Query 006321
Match_columns 650
No_of_seqs 262 out of 1428
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 21:34:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006321.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006321hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0546 HSP90 co-chaperone CPR 100.0 1.8E-57 4E-62 474.0 15.9 176 3-178 5-181 (372)
2 KOG0880 Peptidyl-prolyl cis-tr 100.0 1.4E-48 3E-53 378.0 17.0 166 6-179 39-206 (217)
3 KOG0879 U-snRNP-associated cyc 100.0 2.2E-48 4.8E-53 356.2 13.0 169 4-175 8-177 (177)
4 PTZ00221 cyclophilin; Provisio 100.0 1.9E-44 4E-49 367.8 21.0 177 2-182 48-226 (249)
5 PTZ00060 cyclophilin; Provisio 100.0 1.4E-43 3.1E-48 348.2 20.5 169 5-175 14-182 (183)
6 cd01926 cyclophilin_ABH_like c 100.0 1.5E-43 3.3E-48 342.1 19.5 164 7-173 1-164 (164)
7 PLN03149 peptidyl-prolyl isome 100.0 3E-43 6.4E-48 346.8 18.7 170 3-175 15-186 (186)
8 KOG0111 Cyclophilin-type pepti 100.0 3.3E-43 7.3E-48 344.7 10.3 165 4-176 134-298 (298)
9 KOG0881 Cyclophilin type pepti 100.0 1.6E-41 3.5E-46 307.9 8.9 153 5-174 8-162 (164)
10 cd01923 cyclophilin_RING cyclo 100.0 8E-40 1.7E-44 314.9 18.4 155 8-179 1-157 (159)
11 COG0652 PpiB Peptidyl-prolyl c 100.0 6.1E-40 1.3E-44 314.0 16.1 147 9-174 2-156 (158)
12 cd01928 Cyclophilin_PPIL3_like 100.0 6E-39 1.3E-43 307.0 17.8 149 8-173 2-152 (153)
13 cd01921 cyclophilin_RRM cyclop 100.0 8.7E-39 1.9E-43 309.6 17.7 154 11-181 2-165 (166)
14 cd01927 cyclophilin_WD40 cyclo 100.0 1.1E-38 2.3E-43 303.7 17.0 145 11-172 2-148 (148)
15 cd01922 cyclophilin_SpCYP2_lik 100.0 1.7E-38 3.6E-43 301.8 16.9 144 11-171 2-146 (146)
16 KOG0883 Cyclophilin type, U bo 100.0 6.2E-39 1.3E-43 334.7 12.3 163 4-183 275-439 (518)
17 cd01925 cyclophilin_CeCYP16-li 100.0 2.2E-37 4.7E-42 301.4 19.0 160 5-181 4-166 (171)
18 KOG0885 Peptidyl-prolyl cis-tr 100.0 4.5E-38 9.8E-43 327.5 13.0 162 4-182 10-174 (439)
19 PRK10903 peptidyl-prolyl cis-t 100.0 1.9E-36 4.2E-41 299.3 18.5 153 4-175 26-189 (190)
20 KOG0884 Similar to cyclophilin 100.0 5.6E-37 1.2E-41 277.0 11.6 155 8-179 2-159 (161)
21 KOG0865 Cyclophilin type pepti 100.0 2.5E-37 5.4E-42 298.2 9.7 163 5-175 2-167 (167)
22 PRK10791 peptidyl-prolyl cis-t 100.0 5.9E-36 1.3E-40 289.6 17.9 147 9-174 2-162 (164)
23 KOG0882 Cyclophilin-related pe 100.0 1E-36 2.3E-41 323.5 12.0 150 8-174 406-557 (558)
24 cd01920 cyclophilin_EcCYP_like 100.0 3.3E-35 7.2E-40 281.7 16.3 142 11-171 2-154 (155)
25 PF00160 Pro_isomerase: Cyclop 100.0 9E-35 2E-39 276.4 17.5 151 10-174 1-155 (155)
26 cd00317 cyclophilin cyclophili 100.0 4.3E-34 9.3E-39 269.5 16.9 144 10-171 1-146 (146)
27 KOG0415 Predicted peptidyl pro 100.0 3.4E-34 7.4E-39 296.5 13.5 158 8-182 2-169 (479)
28 cd01924 cyclophilin_TLP40_like 100.0 5.1E-33 1.1E-37 272.0 14.8 126 19-155 5-164 (176)
29 KOG0882 Cyclophilin-related pe 97.9 7E-06 1.5E-10 89.6 3.9 146 17-174 108-261 (558)
30 PF12903 DUF3830: Protein of u 96.9 0.0026 5.7E-08 61.1 7.5 113 12-155 2-130 (147)
31 TIGR03268 methan_mark_3 putati 96.8 0.0066 1.4E-07 68.0 10.4 114 22-156 376-496 (503)
32 TIGR03268 methan_mark_3 putati 96.5 0.01 2.3E-07 66.4 9.6 107 17-155 197-303 (503)
33 PRK00969 hypothetical protein; 96.5 0.014 3.1E-07 65.5 10.4 113 22-156 379-498 (508)
34 PRK00969 hypothetical protein; 96.5 0.011 2.4E-07 66.4 9.4 107 17-155 200-306 (508)
35 COG4070 Predicted peptidyl-pro 96.4 0.0091 2E-07 64.9 7.9 107 17-155 199-305 (512)
36 COG4070 Predicted peptidyl-pro 95.8 0.023 5.1E-07 61.9 7.5 115 22-156 377-499 (512)
37 KOG2985 Uncharacterized conser 94.0 0.069 1.5E-06 55.2 4.8 18 216-233 179-196 (306)
38 PF04126 Cyclophil_like: Cyclo 93.5 0.25 5.4E-06 46.0 7.2 103 11-155 3-113 (120)
39 KOG3116 Predicted C3H1-type Zn 92.9 0.26 5.6E-06 47.4 6.3 13 301-313 141-153 (177)
40 KOG3794 CBF1-interacting corep 69.9 1.5 3.2E-05 48.3 0.0 17 30-46 94-110 (453)
41 PHA03001 putative virion core 69.1 13 0.00029 35.2 6.1 50 8-70 5-60 (132)
42 KOG2812 Uncharacterized conser 68.0 2.3 4.9E-05 46.4 0.9 20 205-224 192-211 (426)
43 KOG2140 Uncharacterized conser 62.0 4.8 0.0001 46.2 2.1 11 117-127 619-629 (739)
44 COG2164 Uncharacterized conser 60.3 13 0.00027 34.2 4.0 32 124-155 80-117 (126)
45 PF06138 Chordopox_E11: Chordo 54.3 44 0.00096 31.8 6.7 48 8-70 5-61 (130)
46 KOG0526 Nucleosome-binding fac 50.7 1.9E+02 0.0041 33.8 12.1 15 2-16 248-262 (615)
47 PF02505 MCR_D: Methyl-coenzym 44.4 2.2E+02 0.0048 28.0 9.9 21 23-43 1-23 (153)
48 KOG3953 SOCS box protein SSB-1 40.2 84 0.0018 32.9 6.8 37 9-45 71-108 (242)
49 KOG2236 Uncharacterized conser 39.9 15 0.00033 41.5 1.5 31 118-150 234-264 (483)
50 KOG2548 SWAP mRNA splicing reg 37.9 25 0.00055 40.4 2.8 6 38-43 39-44 (653)
51 KOG3869 Uncharacterized conser 36.2 11 0.00024 42.1 -0.2 9 30-38 11-19 (450)
52 COG2927 HolC DNA polymerase II 31.6 1.3E+02 0.0029 29.2 6.3 98 22-146 3-111 (144)
53 KOG4676 Splicing factor, argin 31.6 40 0.00087 37.6 3.1 20 16-38 3-22 (479)
54 TIGR03260 met_CoM_red_D methyl 31.3 4.8E+02 0.01 25.7 9.9 19 25-43 2-22 (150)
55 KOG2740 Clathrin-associated pr 30.4 16 0.00034 40.3 -0.2 149 22-178 66-243 (418)
56 PF05913 DUF871: Bacterial pro 28.9 29 0.00063 38.4 1.5 51 104-155 298-349 (357)
57 COG0026 PurK Phosphoribosylami 22.2 1.2E+02 0.0026 33.9 4.6 52 121-172 248-309 (375)
58 KOG3064 RNA-binding nuclear pr 22.1 45 0.00099 35.3 1.3 9 121-129 116-124 (303)
59 KOG4146 Ubiquitin-like protein 22.0 4E+02 0.0087 24.3 7.0 43 1-45 1-47 (101)
60 COG0219 CspR Predicted rRNA me 21.8 91 0.002 30.7 3.2 34 22-69 2-35 (155)
61 KOG1832 HIV-1 Vpr-binding prot 21.4 1.5E+02 0.0033 36.7 5.4 34 116-149 1274-1321(1516)
No 1
>KOG0546 consensus HSP90 co-chaperone CPR7/Cyclophilin [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-57 Score=474.04 Aligned_cols=176 Identities=67% Similarity=1.107 Sum_probs=170.6
Q ss_pred CCCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCC
Q 006321 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (650)
Q Consensus 3 ~~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~ 82 (650)
...||+|||||+|||+++|+||||||.++||+||+||+.||+|++|.+..++++|+|+|+.|||||++||||||||+.++
T Consensus 5 ~~~~pr~ffDISI~ge~~GRIvfeLf~dv~PKTaENFraLCtGE~G~~~~~gk~L~YKG~~FHRViK~FMiQgGDfs~gn 84 (372)
T KOG0546|consen 5 VRTNPRVFFDISIGGEPAGRIVFELFNDVVPKTAENFRALCTGEKGGGLTTGKPLHYKGSRFHRVIKNFMIQGGDFSEGN 84 (372)
T ss_pred cCCCceEEEEEEeCCcccceEEEEeecccCchhHHHHHHHhccccCCCCCCCCeeeecCchhheeeecceeeccccccCC
Confidence 34699999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCC-C
Q 006321 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-G 161 (650)
Q Consensus 83 gsgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~-g 161 (650)
|+||++|||.+|+||||.|+|+.++||+|||.|+|+||||||||+.+.|||||+|+|||+||.|++||..|+++.|++ .
T Consensus 85 GtGGeSIYG~~FdDEnF~lKHdrpflLSMAN~GpNTNgSQFFITT~p~PHLdGkHVVFGqVI~G~~VVr~IEn~~~d~~s 164 (372)
T KOG0546|consen 85 GTGGESIYGEKFDDENFELKHDRPFLLSMANRGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGKEVVREIENLETDEES 164 (372)
T ss_pred CCCcccccccccccccceeccCcchhhhhhcCCCCCCCcceEEeCCCCCCcCCceeEEeeEeechhHHHHHhccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985 4
Q ss_pred CcccCceeceeeecccc
Q 006321 162 KPAQPVKIIDCGEFSES 178 (650)
Q Consensus 162 kP~~~I~I~~cgel~~~ 178 (650)
+|+.+|.|.+||+|+..
T Consensus 165 kP~~dV~I~dCGel~~~ 181 (372)
T KOG0546|consen 165 KPLADVVISDCGELVKK 181 (372)
T ss_pred CCccceEeccccccccc
Confidence 89999999999998764
No 2
>KOG0880 consensus Peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-48 Score=377.95 Aligned_cols=166 Identities=62% Similarity=1.057 Sum_probs=158.8
Q ss_pred CCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhc-CCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCC
Q 006321 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCT-GEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (650)
Q Consensus 6 np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~-g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gs 84 (650)
.-+|||||.+|++++|+|+|+||++++|+||+||.+||+ +.++.+ |.|+.|||||+||||||||++.++++
T Consensus 39 T~kV~fdi~~g~~~~grIvigLfG~~vPKTV~NF~~l~~~~~~~~g--------Y~gS~FhRVi~nfmIQGGd~t~g~gt 110 (217)
T KOG0880|consen 39 THKVYFDIEIGGEPVGRIVIGLFGKVVPKTVENFRALATSGEKGYG--------YKGSKFHRVIPNFMIQGGDFTKGDGT 110 (217)
T ss_pred eeEEEEEEEECCEeccEEEEEeccccchHHHHHHHHHHccCCCCcc--------cCCceeeeeecCceeecCccccCCCC
Confidence 347999999999999999999999999999999999999 666554 99999999999999999999999999
Q ss_pred CCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCc
Q 006321 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKP 163 (650)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP 163 (650)
|+.+|||.+|+|||+.|+|+.+|.|+|||.|+|+||+|||||+...+||||+|+|||+|++|||||.+|+.+.|+ .++|
T Consensus 111 Gg~SIyG~~F~DENf~LkH~rpG~lSMAn~GpDtNGsQFfItT~~t~wLDGkhVVFGqVl~Gmdvv~~Ie~~~TD~~dkP 190 (217)
T KOG0880|consen 111 GGKSIYGEKFPDENFKLKHDRPGRLSMANAGPDTNGSQFFITTVKTPWLDGKHVVFGQVLEGMDVVRKIENVKTDERDKP 190 (217)
T ss_pred CCeEeecCCCCCccceeecCCCceEeeeccCCCCCCceEEEEecCCccccCceeEEeeehhhHHHHHHHHhcccCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 5799
Q ss_pred ccCceeceeeeccccc
Q 006321 164 AQPVKIIDCGEFSESK 179 (650)
Q Consensus 164 ~~~I~I~~cgel~~~~ 179 (650)
+++++|.+||+|....
