
Sbjct: 621 VESSVKRLEE 630
Score = 42 (19.8 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 460 KARKRVLRRLGYATSDDVVELKG-KVACEISSAEELTLTELIFNG--VLKDVKVEEMVSL 516
KAR +L + GY T + K+ E+ + +I + VL+D +V+E +
Sbjct: 851 KARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLRD-QVDEKMEE 909
Query: 517 LSCFVW 522
L VW
Sbjct: 910 LD--VW 913
>UNIPROTKB|H9L351 [details] [associations]
symbol:H9L351 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
EMBL:AADN02064074 Ensembl:ENSGALT00000021750
Ensembl:ENSGALT00000036125 Uniprot:H9L351
Length = 254
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 37 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 96
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 97 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 130
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 167 (63.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 36/117 (30%), Positives = 71/117 (60%)
Query: 21 SAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETF 80
++M++L + +++ + + LL G +HH+G+ + + ++E LF + I+ L +T T
Sbjct: 757 ASMEVLRTEAEQVKN-TELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATL 815
Query: 81 SIGLNMPAKTVVFTNVRKFDGDKFRWI--SSGEYIQMSGRAGRRGIDERGICILMVD 135
+ G+N+PA TV+ + ++ +K RW+ S+ + +QM GRAGR D +G IL+ +
Sbjct: 816 AWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITN 872
Score = 60 (26.2 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 36/156 (23%), Positives = 66/156 (42%)
Query: 303 NYT-VNILTRCVVSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPM----PK 357
NYT + + + + SK + L+I+ E +VV Q+++ S RLP P
Sbjct: 1824 NYTTIELFSLSLNSKTKV-RGLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLTGPN 1882
Query: 358 DLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEI 417
+ P + + +K T+ L + S L L PE G K +R I+A + +
Sbjct: 1883 ETAP-KFNDPHIK-TNLLLQAHLSRLQLGPELQ-GDTEQILSKAIRLIQACVDVLSSNGW 1939
Query: 418 SKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTEL 453
+ +L + + Q + +K +K+ S E+
Sbjct: 1940 LSPAVAAMELAQM-VTQAMWSKDSYLKQLPHFSPEI 1974
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 177 (67.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 40/135 (29%), Positives = 77/135 (57%)
Query: 11 EKVNIETIFWSAM-DMLSDDDKKL--PQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQ 67
EK++I+ + + ++L + + + P++ ++P RG G+HH+GL + V+E LF
Sbjct: 631 EKLDIDIVEQEGVKEILKQEGESMSNPKLKEVIP---RGFGIHHAGLTKKDRGVVEDLFA 687
Query: 68 EGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWI--SSGEYIQMSGRAGRRGID 125
+G ++ L +T T + G+N+PA TV+ + + W+ S + +QM GRAGR D
Sbjct: 688 QGYLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGAWVQLSPQDILQMLGRAGRPRYD 747
Query: 126 ERGICILMVD-DKME 139
+ G I++ D+++
Sbjct: 748 KNGEGIIITSQDEVQ 762
Score = 45 (20.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 207 RDSMVIEEEDSLKNYYNLLQQYKSLKK---DVRD-IVFSPKYCLPF 248
R++ + E + S+++ N ++ YK L K +R+ ++F+P Y F
Sbjct: 1395 RENRITEIKLSVESSDNTVKIYKDLAKVNSGLRNTLIFAPSYIHAF 1440
>SGD|S000000974 [details] [associations]
symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
conformational change to release U4 (or U4atac) and U1 (or U11)"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
GO:GO:0000388 Uniprot:P32639
Length = 2163
Score = 168 (64.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
L++ GIG HH+GL + + E LF +GL++ L T T + G+N+PA TV+ +
Sbjct: 796 LIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSP 855
Query: 102 DKFRW--ISSGEYIQMSGRAGRRGIDERGICILMVDDKMEP---STAKMMLKGSADSLNS 156
+K W +S + +QM GRAGR D G I++ D S L + ++
Sbjct: 856 EKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQFVSK 915
Query: 157 AF-HLSYNMLLNQIRCEEGSPENLLRNSFY-QFQAD---HAIPDLEKQAKVLEEERDSMV 211
+L+ ++ I+C + L Y + A + +PD+ + L++ R+S+V
Sbjct: 916 LVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKVPDISSDGQ-LKKFRESLV 974
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 163 (62.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + L G+G HH+G+ ++++E LF G + LF T T ++G+N+PA VV +
Sbjct: 303 SKLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVVIKST 362
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + D++ S
Sbjct: 363 MHYTGGAFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTREKYVQMLACNDTVES 420
Query: 157 AFH 159
+ H
Sbjct: 421 SLH 423
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 167 (63.8 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 46/133 (34%), Positives = 68/133 (51%)
Query: 7 TEDDEKVNIETIFWSAMDMLSDDDK-KLPQVSNILPLLKRGIGVHHSGLLPILKEVIEIL 65
TEDD K W MD +D + SN+ L GIG+HH+GL ++ +E L
Sbjct: 1590 TEDDPKQ------WLKMDEREMNDIIGTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEEL 1643
Query: 66 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSG--EYIQMSGRAGRRG 123
F I+ L AT T + G+N PA V+ +DG R++ + +QM GRAGR
Sbjct: 1644 FVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQ 1703
Query: 124 IDERGICILMVDD 136
D++G +++V D
Sbjct: 1704 FDDQGKAVILVHD 1716
Score = 141 (54.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 49/183 (26%), Positives = 89/183 (48%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
L G +HH+G+L + ++E LF G IK L T T + G+N+PA VV + +
Sbjct: 783 LFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAA 842
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD-DKMEPSTAKMMLKGSADS--LNS 156
+ ++ G + +Q+ GRAGR D+ G I++ DK+ + + +S L S
Sbjct: 843 KRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLES 902
Query: 157 -AFHLSYNMLLNQIRCEEGSPENLLRNSFY-QFQADHAIPDLEKQAKV----LEEERDSM 210
A +L+ + L + E + + + Y + +A+ + + +A LE+ R+ +
Sbjct: 903 LADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHREQL 962
Query: 211 VIE 213
VIE
Sbjct: 963 VIE 965
Score = 41 (19.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 390 NMGIRSSSYQKLVRRIEALESLFDKHE 416
++G +S Y IE LFD H+
Sbjct: 989 DLGRTASHYYIKYNTIETFNELFDAHK 1015
>UNIPROTKB|E3W980 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 GO:GO:0004386 EMBL:AC096768
HGNC:HGNC:18536 IPI:IPI00965172 ProteinModelPortal:E3W980
SMR:E3W980 Ensembl:ENST00000510985 UCSC:uc010ikb.3
ArrayExpress:E3W980 Bgee:E3W980 Uniprot:E3W980
Length = 1034
Score = 163 (62.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 38 NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIGLNMPAKTVV 92
N+ P+LKR G+ HHSGL ++++E + G++ CLF T T + G+N+PA+ V+
Sbjct: 560 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAGVNLPARRVI 618
Query: 93 FTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLK 148
+ +F + +Y QM GRAGR GID G IL++ +K + +++ K
Sbjct: 619 LR--APYVAKEF--LKRNQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLELITK 670
>UNIPROTKB|Q8TDG4 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AF436845 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GO:GO:0008026 EMBL:AK128665
EMBL:AC096768 EMBL:BC015428 EMBL:BC095473 EMBL:AL512702
IPI:IPI00152527 IPI:IPI00647582 IPI:IPI00807650 IPI:IPI00889496
RefSeq:NP_598375.2 UniGene:Hs.480101 ProteinModelPortal:Q8TDG4
SMR:Q8TDG4 IntAct:Q8TDG4 STRING:Q8TDG4 PhosphoSite:Q8TDG4
DMDM:296434521 PaxDb:Q8TDG4 PRIDE:Q8TDG4 DNASU:113510
Ensembl:ENST00000295488 GeneID:113510 KEGG:hsa:113510
UCSC:uc003hom.3 UCSC:uc003hoo.1 UCSC:uc003hop.1 CTD:113510
GeneCards:GC04M084328 HGNC:HGNC:18536 HPA:HPA036853 MIM:606769
neXtProt:NX_Q8TDG4 PharmGKB:PA164720529 InParanoid:Q8TDG4
OMA:SRPLENC OrthoDB:EOG4THVSJ PhylomeDB:Q8TDG4 GenomeRNAi:113510
NextBio:78853 ArrayExpress:Q8TDG4 Bgee:Q8TDG4 Genevestigator:Q8TDG4
Uniprot:Q8TDG4
Length = 1101
Score = 163 (62.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 38 NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIGLNMPAKTVV 92
N+ P+LKR G+ HHSGL ++++E + G++ CLF T T + G+N+PA+ V+
Sbjct: 627 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAGVNLPARRVI 685
Query: 93 FTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLK 148
+ +F + +Y QM GRAGR GID G IL++ +K + +++ K
