BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006320
(650 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 239/509 (46%), Gaps = 83/509 (16%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
NN+ S N R + + + +V YRILC GGVIGKSG +I +IR +T A I
Sbjct: 13 NNSESNRNQKRRISHDKINRDELVV--YRILCPIDVVGGVIGKSGKVINAIRHNTKAKIK 70
Query: 114 VHELIPGDEERIIEI--SDTRRRDPEGRMPS----FSPAQEALFLIHDRILESDGGGGFY 167
V + + G +R+I I S +++ G S AQ+AL ++D I+ SD
Sbjct: 71 VFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASD------ 124
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
EE V + R++V L+GK G+ I+++R T+ +++
Sbjct: 125 ----EENNTKTNVDRDDNK------ECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 228 LPRDHSLPR--CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------------ 273
+ +D S P C + +V + G+ +VK A+ +S+ + + R+
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPA 234
Query: 274 ------SHFHGRLHSPDRFFPDDDYVPHMNNTARRPS----MDGARFSGSNYRSNNYGPR 323
S ++ F+ + D++ + A PS + + F G Y P
Sbjct: 235 ASVIVPSDLSNSVYPQTGFYSNQDHI--LQQGAGVPSYFNALSVSDFQG--YAETAANPV 290
Query: 324 PSGYSIEAGAAPMSDSVQPFYG----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P + A + P++ F G E+LVF++LCP+ + RVIG+ ++ ++ G
Sbjct: 291 P----VFASSLPVT---HGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGS 343
Query: 380 DLKVADPVD--GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
++V D G DE +I +++ E PDD A EA+L +Q I D A+ + +LL
Sbjct: 344 CIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN---VKMQLL 400
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARD 494
V S IGC+ G+ GS ++E+R+ T ANI C+S D+LV++ GE+ + RD
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRD 450
Query: 495 ALVEVTTRLRSYLY--RDFFQKETPPSST 521
AL+++ RLR + +D PP+ T
Sbjct: 451 ALIQIVLRLREDVLGDKDSVATRKPPART 479
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE----- 400
E +V+R+LCPID VG VIG+S ++ +++ +KV D + G +++ITI
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 93
Query: 401 ------EGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCL 446
+ ++ L AQ+ALL + IV D+D+ RLLVP S+ L
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 153
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ G ++ +RR T A+++++S++ C D +V I GE ++ + AL V+
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVS-- 211
Query: 503 LRSYLYRDFFQKETPPSSTG---PTGSALV 529
+ +Y+ ++ P ST P S +V
Sbjct: 212 --AIMYKINPRENIPLDSTSQDVPAASVIV 239
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 55/310 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDPE 137
+++LC VIGK GS IK IR+ +G+ I V++ GD+E +I ++ T D
Sbjct: 313 VFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM 372
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
M A EA+ L+ + I + D V +++
Sbjct: 373 KSM-----AVEAVLLLQEYINDEDA---------------------------ENVKMQLL 400
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS--MSEEIVQVVGDINNVK 255
VS +GC++GK G +I ++R T I C+S +++V+V G++++V+
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNANI-----------CISKGKKDDLVEVSGEVSSVR 449
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR-PSMDGARFSGSN 314
+A+ I RLRE D+ R P + ++ +N PS + S S
Sbjct: 450 DALIQIVLRLREDVLGDKDSVATR--KPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSG 507
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ + YG P+G ++ P S P +L P + +V+G+ G +E ++
Sbjct: 508 F--HGYGSFPAGDNVLGSTGPYSYGRLP---SSSALEILIPAHAMSKVMGKGGGNLENIR 562
Query: 375 NEIGVDLKVA 384
G ++++
Sbjct: 563 RISGAMIEIS 572
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 178/429 (41%), Gaps = 79/429 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + +E V +++
Sbjct: 253 -----CSAACKMILE-IMQKEAKDTKTADE---------------------VPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N A F S SN
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLNLAAV------GLFPAS---SNA 382
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P PS S GAAP S + P E + P VG +IG+ ++ L
Sbjct: 383 VPPPPSSVS---GAAPYSSFMPP---EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASA 436
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 437 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 493
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA----- 492
P+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 494 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYASQMAQR 550
Query: 493 --RDALVEV 499
RD L +V
Sbjct: 551 KIRDILAQV 559
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 32/154 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T + G +IGK G IK + + A I+I+ D + R
Sbjct: 406 TVHVFIPAQAVGAIIGKKGQHIKQLSRFASAS--------------IKIAPPETPDSKVR 451
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M + EA F RI F+G +EE ++ T + V