T Consensus 191 ~e~v~I~~~g~l~~~~ 206 (217)
T KOG0880|consen 191 LEDVVIANCGELPVEY 206 (217)
T ss_pred cccEEEeecCcccccc
Confidence 9999999999987754
No 3
>KOG0879 consensus U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-48 Score=356.22 Aligned_cols=169 Identities=63% Similarity=1.100 Sum_probs=162.2
Q ss_pred CCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC
Q 006321 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (650)
Q Consensus 4 ~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g 83 (650)
..||+|||||+|||.++|+|.||||++++|+|++||.++|+|+.- ..+++.-|++|.|||||++||||||||.+++|
T Consensus 8 ~~nPvVF~dv~igg~~~GrikieLFadivPkTAENFRQFCTGE~r---~~g~PiGYK~~tFHRvIkdFMiQgGDFv~gDG 84 (177)
T KOG0879|consen 8 PNNPVVFFDVAIGGRPIGRIKIELFADIVPKTAENFRQFCTGEYR---KDGVPIGYKNSTFHRVIKDFMIQGGDFVNGDG 84 (177)
T ss_pred CCCCeEEEEEeeCCEEcceEEEEEeeccChhhHHHHHhhcccccc---cCCccccccccchHHHhhhheeccCceecCCC
Confidence 469999999999999999999999999999999999999999842 44678889999999999999999999999999
Q ss_pred CCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCC
Q 006321 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGK 162 (650)
Q Consensus 84 sgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gk 162 (650)
+|..+||+.+|.|||+.|+|+.+|+|+|||+|+++||+|||||.....+||++|+|||+|++||.|+.+|+++++. +++
T Consensus 85 tG~~sIy~~~F~DENFtlkH~~PGlLSMANsG~~tNGCQFFITcakcdfLD~KHVVFGrvldGlli~rkIEnvp~G~Nnk 164 (177)
T KOG0879|consen 85 TGVASIYGSTFPDENFTLKHDGPGLLSMANSGKDTNGCQFFITCAKCDFLDGKHVVFGRVLDGLLIMRKIENVPTGPNNK 164 (177)
T ss_pred ceEEEEcCCCCCCcceeeecCCCceeeccccCCCCCCceEEEEecccccccCceEEEeeeehhhhhhhhhhcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997 789
Q ss_pred cccCceeceeeec
Q 006321 163 PAQPVKIIDCGEF 175 (650)
Q Consensus 163 P~~~I~I~~cgel 175 (650)
|.-+|.|+.||++
T Consensus 165 PKl~v~i~qCGem 177 (177)
T KOG0879|consen 165 PKLPVVIVQCGEM 177 (177)
T ss_pred CCCcEEEeecccC
Confidence 9999999999974
No 4
>PTZ00221 cyclophilin; Provisional
Probab=100.00 E-value=1.9e-44 Score=367.77 Aligned_cols=177 Identities=38% Similarity=0.568 Sum_probs=161.9
Q ss_pred CCCCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecC-ceEEeCCCCC
Q 006321 2 SEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKG-FMIQGGDFSK 80 (650)
Q Consensus 2 ~~~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipg-fvIQgGd~~~ 80 (650)
....+|+|||||+|||.++|+|+||||.+.||+||+||+.||+|+.+.+..++..++|+|+.||||+++ ||||+||+..
T Consensus 48 ~~~~~~rVfldisig~~~~GrIvIELf~d~aP~T~eNF~~Lc~g~~g~~~~~g~k~~Y~gt~FhRVi~~~f~iqgGD~~~ 127 (249)
T PTZ00221 48 EEQNSCRAFLDISIGDVLAGRLVFELFEDVVPETVENFRALITGSCGIDTNTGVKLDYLYTPVHHVDRNNNIIVLGELDS 127 (249)
T ss_pred cCCCCCEEEEEEeeCCeecceEEEEEeCCCCcHHHHHHHHHhhcccccccccCcccccCCCEEEEEeCCCCEEEeCCCCC
Confidence 456799999999999999999999999999999999999999998876665666778999999999985 8999999753
Q ss_pred CCCCCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-
Q 006321 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG- 159 (650)
Q Consensus 81 ~~gsgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~- 159 (650)
.+..+||..|.+|++.+.|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++
T Consensus 128 ----~g~s~~G~~f~dE~~~~~h~~~G~LsMan~GpntngSQFfITl~~~p~LDgk~vVFGrVveGmdVv~kIe~v~~d~ 203 (249)
T PTZ00221 128 ----FNVSSTGTPIADEGYRHRHTERGLLTMISEGPHTSGSVFGITLGPSPSLDFKQVVFGKAVDDLSLLEKLESLPLDD 203 (249)
T ss_pred ----CCccCCCCcccCccccccCCCCCEEEeCcCCCCCccceEEEECCCCCccCCCceEEEEEEeCHHHHHHHHcCCcCC
Confidence 345778899999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCcccCceeceeeecccccccc
Q 006321 160 DGKPAQPVKIIDCGEFSESKIQD 182 (650)
Q Consensus 160 ~gkP~~~I~I~~cgel~~~~~~~ 182 (650)
+++|+.+|+|.+||+|..+....
T Consensus 204 ~grP~~~V~I~~Cgvl~~~~p~~ 226 (249)
T PTZ00221 204 VGRPLLPVTVSFCGALTGEKPPG 226 (249)
T ss_pred CCCCCCCeEEEECeEecCCCCCc
Confidence 68999999999999999876443
No 5
>PTZ00060 cyclophilin; Provisional
Probab=100.00 E-value=1.4e-43 Score=348.22 Aligned_cols=169 Identities=64% Similarity=1.086 Sum_probs=158.2
Q ss_pred CCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCC
Q 006321 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (650)
Q Consensus 5 ~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gs 84 (650)
++|+|||||+++|.++|+|+||||.+.||+||+||+.||+|..... .++.+||+||.||||+++|||||||+..+++.
T Consensus 14 ~~~~v~~di~i~~~~~G~ivIeL~~d~aP~t~~nF~~L~~g~~~~~--~g~~~~Y~~~~fhRvi~~~~iqgGd~~~~~g~ 91 (183)
T PTZ00060 14 KRPKVFFDISIDNAPAGRIVFELFSDVTPKTAENFRALCIGDKVGS--SGKNLHYKGSIFHRIIPQFMCQGGDITNHNGT 91 (183)
T ss_pred CCCEEEEEEEECCEeCceEEEEEcCCCCcHHHHHHHHHhcCCcccc--cCcccccCCeEEEEEcCCCeEEeCCccCCCCC
Confidence 6899999999999999999999999999999999999998764321 34678999999999999999999998877888
Q ss_pred CCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCCCcc
Q 006321 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPA 164 (650)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~gkP~ 164 (650)
++.++|+..+++|++.+.|+.+|+|+|++.+++++++||||||.++++||++|||||+||+|||||++|+.+++.++.|+
T Consensus 92 ~g~~~~g~~~~~e~~~~~h~~~G~lsma~~g~~~~~sqFfIt~~~~~~Ldg~~tvFG~Vi~G~dvl~~I~~~~~~~~~P~ 171 (183)
T PTZ00060 92 GGESIYGRKFTDENFKLKHDQPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVIEGMEVVRAMEKEGTQSGYPK 171 (183)
T ss_pred CCCcccccccCCccccccCCCCCEEEeccCCCCCCcceEEEEeCCCcccCCCccEEEEEEccHHHHHHHHccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred cCceeceeeec
Q 006321 165 QPVKIIDCGEF 175 (650)
Q Consensus 165 ~~I~I~~cgel 175 (650)
.+|+|++||+|
T Consensus 172 ~~v~I~~cg~~ 182 (183)
T PTZ00060 172 KPVVVTDCGEL 182 (183)
T ss_pred CCeEEEEeEEc
Confidence 99999999987
No 6
>cd01926 cyclophilin_ABH_like cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. These enzymes have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. As cyclophilins, Human hCyP-A, human cyclophilin-B (hCyP-19), S. cerevisiae Cpr1 and C. elegans Cyp-3, are inhibited by the immunosuppressive drug cyclopsporin A (CsA). CsA binds to the PPIase active site. Cyp-3. S. cerevisiae Cpr1 interacts with the Rpd3 - Sin3 complex and in addition is a component of the Set3 complex. S. cerevisiae Cpr1 has also been shown to have a role in Zpr1p nuclear transport. Human cyclophilin H associates with the [U4/U6.U5] tri-snRNP particles of the spl
Probab=100.00 E-value=1.5e-43 Score=342.13 Aligned_cols=164 Identities=71% Similarity=1.233 Sum_probs=153.4
Q ss_pred CeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCC
Q 006321 7 PLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGG 86 (650)
Q Consensus 7 p~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg 86 (650)
|+||||++++|.++|+|+||||.++||+||+||+.||.+..+.+. +..||++|.||||+++|||||||+..+++.++
T Consensus 1 p~v~~di~i~~~~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~~---~~~~Y~~~~f~Rv~~~~~iq~Gd~~~~~g~~~ 77 (164)
T cd01926 1 PKVFFDITIGGEPAGRIVMELFADVVPKTAENFRALCTGEKGKGG---KPFGYKGSTFHRVIPDFMIQGGDFTRGNGTGG 77 (164)
T ss_pred CEEEEEEeECCeeceeEEEEEeCCCCCHHHHHHHHHhcccCCCcc---cccccCCCEEEEEeCCcEEEcCCccCCCCCCC
Confidence 789999999999999999999999999999999999987544321 44589999999999999999999887788888
Q ss_pred CcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCCCcccC
Q 006321 87 ESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQP 166 (650)
Q Consensus 87 ~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~gkP~~~ 166 (650)
.++|+..|++|++.+.|+.+|+|+||+.+++++++||||||+++++||++|+|||+|++|||||++|+.+++++++|+.+
T Consensus 78 ~~~~g~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfIt~~~~~~Ld~~~tvFG~V~~G~dvl~~i~~~~~~~~~P~~~ 157 (164)
T cd01926 78 KSIYGEKFPDENFKLKHTGPGLLSMANAGPNTNGSQFFITTVKTPWLDGKHVVFGKVVEGMDVVKKIENVGSGNGKPKKK 157 (164)
T ss_pred CcccCCccCCCCccccCCCccEEEeeECCCCCcccEEEEEeCCCCccCCcccEEEEEEEcHHHHHHHHcCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceeceee
Q 006321 167 VKIIDCG 173 (650)
Q Consensus 167 I~I~~cg 173 (650)
|+|++||
T Consensus 158 i~I~~cG 164 (164)
T cd01926 158 VVIADCG 164 (164)
T ss_pred eEEEECC
Confidence 9999997
No 7
>PLN03149 peptidyl-prolyl isomerase H (cyclophilin H); Provisional
Probab=100.00 E-value=3e-43 Score=346.79 Aligned_cols=170 Identities=61% Similarity=1.030 Sum_probs=155.7
Q ss_pred CCCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCC
Q 006321 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (650)
Q Consensus 3 ~~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~ 82 (650)
+.+||+|||||++++.++|+|+||||.+.||+||+||+.||+++... .+....|++|.||||+++|||||||+..++
T Consensus 15 ~~~~~~v~~di~~~~~~~G~i~ieL~~~~aP~t~~NF~~Lc~g~~~~---~g~~~~Y~~~~fhrVi~~f~iqgGd~~~~~ 91 (186)
T PLN03149 15 NPKNPVVFFDVTIGGIPAGRIKMELFADIAPKTAENFRQFCTGEFRK---AGLPQGYKGCQFHRVIKDFMIQGGDFLKGD 91 (186)
T ss_pred CCCCCEEEEEEeeCCcccccEEEEEcCCCCcHHHHHHHHHHhhhccc---cCcccccCCcEEEEEcCCcEEEcCCcccCC
Confidence 34689999999999999999999999999999999999999876321 112234999999999999999999988888
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEE-cCHHHHHHHHhcCCC-C
Q 006321 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVV-KGLNIVKKIEQVGTG-D 160 (650)
Q Consensus 83 gsgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVI-eGmDVLdkIe~v~t~-~ 160 (650)
+.++.++|+..|++|++.+.|+.+|+|+|++.+++++++||||||.++++||++|+|||+|+ +|||||++|+.++++ +
T Consensus 92 g~g~~~~~g~~f~~e~~~~~h~~~G~lsma~~g~~s~~sqFfIt~~~~p~Ldg~~tVFG~Vi~eG~dvl~~I~~~~~~~~ 171 (186)
T PLN03149 92 GTGCVSIYGSKFEDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPN 171 (186)
T ss_pred CCCcccccCCccCCcccccccCCCCEEEEeeCCCCCcccEEEEECCCCCccCCCceEEEEEEECcHHHHHHHHcCCCCCC
Confidence 89999999999999998999999999999999999999999999999999999999999999 799999999999995 7
Q ss_pred CCcccCceeceeeec
Q 006321 161 GKPAQPVKIIDCGEF 175 (650)
Q Consensus 161 gkP~~~I~I~~cgel 175 (650)
++|+.+|+|.+||++
T Consensus 172 ~~P~~~i~I~~cG~~ 186 (186)
T PLN03149 172 NRPKLACVISECGEM 186 (186)
T ss_pred CCCcCCeEEEeCEeC
Confidence 899999999999985
No 8
>KOG0111 consensus Cyclophilin-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-43 Score=344.71 Aligned_cols=165 Identities=64% Similarity=1.071 Sum_probs=161.2
Q ss_pred CCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC
Q 006321 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (650)
Q Consensus 4 ~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g 83 (650)
..||.|||++.||+...|+|+++|-.++.|+|++||..||+++.|.| |+||.||||||.||+|||||++++|
T Consensus 134 ~~~pqv~~~ikig~~~~Gri~~~lrtdv~Pmtaenfr~Lctge~gfg--------ykgssfhriip~fmcqggdftn~ng 205 (298)
T KOG0111|consen 134 MENPQVYHDIKIGEDRAGRIVMLLRTDVVPMTAENFRCLCTGEAGFG--------YKGSSFHRIIPKFMCQGGDFTNGNG 205 (298)
T ss_pred hhChHhhhheeecccccceEEEeecccCChhhhhhhhhhccccCccC--------ccccchhhhhhhhhccCCccccCCC
Confidence 46999999999999999999999999999999999999999998877 9999999999999999999999999
Q ss_pred CCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCCCc
Q 006321 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKP 163 (650)
Q Consensus 84 sgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~gkP 163 (650)
+|+.+|||.+|.||||.|+|..+|+|+|||.|+|+||+|||||+....|||++|+|||.||+||+||.+|+..++..|+|
T Consensus 206 tggksiygkkfddenf~lkht~pgtlsmansgantngsqffict~ktdwldgkhvvfghv~eg~~vvrq~e~qgsksgkp 285 (298)
T KOG0111|consen 206 TGGKSIYGKKFDDENFTLKHTMPGTLSMANSGANTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNVVRQVEQQGSKSGKP 285 (298)
T ss_pred CCCcccccccccccceeeecCCCceeeccccCCCCCCceEEEEecccccccCceeEEeeecchHHHHHHHHhccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeceeeecc
Q 006321 164 AQPVKIIDCGEFS 176 (650)
Q Consensus 164 ~~~I~I~~cgel~ 176 (650)
.+.|+|..||+|.