Sbjct: 686 LR--APYVAKEF--LKRNQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLELITK 737
>FB|FBgn0002899 [details] [associations]
symbol:mus301 "mutagen-sensitive 301" species:7227
"Drosophila melanogaster" [GO:0007294 "germarium-derived oocyte
fate determination" evidence=IGI;IMP] [GO:0008298 "intracellular
mRNA localization" evidence=IMP;TAS] [GO:0048477 "oogenesis"
evidence=IGI;TAS] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009949 GO:GO:0007294 EMBL:AE014296 GO:GO:0006417
GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 GO:GO:0008298
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0030717 GO:GO:0016321
GO:GO:0008026 OMA:SRPLENC GO:GO:0009951 EMBL:BT011090
RefSeq:NP_648178.1 UniGene:Dm.15493 SMR:Q9VSE2 IntAct:Q9VSE2
STRING:Q9VSE2 EnsemblMetazoa:FBtr0076689 GeneID:38905
KEGG:dme:Dmel_CG7972 UCSC:CG7972-RA CTD:38905 FlyBase:FBgn0002899
InParanoid:Q9VSE2 OrthoDB:EOG4MKKXB GenomeRNAi:38905 NextBio:810944
Uniprot:Q9VSE2
Length = 1051
Score = 161 (61.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 23 MDMLSDDDKKLPQVSNILP-LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFS 81
+D++ DK +S +L L GI HHSGL ++ IE ++ G++ + T T +
Sbjct: 546 LDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLA 605
Query: 82 IGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPS 141
G+N+PAK V+ + G +F ++ +Y QM GRAGR G+ E G IL+ K
Sbjct: 606 AGVNLPAKRVIIR--APYVGQEF--LTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLL 661
Query: 142 TAKMMLKGSADSLNS 156
+M+ +L+S
Sbjct: 662 VGQMLFSPMDKALSS 676
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 173 (66.0 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 47/149 (31%), Positives = 78/149 (52%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
L GIG+HH+GL + ++E LF E I+ L +T T + G+N+PA V+ FDG
Sbjct: 1611 LSFGIGMHHAGLNDGDRTIVESLFGENKIQILISTSTLAWGVNLPAHLVIIKGTEYFDGK 1670
Query: 103 KFRWISSG--EYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKG-SADSLNSAF- 158
R++ + +QM GRAGR D+ G ++MV + + K + +S F
Sbjct: 1671 TKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHEPKKQFYKKFLYDPFPVESHLKDFL 1730
Query: 159 --HLSYNMLLNQIRCEEGSPENLLRNSFY 185
HL+ ++ I+ ++G+ N L N+F+
Sbjct: 1731 HDHLNAEIVSGTIQSKQGAI-NYLVNTFF 1758
Score = 155 (59.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/137 (31%), Positives = 68/137 (49%)
Query: 39 ILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRK 98
I L + GI VHH+GLL + V+E F G IK L T T + G+N+PA TV+ +
Sbjct: 773 IRSLFQHGISVHHAGLLRSDRNVVEKYFANGTIKVLVCTATLAWGVNLPAHTVIIKGTQV 832
Query: 99 FDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD-DKMEPSTAKMMLKGSADS-- 153
++ ++ G + +Q+ GRAGR D G L+ DK++ + M +S
Sbjct: 833 YNAKNGGFMDLGISDVMQIFGRAGRPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKF 892
Query: 154 -LNSAFHLSYNMLLNQI 169
N HL+ ++L +
Sbjct: 893 ITNLEDHLNAEIVLGTV 909
Score = 47 (21.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/94 (20%), Positives = 46/94 (48%)
Query: 431 HMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISS 490
HMK A +K++ R+ + ++ F+++L K+++ G T + + + +
Sbjct: 1372 HMKVVYIAPLKALVRERMNDWKVKFQEKLG--KKLVELTGDYTPNMIA---------LQN 1420
Query: 491 AEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQE 524
A+ +T T ++G+ ++ K V+ +S + E
Sbjct: 1421 ADIVTTTPEKWDGISRNWKNRSYVTSVSLLIIDE 1454
Score = 44 (20.5 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 172 EEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSL 231
E+ S E + N + D + DLE+ + + E D ++ + ++Y L YK++
Sbjct: 1772 EDNSVEAV--NQYLSDLLDSTLADLEQSSCIEINEYDEIIPMSMGKIASFYYL--NYKTV 1827
Query: 232 K 232
+
Sbjct: 1828 Q 1828
Score = 42 (19.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 32/165 (19%), Positives = 75/165 (45%)
Query: 375 FLAR-NASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKL---KVL 430
F +R N G L ++N +++SS +++R + + +SK+ L K+ ++
Sbjct: 1064 FFSRANIDGFSLVSDSNYTVQNSS--RILRGLFEISLKKGWCTVSKTILDLCKMVDHQLW 1121
Query: 431 HMKQELT-AKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVV-ELKGKVACEI 488
H + L AK+ S+ +R E + E + + L + + ++ + K+A +
Sbjct: 1122 HFESPLRQAKVLSLDT-IRKIEERDWTPE-RICDMEIGELSFVLGNQLIAKTTRKIAQQF 1179
Query: 489 SSAE-ELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKP 532
+ E+ + + N +++ ++L+ F W +K+ S+P
Sbjct: 1180 PQLDFEIQVQPITAN----IIRIN--MTLIPMFSWNDKMHGDSQP 1218
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 164 (62.8 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 34/99 (34%), Positives = 60/99 (60%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S++ +L G +HH+GL +E++E LF +G ++ L +T T + G+N+PA TV+
Sbjct: 796 SDLKDILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGT 855
Query: 97 RKFDGDKFRW--ISSGEYIQMSGRAGRRGIDERGICILM 133
+ ++ +K W +S + +QM GRAGR D+ G I++
Sbjct: 856 QVYNPEKGAWMELSPLDVMQMLGRAGRPQYDQHGEGIII 894
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 164 (62.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 48/145 (33%), Positives = 74/145 (51%)
Query: 1 MAKLDL-----TEDDEKVNIETIFWSAMDMLSDDDKKLPQV--SNILPLLKRGIGVHHSG 53
M KL+L TE+D K W MD + + + V SN+ L GIG+HH+G
Sbjct: 1570 MTKLELIAFLATEEDPKQ------WLNMDE-QEMENIIATVRDSNLKLTLAFGIGMHHAG 1622
Query: 54 LLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSG--E 111
L ++ +E LF ++ L AT T + G+N PA V+ +DG R++ +
Sbjct: 1623 LHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITD 1682
Query: 112 YIQMSGRAGRRGIDERGICILMVDD 136
+QM GRAGR D++G +++V D
Sbjct: 1683 VLQMMGRAGRPQFDDQGKAVILVHD 1707
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 164 (62.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 7 TEDDEKVNIETIFWSAMDMLSDDDKKLPQV--SNILPLLKRGIGVHHSGLLPILKEVIEI 64
TE+D K W MD + D + V SN+ L GIG+HH+GL ++ +E
Sbjct: 1582 TEEDPKQ------WLNMDE-QEMDNIIGTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEE 1634
Query: 65 LFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSG--EYIQMSGRAGRR 122
LF ++ L AT T + G+N PA V+ +DG R++ + +QM GRAGR
Sbjct: 1635 LFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRP 1694
Query: 123 GIDERGICILMVDD 136
D++G +++V D
Sbjct: 1695 QFDDQGKAVILVHD 1708
>MGI|MGI:2176740 [details] [associations]
symbol:Helq "helicase, POLQ-like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
[GO:0017117 "single-stranded DNA-dependent ATP-dependent DNA
helicase complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR010995 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2176740 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
SUPFAM:SSF47794 GO:GO:0017116 CTD:113510 OMA:SRPLENC
OrthoDB:EOG4THVSJ EMBL:BC082601 EMBL:BC109169 EMBL:BC109170
EMBL:AK052427 EMBL:AF436846 IPI:IPI00226287 IPI:IPI00886160
IPI:IPI00890018 RefSeq:NP_001074576.1 UniGene:Mm.21469
ProteinModelPortal:Q2VPA6 SMR:Q2VPA6 STRING:Q2VPA6
PhosphoSite:Q2VPA6 PRIDE:Q2VPA6 Ensembl:ENSMUST00000044684
GeneID:191578 KEGG:mmu:191578 UCSC:uc008yhz.1 UCSC:uc012dzs.1
HOGENOM:HOG000110747 InParanoid:Q2VPA6 NextBio:371088 Bgee:Q2VPA6
Genevestigator:Q2VPA6 GO:GO:0017117 Uniprot:Q2VPA6
Length = 1069
Score = 160 (61.4 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 40/113 (35%), Positives = 62/113 (54%)
Query: 31 KKLPQVSN--ILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGL 84
K L + N + P+LKR GI HHSGL ++++E + G++ L T T + G+
Sbjct: 577 KSLRNIGNGKVCPVLKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGV 636
Query: 85 NMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
N+PA+ V+ + + F + +Y QM GRAGR GID G IL++ +K
Sbjct: 637 NLPARRVILR--APYVANTF--LKRNQYKQMVGRAGRAGIDTAGESILLLQEK 685
>UNIPROTKB|G4MUH1 [details] [associations]
symbol:MGG_07250 "DEAD/DEAH box helicase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM001232
GO:GO:0008026 RefSeq:XP_003715470.1 EnsemblFungi:MGG_07250T0
GeneID:2682996 KEGG:mgr:MGG_07250 Uniprot:G4MUH1
Length = 1771