Sbjct: 452 MVVITGPPEAQFKAQGRIYGKLKEENFFGPKEE-----------------VKLETHIRVP 494
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G ++GKGGK + +++ T ++ ++PRD +
Sbjct: 495 ASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQT 527
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 196/466 (42%), Gaps = 93/466 (19%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
P L R+L G +IGK G+ I++I + T + I++H + G E+ I + T
Sbjct: 189 PKLQSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHST 248
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
PEG S + + ++ +++ EE
Sbjct: 249 ----PEG---CSSACRNIMEIMQKEAIDTK-----ITEE--------------------- 275
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGD 250
+ +++ VG L+GK G+ ++++ +T T+I I P +D +L E + V G
Sbjct: 276 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGT 331
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
++ A I ++RES D + H L S + +P +N A +
Sbjct: 332 LDACAKAEEEIMKKVRESYENDVAAMH--LQS--------NLIPGLNLNAL--GLFPGAA 379
Query: 311 SGSNYRSNNYGPRP---SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
SG S GP P +GY GA S++V F P VG +IG+
Sbjct: 380 SGGISPSVVSGPPPGAQAGYQ-SFGAQMESETVHLF----------IPALAVGAIIGKQG 428
Query: 368 GIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLG 425
++ L G +K+A P DG D ++++ IS GP + F AQ + G
Sbjct: 429 QHIKQLSRFAGASIKIA-PADGIDAKQRMVIIS---GPPEAQFKAQGRIFGKLKEENFFG 484
Query: 426 ADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
++ + + VPS G + G+ G +++E++ T A + ++ R++ P DE Q
Sbjct: 485 PKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP------DENDQ 537
Query: 485 IVGEI-------QAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
+V +I Q A+ + E+ +++R Q++ PS+ GP
Sbjct: 538 VVVKITGHFYASQLAQRKIQEIISQVRR-------QQQPKPSAAGP 576
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 194
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 95/371 (25%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF 287
S R V++S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAY 227
Query: 288 --------PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGY 327
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
D+ P +L P D +G +IG + ++ G +K+A+
Sbjct: 288 ----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 333
Query: 388 DGSDEQIITIS 398
+GS E+ ITI+
Sbjct: 334 EGSSERQITIT 344
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 402 GPDDELFPAQEALLHIQTRIVDL-----GADKDNIITT-RLLVPSSEIGCLEGRDGS-LS 454
G + FP ++ LH +L G D +T L +P+ IGC+ GR G+ ++
Sbjct: 258 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 317
Query: 455 EMRRSTGANIQILSREE 471
E+R+ +GA I+I + E
Sbjct: 318 EIRQMSGAQIKIANATE 334
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
G +IG+ G+ I IRQ +GA I + G ER I I+ T
Sbjct: 306 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 147/367 (40%), Gaps = 81/367 (22%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRES-------QHRDRSHFHGRLHS--PDRFFPDDDYV--PHMN- 297
I VK ++ L +S +R + + + DR+ D PH
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 214
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRP---------------------SGYSIEAGAAPM 336
+ P ++G + P+P +G+S G
Sbjct: 215 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS---GIESS 271
Query: 337 SDSVQPFYGEDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
S V+ ++G D + + P D +G +IG + ++ G +K+A+PV+GS
Sbjct: 272 SPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 331
Query: 392 EQIITIS 398
++ +TI+
Sbjct: 332 DRQVTIT 338
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT++ + + G +IG+ G+ I IRQ +GA I + + G +R + I+
Sbjct: 287 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT-------- 338
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGG 165
G S S AQ +LI+ R+ GG G
Sbjct: 339 GSAASISLAQ---YLINVRLSSETGGMG 363
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 183 GGFRGGGNRVAT-RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
G GG N T R+++ VG ++GK G+ +++MR E+ +I I + + P
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCP------ 55
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRE 267
E I+ + G N + A A+I +L E
Sbjct: 56 ERIITLAGPTNAIFKAFAMIIDKLEE 81
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 436 LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
L +P+ IGC+ GR G+ ++E+R+ +GA I+I + E TD V I G +
Sbjct: 292 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSTDRQVTITGSAASISL 346
Query: 495 ALVEVTTRLRS 505
A + RL S
Sbjct: 347 AQYLINVRLSS 357
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 194
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 135/359 (37%), Gaps = 91/359 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 179
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 239