T Consensus 286 ~qkv~i~~cge~~ 298 (298)
T KOG0111|consen 286 QQKVKIVECGEIE 298 (298)
T ss_pred ceEEEEEeccccC
Confidence 9999999999873
No 9
>KOG0881 consensus Cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-41 Score=307.94 Aligned_cols=153 Identities=51% Similarity=0.866 Sum_probs=143.6
Q ss_pred CCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCC
Q 006321 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (650)
Q Consensus 5 ~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gs 84 (650)
.-|.|+|+|++| .|+||||-+.||+||.||.+|+ +.+||+|+.|||||++|||||||+ +++|.
T Consensus 8 q~~~V~LeTsmG-----~i~~ElY~kHaP~TC~NF~eLa-----------rrgYYn~v~FHRii~DFmiQGGDP-TGTGR 70 (164)
T KOG0881|consen 8 QPPNVTLETSMG-----KITLELYWKHAPRTCQNFAELA-----------RRGYYNGVIFHRIIKDFMIQGGDP-TGTGR 70 (164)
T ss_pred CCCeEEEeeccc-----ceehhhhhhcCcHHHHHHHHHH-----------hcccccceeeeehhhhheeecCCC-CCCCC
Confidence 468999999988 9999999999999999999999 456999999999999999999997 58899
Q ss_pred CCCcccCCcccCC-CCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCC
Q 006321 85 GGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGK 162 (650)
Q Consensus 85 gg~si~g~~~~dE-~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gk 162 (650)
|+.+|||.+|+|| +..|+|...|+|+|||+|||+||+||||||++.+||||+||+||+|+.||+||..|.-+.++ .++
T Consensus 71 GGaSIYG~kF~DEi~~dLkhTGAGILsMANaGPnTNgSQFFiTLAPt~~LDGKHTIFGRV~~Gm~vikr~G~v~Td~~DR 150 (164)
T KOG0881|consen 71 GGASIYGDKFEDEIHSDLKHTGAGILSMANAGPNTNGSQFFITLAPTQWLDGKHTIFGRVCSGMEVIKRMGMVETDNSDR 150 (164)
T ss_pred CccccccchhhhhhhhhhcccchhhhhhhccCCCCCCceEEEEecCccccCCcceeehhhhhhHHHHHhhcceecCCCCC
Confidence 9999999999999 45799999999999999999999999999999999999999999999999999999999998 479
Q ss_pred cccCceeceeee
Q 006321 163 PAQPVKIIDCGE 174 (650)
Q Consensus 163 P~~~I~I~~cge 174 (650)
|+.+|+|+.+..
T Consensus 151 Pi~~~kIika~~ 162 (164)
T KOG0881|consen 151 PIDEVKIIKAYP 162 (164)
T ss_pred CccceeeEeeec
Confidence 999999988743
No 10
>cd01923 cyclophilin_RING cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human cyclophilin A exhibit reduced peptidylprolyl cis- trans isomerase activity and lack a residue important for cyclophilin binding. Human hCyP-60 has been shown to physically interact with the proteinase inhibitor peptide eglin c and; C. elegans MOG-6 to physically interact with MEP-1, a nuclear zinc finger protein. MOG-6 has been shown to function in germline sex determination.
Probab=100.00 E-value=8e-40 Score=314.88 Aligned_cols=155 Identities=51% Similarity=0.836 Sum_probs=143.6
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~ 87 (650)
+|.|+|+.| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+. +++.++.
T Consensus 1 ~v~~~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~-----------g~Y~~~~f~rv~~~~~iq~Gd~~-~~g~~~~ 63 (159)
T cd01923 1 YVRLHTNKG-----DLNLELHCDKAPKACENFIKLCKK-----------GYYDGTIFHRSIRNFMIQGGDPT-GTGRGGE 63 (159)
T ss_pred CEEEEEccc-----cEEEEEeCCCChHHHHHHHHHHhc-----------CccCCcEEEEEeCCcEEEecccC-CCCCCCc
Confidence 478888877 999999999999999999999964 48999999999999999999974 6678889
Q ss_pred cccCCcccCCC-CCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCccc
Q 006321 88 SIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQ 165 (650)
Q Consensus 88 si~g~~~~dE~-~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP~~ 165 (650)
++|+..|.+|. ..+.|+.+|+|+||+.+++++++||||||+++++||++|+|||+|++|||||++|+.++++ +++|+.
T Consensus 64 ~~~g~~~~~E~~~~~~h~~~G~v~ma~~~~~s~~sqFfIt~~~~~~Ld~~~~vFG~V~~G~~vl~~I~~~~~~~~~~P~~ 143 (159)
T cd01923 64 SIWGKPFKDEFKPNLSHDGRGVLSMANSGPNTNGSQFFITYRSCKHLDGKHTVFGRVVGGLETLEAMENVPDPGTDRPKE 143 (159)
T ss_pred cccCCccCcccccCcCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCCC
Confidence 99999999884 4688999999999999999999999999999999999999999999999999999999885 689999
Q ss_pred Cceeceeeeccccc
Q 006321 166 PVKIIDCGEFSESK 179 (650)
Q Consensus 166 ~I~I~~cgel~~~~ 179 (650)
+|+|.+|+++.++|
T Consensus 144 ~i~I~~~~i~~dpf 157 (159)
T cd01923 144 EIKIEDTSVFVDPF 157 (159)
T ss_pred CeEEEEeEEEeCCC
Confidence 99999999999887
No 11
>COG0652 PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-40 Score=314.02 Aligned_cols=147 Identities=51% Similarity=0.829 Sum_probs=130.6
Q ss_pred EEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCc
Q 006321 9 VFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGES 88 (650)
Q Consensus 9 V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~s 88 (650)
|.|+|+.| +|+||||+++||+||+||++||. .+||+|+.|||||++|||||||+..+++.+++.
T Consensus 2 v~~~t~~G-----~I~ieL~~~~aP~Tv~NF~~l~~-----------~g~Ydg~~FHRVi~~FmiQgGd~~~~~g~gg~~ 65 (158)
T COG0652 2 VILETNKG-----DITIELYPDKAPKTVANFLQLVK-----------EGFYDGTIFHRVIPGFMIQGGDPTGGDGTGGPG 65 (158)
T ss_pred ceeeccCC-----CEEEEECCCcCcHHHHHHHHHHH-----------cCCCCCceEEEeecCceeecCCCCCCCCCCCCC
Confidence 55666666 99999999999999999999995 459999999999999999999998887888774
Q ss_pred ccCCcccCCCCCCCCCC--CceEeeccCC-CCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCC-----
Q 006321 89 IYGGKFTDENFKLDHNG--PGILSMANSG-ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD----- 160 (650)
Q Consensus 89 i~g~~~~dE~~~l~h~~--~G~Lsma~~g-~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~----- 160 (650)
..|++|++.+.|+. +|+|+||+++ ||+++||||||+.+++|||++|+|||+|++|||||++|+++.+..
T Consensus 66 ---~~f~~E~~~~~~~~~~~G~lsMA~~g~P~t~~SQFFI~~~~~~~Ld~~ytVFG~Vv~GmdvvdkI~~~~~~~~~~~~ 142 (158)
T COG0652 66 ---PPFKDENFALNGDRHKRGTLSMARAGDPNSNGSQFFITVVDNPFLDGKYTVFGQVVEGMDVVDKIKNGDTDDSGYVQ 142 (158)
T ss_pred ---CCCcccccccccccCCcceEeEcccCCcCCccCeEEEEecCCcccCCCCcEEEEEehhHHHHHHHHcCCccCCCccc
Confidence 78999998888877 9999999999 999999999999999999999999999999999999999987763
Q ss_pred CCcccCceeceeee
Q 006321 161 GKPAQPVKIIDCGE 174 (650)
Q Consensus 161 gkP~~~I~I~~cge 174 (650)
..|..+|+|..+.+
T Consensus 143 ~~~~~~~~i~~~~~ 156 (158)
T COG0652 143 DVPADPVKILSVKI 156 (158)
T ss_pred CCCCCCeEEeeeee
Confidence 34556777776554
No 12
>cd01928 Cyclophilin_PPIL3_like Cyclophilin_PPIL3_like. Proteins similar to Human cyclophilin-like peptidylprolyl cis- trans isomerase (PPIL3). Members of this family lack a key residue important for cyclosporin binding: the tryptophan residue corresponding to W121 in human hCyP-18a; most members have a histidine at this position. The exact function of the protein is not known.
Probab=100.00 E-value=6e-39 Score=307.05 Aligned_cols=149 Identities=50% Similarity=0.856 Sum_probs=137.6
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~ 87 (650)
.|.|+|+.| +|+||||+++||+||+||++||+++ ||+||.||||+++|||||||+. +++.++.
T Consensus 2 ~v~l~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~g-----------~Y~~~~f~rv~~~f~iq~Gd~~-~~g~g~~ 64 (153)
T cd01928 2 SVTLHTNLG-----DIKIELFCDDCPKACENFLALCASG-----------YYNGCIFHRNIKGFMVQTGDPT-GTGKGGE 64 (153)
T ss_pred EEEEEEccc-----cEEEEEcCCCCcHHHHHHHHHHhcC-----------ccCCcEEEEeCCCCEEEccccC-CCCCCCC
Confidence 478888776 9999999999999999999999754 9999999999999999999974 5677888
Q ss_pred cccCCcccCCCC-CCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCccc
Q 006321 88 SIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQ 165 (650)
Q Consensus 88 si~g~~~~dE~~-~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP~~ 165 (650)
.+|+..|++|.. .+.|+.+|+|+||+.+++++++||||||+++++||++|+|||+|++|||||++|+.++++ +++|+.
T Consensus 65 ~~~~~~~~~e~~~~~~~~~~G~v~ma~~~~~~~~SqFfI~~~~~~~Ld~~~tvFG~V~~G~dvl~~I~~~~~~~~~~P~~ 144 (153)
T cd01928 65 SIWGKKFEDEFRETLKHDSRGVVSMANNGPNTNGSQFFITYAKQPHLDGKYTVFGKVIDGFETLDTLEKLPVDKKYRPLE 144 (153)
T ss_pred ccCCCccccccccCCCcCCCcEEEEeeCCCCCcccEEEEEeCCCcccCCCceEEEEEEeCHHHHHHHHcCCCCCCCCCcC
Confidence 899999999975 578889999999999999999999999999999999999999999999999999999986 689999
Q ss_pred Cceeceee
Q 006321 166 PVKIIDCG 173 (650)
Q Consensus 166 ~I~I~~cg 173 (650)
+|+|.+|.
T Consensus 145 ~i~I~~~~ 152 (153)
T cd01928 145 EIRIKDVT 152 (153)
T ss_pred CeEEEEeE
Confidence 99999984
No 13
>cd01921 cyclophilin_RRM cyclophilin_RRM: cyclophilin-type peptidylprolyl cis- trans isomerase domain occuring with a C-terminal RNA recognition motif domain (RRM). This subfamily of the cyclophilin domain family contains a number of eukaryotic cyclophilins having the RRM domain including the nuclear proteins: human hCyP-57, Arabidopsis thaliana AtCYP59, Caenorhabditis elegans CeCyP-44 and Paramecium tetrurelia Kin241. The Kin241 protein has been shown to have a role in cell morphogenesis.
Probab=100.00 E-value=8.7e-39 Score=309.62 Aligned_cols=154 Identities=39% Similarity=0.662 Sum_probs=137.0
Q ss_pred EEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCccc
Q 006321 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (650)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~ 90 (650)
|+|++| +|+||||.++||+||+||++||+++ ||+|+.||||+++|||||||+. +++.++.++|
T Consensus 2 l~Ts~G-----~i~ieL~~~~aP~t~~nF~~L~~~~-----------~Y~g~~fhrvi~~f~iQgGd~~-~~g~~~~~~~ 64 (166)
T cd01921 2 LETTLG-----DLVIDLFTDECPLACLNFLKLCKLK-----------YYNFCLFYNVQKDFIAQTGDPT-GTGAGGESIY 64 (166)
T ss_pred cEeccC-----CEEEEEcCCCCCHHHHHHHHHHhcC-----------CcCCCEEEEEeCCceEEECCcC-CCCCCCcccc
Confidence 567666 9999999999999999999999754 8999999999999999999985 5566777666
Q ss_pred C-------CcccCCC-CCCCCCCCceEeeccCCCCCCCcceEEeecc-CCCCCCCceEEEEEEcCHHHHHHHHhcCCC-C
Q 006321 91 G-------GKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRR-QHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-D 160 (650)
Q Consensus 91 g-------~~~~dE~-~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~-~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~ 160 (650)
+ ..|.+|. ..++|+.+|+|+||+.+++++++||||||.+ +++||++|+|||+||+|||||++|+.++++ +
T Consensus 65 ~~~~~~~~~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~SQFfIt~~~~~~~Ldg~~tvFG~Vi~G~dvv~~I~~~~~~~~ 144 (166)
T cd01921 65 SQLYGRQARFFEPEILPLLKHSKKGTVSMVNAGDNLNGSQFYITLGENLDYLDGKHTVFGQVVEGFDVLEKINDAIVDDD 144 (166)
T ss_pred cccccccCcccCcccCCccccCCceEEEEeECCCCCccceEEEEcCCCCcccCCCccEEEEEEcCHHHHHHHHcCCCCCC
Confidence 4 2466665 4788999999999999999999999999975 799999999999999999999999999986 6
Q ss_pred CCcccCceeceeeeccccccc
Q 006321 161 GKPAQPVKIIDCGEFSESKIQ 181 (650)
Q Consensus 161 gkP~~~I~I~~cgel~~~~~~ 181 (650)
+.|+.+|+|..|++|.++|.+
T Consensus 145 ~~P~~~i~I~~~~i~~~pf~~ 165 (166)
T cd01921 145 GRPLKDIRIKHTHILDDPFPD 165 (166)
T ss_pred CCCCCCeEEEEEEEECCCCCC
Confidence 899999999999999998743
No 14
>cd01927 cyclophilin_WD40 cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.