Score = 173 (66.0 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 37/86 (43%), Positives = 55/86 (63%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
L+RG+GVHH+G+ ++V+E+L + G + + AT T ++G+N+P KTVVF+ F
Sbjct: 1213 LRRGVGVHHAGMNRKYRQVVEMLCRRGFLTVVIATGTLALGINVPCKTVVFSEDSVF--- 1269
Query: 103 KFRWISSGEYIQMSGRAGRRGIDERG 128
+S+ Y Q SGRAGRRG D G
Sbjct: 1270 ----LSALNYRQASGRAGRRGFDLLG 1291
Score = 41 (19.5 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 336 LVVSVPISQIIKLSSARLPMPKDLLPLQT 364
+V ++P + ++ S+RLP + P+ T
Sbjct: 1293 VVFNIPTHRSFEIMSSRLPDLRGQFPVST 1321
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 163 (62.4 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 38 NILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVR 97
N+ L GIG+HH+GL ++ +E LF I+ L AT T + G+N+PA VV
Sbjct: 1618 NLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLVVIKGTE 1677
Query: 98 KFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDDK 137
FDG +++ + +QM GRAGR D G+ +++V D+
Sbjct: 1678 YFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDE 1719
Score = 141 (54.7 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 39 ILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRK 98
++ L G+ +HH+G+L ++++E F EG I L T T + G+N+PA V+
Sbjct: 781 LVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDI 840
Query: 99 FDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD-DKM 138
+D ++ G + +Q+ GRAGR D+ G+ ++ DK+
Sbjct: 841 YDAKHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKL 883
Score = 43 (20.2 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 477 VVELKGKVACEISSAEELTL---TELIFNGVLKDVKVEEMVSLLSCFVWQE 524
VVEL G V +I + E L T ++G+ + + E V +S V E
Sbjct: 1415 VVELTGDVTPDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVIDE 1465
Score = 42 (19.8 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 198 KQAKVLEEERDSMVIEEEDSLKNYYNLLQQY 228
+Q KV ++E +EE D LKN Y ++ Y
Sbjct: 1032 QQLKVRDDE-----MEELDELKNAYCKIKPY 1057
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 163 (62.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
SN+ L GIG+HH+GL ++ +E LF I+ L AT T + G+N PA V+
Sbjct: 1606 SNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGT 1665
Query: 97 RKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDD 136
+DG R++ + +QM GRAGR D++G +++V D
Sbjct: 1666 EYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 140 (54.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 49/190 (25%), Positives = 92/190 (48%)
Query: 35 QVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFT 94
QV + P G +HH+G+L + ++E LF G IK L T T + G+N+PA V+
Sbjct: 770 QVRELFP---DGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIK 826
Query: 95 NVRKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD-DKMEPSTAKMMLKGSA 151
+ + + ++ G + +Q+ GRAGR D+ G I++ DK+ + + +
Sbjct: 827 GTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPI 886
Query: 152 DS--LNS-AFHLSYNMLLNQIRCEEGSPENLLRNSFY-QFQADHAIPDLEKQA----KVL 203
+S L S A +L+ + L + E + + + Y + +A+ + + +A L
Sbjct: 887 ESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTL 946
Query: 204 EEERDSMVIE 213
+ R+ +VIE
Sbjct: 947 AKHREQLVIE 956
Score = 41 (19.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 390 NMGIRSSSYQKLVRRIEALESLFDKHE 416
++G +S Y IE LFD H+
Sbjct: 980 DLGRTASHYYIKYNTIETFNELFDAHK 1006
>UNIPROTKB|F1PXD9 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AAEX03017021 Ensembl:ENSCAFT00000018256
OMA:NECHITF Uniprot:F1PXD9
Length = 1835
Score = 162 (62.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 46/134 (34%), Positives = 69/134 (51%)
Query: 23 MDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSI 82
MD L L V + + G+ HH+GL +++IE F++G I+ L AT T S
Sbjct: 300 MDQLKRSPSGLDSV--LQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSS 357
Query: 83 GLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPST 142
G+N+PA+ V+ F G ++ Y QM GRAGR+G+D G IL+ + E S
Sbjct: 358 GVNLPARRVII-RTPIFGGQPLDILT---YKQMVGRAGRKGVDTVGESILVCKNS-EKSK 412
Query: 143 AKMMLKGSADSLNS 156
+L+GS + S
Sbjct: 413 GIALLQGSLKPVRS 426
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 162 (62.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
SN+ L GIG+HH+GL ++ +E LF ++ L AT T + G+N PA V+
Sbjct: 1606 SNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGT 1665
Query: 97 RKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDD 136
+DG R++ + +QM GRAGR D++G +++V D
Sbjct: 1666 EYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
>ZFIN|ZDB-GENE-060503-421 [details] [associations]
symbol:helq "helicase, POLQ-like" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR010995 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060503-421 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
EMBL:BX649525 CTD:113510 IPI:IPI00799443 RefSeq:XP_691411.3
UniGene:Dr.86132 Ensembl:ENSDART00000109412 GeneID:562952
KEGG:dre:562952 NextBio:20884669 Uniprot:F1Q4P2
Length = 1010
Score = 161 (61.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/114 (34%), Positives = 66/114 (57%)
Query: 38 NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVF 93
++ P+L++ G+ HHSGL ++++E + G++ L T T + G+N+PA+ V+
Sbjct: 548 SLCPVLQKTIPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVIL 607
Query: 94 TNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMML 147
+ + F + +Y QM GRAGR GID G IL++ DK + +TAK +L
Sbjct: 608 RS--PYVAADF--LKRSQYKQMVGRAGRAGIDAMGESILILQDK-DINTAKKLL 656
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 177 ENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVI 212
ENL + YQ A + EK A+ L+EE D +++
Sbjct: 968 ENLFKKQAYQIIASAKMLLTEK-AEALQEEVDDLLM 1002
Score = 38 (18.4 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 422 LIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELK 481
L+ L ++ +K +T ++ +K M+ T L ++ + ++ L L T + + LK
Sbjct: 675 LLSLILSLIGLK--ITTTVEQVKDLMKG-TFLGVQEAQVSPEKSLWDL---TVESIQTLK 728
Query: 482 GKVACEISSAE 492
K E+SS E
Sbjct: 729 QKNLIEVSSDE 739
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 162 (62.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
SN+ L GIG+HH+GL ++ +E LF ++ L AT T + G+N PA V+
Sbjct: 1606 SNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGT 1665
Query: 97 RKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDD 136
+DG R++ + +QM GRAGR D++G +++V D
Sbjct: 1666 EYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 162 (62.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
SN+ L GIG+HH+GL ++ +E LF ++ L AT T + G+N PA V+
Sbjct: 1606 SNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGT 1665
Query: 97 RKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGICILMVDD 136
+DG R++ + +QM GRAGR D++G +++V D
Sbjct: 1666 EYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
>UNIPROTKB|J9P160 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 CTD:113510 EMBL:AAEX03016730 RefSeq:XP_544959.2
Ensembl:ENSCAFT00000044378 GeneID:487837 KEGG:cfa:487837
Uniprot:J9P160
Length = 1072
Score = 165 (63.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 42/114 (36%), Positives = 65/114 (57%)
Query: 31 KKLPQVS--NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIG 83
K L +S N+ P+LKR G+ HHSGL ++++E + G++ CLF T T + G
Sbjct: 590 KNLKNISSGNLCPILKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAG 648
Query: 84 LNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
+N+PA+ V+ + +F + +Y QM GRAGR GID G IL++ +K
Sbjct: 649 VNLPARRVILR--APYVAKEF--LKRNQYKQMIGRAGRAGIDSIGESILILQEK 698
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 359 LLPLQTRENMLKSTSE-FLARNASGLPLDPEANMGIRSSSYQKLV 402
L P + L SE F+ + ASG P+ + + I + Y V
Sbjct: 868 LSPAEQNVAALLGVSENFIGKKASGQPIKKKVDKDIVNRLYLSFV 912
>UNIPROTKB|E2RST3 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 OMA:SRPLENC EMBL:AAEX03016730
Ensembl:ENSCAFT00000014486 Uniprot:E2RST3
Length = 1106
Score = 165 (63.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/114 (36%), Positives = 65/114 (57%)