Query: 298 NTAR-----------------RPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDS 339
+ P+ G + S+ + N + SG D+
Sbjct: 240 QLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL----------DA 289
Query: 340 VQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 290 SPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 402 GPDDELFPAQEALLHIQTRIVDL-----GADKDNIITT-RLLVPSSEIGCLEGRDGS-LS 454
G + FP ++ LH +L G D +T L +P+ IGC+ GR G+ ++
Sbjct: 258 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 317
Query: 455 EMRRSTGANIQILSREE 471
E+R+ +GA I+I + E
Sbjct: 318 EIRQMSGAQIKIANATE 334
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 187 GGGNRVAT-RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIV 245
GG N T R+++ VG ++GK G+ +++MR E+ +I I + + P E IV
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI--SEGNCP------ERIV 91
Query: 246 QVVGDINNVKNAVAIISSRLRE 267
+ G + + A A+I+ + E
Sbjct: 92 TITGPTDAIFKAFAMIAYKFEE 113
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
G +IG+ G+ I IRQ +GA I + G ER I I+ T
Sbjct: 306 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT----- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P + F +A +I D+ LE D V
Sbjct: 63 GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFYG 345
P +D G + S N + S +++ AG S V+ ++
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 346 E-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
A +Q+ + + +P + T+ + I G Q+ + + ++ + L +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQS 173
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT+ + + G +IG+ G+ I IRQ +GA I + + G R + I+ G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT--------G 331
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG 164
S S AQ +LI+ R+ G G
Sbjct: 332 SAASISLAQ---YLINARLSSEKGMG 354
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D T L +P++ IGC+ GR G+ ++E+R+ +GA I+I
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT----- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P + F +A +I D+ LE D V
Sbjct: 63 GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFYG 345
P +D G + S N + S +++ AG S V+ ++
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 346 E-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
A +Q+ + + +P + T+ + I G Q+ + + ++ + L +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQS 173
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT+ + + G +IG+ G+ I IRQ +GA I + + G R + I+ G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT--------G 331
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG 164
S S AQ +LI+ R+ G G
Sbjct: 332 SAASISLAQ---YLINARLSSEKGMG 354
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D T L +P++ IGC+ GR G+ ++E+R+ +GA I+I
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT----- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P + F +A +I D+ LE D V
Sbjct: 63 GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFYG 345
P +D G + S N + S +++ AG S V+ ++
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 346 E-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
A +Q+ + + +P + T+ + I G Q+ + + ++ + L +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQS 173
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT+ + + G +IG+ G+ I IRQ +GA I + + G R + I+ G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT--------G 331
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG 164
S S AQ +LI+ R+ G G
Sbjct: 332 SAASISLAQ---YLINARLSSEKGMG 354
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D T L +P++ IGC+ GR G+ ++E+R+ +GA I+I
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT----- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P + F +A +I D+ LE D V
Sbjct: 63 GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFYG 345
P +D G + S N + S +++ AG S V+ ++
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 346 E-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
A +Q+ + + +P + T+ + I G Q+ + + ++ + L +
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQS 173
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT+ + + G +IG+ G+ I IRQ +GA I + + G R + I+ G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT--------G 331
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG 164
S S AQ +LI+ R+ G G
Sbjct: 332 SAASISLAQ---YLINARLSSEKGMG 354
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D T L +P++ IGC+ GR G+ ++E+R+ +GA I+I
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 72/361 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG----------- 345
P ++G + P+P +++ PM+ F G
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 274
Query: 346 --------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI
Sbjct: 275 WAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 334
Query: 398 S 398
+
Sbjct: 335 T 335
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT++ + + G +IG+ G+ I IRQ +GA I + + G +R + I+
Sbjct: 284 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT-------- 335
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGG 165
G S S AQ +LI+ R+ GG G
Sbjct: 336 GSAASISLAQ---YLINVRLSSETGGMG 360
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 183 GGFRGGGNRVAT-RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
G GG N T R+++ VG ++GK G+ +++MR E+ +I I + + P
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCP------ 55
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRE 267
E I+ + G N + A A+I +L E
Sbjct: 56 ERIITLAGPTNAIFKAFAMIIDKLEE 81
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 436 LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
L +P+ IGC+ GR G+ ++E+R+ +GA I+I + E TD V I G +
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSTDRQVTITGSAASISL 343
Query: 495 ALVEVTTRLRS 505
A + RL S
Sbjct: 344 AQYLINVRLSS 354
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 176/436 (40%), Gaps = 86/436 (19%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
P R+L G +IGK G+ I++I + T + I++H + G E+ I I T
Sbjct: 200 PKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST 259
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
PEG A +I + I++ + + EE
Sbjct: 260 ----PEG-------CSAACKIIME-IMQKEAQDTKFTEE--------------------- 286
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGD 250
+ +++ VG L+GK G+ ++++ +T T+I I P +D +L E + V G
Sbjct: 287 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGS 342
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA-------RRP 303
I A I ++RES D + + + H +P +N A
Sbjct: 343 IEPCAKAEEEIMKKIRESYENDIAAMNLQAH----------LIPGLNLNALGLFPSSSSG 392
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+ S S +Y P G P S++V F P VG +I
Sbjct: 393 MPPPSVGVPSPTSSTSYPP--------FGQQPESETVHLF----------IPALAVGAII 434
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRI 421
G+ ++ L G +K+A P +G D ++ + I+ GP + F AQ +
Sbjct: 435 GKQGQHIKQLSRFAGASIKIA-PAEGPDAKLRMVIIT---GPPEAQFKAQGRIYGKLKEE 490
Query: 422 VDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTD 480
G ++ + T + VPS G + G+ G +++E++ T A + ++ R++ P D
Sbjct: 491 NFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP---DEND 546
Query: 481 E-LVQIVGEIQAARDA 495
E +V+I G A++ A
Sbjct: 547 EVVVKITGHFYASQLA 562
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 172/423 (40%), Gaps = 78/423 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I++H + G E+ I I T PEG
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST----PEG-- 261
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + + EE + +++
Sbjct: 262 -----CSAACKIIME-IMQKEAQDTKFTEE---------------------IPLKILAHN 294
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I P +D +L E + V G I A
Sbjct: 295 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEE 350
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
+ ++RES D + + + H +P +N A + +
Sbjct: 351 EVMKKIRESYENDIAAMNLQAH----------LIPGLNLNALG-LFPPSSSGMPPPSAGV 399
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S G P S++V F P VG +IG+ ++ L G
Sbjct: 400 SSPTTSASYPPFGQQPESETVHLF----------IPALAVGAIIGKQGQHIKQLSRFAGA 449
Query: 380 DLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D ++ + I+ GP + F AQ + G ++ + +
Sbjct: 450 SIKIA-PAEGPDAKLRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 505
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA 492
VPS G + G+ G +++E++ T A + ++ R++ P DE +V+I G A+
Sbjct: 506 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP------DENDQVVVKITGHFYAS 558
Query: 493 RDA 495
+ A
Sbjct: 559 QLA 561
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T + + G +IGK G IK + + GA I+I+ D + R
Sbjct: 419 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGAS--------------IKIAPAEGPDAKLR 464
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M + EA F RI F+G +EE ++ + V
Sbjct: 465 MVIITGPPEAQFKAQGRIYGKLKEENFFGPKEE-----------------VKLEAHIKVP 507
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G ++GKGGK + +++ T ++ ++PRD +
Sbjct: 508 SYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQT 540
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 88/452 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 199 RLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST----PEGT- 253
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A +++ I+ + + EE + +++
Sbjct: 254 ---SAACKSIL----EIMHKEAQDIKFTEE---------------------IPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G++ A
Sbjct: 286 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQE---LTLYNPERTITVKGNVETCAKAEEE 342