Probab=100.00 E-value=1.1e-38 Score=303.68 Aligned_cols=145 Identities=52% Similarity=0.842 Sum_probs=133.5
Q ss_pred EEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCccc
Q 006321 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (650)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~ 90 (650)
|+|+.| +|+||||.++||+||+||++||+++ ||+||.||||+++|||||||+. +++.++.++|
T Consensus 2 i~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~g-----------~Y~~~~f~Rvi~~f~iq~Gd~~-~~g~g~~~~~ 64 (148)
T cd01927 2 IHTTKG-----DIHIRLFPEEAPKTVENFTTHARNG-----------YYNNTIFHRVIKGFMIQTGDPT-GDGTGGESIW 64 (148)
T ss_pred eEeccc-----cEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCcEEEEEcCCcEEEecccC-CCCCCCCccc
Confidence 566655 9999999999999999999999654 8999999999999999999974 6778888999
Q ss_pred CCcccCCCC-CCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCcccCce
Q 006321 91 GGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVK 168 (650)
Q Consensus 91 g~~~~dE~~-~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP~~~I~ 168 (650)
+..|++|.. .+.|+.+|+|+||+.++++++|||||||.++++||++|+|||+|++|||||++|+.++++ +++|+.+|+
T Consensus 65 ~~~~~~e~~~~~~h~~~G~l~ma~~~~~s~~SqFfIt~~~~p~Ldg~~tvFG~V~~G~dvl~~I~~~~~~~~~~P~~~i~ 144 (148)
T cd01927 65 GKEFEDEFSPSLKHDRPYTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQRIENVKTDKNDRPYEDIK 144 (148)
T ss_pred CCccccccccccCcCCCeEEEEeeCCCCCCCceEEEEcCCCcccCCCceEEEEEEcCHHHHHHHHcCCCCCCCCCcCCeE
Confidence 999999975 788998999999999999999999999999999999999999999999999999999986 689999999
Q ss_pred ecee
Q 006321 169 IIDC 172 (650)
Q Consensus 169 I~~c 172 (650)
|..+
T Consensus 145 I~~~ 148 (148)
T cd01927 145 IINI 148 (148)
T ss_pred EEeC
Confidence 9863
No 15
>cd01922 cyclophilin_SpCYP2_like cyclophilin_SpCYP2_like: cyclophilin 2-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to Schizosaccharomyces pombe cyp-2. These proteins bind their respective SNW chromatin binding protein in autologous systems, in a CsA independent manner indicating interaction with a surface outside the PPIase active site. SNW proteins play a basic and broad range role in signaling.
Probab=100.00 E-value=1.7e-38 Score=301.80 Aligned_cols=144 Identities=51% Similarity=0.892 Sum_probs=132.4
Q ss_pred EEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCccc
Q 006321 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (650)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~ 90 (650)
|+|+.| +|+||||.++||+||+||++||+.+ ||+|+.||||+++||||||++. +++.++.++|
T Consensus 2 i~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~g-----------~Y~~~~f~Rvi~~f~iq~Gd~~-~~g~~~~~~~ 64 (146)
T cd01922 2 LETTMG-----EITLELYWNHAPKTCKNFYELAKRG-----------YYNGTIFHRLIKDFMIQGGDPT-GTGRGGASIY 64 (146)
T ss_pred eEeccc-----cEEEEEcCCCCcHHHHHHHHHHhcC-----------CcCCcEEEEEcCCcEEEecccC-CCCCCccccc
Confidence 566655 9999999999999999999999653 9999999999999999999974 5677788899
Q ss_pred CCcccCCC-CCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCCCcccCcee
Q 006321 91 GGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKI 169 (650)
Q Consensus 91 g~~~~dE~-~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~gkP~~~I~I 169 (650)
+..|++|. ..++|+.+|+|+|++.+++++++||||||+++++||++|+|||+|++|||||++|+.+++++++|+.+|+|
T Consensus 65 ~~~~~~e~~~~~~h~~~G~l~ma~~~~~s~~sqFfIt~~~~p~Ld~~~tvFG~V~~G~dvl~~I~~~~~~~~~P~~~I~I 144 (146)
T cd01922 65 GKKFEDEIHPELKHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSKGMKVIENMVEVQTQTDRPIDEVKI 144 (146)
T ss_pred CCCcccccccCcCCCCCeEEEEeeCCCCCCccEEEEEcCCCcccCCCCCEEEEEEcCHHHHHHHHhCCCCCCCcCCCeEE
Confidence 99999984 57899999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred ce
Q 006321 170 ID 171 (650)
Q Consensus 170 ~~ 171 (650)
+.
T Consensus 145 ~~ 146 (146)
T cd01922 145 LK 146 (146)
T ss_pred eC
Confidence 63
No 16
>KOG0883 consensus Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-39 Score=334.72 Aligned_cols=163 Identities=48% Similarity=0.779 Sum_probs=151.7
Q ss_pred CCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC
Q 006321 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (650)
Q Consensus 4 ~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g 83 (650)
+++-+|-|.|..| .|.||||++.+|.+|+||++||. .+||+|+.|||.|.||||||||+ .+.|
T Consensus 275 Kkkgyvrl~Tn~G-----~lNlELhcd~~P~aceNFI~lc~-----------~gYYnnt~FHRsIrnFmiQGGDP-TGTG 337 (518)
T KOG0883|consen 275 KKKGYVRLVTNHG-----PLNLELHCDYAPRACENFITLCK-----------NGYYNNTIFHRSIRNFMIQGGDP-TGTG 337 (518)
T ss_pred cccceEEEeccCC-----ceeeEeecCcchHHHHHHHHHHh-----------cccccchHHHHHHHHHeeeCCCC-CCCC
Confidence 4567788888766 99999999999999999999995 45999999999999999999998 5889
Q ss_pred CCCCcccCCcccCCC-CCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCC-C
Q 006321 84 TGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-G 161 (650)
Q Consensus 84 sgg~si~g~~~~dE~-~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~-g 161 (650)
.||++|||.+|.||. ..|.|+.+|+|+|||.|+|+||||||||+..+.|||++|||||+||.|++||.+|+++++++ +
T Consensus 338 ~GGeSiWgKpFkDEf~~~l~H~gRGvlSMANsGpnTNgSQFFItyrsckhLd~KHTIFGrvVGGldtL~amEnve~d~~D 417 (518)
T KOG0883|consen 338 RGGESIWGKPFKDEFCSNLSHDGRGVLSMANSGPNTNGSQFFITYRSCKHLDNKHTIFGRVVGGLDTLTAMENVETDEKD 417 (518)
T ss_pred CCCccccCCccccccCCCCCcCCcceEeeccCCCCCCCceEEEEecchhhccccceeeeeeeccHHHHHHHhcCCCCCCC
Confidence 999999999999994 67999999999999999999999999999999999999999999999999999999999985 6
Q ss_pred CcccCceeceeeecccccccch
Q 006321 162 KPAQPVKIIDCGEFSESKIQDG 183 (650)
Q Consensus 162 kP~~~I~I~~cgel~~~~~~~~ 183 (650)
.|+.+|+|..+.++++++....
T Consensus 418 rP~e~I~i~~~~VFVdPfeEa~ 439 (518)
T KOG0883|consen 418 RPKEEIKIEDAIVFVDPFEEAD 439 (518)
T ss_pred CcccceEEeeeEEeeCcHHHHH
Confidence 9999999999999999986653
No 17
>cd01925 cyclophilin_CeCYP16-like cyclophilin_CeCYP16-like: cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced peptidylprolyl cis- trans isomerase activity, is cyclosporin insensitive and shows an altered substrate preference favoring, hydrophobic, acidic or amide amino acids. Most members of this subfamily have a glutamate residue in the active site at the position equivalent to a tryptophan (W121 in Human cyclophilin A), which has been shown to be important for cyclophilin binding.
Probab=100.00 E-value=2.2e-37 Score=301.37 Aligned_cols=160 Identities=41% Similarity=0.712 Sum_probs=145.6
Q ss_pred CCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCC
Q 006321 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (650)
Q Consensus 5 ~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gs 84 (650)
..-.|.|+|++| +|+||||+++||+||+||+.||+.+ ||+||.||||+++||||||++. +++.
T Consensus 4 ~~~~v~i~Ts~G-----~i~ieL~~~~~P~t~~nF~~L~~~~-----------~Y~~~~f~Rvi~~f~iQgGd~~-~~g~ 66 (171)
T cd01925 4 TTGKVILKTTAG-----DIDIELWSKEAPKACRNFIQLCLEG-----------YYDNTIFHRVVPGFIIQGGDPT-GTGT 66 (171)
T ss_pred cccEEEEEEccc-----cEEEEEeCCCChHHHHHHHHHHhcC-----------CCCCCEEEEEcCCcEEEccccC-CCCc
Confidence 456799999877 9999999999999999999999653 8999999999999999999974 6678
Q ss_pred CCCcccCCcccCCCC-CCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEE-cCHHHHHHHHhcCCC-CC
Q 006321 85 GGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVV-KGLNIVKKIEQVGTG-DG 161 (650)
Q Consensus 85 gg~si~g~~~~dE~~-~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVI-eGmDVLdkIe~v~t~-~g 161 (650)
++.++|+..|.+|.. .+.|+.+|+|+||+.+++++++||||||+++++||++|+|||+|+ ++|++|++|+.++++ ++
T Consensus 67 g~~s~~g~~~~~E~~~~~~~~~~G~l~ma~~g~~s~~sqFfIt~~~~~~ldg~~tvFG~V~g~~~~~v~~i~~~~~~~~~ 146 (171)
T cd01925 67 GGESIYGEPFKDEFHSRLRFNRRGLVGMANAGDDSNGSQFFFTLDKADELNNKHTLFGKVTGDTIYNLLKLAEVETDKDE 146 (171)
T ss_pred cCcccCCCccCcccccCcCCCCCcEEEECcCCCCCcccEEEEEcCCCcccCCCceEEEEEEECcHHHHHHHhcCCcCCCC
Confidence 888999999999865 578999999999999999999999999999999999999999999 468899999999986 57
Q ss_pred CcccCceeceeeeccccccc
Q 006321 162 KPAQPVKIIDCGEFSESKIQ 181 (650)
Q Consensus 162 kP~~~I~I~~cgel~~~~~~ 181 (650)
+|+.+|+|.+|+++.+++.+
T Consensus 147 ~P~~~i~I~~~~i~~~pf~~ 166 (171)
T cd01925 147 RPVYPPKITSVEVLENPFDD 166 (171)
T ss_pred CcCCCeEEEEEEEEcCCchh
Confidence 99999999999999887643
No 18
>KOG0885 consensus Peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-38 Score=327.54 Aligned_cols=162 Identities=40% Similarity=0.666 Sum_probs=149.8
Q ss_pred CCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC
Q 006321 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (650)
Q Consensus 4 ~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g 83 (650)
....+|.|.|+.| .|.||||+.+||++|.||++||..+ ||+|+.||||+|||+|||||+ +++|
T Consensus 10 ~ttgkvil~TT~G-----~I~iELW~kE~P~acrnFiqKOGeg-----------yy~nt~fhrlvp~f~~Qggdp-~~~g 72 (439)
T KOG0885|consen 10 PTTGKVILKTTKG-----DIDIELWAKECPKACRNFIQLCLEG-----------YYDNTEFHRLVPGFLVQGGDP-TGTG 72 (439)
T ss_pred CccceEEEEeccC-----ceeeeehhhhhhHHHHHHHHHHHhc-----------cccCceeeeeccchhcccCCC-CCCC
Confidence 3567899999988 9999999999999999999999754 999999999999999999998 6889
Q ss_pred CCCCcccCCcccCC-CCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEE-cCHHHHHHHHhcCCC-C
Q 006321 84 TGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVV-KGLNIVKKIEQVGTG-D 160 (650)
Q Consensus 84 sgg~si~g~~~~dE-~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVI-eGmDVLdkIe~v~t~-~ 160 (650)
+||++|||.+|.+| +..|.++.+|+|+||+++.+.||+||||||++.++|+++|||||+|+ .-++.|-+|..+.++ +
T Consensus 73 tGgesiyg~~fadE~h~Rlrf~rrGlvgmana~~~~ngsqFfftl~~~~el~nk~tiFGKVtGdtIYn~lri~e~eida~ 152 (439)
T KOG0885|consen 73 TGGESIYGRPFADEFHPRLRFNRRGLVGMANAGNDDNGSQFFFTLGDTPELNNKHTIFGKVTGDTIYNMLRISEVEIDAD 152 (439)
T ss_pred CCccccccccchhhcCcceeeeccceeeecccCCCCCCceEEEEecCChHhcccCceeeeecchhhhhhhhhcccccccc
Confidence 99999999999999 55799999999999999999999999999999999999999999999 478889999999988 6
Q ss_pred CCcccCceeceeeecccccccc
Q 006321 161 GKPAQPVKIIDCGEFSESKIQD 182 (650)
Q Consensus 161 gkP~~~I~I~~cgel~~~~~~~ 182 (650)
.+|+.+.+|+.|.+|..+|.+.