Query: 31 KKLPQVS--NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIG 83
K L +S N+ P+LKR G+ HHSGL ++++E + G++ CLF T T + G
Sbjct: 624 KNLKNISSGNLCPILKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAG 682
Query: 84 LNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
+N+PA+ V+ + +F + +Y QM GRAGR GID G IL++ +K
Sbjct: 683 VNLPARRVILR--APYVAKEF--LKRNQYKQMIGRAGRAGIDSIGESILILQEK 732
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 359 LLPLQTRENMLKSTSE-FLARNASGLPLDPEANMGIRSSSYQKLV 402
L P + L SE F+ + ASG P+ + + I + Y V
Sbjct: 902 LSPAEQNVAALLGVSENFIGKKASGQPIKKKVDKDIVNRLYLSFV 946
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/215 (25%), Positives = 97/215 (45%)
Query: 46 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFR 105
GIG HH+G+ +++ E F G + LF T T ++G+NMPA VV + + G
Sbjct: 312 GIGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIKSTMHYVGGACE 371
Query: 106 WISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNML 165
S + +QM GRAGR D ++M + + M D + S+ H +
Sbjct: 372 EYSEADLLQMIGRAGRPQFDTTATAVIMT--RPQTKDKYMHFLSGLDCIESSLHTNLVEH 429
Query: 166 LN-QIRCEEGSPENL----LRNSFYQFQA----DHA--IPDLEKQAKVLEEERDSMVIEE 214
LN +I S N+ +R++F +A H P+++K +E + + ++
Sbjct: 430 LNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHYGFPPEVDKCG--IETKLQELCLKN 487
Query: 215 EDSLKNYYNLLQQYKSLK-KDVRDIVFSPKYCLPF 248
+SL ++ NL+ + + K +YC+ F
Sbjct: 488 LNSLASF-NLITMDEDINIKPTETGKLMARYCVAF 521
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 161 (61.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 35/112 (31%), Positives = 63/112 (56%)
Query: 30 DKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAK 89
D K + + L+ +G+G+HH+G+ + ++E LF EG++K L T T + G+N+PA
Sbjct: 588 DMKTCKARELRDLVPKGMGIHHAGMTRSDRNLMERLFAEGVLKVLCCTATLAWGVNLPAA 647
Query: 90 TVVFTNVRKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGI-CILMVDDKM 138
VV + + + +++ G + +Q+ GRAGR ++ GI I DK+
Sbjct: 648 AVVIKGTQVYSAQEGKFVDLGILDVLQIFGRAGRPQFEDTGIGMICTTADKL 699
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 46 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG--DK 103
GIG+HH+GL+ +++ E LF I+ L AT T + G+N+PA VV + +D +
Sbjct: 1442 GIGLHHAGLVESDRQLAEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEG 1501
Query: 104 FRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYN 163
++ + + +QM GRAGR D G+ + D + + G + S+ H
Sbjct: 1502 YKDMDLTDVLQMLGRAGRPQFDNSGVARIFTQDSKKDFYKHFLHTGFP--VESSLH---T 1556
Query: 164 MLLNQIRCEEGSPENLL 180
+L N + C E S E ++
Sbjct: 1557 VLDNHL-CAEISAETII 1572
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 157 (60.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 46 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFR 105
G+ HH+GL ++++E F++G I+ L AT T S G+N+PA+ V+ F+G
Sbjct: 615 GVAFHHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVII-RTPVFNGHLLD 673
Query: 106 WISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
++ Y QM GRAGR+G+D G +L+ + E + +++GS ++S
Sbjct: 674 ILT---YKQMVGRAGRKGVDTIGESVLVCKEA-ERAKGMSLIQGSLKPISS 720
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/90 (20%), Positives = 43/90 (47%)
Query: 331 ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEAN 390
E G+ L+++V +++ +++ L PL++ N+ K+ + S P+
Sbjct: 1128 EGGQDLMLNVTEEKLLLENNSNNNSHPPLRPLESTTNLEKTMD--VDSGVSSAECQPDKK 1185
Query: 391 MGIRSSSYQKLVRRIEALESLFDKHEISKS 420
++SS K+++ I A + D ++ +S
Sbjct: 1186 CELQSSVLHKVLKSINAKDKGCDNNQTVES 1215
Score = 42 (19.8 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 315 SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL 359
S+D + K+ P + P V P++ +K++++ + PK++
Sbjct: 1728 SEDFVTVQAKKVTP-SDLVPPTQVLEPVTPRVKMTTSAIQSPKNV 1771
Score = 37 (18.1 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 178 NLLRNSFYQFQADHAIPDLEKQAKVLEEE 206
N++R + Q D + KQ+ LE+E
Sbjct: 1427 NVVRENKQDNQVDSTSEKVVKQSSFLEKE 1455
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 160 (61.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 774 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 833
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 834 EKGRWTELGALDILQMLGRAGRPQYDSKGEGILI 867
Score = 128 (50.1 bits), Expect = 0.00056, P = 0.00056
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 43 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 102
L G+G H GL P + ++E LF G I+ + A+ + G N+ A V+ + + ++G
Sbjct: 1609 LSNGVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVIVMDTQYYNGK 1668
Query: 103 KFRWISSGEY--IQMSGRAGRRGIDERGICILM 133
++ Y +QM G+A R D+ G C++M
Sbjct: 1669 IHAYVDYPIYDVLQMVGKANRPLQDDEGRCVIM 1701
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 159 (61.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 35/118 (29%), Positives = 60/118 (50%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
+L G+ HH+G+ ++V+E F G I LF T T ++G+N+PA VV + + G
Sbjct: 581 ILIHGVAYHHAGMELSDRKVVEGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAG 640
Query: 102 DKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNSAFH 159
F S + +QM GRAGR D ++M ++ + + +D++ S+ H
Sbjct: 641 GMFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTKEKYIQMLACSDTIESSLH 696
Score = 48 (22.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFV 255
+Q KS D++D F+PK LP + ++
Sbjct: 1199 MQMNKSPSVDLKDFGFAPKPSLPSIARSEYL 1229
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 168 (64.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 47/131 (35%), Positives = 73/131 (55%)
Query: 28 DDDKKLPQ-VSNILP-LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLN 85
D ++LP + ++L + G+ HH+GL +++IE F++GLI+ L AT T S G+N
Sbjct: 392 DQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVN 451
Query: 86 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 145
+PA+ V+ F G R + Y QM GRAGR+G+D G IL+ + E S
Sbjct: 452 LPARRVII-RTPIFGG---RPLDILTYKQMVGRAGRKGVDTVGESILICKNS-EKSKGIA 506
Query: 146 MLKGSADSLNS 156
+L+GS + S
Sbjct: 507 LLQGSLKPVRS 517
Score = 44 (20.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 220 NYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQ 250
N N L Q ++L+ R + +YCL L+
Sbjct: 2058 NQLNSLLQKENLQDVFRKVEMPSQYCLALLE 2088
Score = 40 (19.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 411 LFDKHEISKSPLIEQKLKVLHMKQELTAKIKS 442
LFD S L++++L + MK+ L +++ S
Sbjct: 1490 LFDS--FSDDYLVKEQLPDMQMKEPLPSEVTS 1519
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 170 (64.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ LF+T T + G+N+PA TV+ + ++
Sbjct: 770 LLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNP 829
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD 135
+K RW G + +QM GRAGR D+RG IL+ +
Sbjct: 830 EKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITN 865
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/67 (20%), Positives = 32/67 (47%)
Query: 501 FNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQ 560
F +L D++ E + +SC V L + + P++ + ++ + A +V V Q
Sbjct: 1596 FQALLADIEDESLRESVSCGVGF--LHEGTAPKD-VHIVQQLFESNAIQVCVVPRGMCYQ 1652
Query: 561 IDVEGFV 567
I++ ++
Sbjct: 1653 IEMSAYL 1659
Score = 37 (18.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 431 HMKQELTAKIKSIKRQMRSSTELAFKDEL 459
H+ L+ ++ + + +S +A KDE+
Sbjct: 1779 HLSDALSELVELTLKDLENSKCIAVKDEM 1807
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 170 (64.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ LF+T T + G+N+PA TV+ + ++
Sbjct: 770 LLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNP 829
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILMVD 135
+K RW G + +QM GRAGR D+RG IL+ +
Sbjct: 830 EKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITN 865
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/67 (20%), Positives = 32/67 (47%)
Query: 501 FNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQ 560
F +L D++ E + +SC V L + + P++ + ++ + A +V V Q