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR--RPSMDGARFSGSNYRSN 318
I ++RES D + + + H +P +N A P G
Sbjct: 343 IMKKIRESYENDIASMNLQAH----------LIPGLNLNALGLFPPTSGM---------- 382
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
P P+ A P Q E + P VG +IG+ ++ L G
Sbjct: 383 ---PPPTSGPPSAMTPPYPQFEQ---SETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 436
Query: 379 VDLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-ITTR 435
+K+A P + D ++ + I+ GP + F AQ ++ + + + + K+ + +
Sbjct: 437 ASIKIA-PAEAPDAKVRMVIIT---GPPEAQFKAQ-GRIYGKIKEENFVSPKEEVKLEAH 491
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI----- 489
+ VPS G + G+ G +++E++ + A + ++ R++ P DE Q+V +I
Sbjct: 492 IRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP------DENDQVVVKITGHFY 544
Query: 490 --QAARDALVEVTTRLRSYLYRDFFQKETPPS 519
Q A+ + E+ T+++ + + Q P S
Sbjct: 545 ACQVAQRKIQEILTQVKQHQQQKALQSGPPQS 576
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 32/156 (20%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T + + G +IGK G IK + + GA I+I+ D +
Sbjct: 405 TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGAS--------------IKIAPAEAPDAK 450
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
RM + EA F RI F +EE ++ +
Sbjct: 451 VRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEE-----------------VKLEAHIR 493
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
V G ++GKGGK + +++ + ++ ++PRD +
Sbjct: 494 VPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQT 528
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
DL R+L P VG +IG+ + + Q + +D+ + +++ I +S+ EG
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTS 254
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E ++H + + + + I ++L ++ +G L G++G +L ++ + T
Sbjct: 255 AACKSILE-IMHKEAQDIKFTEE----IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTK 309
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
I I +E+ + + + + G ++ A E+ ++R D
Sbjct: 310 ITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDI 355
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 175/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYGSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 167/413 (40%), Gaps = 74/413 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I++H + G E+ I I T PEG
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST----PEG-- 253
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + + EE + +++
Sbjct: 254 -----CSTACKIIME-IMQKEAQDTKFTEE---------------------IPLKILAHN 286
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I P +D +L E + V G I A
Sbjct: 287 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEE 342
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RES D + + + H +P +N A + +
Sbjct: 343 EIMKKIRESYENDIAAMNLQAH----------LIPGLNLNALG-LFPPSSSGIPPPAVSV 391
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+ G P S++V F P VG +IG+ ++ L G
Sbjct: 392 ASAAAAASYPPFGQQPESETVHLF----------IPALAVGAIIGKQGQHIKQLSRFAGA 441
Query: 380 DLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D ++ + I+ GP + F AQ + G ++ + +
Sbjct: 442 SIKIA-PAEGPDAKLRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 497
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
VPS G + G+ G +++E++ T A + ++ R++ P DE Q+V +I
Sbjct: 498 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP------DENDQVVVKI 543
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T + + G +IGK G IK + + GA I+I+ D + R
Sbjct: 411 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGAS--------------IKIAPAEGPDAKLR 456
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M + EA F RI F+G +EE ++ + V
Sbjct: 457 MVIITGPPEAQFKAQGRIYGKLKEENFFGPKEE-----------------VKLEAHIKVP 499
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G ++GKGGK + +++ T ++ ++PRD +
Sbjct: 500 SYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQT 532
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 250 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 283
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 337
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 338 IITDLLRSVQ 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,617,186
Number of Sequences: 539616
Number of extensions: 12393167
Number of successful extensions: 177254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 71525
Number of HSP's gapped (non-prelim): 47936
length of query: 650
length of database: 191,569,459
effective HSP length: 124
effective length of query: 526
effective length of database: 124,657,075
effective search space: 65569621450
effective search space used: 65569621450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 65 (29.6 bits)