T Consensus 153 ~Rp~~p~kI~s~EV~~npFdDI 174 (439)
T KOG0885|consen 153 DRPVDPPKIKSVEVLINPFDDI 174 (439)
T ss_pred cCCCCccceeeeEeecCchhhc
Confidence 7999999999998888876544
No 19
>PRK10903 peptidyl-prolyl cis-trans isomerase A (rotamase A); Provisional
Probab=100.00 E-value=1.9e-36 Score=299.33 Aligned_cols=153 Identities=36% Similarity=0.547 Sum_probs=133.0
Q ss_pred CCCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC
Q 006321 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (650)
Q Consensus 4 ~~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g 83 (650)
..++.|.|+|+.| +|+||||.++||+||+||++||.. +||+|+.||||+++||||||++....+
T Consensus 26 ~~~~~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Ydg~~FhRvi~~f~iQgG~~~~~~~ 89 (190)
T PRK10903 26 KGDPHVLLTTSAG-----NIELELNSQKAPVSVKNFVDYVNS-----------GFYNNTTFHRVIPGFMIQGGGFTEQMQ 89 (190)
T ss_pred CCCcEEEEEeccc-----cEEEEEeCCCCcHHHHHHHHHHhc-----------CCcCCcEEEEEeCCceEEeCCcCCCCC
Confidence 4688899999877 999999999999999999999954 499999999999999999999754322
Q ss_pred CCCCcccCCcccCCCCCCCCCCCceEeeccCC-CCCCCcceEEeeccCCCCCC-----CceEEEEEEcCHHHHHHHHhcC
Q 006321 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSG-ANTNGSQFFITFRRQHHLDG-----KHVVFGKVVKGLNIVKKIEQVG 157 (650)
Q Consensus 84 sgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g-~ns~gSqFFITL~~~p~LDg-----k~tVFGrVIeGmDVLdkIe~v~ 157 (650)
...++..|.+|.....|+.+|+|+||+.+ +++++|||||||.++++||+ +|+|||+|++|||||++|+.++
T Consensus 90 ---~~~~~~~~~~e~~~~l~~~~G~lama~~~~~~sn~SQFfIt~~~~~~ld~~~~dg~ytvFG~V~eG~dvl~~I~~~~ 166 (190)
T PRK10903 90 ---QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVP 166 (190)
T ss_pred ---CCCCCCcccCcccccCcCCCcEEEeCCCCCCCCcccEEEEECcCcccccCCccCCCccEEEEEecCHHHHHHHHcCC
Confidence 22345677888665667789999999865 89999999999999999984 8999999999999999999999
Q ss_pred CCC-----CCcccCceeceeeec
Q 006321 158 TGD-----GKPAQPVKIIDCGEF 175 (650)
Q Consensus 158 t~~-----gkP~~~I~I~~cgel 175 (650)
+++ +.|+.+|+|..|+++
T Consensus 167 ~~~~~~~~~~P~~~v~I~~~~v~ 189 (190)
T PRK10903 167 THDVGPYQNVPSKPVVILSAKVL 189 (190)
T ss_pred CCCCCCCCCcccCCeEEEEEEEe
Confidence 864 689999999999775
No 20
>KOG0884 consensus Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-37 Score=276.96 Aligned_cols=155 Identities=48% Similarity=0.769 Sum_probs=143.2
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~ 87 (650)
.|.|.|.+| +|.||||.+.+|+||+||+.||... ||++|.||+-+++||||+|++ +..|.||.
T Consensus 2 svtlht~~g-----dikiev~~e~tpktce~~l~~~~~~-----------~~n~~~~~~~~~~f~v~~~~~-~~tgrgg~ 64 (161)
T KOG0884|consen 2 SVTLHTDVG-----DIKIEVFCERTPKTCENFLALCASD-----------YYNGCIFHRNIKGFMVQTGDP-THTGRGGN 64 (161)
T ss_pred eEEEeeccC-----cEEEEEEecCChhHHHHHHHHhhhh-----------hccceeecCCCCCcEEEeCCC-CCCCCCCc
Confidence 477788777 9999999999999999999999654 999999999999999999997 56789999
Q ss_pred cccCCcccCCCC-CCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCC--CCcc
Q 006321 88 SIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD--GKPA 164 (650)
Q Consensus 88 si~g~~~~dE~~-~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~--gkP~ 164 (650)
+|+|.+|+||.. -|+|+.+|+|+|||.|||+|++|||||.+.++|||-+|+|||+||+|+|+|++|+.+++++ .+|+
T Consensus 65 siwg~~fede~~~~lkh~~rg~vsmanngp~tn~sqffity~kq~hldmkytvfgkvidg~etldele~l~v~~ktyrpl 144 (161)
T KOG0884|consen 65 SIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPL 144 (161)
T ss_pred cccCCcchHHHHHHHhhccceeEEcccCCCCCCCceEEEEecCCCccceeEeeeeeeccchhhHHHHhhcccCccccccc
Confidence 999999999964 5899999999999999999999999999999999999999999999999999999999984 5899
Q ss_pred cCceeceeeeccccc
Q 006321 165 QPVKIIDCGEFSESK 179 (650)
Q Consensus 165 ~~I~I~~cgel~~~~ 179 (650)
..+.|.++.+...++
T Consensus 145 ~~~~ik~itihanp~ 159 (161)
T KOG0884|consen 145 NDVHIKDITIHANPF 159 (161)
T ss_pred hheeeeeeEEecCcC
Confidence 999999998876654
No 21
>KOG0865 consensus Cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-37 Score=298.23 Aligned_cols=163 Identities=66% Similarity=1.153 Sum_probs=156.6
Q ss_pred CCCeEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEE---eecCceEEeCCCCCC
Q 006321 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHR---IIKGFMIQGGDFSKG 81 (650)
Q Consensus 5 ~np~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhR---VipgfvIQgGd~~~~ 81 (650)
.||.||||++++++++|+++|+||++..|+|++||.+||+|+++.+ |++..||+ ++++||+||||++..
T Consensus 2 ~~~~vf~d~~~~~~p~gr~~~~l~ad~~Pktaenf~al~tgekg~~--------yk~s~fhr~~~~~~~fm~qggDft~h 73 (167)
T KOG0865|consen 2 VNPTVFFDIAIDGEPLGRIVFELFADKIPKTAENFRALCTGEKGFG--------YKGSCFHRLIPIIPGFMCQGGDFTCH 73 (167)
T ss_pred CCCeeeeeeeecCccccccceecccccCcchHhhhhhcccCCCccc--------cccchhhhccccccceeeccCccccc
Confidence 4899999999999999999999999999999999999999988765 99999999 345799999999999
Q ss_pred CCCCCCcccCCcccCCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCC
Q 006321 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDG 161 (650)
Q Consensus 82 ~gsgg~si~g~~~~dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~g 161 (650)
+++++.+||++.|.|||+.|+|..+|+|+|||+|||++++||||+++...|||++|+|||+|++||+||++|+..+..++
T Consensus 74 ngtggkSiy~ekF~DenFilkhtgpGiLSmaNagpntngsqffictaktewLdgkhVVfGkv~eGm~iv~a~e~~gs~~g 153 (167)
T KOG0865|consen 74 NGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMDIVEAMERFGSRNG 153 (167)
T ss_pred CCccceEecccccCCcCcEEecCCCCeeehhhcCCCccccEEEEEccccccccCceeEcCceEcccchhhhhhccCCcCC
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CcccCceeceeeec
Q 006321 162 KPAQPVKIIDCGEF 175 (650)
Q Consensus 162 kP~~~I~I~~cgel 175 (650)
++...|.|.+||+|
T Consensus 154 k~~~~i~i~dcg~l 167 (167)
T KOG0865|consen 154 KTSKKITIADCGQL 167 (167)
T ss_pred cccccEEEecCCcC
Confidence 99999999999975
No 22
>PRK10791 peptidyl-prolyl cis-trans isomerase B (rotamase B); Provisional
Probab=100.00 E-value=5.9e-36 Score=289.58 Aligned_cols=147 Identities=35% Similarity=0.571 Sum_probs=125.1
Q ss_pred EEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCc
Q 006321 9 VFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGES 88 (650)
Q Consensus 9 V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~s 88 (650)
|.|+|+.| +|+|+||.++||+||+||+.||+.+ ||+|+.||||+++||||||++..+.+. .
T Consensus 2 v~~~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~g-----------~Yd~~~fhRvi~~f~iQgGd~~~~~~~---~ 62 (164)
T PRK10791 2 VTFHTNHG-----DIVIKTFDDKAPETVKNFLDYCREG-----------FYNNTIFHRVINGFMIQGGGFEPGMKQ---K 62 (164)
T ss_pred EEEEEccc-----cEEEEEeCCCCcHHHHHHHHHHhcC-----------CcCCcEEEEEecCcEEEeCCcCCCCCc---C
Confidence 67888766 9999999999999999999999654 999999999999999999997544322 2
Q ss_pred ccCCcccCCCCCCCCCCCceEeeccCC-CCCCCcceEEeeccCCCCC-------C-CceEEEEEEcCHHHHHHHHhcCCC
Q 006321 89 IYGGKFTDENFKLDHNGPGILSMANSG-ANTNGSQFFITFRRQHHLD-------G-KHVVFGKVVKGLNIVKKIEQVGTG 159 (650)
Q Consensus 89 i~g~~~~dE~~~l~h~~~G~Lsma~~g-~ns~gSqFFITL~~~p~LD-------g-k~tVFGrVIeGmDVLdkIe~v~t~ 159 (650)
.++..|.+|.....++.+|+|+||+.+ +++++|||||||.++++|| + +|+|||+|++|||||++|+.++++
T Consensus 63 ~~~~~~~~e~~~~~~~~~G~lsma~~~~p~s~~SQFfI~~~~~~~ld~~~~~~d~~~~tvFG~V~eG~dvl~~I~~~~~~ 142 (164)
T PRK10791 63 ATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATG 142 (164)
T ss_pred CCCCCcCCcccccccCCCcEEEECCCCCcCCccceEEEEecCchhhcccccccCCCCccEEEEEecCHHHHHHHHcCcCC
Confidence 235567777544445579999999875 8999999999999988776 3 799999999999999999999986
Q ss_pred C-----CCcccCceeceeee
Q 006321 160 D-----GKPAQPVKIIDCGE 174 (650)
Q Consensus 160 ~-----gkP~~~I~I~~cge 174 (650)
. +.|+.+|+|..|.+
T Consensus 143 ~~~~~~~~P~~~v~I~~~~i 162 (164)
T PRK10791 143 RSGMHQDVPKEDVIIESVTV 162 (164)
T ss_pred CCCccCCCcCCCeEEEEEEE
Confidence 4 68999999999965
No 23
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-36 Score=323.50 Aligned_cols=150 Identities=49% Similarity=0.760 Sum_probs=140.6
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~ 87 (650)
-+.|+|+.| +|.|.||+++||+||+||...|.+ |||+|.+|||||+|||||+||+ .++|+||+
T Consensus 406 ~aiihtt~g-----di~~kl~p~ecpktvenf~th~rn-----------gyy~~~~fhriik~fmiqtgdp-~g~gtgge 468 (558)
T KOG0882|consen 406 AAIIHTTQG-----DIHIKLYPEECPKTVENFTTHSRN-----------GYYDNHTFHRIIKGFMIQTGDP-LGDGTGGE 468 (558)
T ss_pred ceEEEeccc-----ceEEEecccccchhhhhhhccccC-----------ccccCcchHHhhhhheeecCCC-CCCCCCCc
Confidence 467777766 999999999999999999999954 4999999999999999999998 58899999
Q ss_pred cccCCcccCCC-CCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCccc
Q 006321 88 SIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQ 165 (650)
Q Consensus 88 si~g~~~~dE~-~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP~~ 165 (650)
+|+|..|+||. ..|.|+.+.+|+|||+|+|+||||||||+.+.||||++|||||+|+.|||||+.|+++.|+ .++|.+
T Consensus 469 siwg~dfedefh~~lrhdrpft~smanag~ntngsqffit~~~tpwld~khtvfgrv~~gm~vvqri~~v~t~k~drp~e 548 (558)
T KOG0882|consen 469 SIWGKDFEDEFHPNLRHDRPFTVSMANAGPNTNGSQFFITTVPTPWLDGKHTVFGRVTAGMDVVQRIEQVKTDKYDRPYE 548 (558)
T ss_pred ccccccchhhcCcccccCCCceEEecccCCCCCCceEEEEecCccccCCcceeEEEEecchhHHhHhhhcccCcCCCCCC
Confidence 99999999995 5799999999999999999999999999999999999999999999999999999999997 689999
Q ss_pred Cceeceeee
Q 006321 166 PVKIIDCGE 174 (650)
Q Consensus 166 ~I~I~~cge 174 (650)
+|.|+++.+
T Consensus 549 ~v~iinisv 557 (558)
T KOG0882|consen 549 DVKIINISV 557 (558)
T ss_pred ceeEEEEec
Confidence 999999854
No 24
>cd01920 cyclophilin_EcCYP_like cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for cyclosporin A. E. coli cyclophilin A has a similar peptidylprolyl cis- trans isomerase activity to the human cyclophilin A. Most members of this subfamily contain a phenylalanine residue at the position equivalent to Human cyclophilin W121, where a tyrptophan has been shown to be important for cyclophilin binding.
Probab=100.00 E-value=3.3e-35 Score=281.74 Aligned_cols=142 Identities=36% Similarity=0.532 Sum_probs=120.5
Q ss_pred EEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCccc
Q 006321 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (650)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~ 90 (650)
|+|++| +|+||||.++||+||+||+.||.. +||+|+.||||+++||||||++....+. ..+
T Consensus 2 l~T~~G-----~i~ieL~~~~aP~t~~nF~~L~~~-----------g~Yd~~~fhRvi~~f~iQ~Gd~~~~~~~---~~~ 62 (155)
T cd01920 2 FQTSLG-----DIVVELYDDKAPITVENFLAYVRK-----------GFYDNTIFHRVISGFVIQGGGFTPDLAQ---KET 62 (155)
T ss_pred cEecce-----eEEEEEeCCCCcHHHHHHHHHHhc-----------CCCCCCEEEEEeCCcEEEeCCCCCCCCc---ccc
Confidence 456555 999999999999999999999964 4999999999999999999997644322 234
Q ss_pred CCcccCCCCCCCCCCCceEeeccCC-CCCCCcceEEeeccCCCCCC-----CceEEEEEEcCHHHHHHHHhcCCCC----
Q 006321 91 GGKFTDENFKLDHNGPGILSMANSG-ANTNGSQFFITFRRQHHLDG-----KHVVFGKVVKGLNIVKKIEQVGTGD---- 160 (650)
Q Consensus 91 g~~~~dE~~~l~h~~~G~Lsma~~g-~ns~gSqFFITL~~~p~LDg-----k~tVFGrVIeGmDVLdkIe~v~t~~---- 160 (650)
+..|.+|.....|+.+|+|+||+.+ +++++|||||||+++++||+ +|+|||+|++|||||++|+.+++++
T Consensus 63 ~~~~~~e~~~~~~~~~G~v~ma~~~~~~s~~SqFfI~~~~~~~ld~~~~~~~ytvFG~V~eG~dvl~~I~~~~~~~~~~~ 142 (155)
T cd01920 63 LKPIKNEAGNGLSNTRGTIAMARTNAPDSATSQFFINLKDNASLDYQNEQWGYTVFGEVTEGMDVVDKIAGVETYSFGSY 142 (155)
T ss_pred CCcccCcccccccCCceEEEECCCCCCCCccceEEEECCCchhcCCcccCCCccEEEEEecCHHHHHHHHcCCccCCCCc
Confidence 5667777665667789999999865 89999999999999999995 7999999999999999999999975
Q ss_pred -CCcccCceece
Q 006321 161 -GKPAQPVKIID 171 (650)
Q Consensus 161 -gkP~~~I~I~~ 171 (650)
+.|+.+|+|..