Sbjct: 1596 FQALLADIEDESLRESVSCGVGF--LHEGTAPKD-VHIVQQLFESNAIQVCVVPRGMCYQ 1652
Query: 561 IDVEGFV 567
I++ ++
Sbjct: 1653 IEMSAYL 1659
Score = 37 (18.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 431 HMKQELTAKIKSIKRQMRSSTELAFKDEL 459
H+ L+ ++ + + +S +A KDE+
Sbjct: 1779 HLSDALSELVELTLKDLENSKCIAVKDEM 1807
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 157 (60.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + +LK G HH+G+ ++V+E F G + LF T T ++G+N+PA VV +
Sbjct: 252 SKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 311
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + D++ S
Sbjct: 312 MHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTRDKYIQMLACRDTVES 369
Query: 157 AFH 159
+ H
Sbjct: 370 SLH 372
Score = 47 (21.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCI 257
+Q KS D+++ F+PK LP + ++ I
Sbjct: 876 IQMNKSQSVDLKEFGFTPKPSLPSISRSEYLNI 908
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 482 GKVACEISSAEELTLTELIFNGVLKDVKVEEMVS 515
G C+I A++ + E + L D++ VS
Sbjct: 833 GHDCCKIGVAQKSEIKESTISSYLSDLRNRNAVS 866
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 165 (63.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 41/113 (36%), Positives = 67/113 (59%)
Query: 26 LSDDDKK--LPQVSN-ILPL-LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFS 81
+SDD+ + L V + L L L+ G+G+HH+GL+ +++ LF++G I+ L AT T +
Sbjct: 1378 ISDDELQDILENVKDDTLRLSLQFGMGLHHAGLVESDRQISHKLFEQGKIQILIATSTLA 1437
Query: 82 IGLNMPAKTVVFTNVRKFDG--DKFRWISSGEYIQMSGRAGRRGIDERGICIL 132
G+N+PA V+ + FD + +R + + +QM GRAGR D GI I+
Sbjct: 1438 WGVNLPAHLVIIKGTQFFDAKIEAYRDMDLTDILQMMGRAGRPAYDTSGIAIV 1490
Score = 148 (57.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
L G GVHH+G+L + + E +F+ G IK L T T + G+N+PA V+ + +D
Sbjct: 563 LFVHGFGVHHAGMLRSDRNLTEKMFESGAIKVLCCTATLAWGVNLPAAVVIVKGTQVYDS 622
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILMV-DDKME 139
++ G + IQ+ GRAGR ++ G IL DK++
Sbjct: 623 KAGGFVDLGISDVIQIFGRAGRPQYEKFGTGILCTTSDKLD 663
Score = 52 (23.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 26/111 (23%), Positives = 52/111 (46%)
Query: 450 STELAFKDELKA--RKRV---LRRLGYATSDDVVELKGK---VACEISSAEELTLTELIF 501
S+++ + +KA R+RV R+ TS +VEL G E+ A+ + T F
Sbjct: 1159 SSKVVYIAPMKALVRERVDDWRERICKNTSHRLVELTGDSLPTIQEVKEADIIITTPEKF 1218
Query: 502 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAK 552
+G+ ++ + + V +S + E AS LE++ +++ + + K
Sbjct: 1219 DGISRNWQTRKFVQQVSLVIMDEIHLLASDRGPILEMIVSRMNYISSQTKK 1269
Score = 43 (20.2 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 481 KGKVACEISSAEELTLTELIFNGVLK--DVKVEEMVSLL 517
KG VAC++ ++L EL V D+ + +SLL
Sbjct: 1891 KGIVACDLDIPDDLFGKELYLECVNDGLDIAYSKKISLL 1929
Score = 40 (19.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/111 (20%), Positives = 48/111 (43%)
Query: 522 WQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAW 581
W+E +D S E++FT A+R+ +Q+ + D +F P + +
Sbjct: 726 WKELQEDPSLTNRRREMVFT----CAKRLHHLQM---IIFDENS--EAFTPKDLGRI--- 773
Query: 582 AKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAK--SIGETELEAK 630
S FY + +F ++ + ++L + ++++ SI E E+K
Sbjct: 774 --ASDFYLLSNSVEIFN-QMMNPLATEADILSMISMSSEFDSIKFREEESK 821
>UNIPROTKB|E9PT19 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1560216
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 IPI:IPI00958253 Ensembl:ENSRNOT00000002974
ArrayExpress:E9PT19 Uniprot:E9PT19
Length = 879
Score = 159 (61.0 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 31 KKLPQVSN--ILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIG 83
K L V + + P+LKR G+ HHSGL ++++E + G++ CLF T T + G
Sbjct: 573 KSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAG 631
Query: 84 LNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTA 143
+N+PA+ V+ + + F + +Y QM GRAGR GID G IL++ +K +
Sbjct: 632 VNLPARRVILR--APYVANTF--LKRNQYKQMIGRAGRAGIDTAGESILLLQEK-DKQQV 686
Query: 144 KMMLKGSADSLNSAFHL 160
++ G + +S HL
Sbjct: 687 LGLINGPLEDCHS--HL 701
Score = 41 (19.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 275 QVTWGVVIEFEKVKGVYEDDANKKPEDS 302
+VT G +E KG+ + D++ PE+S
Sbjct: 752 EVTVGA-LEHLTEKGLLQKDSHGSPEES 778
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 159 (61.0 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + +L G+ HH+G+ ++V+E F G + LF T T ++G+N+PA VV +
Sbjct: 574 SKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 633
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + +D++ S
Sbjct: 634 MHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTKEKYIQMLACSDTVES 691
Query: 157 AFH 159
+ H
Sbjct: 692 SLH 694
Score = 46 (21.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEF 284
+Q KS D+++ F+PK +P + R C+ N P S + + ++
Sbjct: 1197 MQMNKSRSVDLKEFGFTPKPSVPSIS--RSECL-------NIPGLSVMEERDQRDFCVKV 1247
Query: 285 EKVKGVYED 293
++ YED
Sbjct: 1248 QQEPSEYED 1256
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 289 GVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKI-------VPLKESG---EPLVV 338
GV + K+P S+Y ++ R VS K+ LK+ V LKE G +P V
Sbjct: 1161 GVAQKSETKEPTISSYLSDLRNRNAVSSLPPVKR-LKMQMNKSRSVDLKEFGFTPKPSVP 1219
Query: 339 SVPISQIIKLSSARLPMPKD 358
S+ S+ + + + +D
Sbjct: 1220 SISRSECLNIPGLSVMEERD 1239
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 153 (58.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 45 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKF 104
+G+G H+ GL + ++E LF G I+ + T T + G+N+PA TVV + + F+ +K
Sbjct: 335 QGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKG 394
Query: 105 RWIS--SGEYIQMSGRAGRRGIDERGICILM 133
++ +QMSGRAGR D+ G+ I+M
Sbjct: 395 HYMEYDRSTLLQMSGRAGRPPFDDTGMVIIM 425
>UNIPROTKB|F1NMU1 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
Length = 904
Score = 162 (62.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 24 DMLSDDDKKLPQVSNILP-LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSI 82
++L + L + ++L L G+ HH+GL +++IE F++ I+ L AT T S
Sbjct: 354 EVLDQLRRSLSGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQSTIRVLAATSTLSS 413
Query: 83 GLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPST 142
G+N+PA+ V+ F G ++ Y QM+GRAGR+G+D G IL+ E S
Sbjct: 414 GVNLPARRVII-RTPMFGGTLLDVLT---YKQMAGRAGRKGVDTEGESILVCKPS-ERSK 468
Query: 143 AKMMLKGSADSLNS 156
+L+GS + S
Sbjct: 469 GTALLQGSLKPVRS 482
Score = 38 (18.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 26/133 (19%), Positives = 53/133 (39%)
Query: 406 EALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKAR-KR 464
EA+E D KS ++E L ++++ + +I ++L A KR
Sbjct: 592 EAMEIFSDLQRAMKSFVLENDLHIVYLVTPVYEDWTTIDWYQF----FCLWEKLPASMKR 647
Query: 465 VLRRLGYATSDDVVELKGKVACEISSA-EELTL-----TELIFNGVLKDVKVEEMVSLLS 518
V +G +KGK+ + ++ + T L ++ +V +++M
Sbjct: 648 VAELVGIEEGFLARSVKGKITAKTEKQYRQMAIHKRFFTSLALLDLISEVPLKDMTKKYG 707
Query: 519 CFVWQ-EKLQDAS 530
C Q + LQ ++
Sbjct: 708 CSRGQLQSLQQSA 720
Score = 37 (18.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 575 MEAVYAWAKGSKFYEIME 592
+EA AW ++F +++E
Sbjct: 547 IEACIAWLLENEFIQVLE 564
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 159 (61.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + +L G+ HH+G+ ++V+E F G + LF T T ++G+N+PA VV +
Sbjct: 574 SKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 633
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + +D++ S
Sbjct: 634 MHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTKEKYIQMLACSDTVES 691
Query: 157 AFH 159
+ H
Sbjct: 692 SLH 694
Score = 46 (21.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDNSPSFSTEDHQVTWGVVIEF 284
+Q KS D+++ F+PK +P + R C+ N P S + + ++
Sbjct: 1197 MQMNKSRSVDLKEFGFTPKPSVPSIS--RSECL-------NIPGLSVMEERDQRDFCVKV 1247
Query: 285 EKVKGVYED 293
++ YED
Sbjct: 1248 QQEPSEYED 1256
Score = 43 (20.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 289 GVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKI-------VPLKESG---EPLVV 338
GV + K+P S+Y ++ R VS K+ LK+ V LKE G +P V
Sbjct: 1161 GVAQKSETKEPTISSYLSDLRNRNAVSSLPPVKR-LKMQMNKSRSVDLKEFGFTPKPSVP 1219
Query: 339 SVPISQIIKLSSARLPMPKD 358
S+ S+ + + + +D
Sbjct: 1220 SISRSECLNIPGLSVMEERD 1239
>UNIPROTKB|F1NYH9 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:AADN02009041 IPI:IPI00596471
Ensembl:ENSGALT00000018274 Uniprot:F1NYH9
Length = 995
Score = 158 (60.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 42/114 (36%), Positives = 63/114 (55%)
Query: 31 KKLPQVSN--ILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIG 83
K L + N I P+L++ G+ HHSGL ++ IE + G++ CL A T T + G
Sbjct: 525 KNLKDIGNGSICPVLRQTIPFGVAYHHSGLTNDERKSIEEAYSRGVL-CLLACTATLAAG 583
Query: 84 LNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
+N+PA+ V+ + +F + +Y QM GRAGR GID G IL+V +K
Sbjct: 584 VNLPARRVILR--APYVASEF--LKKNQYKQMIGRAGRAGIDNAGESILVVQEK 633
Score = 43 (20.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 611 VLQQLILAAKSIGET---ELEAKFEEAVSKIK 639
V QQL+L KS+ E ELE E+ + K K
Sbjct: 691 VQQQLLLKEKSLSEIVRDELENLIEKGLLKGK 722
Score = 43 (20.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 126 ERGICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSY-NMLLNQIR 170
E+G+ + D+ ST + L G A + + +SY N+L ++R
Sbjct: 715 EKGLLKGKIMDQNSKSTLTVTLLGKA-TYKGSIDVSYCNLLYKELR 759
Score = 40 (19.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 429 VLHMKQELTAKIKSIKRQMRSSTE-LAFKDELKARKRVLRRLGYATSDDVVELKGKVACE 487
+L ++Q+L K KS+ +R E L K LK + ++ + +T V L GK +
Sbjct: 688 LLGVQQQLLLKEKSLSEIVRDELENLIEKGLLKGK--IMDQNSKSTL--TVTLLGKATYK 743
Query: 488 ISSAEELTLTELIFNGVLKDVK---VEEMVSLLSCFVWQEKLQDASKPREELELL-FTQL 543
S +++ L++ + K ++ +E + LL + + + S P + L F QL
Sbjct: 744 GSI--DVSYCNLLYKELRKGLEGLVLESSLHLLYLATPYDMVSNCS-PDWMIYLRQFNQL 800
Query: 544 QDTARRVA 551
++VA
Sbjct: 801 SSAEQKVA 808
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 133 MVDDKMEPSTAKMMLKGSADSLNSAFHLSYNML 165
+V D++E K +LKG NS L+ +L
Sbjct: 705 IVRDELENLIEKGLLKGKIMDQNSKSTLTVTLL 737
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 155 (59.6 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 41/113 (36%), Positives = 65/113 (57%)
Query: 28 DDDKKLP----QVSN-ILPL-LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFS 81
DD+++L QV++ L L L+ GIG+HH+GL+ + + LFQ+ I+ L AT T +
Sbjct: 1406 DDEEELQYYLSQVTDDTLKLSLQFGIGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLA 1465
Query: 82 IGLNMPAKTVVFTNVRKFDG--DKFRWISSGEYIQMSGRAGRRGIDERGICIL 132
G+N+PA V+ + FD + +R + + +QM GRAGR D G I+
Sbjct: 1466 WGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIV 1518
Score = 141 (54.7 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 46 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFR 105
G G+HH+G+ + + E +F++G IK L T T + G+N+PA V+ + +D K
Sbjct: 594 GFGIHHAGMARSDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGG 653
Query: 106 WISSG--EYIQMSGRAGRRGIDE-RGICILMV-DDKME 139
+I G + IQ+ GR GR G G IL +D+++
Sbjct: 654 FIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDRLD 691
Score = 46 (21.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 320 GKKTLKIVPLK-------ESGEPLVVSVPISQIIKLSSARLPMPKDL 359
GKK + I P+K + + V ++++L+ LP PKD+
Sbjct: 1185 GKKIVYIAPMKALVRERVDDWRKKITPVTGDKVVELTGDSLPDPKDV 1231
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 155 (59.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 40/117 (34%), Positives = 64/117 (54%)
Query: 26 LSDDDKKL--PQVSN--ILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFS 81
+S+DD +L +V + + L GIG+HH+GL+ +++ E LF I+ L AT T +
Sbjct: 1397 MSEDDLQLNLERVKDDALREALSFGIGLHHAGLVESDRQLAEELFANNKIQILVATSTLA 1456
Query: 82 IGLNMPAKTVVFTNVRKFDG--DKFRWISSGEYIQMSGRAGRRGIDERGICILMVDD 136
G+N+PA VV + FD + ++ + + +QM GRAGR D GI + D
Sbjct: 1457 WGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDVLQMLGRAGRPQFDSSGIARIFTQD 1513
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 161 (61.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + LL G+ HH+G+ ++V+E F G + LF T T ++G+N+PA VV +
Sbjct: 575 SKLRDLLIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 634
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + +D++ S
Sbjct: 635 MHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTKEKYIQMLACSDTVES 692
Query: 157 AFH 159
+ H
Sbjct: 693 SLH 695
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCI 257
+Q KS D+++ F+P+ LP L R C+
Sbjct: 1198 MQMNKSQSVDLKEFGFTPQPSLPSLS--RSECL 1228
>UNIPROTKB|E9PSY5 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1560216 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI01007603 Ensembl:ENSRNOT00000031633 ArrayExpress:E9PSY5
Uniprot:E9PSY5
Length = 805
Score = 159 (61.0 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 31 KKLPQVSN--ILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFA-TETFSIG 83
K L V + + P+LKR G+ HHSGL ++++E + G++ CLF T T + G
Sbjct: 573 KSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL-CLFTCTSTLAAG 631
Query: 84 LNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTA 143
+N+PA+ V+ + + F + +Y QM GRAGR GID G IL++ +K +
Sbjct: 632 VNLPARRVILR--APYVANTF--LKRNQYKQMIGRAGRAGIDTAGESILLLQEK-DKQQV 686
Query: 144 KMMLKGSADSLNSAFHL 160
++ G + +S HL
Sbjct: 687 LGLINGPLEDCHS--HL 701
Score = 39 (18.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 286 KVKGVYEDDANKKPEDS 302
K KG+ + D++ PE+S
Sbjct: 720 KEKGLLQKDSHGSPEES 736
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 157 (60.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + +LK G HH+G+ ++V+E F G + LF T T ++G+N+PA VV +
Sbjct: 573 SKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 632
Query: 97 RKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGSADSLNS 156
+ G F S + +QM GRAGR D ++M ++ + + D++ S
Sbjct: 633 MHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMT--RLSTRDKYIQMLACRDTVES 690
Query: 157 AFH 159
+ H
Sbjct: 691 SLH 693
Score = 47 (21.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 225 LQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCI 257
+Q KS D+++ F+PK LP + ++ I
Sbjct: 1197 IQMNKSQSVDLKEFGFTPKPSLPSISRSEYLNI 1229
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 482 GKVACEISSAEELTLTELIFNGVLKDVKVEEMVS 515
G C+I A++ + E + L D++ VS
Sbjct: 1154 GHDCCKIGVAQKSEIKESTISSYLSDLRNRNAVS 1187
>UNIPROTKB|H9L343 [details] [associations]
symbol:H9L343 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0055087 "Ski complex" evidence=IEA]
InterPro:IPR025696 Pfam:PF13234 GeneTree:ENSGT00690000102154
EMBL:AADN02042840 Ensembl:ENSGALT00000036117 OMA:LLSCHEL
Uniprot:H9L343
Length = 131
Score = 124 (48.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 37/125 (29%), Positives = 56/125 (44%)
Query: 382 GLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKI 440
GLPL DP + +R + R +L + P Q ++ L A++
Sbjct: 8 GLPLLDPVGALQLRDPPAVEAAARARSLGAALGGFRCVHGPRFPQLYSQFAARRRLQAQV 67
Query: 441 KSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELI 500
+ ++ ++ S L E + R VLR LGY V+L G+VA + S EL LTEL+
Sbjct: 68 EQLQYEL-SDRSLLLLPEYRQRLGVLRALGYVADGGAVQLPGRVAA-LLSCHELLLTELL 125
Query: 501 FNGVL 505
VL
Sbjct: 126 LGNVL 130
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 154 (59.3 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 38/115 (33%), Positives = 65/115 (56%)
Query: 21 SAMDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETF 80
++ ++L K Q + + LL GIG+HH+GL + ++E LF + I+ L +T T
Sbjct: 826 ASREILRATASKQIQNAELKDLLPYGIGIHHAGLSRSDRSLVEDLFGDNRIQVLISTATL 885
Query: 81 SIGLNMPAKTVVFTNVRKFDGDKFRW--ISSGEYIQMSGRAGRRGIDERGICILM 133
+ G+N+PA TV+ + ++ +K W +S + QM GRAGR D+ G I++
Sbjct: 886 AWGVNLPAHTVIIKGTQIYNPEK-GWCELSPLDVTQMLGRAGRPPFDKEGEGIII 939
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 178 (67.7 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 10 DEKVNIETIFWSAMDMLSDDDKKLPQV-SNILPLLKRGIGVHHSGLLPILKEVIEILFQE 68
D+K +E I D L L V N +P G+ HH+GL +++IE F++
Sbjct: 384 DQKSLLEVI-----DQLKRSPSGLDSVLKNTVPW---GVAFHHAGLTFEERDIIEGAFRQ 435