T Consensus 143 ~~~p~~~v~i~~ 154 (155)
T cd01920 143 QDVPVQDVIIES 154 (155)
T ss_pred CCCcCCCeEEEE
Confidence 47777877764
No 25
>PF00160 Pro_isomerase: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; InterPro: IPR002130 Cyclophilin [] is the major high-affinity binding protein in vertebrates for the immunosuppressive drug cyclosporin A (CSA), but is also found in other organisms. It exhibits a peptidyl-prolyl cis-trans isomerase activity (5.2.1.8 from EC) (PPIase or rotamase). PPIase is an enzyme that accelerates protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides []. It is probable that CSA mediates some of its effects via an forming a tight complex with cyclophilin that inhibits the phosphatase activity of calcineurin [], []. Cyclophilin A is a cytosolic and highly abundant protein. The protein belongs to a family of isozymes, including cyclophilins B and C, and natural killer cell cyclophilin-related protein [, , ]. Major isoforms have been found throughout the cell, including the ER, and some are even secreted. The sequences of the different forms of cyclophilin-type PPIases are well conserved. Note: FKBP's, a family of proteins that bind the immunosuppressive drug FK506, are also PPIases, but their sequence is not at all related to that of cyclophilin (see IPR001179 from INTERPRO).; GO: 0003755 peptidyl-prolyl cis-trans isomerase activity, 0006457 protein folding; PDB: 1Z81_A 1IHG_A 1IIP_A 3PMP_B 3O7T_A 2B71_A 1QNG_A 1QNH_A 2HQJ_A 2RMC_G ....
Probab=100.00 E-value=9e-35 Score=276.45 Aligned_cols=151 Identities=50% Similarity=0.825 Sum_probs=130.6
Q ss_pred EEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC-c
Q 006321 10 FLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE-S 88 (650)
Q Consensus 10 ~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~-s 88 (650)
||+|++++ +|+|+||||+++||++|+||++||+.+ +|+|+.||+|+++++||||++......+.. .
T Consensus 1 ~~~i~t~~--~G~i~ieL~~~~aP~~~~nF~~l~~~~-----------~y~g~~f~ri~~~~~i~~G~~~~~~~~~~~~~ 67 (155)
T PF00160_consen 1 FVDIETSG--LGRIVIELFGDEAPKTVENFLRLCTSG-----------FYDGTKFHRIIPNFVIQGGDPTGNGGYGREDS 67 (155)
T ss_dssp EEEEEETT--EEEEEEEEETTTSHHHHHHHHHHHHTT-----------SSTTEBEEEEETTTEEEESSTTTSSSSTSEEB
T ss_pred CEEEEeCC--ccCEEEEEeCCCCcHHHHhhehhhccc-----------ccCCceeecccccceeeeeeccCCCCcccccc
Confidence 78888866 899999999999999999999999754 899999999999999999998655432211 2
Q ss_pred ccCCcccCCCC-CCCCCCCceEeeccCC--CCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCCCCccc
Q 006321 89 IYGGKFTDENF-KLDHNGPGILSMANSG--ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQ 165 (650)
Q Consensus 89 i~g~~~~dE~~-~l~h~~~G~Lsma~~g--~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~gkP~~ 165 (650)
..+..+++|.. .+.++.+|+|+|++.+ ++++++||||+|.++++||++|+|||+|++||+||++|+.+++++ +|.+
T Consensus 68 ~~~~~~~~E~~~~~~~~~~G~v~~~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~-~p~~ 146 (155)
T PF00160_consen 68 TGGEPIPDEFNPSLLKHRRGLVSMARSGKDPNSNGSQFFITLSDAPHLDGKYTVFGRVIEGMDVLDKIEAGPTDE-RPKQ 146 (155)
T ss_dssp TTBSCBSSSGBTTSSSSSTTEEEEEBSSSSTTEBSSEEEEESSCGGGGTTTSEEEEEEEEHHHHHHHHHTSBBTT-EBSS
T ss_pred cCccccccccccccccccceeeeecccccCCCCCCceEEeeccCCCccccceeeeeEEehhHHHHHHHHCCCCCC-ccCC
Confidence 23446888863 3444489999999876 788999999999999999999999999999999999999999888 9999
Q ss_pred Cceeceeee
Q 006321 166 PVKIIDCGE 174 (650)
Q Consensus 166 ~I~I~~cge 174 (650)
+|+|.+|++
T Consensus 147 ~v~I~~cgv 155 (155)
T PF00160_consen 147 DVTISSCGV 155 (155)
T ss_dssp TEEEEEEEE
T ss_pred CeEEEEeEC
Confidence 999999985
No 26
>cd00317 cyclophilin cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP
Probab=100.00 E-value=4.3e-34 Score=269.48 Aligned_cols=144 Identities=58% Similarity=0.914 Sum_probs=128.3
Q ss_pred EEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcc
Q 006321 10 FLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESI 89 (650)
Q Consensus 10 ~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si 89 (650)
+|+|++| +|+||||+++||++|+||+.||+++ ||+||.||||+++|+||||++......+ ..
T Consensus 1 ~~~T~~G-----~i~IeL~~~~~P~~~~nF~~l~~~~-----------~Y~~~~f~rv~~~~~iq~Gd~~~~~~~~--~~ 62 (146)
T cd00317 1 TLDTTKG-----RIVIELYGDEAPKTVENFLSLARGG-----------FYDGTTFHRVIPGFMIQGGDPTGTGGGG--SG 62 (146)
T ss_pred CeEeccC-----cEEEEEcCCCChHHHHHHHHHHhcC-----------CcCCCEEEEEeCCCeEEECCCCCCCCCC--Cc
Confidence 4667665 9999999999999999999999765 8999999999999999999986554332 45
Q ss_pred cCCcccCCCCCCC-CCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCcccCc
Q 006321 90 YGGKFTDENFKLD-HNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPV 167 (650)
Q Consensus 90 ~g~~~~dE~~~l~-h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~-~gkP~~~I 167 (650)
++..+++|..... |+.+|+|+|++.+++++++||||+|.++++||++|+|||+|++||+||++|+.++++ ++.|+.+|
T Consensus 63 ~~~~~~~E~~~~~~~~~~G~v~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~~P~~~i 142 (146)
T cd00317 63 PGYKFPDENFPLKYHHRRGTLSMANAGPNTNGSQFFITTAPTPHLDGKHTVFGKVVEGMDVVDKIERGDTDENGRPIKPV 142 (146)
T ss_pred CCCccCCccccCcCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEeCCHHHHHHHHcCCCCCCCcCcCce
Confidence 6778888877655 889999999999999999999999999999999999999999999999999999997 78999999
Q ss_pred eece
Q 006321 168 KIID 171 (650)
Q Consensus 168 ~I~~ 171 (650)
+|..
T Consensus 143 ~I~~ 146 (146)
T cd00317 143 TISD 146 (146)
T ss_pred EEeC
Confidence 9963
No 27
>KOG0415 consensus Predicted peptidyl prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-34 Score=296.48 Aligned_cols=158 Identities=38% Similarity=0.630 Sum_probs=144.2
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~ 87 (650)
.|.|+|++| +|||+||.+++|.||.|||.|| +..||+.|.||-|..+|++|.||++ |+|.||.
T Consensus 2 sVlieTtlG-----DlvIDLf~~erP~~clNFLKLC-----------k~KYYN~clfh~vq~~f~aQTGDPt-GtG~GG~ 64 (479)
T KOG0415|consen 2 SVLIETTLG-----DLVIDLFVKERPRTCLNFLKLC-----------KIKYYNFCLFHTVQRDFTAQTGDPT-GTGDGGE 64 (479)
T ss_pred cEEEEeecc-----cEEeeeecccCcHHHHHHHHHH-----------hHhhcccceeeeccccceeecCCCC-CCCCCcc
Confidence 589999988 9999999999999999999999 4569999999999999999999985 6899999
Q ss_pred cccCC-------cccCC-CCCCCCCCCceEeeccCCCCCCCcceEEeeccC-CCCCCCceEEEEEEcCHHHHHHHHhcCC
Q 006321 88 SIYGG-------KFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQ-HHLDGKHVVFGKVVKGLNIVKKIEQVGT 158 (650)
Q Consensus 88 si~g~-------~~~dE-~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~-p~LDgk~tVFGrVIeGmDVLdkIe~v~t 158 (650)
+||+. .|++| ++.|+|.+.|+|+|+++|.|.+||||||||+++ ..||++|+|||+|++|||+|.+|+.+-+
T Consensus 65 si~~~lyG~q~rffeaE~~p~l~Hsk~G~vsmvs~g~n~~gSQF~iTlgenLdyLDg~htvfGqV~EG~dtl~kiNea~v 144 (479)
T KOG0415|consen 65 SIYGVLYGEQARFFEAEFLPKLKHSKMGTVSMVSAGENLNGSQFFITLGENLDYLDGKHTVFGQVAEGFDTLTKINEAIV 144 (479)
T ss_pred eeeeecccccchhhhhhhcccccccccceEEeecCCcccccceEEEEccccccccccccceeeehhhhHHHHHHHHHHhc
Confidence 99864 35556 467999999999999999999999999999875 8999999999999999999999998887
Q ss_pred C-CCCcccCceeceeeecccccccc
Q 006321 159 G-DGKPAQPVKIIDCGEFSESKIQD 182 (650)
Q Consensus 159 ~-~gkP~~~I~I~~cgel~~~~~~~ 182 (650)
+ ++.|.++|.|.+..+|.++|.++
T Consensus 145 D~~~rPykdIRI~HTiiLdDPFddp 169 (479)
T KOG0415|consen 145 DPKNRPYKDIRIKHTIILDDPFDDP 169 (479)
T ss_pred CCCCCcccceeeeeeEEecCCCCCc
Confidence 7 68999999999999999998654
No 28
>cd01924 cyclophilin_TLP40_like cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A, these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation.
Probab=100.00 E-value=5.1e-33 Score=271.96 Aligned_cols=126 Identities=36% Similarity=0.542 Sum_probs=107.8
Q ss_pred eeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCC---------------
Q 006321 19 PVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG--------------- 83 (650)
Q Consensus 19 ~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~g--------------- 83 (650)
..|+|+||||++.||+||+||+.||.. +||+++.||||+++||||||++...+.
T Consensus 5 ~~G~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Ydg~~FhRVi~~fviQgGdp~~~~~~~~~~~~~~~~~~p~ 73 (176)
T cd01924 5 DNGTITIVLDGYNAPVTAGNFVDLVER-----------GFYDGMEFHRVEGGFVVQTGDPQGKNPGFPDPETGKSRTIPL 73 (176)
T ss_pred ccceEEEEEcCCCCCHHHHHHHHHHHh-----------CCcCCCEEEEecCCcEEEecCCCCCCCCcccccccccccccc
Confidence 357999999999999999999999953 499999999999999999999854321
Q ss_pred -----CCCCcccCCcc-----cCCCCCCCCCCCceEeeccCC--CCCCCcceEEeec-------cCCCCCCCceEEEEEE
Q 006321 84 -----TGGESIYGGKF-----TDENFKLDHNGPGILSMANSG--ANTNGSQFFITFR-------RQHHLDGKHVVFGKVV 144 (650)
Q Consensus 84 -----sgg~si~g~~~-----~dE~~~l~h~~~G~Lsma~~g--~ns~gSqFFITL~-------~~p~LDgk~tVFGrVI 144 (650)
..+.++|+..+ .+++..+.|+.+|+|+||+.+ +|++++||||+|. +.++||++|+|||+|+
T Consensus 74 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laMa~~~~~~ns~~SQFfI~~~~~~~~~~~~~~Ldg~ytVFG~Vv 153 (176)
T cd01924 74 EIKPEGQKQPVYGKTLEEAGRYDEQPVLPFNAFGAIAMARTEFDPNSASSQFFFLLKDNELTPSRNNVLDGRYAVFGYVT 153 (176)
T ss_pred eecccCCCCCccCcccccccccccccccccCCCCeEEEccCCCCCCCccceEEEEeccccccCCCCCccCCCceEEEEEe
Confidence 12334555444 356677888999999999987 6999999999998 7899999999999999
Q ss_pred cCHHHHHHHHh
Q 006321 145 KGLNIVKKIEQ 155 (650)
Q Consensus 145 eGmDVLdkIe~ 155 (650)
+|||||++|+.
T Consensus 154 eG~dvl~~I~~ 164 (176)
T cd01924 154 DGLDILRELKV 164 (176)
T ss_pred cCHHHHHhhcC
Confidence 99999999976
No 29
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=97.92 E-value=7e-06 Score=89.60 Aligned_cols=146 Identities=22% Similarity=0.286 Sum_probs=115.3
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccC--C--
Q 006321 17 GDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYG--G-- 92 (650)
Q Consensus 17 g~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g--~-- 92 (650)
|.++--|.|+||..-.|..++-|..+| +.+|+++..|.+|+..+++|.||.......+|.--|+ .
T Consensus 108 Gd~~s~IAVs~~~sg~i~VvD~~~d~~-----------q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~ 176 (558)
T KOG0882|consen 108 GDKISLIAVSLFKSGKIFVVDGFGDFC-----------QDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGP 176 (558)
T ss_pred CCeeeeEEeecccCCCcEEECCcCCcC-----------ccceecccccCceEEEEeeccccceeeccccceeEeecCCCc
Confidence 445568999999999999999999999 4569999999999999999999864333333322111 1
Q ss_pred -cccC--CCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHhcCCCC-CCcccCce
Q 006321 93 -KFTD--ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-GKPAQPVK 168 (650)
Q Consensus 93 -~~~d--E~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~v~t~~-gkP~~~I~ 168 (650)
.|++ +++.++|. .-|+.+........+-+|+|+-+.++.|..+..|||.|..|-+|++.|.++.++. .+|..++.
T Consensus 177 ~qfPr~~l~~~~K~e-TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~ 255 (558)
T KOG0882|consen 177 FQFPRTNLNFELKHE-TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYG 255 (558)
T ss_pred ccCcccccccccccc-chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccc
Confidence 1222 35677775 6788888776667788999999999999999999999999999999999998874 46777888
Q ss_pred eceeee
Q 006321 169 IIDCGE 174 (650)
Q Consensus 169 I~~cge 174 (650)
|.++..
T Consensus 256 l~~Vel 261 (558)
T KOG0882|consen 256 LMHVEL 261 (558)
T ss_pred cceeeh
Confidence 888743
No 30
>PF12903 DUF3830: Protein of unknown function (DUF3830); InterPro: IPR024532 This is a family of bacterial and archaeal proteins. The structure of one of family members, A0JVT3 from SWISSPROT, has been characterised and shown to contain a cyclophilin-like fold.; PDB: 3KOP_B.
Probab=96.94 E-value=0.0026 Score=61.08 Aligned_cols=113 Identities=22% Similarity=0.285 Sum_probs=62.4
Q ss_pred EEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCc--eEEeCCCCCCCCCCCCcc
Q 006321 12 DVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGF--MIQGGDFSKGNGTGGESI 89 (650)
Q Consensus 12 dtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgf--vIQgGd~~~~~gsgg~si 89 (650)
.++++|. .++.+|+.+.||+||+.|.++. =|.+..+|-..-+. ||..+++.
T Consensus 2 ~~~~~g~---~~~A~l~~d~AP~Tcaa~~~~L--------------P~~~~~~HarwSG~ei~~~l~~~~---------- 54 (147)
T PF12903_consen 2 TLTKRGV---SFTARLLDDKAPKTCAAFWEAL--------------PLKGKVIHARWSGEEIWIPLPDFD---------- 54 (147)
T ss_dssp EETTTTE---EEEEEE-TTTSHHHHHHHHHH----------------EEEE-EE-SSSSSEEEEEEE--S----------
T ss_pred eEecCCe---EEEEEEcccCChHHHHHHHHhC--------------CCCCcEEEEEEECcEEEEECCCcC----------
Confidence 3444544 7899999999999999999987 28888888887664 66666653
Q ss_pred cCCcccCCCCCCCCCCCceEeec--c-C--C--CC-CCCcceEEeeccC------CCCCCCceEEEEEEcCHHHHHHHHh
Q 006321 90 YGGKFTDENFKLDHNGPGILSMA--N-S--G--AN-TNGSQFFITFRRQ------HHLDGKHVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 90 ~g~~~~dE~~~l~h~~~G~Lsma--~-~--g--~n-s~gSqFFITL~~~------p~LDgk~tVFGrVIeGmDVLdkIe~ 155 (650)
...+.-||..... .+|-|.+. . . + +. -....+|+-.++. -+|- -.||++|++|+|-|.++.+
T Consensus 55 -~~~~~~EN~T~~P-~pGdi~~~y~~~~~~~~~pg~~~e~~i~yg~g~~~f~~~~G~l~--GN~FatI~egle~la~~~~ 130 (147)
T PF12903_consen 55 -PFEPGRENHTVTP-IPGDILLYYEPGSAWGGNPGGISETEIFYGYGNLLFASKMGWLP--GNHFATITEGLEELAEACR 130 (147)
T ss_dssp -SS---S-SEESS---TTEEEEE-----------E-EEEEEEE-SSS---EETTTEE----EEEEEEEEESHHHHHHHHH
T ss_pred -cCCCCCCcCcccC-CCCcEEEEecCCccccCCCcceEEEEEEEeeCceEecCCccccc--eeEEEEEcCCHHHHHHHHH
Confidence 1223445554444 47777766 0 0 0 11 1123344333222 2232 4789999999998887765
No 31
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=96.81 E-value=0.0066 Score=67.99 Aligned_cols=114 Identities=22% Similarity=0.339 Sum_probs=70.4
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccCCCCCC
Q 006321 22 KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTDENFKL 101 (650)
Q Consensus 22 rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~dE~~~l 101 (650)
-|.|+||.+.||.+|..|..+. |-+. .----+.+|=.+++.+|.-|+. .++..+.+||..-
T Consensus 376 vi~IeLydd~AP~s~~yFRk~t-GL~~--------~~VG~L~v~F~~~d~~mFk~~~----------~~~k~LiPEN~P~ 436 (503)
T TIGR03268 376 VIEIELYDDNAPRSVWYFRKFT-GLKT--------KPVGRLPVHFAFKEMIMFKGNK----------ELAKGLIPENTPE 436 (503)
T ss_pred EEEEEEcccCCchHHHHHHHhc-CCcc--------cccceeEEEEEeCCeeEeccCc----------hhccccCCCCCCC
Confidence 6889999999999999999875 2110 0011234555566655543332 2234456676666
Q ss_pred CCCCCceEeeccCCCCCCCcceEEeeccCC-------CCCCCceEEEEEEcCHHHHHHHHhc
Q 006321 102 DHNGPGILSMANSGANTNGSQFFITFRRQH-------HLDGKHVVFGKVVKGLNIVKKIEQV 156 (650)
Q Consensus 102 ~h~~~G~Lsma~~g~ns~gSqFFITL~~~p-------~LDgk~tVFGrVIeGmDVLdkIe~v 156 (650)
.....|.|+|.|......| -.=|-|.++. .|++ ..|+|+|+++|+.|.+|.+.
T Consensus 437 ~~V~ag~IgvTN~a~k~~G-~IGVRl~d~defGPTGE~F~g-TNIiG~Vv~~~e~Lk~~KeG 496 (503)
T TIGR03268 437 DKVEAGVIGVTNQACKHVG-MIGVRLEDSDEFGPTGEPFSG-TNIIGRVVEGMERLKGLKEG 496 (503)
T ss_pred CccccceEeeechhhhcCc-eEEEEccCCcccCCCCCCccC-cceEEEecCChhHhcccccC
Confidence 6667899998875422111 2224444432 3444 45779999999999888763
No 32
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=96.54 E-value=0.01 Score=66.45 Aligned_cols=107 Identities=21% Similarity=0.278 Sum_probs=68.3
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccC
Q 006321 17 GDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTD 96 (650)
Q Consensus 17 g~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~d 96 (650)
.+-+-.+.|||.+ .||.+|++|+++..++. -+..|+. +-+|- .+...|..++.
T Consensus 197 ~~IfTy~evE~~~-~~p~s~EH~la~~~~G~------~~Vd~~t---------sTfi~-----------d~~L~g~~~p~ 249 (503)
T TIGR03268 197 DRIFTYVEVELDP-NAPVSVEHFLALMEDGT------FRVDYRT---------STFIS-----------DDSLRGLDKPE 249 (503)
T ss_pred CEEEEEEEEEEcC-CCChhHHHHHHHHhCCe------EEEeeee---------cceEe-----------cccccCccCCc
Confidence 3445678889875 49999999999986541 0111111 11111 11222445566
Q ss_pred CCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHh
Q 006321 97 ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 97 E~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~ 155 (650)
||+... ..|+|.+.+.|.+. ...||...+-+.- -.|+|+|+|+.|||+|+--+.
T Consensus 250 En~~~R--~rGtVTVRn~G~G~--G~VYIYredr~ss-~sHtvVG~V~~GiELid~a~~ 303 (503)
T TIGR03268 250 ENIEKR--RRGAVTVRNSGVGE--GRVYIYREDRPSS-LSHNVVGHVTRGIELIDIAQE 303 (503)
T ss_pred cccCcc--cceeEEEEeeccCc--eeEEEEcCCCCCC-cccceeEEEecceeeeecccC
Confidence 665433 47999999987543 4788888765422 349999999999999876554
No 33
>PRK00969 hypothetical protein; Provisional
Probab=96.50 E-value=0.014 Score=65.52 Aligned_cols=113 Identities=24% Similarity=0.315 Sum_probs=70.7
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccCCCCCC
Q 006321 22 KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTDENFKL 101 (650)
Q Consensus 22 rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~dE~~~l 101 (650)
-|.||||.+.||.||..|..+. |-. ..--=-+.+|=++++.+|.-|+. .++..+.+||..-
T Consensus 379 vi~IeLydd~AP~s~~yFR~~t-GL~--------~~~VG~L~v~F~~~d~~lFk~~~----------~~~k~liPEN~P~ 439 (508)
T PRK00969 379 LIEIELYDDKAPRTVWYFRKVT-GLK--------TKPVGKLPVYFKYEDTYLFKGNI----------EYAKGLLPENTPE 439 (508)
T ss_pred EEEEEEcCcCCchHHHHHHHhc-CCc--------ccccceeEEEEEeCCeEEEccCh----------hhccccCCCCCCC
Confidence 6889999999999999999876 210 00011244555666766654443 2334466677666
Q ss_pred CCCCCceEeeccCCCCCCCcceEEeeccCC-------CCCCCceEEEEEEcCHHHHHHHHhc
Q 006321 102 DHNGPGILSMANSGANTNGSQFFITFRRQH-------HLDGKHVVFGKVVKGLNIVKKIEQV 156 (650)
Q Consensus 102 ~h~~~G~Lsma~~g~ns~gSqFFITL~~~p-------~LDgk~tVFGrVIeGmDVLdkIe~v 156 (650)
.....|.|+|.|......| -.=|-|.++. .|++ ..|+|+|+ +++.|.+|.+.
T Consensus 440 ~~V~ag~IgvTN~a~k~~G-~iGVR~~d~d~fGPTGE~F~g-TNIIGrVv-~~e~Lk~lKeG 498 (508)
T PRK00969 440 DKVKAGEIGVTNMAAKYKG-MIGVRLSDNDEFGPTGEPFEG-TNIIGRVV-NLEKLKKLKEG 498 (508)
T ss_pred CccccceEeeechhhhcCc-eEEEEccCCcccCCCCCCccC-ceeEEEec-ChHHhcccccC
Confidence 6677899998875422111 2224444432 2333 56889999 99998888763
No 34
>PRK00969 hypothetical protein; Provisional
Probab=96.49 E-value=0.011 Score=66.42 Aligned_cols=107 Identities=21% Similarity=0.334 Sum_probs=68.6
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccC
Q 006321 17 GDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTD 96 (650)
Q Consensus 17 g~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~d 96 (650)
.+-+-.|.|||-++ ||..|++|+.|..++. -+..|+.++ |+. .+...|..++.
T Consensus 200 ~~IfTy~eve~~~~-~p~s~EH~la~~~~G~------f~Vd~~tst--------fI~------------d~~L~g~~~p~ 252 (508)
T PRK00969 200 MKIFTYVEVELDPG-APKSVEHFLALLEDGT------FEVDFETST--------FIA------------DDRLQGLKIPE 252 (508)
T ss_pred CEEEEEEEEEEcCC-CCchHHHHHHHHhCCe------EEEeeeecc--------eEe------------eccccCccCCc
Confidence 34456788888765 8999999999986541 011111111 111 11222445566
Q ss_pred CCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHh
Q 006321 97 ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 97 E~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~ 155 (650)
||+... ..|+|.+.+.|.+. ...||...+-+.- -.|+|+|+|+.|||+|+--+.
T Consensus 253 En~~~R--~~GtVTVRt~G~g~--G~vYIyredr~ss-~sHtvVG~V~~GiELi~~a~~ 306 (508)
T PRK00969 253 ENFEPR--RRGTVTVRTAGVGV--GKVYIYREDRPSS-LSHTVVGRVTHGIELIDFAKE 306 (508)
T ss_pred cccCcc--ccceEEEEeeccCc--eeEEEECCCCCCC-ccceeEEEEecceeeeecccC
Confidence 665433 47999999987543 4788988765422 349999999999999875444
No 35
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=96.42 E-value=0.0091 Score=64.92 Aligned_cols=107 Identities=25% Similarity=0.429 Sum_probs=71.3
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccC
Q 006321 17 GDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTD 96 (650)
Q Consensus 17 g~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~d 96 (650)
...+-.|.|||-.+ +|++|++|++|... |..=-.+..|.+|. .+...+..++.
T Consensus 199 drifTy~eve~s~n-sP~saEH~lalmed---------------G~lri~~~tntfis-----------~~~lq~~~~~~ 251 (512)
T COG4070 199 DRIFTYFEVELSRN-SPKSAEHFLALMED---------------GTLRIDVTTNTFIS-----------DDTLQEEKVPE 251 (512)
T ss_pred CEEEEEEEEEeCCC-CchhHHHHHHHhhc---------------ceEEEEEeccceee-----------ccccccccCCh
Confidence 34567888999875 89999999999843 32222222332221 12223456677
Q ss_pred CCCCCCCCCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEcCHHHHHHHHh
Q 006321 97 ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 97 E~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVLdkIe~ 155 (650)
||+.+.. +|+|.+.|.|-+. ...||.-.+-+.. -.|.|+|+|++||++|+-.+.
T Consensus 252 en~d~Re--rG~iTvRn~Gvge--GrvYIyRedR~ss-~sHnvVGrV~eGiELid~a~e 305 (512)
T COG4070 252 ENFDLRE--RGAITVRNVGVGE--GRVYIYREDRPSS-LSHNVVGRVIEGIELIDLAEE 305 (512)
T ss_pred hhhhhhh--cceEEEEeeeccc--ceEEEEecCCCCc-cccceeeeeecceEEEEeccc
Confidence 7776654 7999999877543 4788887654322 248999999999999876654
No 36
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=95.83 E-value=0.023 Score=61.87 Aligned_cols=115 Identities=20% Similarity=0.266 Sum_probs=64.2
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCc--eEEeCCCCCCCCCCCCcccCCcccCCCC
Q 006321 22 KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGF--MIQGGDFSKGNGTGGESIYGGKFTDENF 99 (650)
Q Consensus 22 rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgf--vIQgGd~~~~~gsgg~si~g~~~~dE~~ 99 (650)
-|+||||.+.||.+|..|..+..-. . ++ ---..+|-+.++. ++.-|+ ..++..+..||.