Query: 69 GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERG 128
GLI+ L AT T S G+N+PA+ V+ F G ++ Y QM GRAGR+G+D G
Sbjct: 436 GLIRVLAATSTLSSGVNLPARRVII-RTPVFGGQPLDILT---YKQMVGRAGRKGVDTMG 491
Query: 129 ICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIR 170
IL+ + E S +L+GS + ++S + IR
Sbjct: 492 ESILVCKNS-EKSKGIALLQGSLEPVHSCLQSQGEVTSTMIR 532
Score = 40 (19.1 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 537 ELLFTQLQDTARRVAKV---QLECKVQIDVE 564
ELL+ ++ +VA++ ++EC +++ V+
Sbjct: 2491 ELLYEVAEEDVVQVAQIVKNEMECAIKLSVK 2521
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 200 AKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIV 239
AK L E+ M I+E D+ + +YK + +RD V
Sbjct: 2345 AKSLGEQ---MGIKENDAACYIDSFKSRYKGINHFMRDTV 2381
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 178 (67.7 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 10 DEKVNIETIFWSAMDMLSDDDKKLPQV-SNILPLLKRGIGVHHSGLLPILKEVIEILFQE 68
D+K +E I D L L V N +P G+ HH+GL +++IE F++
Sbjct: 384 DQKSLLEVI-----DQLKRSPSGLDSVLKNTVPW---GVAFHHAGLTFEERDIIEGAFRQ 435
Query: 69 GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERG 128
GLI+ L AT T S G+N+PA+ V+ F G ++ Y QM GRAGR+G+D G
Sbjct: 436 GLIRVLAATSTLSSGVNLPARRVII-RTPVFGGQPLDILT---YKQMVGRAGRKGVDTMG 491
Query: 129 ICILMVDDKMEPSTAKMMLKGSADSLNSAFHLSYNMLLNQIR 170
IL+ + E S +L+GS + ++S + IR
Sbjct: 492 ESILVCKNS-EKSKGIALLQGSLEPVHSCLQSQGEVTSTMIR 532
Score = 40 (19.1 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 537 ELLFTQLQDTARRVAKV---QLECKVQIDVE 564
ELL+ ++ +VA++ ++EC +++ V+
Sbjct: 2498 ELLYEVAEEDVVQVAQIVKNEMECAIKLSVK 2528
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 200 AKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIV 239
AK L E+ M I+E D+ + +YK + +RD V
Sbjct: 2352 AKSLGEQ---MGIKENDAACYIDSFKSRYKGINHFMRDTV 2388
>UNIPROTKB|F1SU44 [details] [associations]
symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
Length = 1027
Score = 159 (61.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 8 EDDEKVNIETIFWSAMDMLSDDD 30
E DE+ E ++ + SDDD
Sbjct: 206 ESDEEEGDEDVYGEVREEASDDD 228
>GENEDB_PFALCIPARUM|PFD1060w [details] [associations]
symbol:PFD1060w "u5 small nuclear
ribonucleoprotein-specific protein, putative" species:5833
"Plasmodium falciparum" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 167 (63.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/116 (34%), Positives = 68/116 (58%)
Query: 25 MLSDDDKKL-PQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIG 83
+LS+ + + ++ ILP G G+HH+GL + ++++E LF + I+ L T T + G
Sbjct: 1083 LLSEKEHVINEELKEILPF---GFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAWG 1139
Query: 84 LNMPAKTVVF--TNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
+N+PA TV+ T+V + F +SS + +QM GR+GR D+ G I++ D K
Sbjct: 1140 INLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHK 1195
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 221 YYNLLQQYKSLKKDVRDIVFSPK 243
+YN + Y +KDV I+ K
Sbjct: 1797 FYNFINTYIKKEKDVYKIINDKK 1819
>UNIPROTKB|Q8IFP1 [details] [associations]
symbol:PFD1060w "U5 small nuclear
ribonucleoprotein-specific protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 167 (63.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/116 (34%), Positives = 68/116 (58%)
Query: 25 MLSDDDKKL-PQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIG 83
+LS+ + + ++ ILP G G+HH+GL + ++++E LF + I+ L T T + G
Sbjct: 1083 LLSEKEHVINEELKEILPF---GFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAWG 1139
Query: 84 LNMPAKTVVF--TNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
+N+PA TV+ T+V + F +SS + +QM GR+GR D+ G I++ D K
Sbjct: 1140 INLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHK 1195
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 221 YYNLLQQYKSLKKDVRDIVFSPK 243
+YN + Y +KDV I+ K
Sbjct: 1797 FYNFINTYIKKEKDVYKIINDKK 1819
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 157 (60.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
+L G G+HH+GL ++ ++ LF++G I+ L T T + G+N+PA TV+ + +
Sbjct: 832 ILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTVIIKGTQVYSP 891
Query: 102 DKFRWI--SSGEYIQMSGRAGRRGIDERGICILM 133
+K W+ S + +QM GRAGR D G I++
Sbjct: 892 EKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIII 925
Score = 44 (20.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 182 NSFYQFQADHAIPDLEKQAKV--LEEERDSMVIEEEDSLKNYYNL 224
++F ++ + +L +AK+ L+EE DS+ S+ YYN+
Sbjct: 1839 STFLSELVENTLKELS-EAKIIDLDEEDDSVSPLNAASIGAYYNI 1882
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 159 (61.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 8 EDDEKVNIETIFWSAMDMLSDDD 30
E DE+ E ++ + SDDD
Sbjct: 206 ESDEEEGDEDVYGEVREEASDDD 228
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 159 (61.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 8 EDDEKVNIETIFWSAMDMLSDDD 30
E DE+ E ++ + SDDD
Sbjct: 206 ESDEEEGDEDVYGEVREEASDDD 228
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 159 (61.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 101
LL G +HH+G+ + + ++E LF + I+ L +T T + G+N+PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 102 DKFRWISSG--EYIQMSGRAGRRGIDERGICILM 133
+K RW G + +QM GRAGR D +G IL+
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 8 EDDEKVNIETIFWSAMDMLSDDD 30
E DE+ E ++ + SDDD
Sbjct: 206 ESDEEEGDEDVYGEVREEASDDD 228
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 146 (56.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 46 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD--K 103
GI +HH+GL +++ E LF ++ L AT T + G+N PA V+ +D
Sbjct: 1422 GIALHHAGLTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGG 1481
Query: 104 FRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKMMLKGS--ADS-LNSAF-- 158
++ + + +QM GRAGR D G+ + V D ++ S K L +S L+
Sbjct: 1482 YKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQD-IKKSFYKHFLHSGFPVESYLHKVLDN 1540
Query: 159 HLSYNMLLNQIRCEEGSPENLLRNSFYQ 186
HL+ + I C +G+ + L FY+
Sbjct: 1541 HLNAEIATGTIDCIQGAMDFLTCTYFYR 1568
Score = 140 (54.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 26 LSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLN 85
L+ D + + L K +G+H++G+L + + E LF G++K L T T + G+N
Sbjct: 567 LAQRDVSKSKNKELKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKILCCTATLAWGVN 626
Query: 86 MPAKTVVFTNVRKFDGDKFRWISSG--EYIQMSGRAGRRGIDERGIC-ILMVDDKM 138
+PA V+ + +D K ++ G + +Q+ GRAGR + + I+ DK+
Sbjct: 627 LPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHDKL 682
Score = 39 (18.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 6/18 (33%), Positives = 15/18 (83%)
Query: 534 EELELLFTQLQDTARRVA 551
EELE++ ++++D + ++A
Sbjct: 1401 EELEMIVSEVEDKSLKLA 1418
>UNIPROTKB|E1BMC0 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
Uniprot:E1BMC0
Length = 2728
Score = 155 (59.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 46/136 (33%), Positives = 69/136 (50%)
Query: 23 MDMLSDDDKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSI 82
MD L L V + + G+ HH+GL +++IE F++G I+ L AT T S
Sbjct: 525 MDQLKRSPSGLDSV--LQKTVPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSS 582
Query: 83 GLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGIC--ILMVDDKMEP 140
G+N+PA+ V+ F G R + Y QM GRAGR+G+D G ++V E
Sbjct: 583 GVNLPARRVII-RTPIFSG---RLLDILTYKQMVGRAGRKGVDTVGNTGESILVCKNSEK 638
Query: 141 STAKMMLKGSADSLNS 156
S +L+GS ++S
Sbjct: 639 SKGITLLQGSLKPVHS 654
Score = 46 (21.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 183 SFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYY 222
S + QA + + ++ + E+++ +VI+ + ++N Y
Sbjct: 1279 SKHVIQATSVVSENGRELAIESEKKNKVVIQNDSKIQNVY 1318
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 524 EKLQDASKPREELELLFTQLQD 545
+ +QD K RE + + + QD
Sbjct: 1090 DTMQDLDKSREHTDSFYYKFQD 1111
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 153 SLNSAFHLSYNMLLNQIRCEEGSPENLLRN-SFYQFQADHAIP 194
+++++ H + L+++ E SPE +N SF + + IP
Sbjct: 1207 TMSNSIHCEDSFTLDKMSMEFRSPEPFAKNVSFRAERRCNIIP 1249
Score = 37 (18.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 575 MEAVYAWAKGSKFYEIMEITPVFEGSL 601
+EA W ++F +I E + EG++
Sbjct: 719 IEACVMWLLENEFIQITEASDGTEGNV 745
Score = 37 (18.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 174 GSPENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEE 214
G PEN+L Q + D D K V + D +E+
Sbjct: 1415 GQPENILNTPRVQGRTDAYAADRTKNNCVSDLGLDLCDLED 1455
>UNIPROTKB|F1RVE2 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:CU467102 EMBL:CU468150 Ensembl:ENSSSCT00000010115
Uniprot:F1RVE2
Length = 1103
Score = 143 (55.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 31 KKLPQVS--NILPLLKR----GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGL 84
K L +S ++ P+LK G+ HHSGL ++++E G++ L T T + G+
Sbjct: 620 KNLKAISGGSVCPVLKHTIPFGVAYHHSGLTNDERKLLEEAHSAGVLCLLTCTSTLAAGV 679
Query: 85 NMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDK 137
N+PA+ V+ + +F + +Y QM GRAGR GID G IL+ +K
Sbjct: 680 NLPAQRVILR--APYVAKEF--LKRNQYKQMIGRAGRAGIDSVGESILIFQEK 728
>UNIPROTKB|F1SU36 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GeneTree:ENSGT00640000091272 EMBL:CU896688
Ensembl:ENSSSCT00000008906 OMA:QSSKKEF Uniprot:F1SU36
Length = 553
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + L G+G H GL P+ + ++E LF G I+ + A+ + G+N+ A V+ +
Sbjct: 24 STLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDT 83
Query: 97 RKFDGDKFRWISSGEY--IQMSGRAGRRGIDERGICILM 133
+ ++G ++ Y +QM GRA R D+ G C++M
Sbjct: 84 QYYNGKIHAYVDYPIYDVLQMVGRANRPLQDDEGRCVIM 122
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 154 (59.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/99 (32%), Positives = 60/99 (60%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
+++ LL G +HH+GL +E++E F+ G ++ L +T T + G+N+PA TV+
Sbjct: 797 NDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGT 856
Query: 97 RKFDGDKFRW--ISSGEYIQMSGRAGRRGIDERGICILM 133
+ ++ ++ W +S + +QM GRAGR D++G I++
Sbjct: 857 QVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIII 895
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 197 EKQAKVLEEERD-------SMVIEEEDSLKNYYNLLQ-QYKSLKKDVRDIVFSPKYCLPF 248
E A+V+E ++D S + NYYNLL ++ L + ++V + L
Sbjct: 1767 EVVARVIENKQDAVDYLTWSFMYRRLPQNPNYYNLLGVSHRHLSDHLSELV---ENTLSD 1823
Query: 249 LQPGRFVCIECTRGDDNSP 267
L+ + CIE D SP
Sbjct: 1824 LEVSK--CIEIDNELDLSP 1840
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 335 PLVVSVPISQIIKLSSAR-LPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGI 393
P+ +P I++ S + L P +LP+ R +L E L L P M +
Sbjct: 1282 PISEPIPPQYFIRVVSDKWLDSPT-VLPVSFRHLILP---EKYPPPTELLDLQPLPVMAL 1337
Query: 394 RSSSYQKL 401
R+ SY+ L
Sbjct: 1338 RNPSYETL 1345
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 355 MPKDLLPLQTRENMLKSTSEFLARN 379
+ KDLL + R +++ S + L +N
Sbjct: 968 LAKDLLLEERRADLIHSAATILDKN 992
>FB|FBgn0002905 [details] [associations]
symbol:mus308 "mutagen-sensitive 308" species:7227
"Drosophila melanogaster" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
Length = 2059
Score = 146 (56.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 50/174 (28%), Positives = 82/174 (47%)
Query: 50 HHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISS 109
HH+GL +++IE F+ G +K L AT T S G+N+PA+ V+ + F G + +SS
Sbjct: 547 HHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPL-FGGKQ---MSS 602
Query: 110 GEYIQMSGRAGRRGIDERGICILMVDD------------KMEPSTAKMMLKGSADSLNSA 157
Y QM GRAGR G D G IL+ ++ +++P T+ + + GS +
Sbjct: 603 LTYRQMIGRAGRMGKDTLGESILICNEINARMGRDLVVSELQPITSCLDMDGSTHLKRAL 662
Query: 158 FHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMV 211
+ + + N + L ++ F A PD E A + + D +V
Sbjct: 663 LEVISSGVANTKEDIDFFVNCTLLSAQKAFHAKEKPPDEESDANYINDALDFLV 716
Score = 45 (20.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 458 ELKARKRVLRRLGYATSDDVVELKGKVAC---EISSAEELTLTE-LIFNGVLKDVKVEEM 513
E AR+RVL ++ DD + G C ++ + + E + GV +KV+E+
Sbjct: 1470 EAAARERVLFQV-----DDTNFISGVSFCLADNVAYYWNMQIDERAAYQGVPTPLKVQEL 1524
Query: 514 VSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKV 559
+L++ + D +E+L++L + R AK++ + KV
Sbjct: 1525 CNLMARKDLTLVMHDG---KEQLKMLRKAIPQLKRISAKLE-DAKV 1566
>UNIPROTKB|B4E0P5 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
Length = 595
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 37 SNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNV 96
S + L G+G H GL P+ + ++E LF G I+ + A+ + G+N+ A V+ +
Sbjct: 134 STLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDT 193
Query: 97 RKFDGDKFRWISSGEY--IQMSGRAGRRGIDERGICILM 133
+ ++G ++ Y +QM G A R D+ G C++M
Sbjct: 194 QYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIM 232
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 151 (58.2 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 38 NILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVR 97
N+ LL G +HH+G+ ++ E LF +G I+ L +T T + G+N+PA TV+ +
Sbjct: 812 NLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQ 871
Query: 98 KFDGDKFRW--ISSGEYIQMSGRAGRRGIDERGICILM 133
+ +K W +S + +QM GRAGR D G I++
Sbjct: 872 VYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIII 909
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 337 VVSVPISQIIKLSSARLPMPKDLLPLQ 363
+ VP+S + + P P LL LQ
Sbjct: 1317 ITKVPLSFQRLIMPEKFPAPTPLLDLQ 1343
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 132 LMVDDKMEPSTAKMMLKGSADSLNSAFHL 160
L++D K + +L D+L+S HL
Sbjct: 1944 LVIDQKFILTRVHNLLGACVDTLSSEGHL 1972
>DICTYBASE|DDB_G0278827 [details] [associations]
symbol:DDB_G0278827 "Probable ATP-dependent RNA
helicase DDX60" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278827 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AAFI02000024 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 RefSeq:XP_641993.1
ProteinModelPortal:Q54XN7 EnsemblProtists:DDB0206223 GeneID:8621725
KEGG:ddi:DDB_G0278827 InParanoid:Q54XN7 OMA:RESALIC Uniprot:Q54XN7
Length = 1816
Score = 147 (56.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 24 DMLSDD-DKKLPQVSNILPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSI 82
++LS D D+K+ + + P L +GI HH G +E LF+ I+ +FAT T ++
Sbjct: 1246 NLLSSDIDEKVKK-DPLAPALTQGIAAHHGGCDKNYLRNVEYLFRSKKIQVVFATSTLAV 1304
Query: 83 GLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILM 133
G+N PAK+ VF D ++S Q +GRAGRRG D G I +
Sbjct: 1305 GVNAPAKSSVFLG----DSPYLNVLTSK---QCAGRAGRRGFDNYGNVIFV 1348
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 287 VKGVYEDDANKKPEDSNY-TVNILTR--CVVSKDGAGKKTLKIVPLKESGEPLVVSVPIS 343
+KG D+ +D +Y ++IL+ CV + ++ I+ L PL +V
Sbjct: 1570 LKGGVFDNLPTNQKDCDYFIIHILSYLFCVQNIPSIYVRSPSILILP----PLPPTV--H 1623
Query: 344 QIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGL 383
+IIK + RL + L + LKST++FL +++ L
Sbjct: 1624 KIIKNHNDRL-LKTFSTYLYVYKKYLKSTNDFLPFSSNDL 1662
>UNIPROTKB|F1P0I1 [details] [associations]
symbol:F1P0I1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:QDCTYAD GeneTree:ENSGT00690000102154 EMBL:AADN02016399
IPI:IPI00595626 Ensembl:ENSGALT00000015699 Uniprot:F1P0I1
Length = 1313
Score = 129 (50.5 bits), Expect = 0.00026, P = 0.00026
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 42 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKF-D 100
L +RGIG HH + ++ +E+LF+ G IK + AT T ++G+NMP ++VVF F D
Sbjct: 1245 LARRGIGYHHGAMAMKERQTVEMLFRLGYIKVVTATSTLALGINMPCRSVVFAEDSVFLD 1304
Query: 101 GDKFRWI 107
+R +
Sbjct: 1305 ALNYRQV 1311
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 650 650 0.00095 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 130
No. of states in DFA: 614 (65 KB)
Total size of DFA: 313 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.86u 0.12s 67.98t Elapsed: 00:00:03
Total cpu time: 67.89u 0.12s 68.01t Elapsed: 00:00:03
Start: Tue May 21 13:41:05 2013 End: Tue May 21 13:41:08 2013
WARNINGS ISSUED: 1