T Consensus 377 iieIELyed~APrSv~yFRr~t~l~-~------kp--VGkL~Vhfay~d~~~vmfegn----------~~~~K~llPEN~ 437 (512)
T COG4070 377 IIEIELYEDRAPRSVWYFRRSTGLK-T------KP--VGKLKVHFAYDDTYLVMFEGN----------AVLAKGLLPENT 437 (512)
T ss_pred EEEEEecCCCCchhhHHHHhhcccc-c------cc--ccceEEEEEeCCceEEEEcCC----------hHHhccCCCCCC
Confidence 6899999999999999998875211 0 00 1123444455552 222222 123344555655
Q ss_pred CCCCCCCceEeeccCCCCCCCcceEEeeccCCCC------CCCceEEEEEEcCHHHHHHHHhc
Q 006321 100 KLDHNGPGILSMANSGANTNGSQFFITFRRQHHL------DGKHVVFGKVVKGLNIVKKIEQV 156 (650)
Q Consensus 100 ~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p~L------Dgk~tVFGrVIeGmDVLdkIe~v 156 (650)
......+|.|++.|...-..| ..-+-|.+...+ -....|+|+|++|.+-|..|...
T Consensus 438 P~d~Ve~g~iGvTN~a~r~~G-mIGVRL~dsdefGPTGE~Fe~TNiIGrIveg~e~l~~ikeG 499 (512)
T COG4070 438 PADTVEAGEIGVTNQAARHMG-MIGVRLEDSDEFGPTGEKFEGTNIIGRIVEGPERLIGIKEG 499 (512)
T ss_pred chhheecccccccccchhccc-eeEEEeccccccCCCCCccccceeehhhccChHHhcccccC
Confidence 554555666665543211111 122334333222 23467889999999999888773
No 37
>KOG2985 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.03 E-value=0.069 Score=55.20 Aligned_cols=18 Identities=44% Similarity=0.589 Sum_probs=7.6
Q ss_pred HHhhhcccCCCCCCCCCC
Q 006321 216 KRRQKRKRRYPSSDSSGS 233 (650)
Q Consensus 216 ~~krk~~~~~~ssds~ds 233 (650)
.+|+|+++...+++++|+
T Consensus 179 ~rKkkkRrrd~SdssSDS 196 (306)
T KOG2985|consen 179 VRKKKKRRRDESDSSSDS 196 (306)
T ss_pred hhhhhhhccccccccccc
Confidence 343444444444444443
No 38
>PF04126 Cyclophil_like: Cyclophilin-like; InterPro: IPR007256 Proteins of this family have no known function.; PDB: 2KA0_A 1ZX8_C 2NNZ_A.
Probab=93.51 E-value=0.25 Score=46.00 Aligned_cols=103 Identities=20% Similarity=0.276 Sum_probs=55.0
Q ss_pred EEEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCccc
Q 006321 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (650)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~ 90 (650)
+.|++|+. .|.++|+.. .|++.|++++ +-+.....|-+-.++.+ +
T Consensus 3 I~i~i~~~---~~~a~L~d~---~ta~~~~~~L-------Plt~~~~~~g~E~y~~~-p--------------------- 47 (120)
T PF04126_consen 3 IKITIGGQ---EIEAELNDS---PTARAFAAQL-------PLTVTMNDWGNEKYFSL-P--------------------- 47 (120)
T ss_dssp EEEEETTE---EEEEEEETT---HHHHHHHHC--------SEEEEEEECTTEEEEE--S---------------------
T ss_pred EEEEECCE---EEEEEECCC---HHHHHHHHhC-------CeEEEHHHCCceEEEeC-C---------------------
Confidence 56777754 799999977 7899999877 11111112221111111 0
Q ss_pred CCccc-CCCCCCCCCCCceEeeccCCCCCCCcceEEeeccCC-------CCCCCceEEEEEEcCHHHHHHHHh
Q 006321 91 GGKFT-DENFKLDHNGPGILSMANSGANTNGSQFFITFRRQH-------HLDGKHVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 91 g~~~~-dE~~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~p-------~LDgk~tVFGrVIeGmDVLdkIe~ 155 (650)
..+. +++.. .....|.|+.... +..|.|-+++.| .+-...++||+|+.|+++|.+|..
T Consensus 48 -~~l~~~~~~~-~~~~~GDi~Yw~p-----g~~l~ifyg~~p~S~~~~~~~~~~v~~lG~i~~~~~~l~~~~~ 113 (120)
T PF04126_consen 48 -LKLPTEENPR-SSVEAGDIAYWPP-----GGALAIFYGDTPISEGGEIRPASPVNVLGRIVSDLENLKEVKG 113 (120)
T ss_dssp ------SSSEE-SSB-TTEEEEECC-----CTEEEEESS--TT--TTSB--SSSEEEEEEEEC-GGGGGG--T
T ss_pred -CCCCcccCcc-ccccCceEEEeCC-----CCEEEEEecCcccccccccccCCcceEEEEECCCHHHHhhCCC
Confidence 0111 12222 2235788888643 335667666653 456679999999999999888865
No 39
>KOG3116 consensus Predicted C3H1-type Zn-finger protein [General function prediction only]
Probab=92.89 E-value=0.26 Score=47.42 Aligned_cols=13 Identities=69% Similarity=0.593 Sum_probs=5.6
Q ss_pred CCCCCCCcccccC
Q 006321 301 SSRSSSDSESLSS 313 (650)
Q Consensus 301 ~s~S~sd~~s~s~ 313 (650)
++.|++|+++.+.
T Consensus 141 sSsSssdSdS~s~ 153 (177)
T KOG3116|consen 141 SSSSSSDSDSESA 153 (177)
T ss_pred ccCCCCccccccc
Confidence 3444444444433
No 40
>KOG3794 consensus CBF1-interacting corepressor CIR and related proteins [Transcription]
Probab=69.93 E-value=1.5 Score=48.32 Aligned_cols=17 Identities=12% Similarity=-0.007 Sum_probs=11.9
Q ss_pred CCChHHHHHHHHHhcCC
Q 006321 30 DVVPKTAENFRALCTGE 46 (650)
Q Consensus 30 d~APktv~NFl~Lc~g~ 46 (650)
.|++.+-+-|-.||.+.
T Consensus 94 ewq~~~eapRE~~ak~~ 110 (453)
T KOG3794|consen 94 EWQRKYEAPREKLAKAP 110 (453)
T ss_pred cccccccccHHHHhcCC
Confidence 35676667788888765
No 41
>PHA03001 putative virion core protein; Provisional
Probab=69.05 E-value=13 Score=35.16 Aligned_cols=50 Identities=24% Similarity=0.333 Sum_probs=36.7
Q ss_pred eEEEEEEeCCeeeeeEEEEEcCCCChH------HHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecC
Q 006321 8 LVFLDVSIDGDPVEKIVIELFADVVPK------TAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKG 70 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APk------tv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipg 70 (650)
-|||++..|.. .|.|++-+..||. ++++||++.. |...-+-+.|+=+|++
T Consensus 5 NIfLEsd~grv---kl~~~~~~~~~~~~~~~~ka~~~fl~~L~----------kYi~v~eStFylvvrd 60 (132)
T PHA03001 5 NIFLETDAGRV---KLAIENPDKVCATKAEMRKAINKFLELLK----------KYIHVDKSTFYLVVKD 60 (132)
T ss_pred EEEEeccCCce---EEEEcCCCccccccchHHHHHHHHHHHHH----------hhEEecccEEEEEEec
Confidence 47899887733 4566666666664 7899999873 4456788999999887
No 42
>KOG2812 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.02 E-value=2.3 Score=46.37 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=8.8
Q ss_pred hhhccccchhHHHhhhcccC
Q 006321 205 ETVRRHKKSSKKRRQKRKRR 224 (650)
Q Consensus 205 ~~kkk~K~~~k~~krk~~~~ 224 (650)
+.+...|+++|+.+.|++++
T Consensus 192 ~seed~KkkskRsk~kk~sk 211 (426)
T KOG2812|consen 192 GSEEDRKKKSKRSKKKKKSK 211 (426)
T ss_pred cchhhhhhhhhhhhhhcccc
Confidence 33445555444443344443
No 43
>KOG2140 consensus Uncharacterized conserved protein [General function prediction only]
Probab=62.03 E-value=4.8 Score=46.19 Aligned_cols=11 Identities=36% Similarity=0.706 Sum_probs=8.9
Q ss_pred CCCCcceEEee
Q 006321 117 NTNGSQFFITF 127 (650)
Q Consensus 117 ns~gSqFFITL 127 (650)
|...+.|-|+|
T Consensus 619 np~n~RfsINf 629 (739)
T KOG2140|consen 619 NPRNTRFSINF 629 (739)
T ss_pred Ccccceeeeeh
Confidence 56678899988
No 44
>COG2164 Uncharacterized conserved protein [Function unknown]
Probab=60.32 E-value=13 Score=34.22 Aligned_cols=32 Identities=28% Similarity=0.533 Sum_probs=21.8
Q ss_pred EEeeccCCCCCCC------ceEEEEEEcCHHHHHHHHh
Q 006321 124 FITFRRQHHLDGK------HVVFGKVVKGLNIVKKIEQ 155 (650)
Q Consensus 124 FITL~~~p~LDgk------~tVFGrVIeGmDVLdkIe~ 155 (650)
.|.|+..|.-|.+ ..|+|+|+++|+.|..|..
T Consensus 80 ClFFGkTpmsddkiqPaSaVNvIGrIv~~lE~lk~v~d 117 (126)
T COG2164 80 CLFFGKTPMSDDKIQPASAVNVIGRIVKNLELLKSVDD 117 (126)
T ss_pred EEEecCCcCcccccCccchHHHHHHHHhhHHhhhcccC
Confidence 3444444555543 4589999999999887765
No 45
>PF06138 Chordopox_E11: Chordopoxvirus E11 protein; InterPro: IPR009201 This group represents a virion core protein, vaccinia E11L type.
Probab=54.28 E-value=44 Score=31.76 Aligned_cols=48 Identities=10% Similarity=0.261 Sum_probs=32.9
Q ss_pred eEEEEEEeCCeeeeeEEEEEc--CCCChH-------HHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecC
Q 006321 8 LVFLDVSIDGDPVEKIVIELF--ADVVPK-------TAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKG 70 (650)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf--~d~APk-------tv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipg 70 (650)
-|||++..| ++.|..- ...||. +++.||++.. +...-+-..|+=+|++
T Consensus 5 NIfLEsd~g-----rvkl~~~~~~~~c~~~~~~~~~Av~~Fl~~L~----------kyI~veeStFylvvrd 61 (130)
T PF06138_consen 5 NIFLESDSG-----RVKLRYEEPDCKCARTGCEARRAVKHFLSVLK----------KYIDVEESTFYLVVRD 61 (130)
T ss_pred EEEEeccCc-----eeEEEEeCCCcccccccchHHHHHHHHHHHHH----------hhEEecccEEEEEEec
Confidence 478888877 5554444 433333 6889999883 3445678899988887
No 46
>KOG0526 consensus Nucleosome-binding factor SPN, POB3 subunit [Transcription; Replication, recombination and repair; Chromatin structure and dynamics]
Probab=50.68 E-value=1.9e+02 Score=33.77 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=10.8
Q ss_pred CCCCCCeEEEEEEeC
Q 006321 2 SEKKNPLVFLDVSID 16 (650)
Q Consensus 2 ~~~~np~V~fdtsig 16 (650)
+++.-+.|||-|+++
T Consensus 248 Pk~d~rh~~fVisld 262 (615)
T KOG0526|consen 248 PKKDQRHVYFVISLD 262 (615)
T ss_pred cCCCCceEEEEEecC
Confidence 455567888888875
No 47
>PF02505 MCR_D: Methyl-coenzyme M reductase operon protein D; InterPro: IPR003901 Methyl-coenzyme M reductase (MCR) catalyses the reduction of methyl-coenzyme M (CH3-SCoM) and coenzyme B (HS-CoB) to methane and the corresponding heterosulphide CoM-S-S-CoB (2.8.4.1 from EC), the final step in methane biosynthesis. This reaction proceeds under anaerobic conditions by methanogenic Archaea [], and requires a nickel-porphinoid prosthetic group, coenzyme F430, which is in the EPR-detectable Ni(I) oxidation state in the active enzyme. Studies on a catalytically inactive enzyme aerobically co-crystallized with coenzyme M displayed a fully occupied coenzyme M-binding site with no alternate conformations. The binding of coenzyme M appears to induce specific conformational changes that suggests a molecular mechanism by which the enzyme ensures that methyl-coenzyme M enters the substrate channel prior to coenzyme B, as required by the active-site geometry []. MCR is a hexamer composed of 2 alpha, 2 beta, and 2 gamma subunits with two identical nickel porphinoid active sites, which form two long active site channels with F430 embedded at the bottom [, ]. Genes encoding the beta (mcrB) and gamma (mcrG) subunits of MCR are separated by two open reading frames coding for two proteins C and D [, ]. The function of proteins C and D is unknown. This entry represents protein D.; GO: 0015948 methanogenesis
Probab=44.45 E-value=2.2e+02 Score=28.01 Aligned_cols=21 Identities=33% Similarity=0.512 Sum_probs=18.0
Q ss_pred EEEEEcCC--CChHHHHHHHHHh
Q 006321 23 IVIELFAD--VVPKTAENFRALC 43 (650)
Q Consensus 23 IvIELf~d--~APktv~NFl~Lc 43 (650)
|.||+|+. .-|.|++.||+..
T Consensus 1 iqieIfP~R~L~peTtEklLN~l 23 (153)
T PF02505_consen 1 IQIEIFPHRLLKPETTEKLLNEL 23 (153)
T ss_pred CcEEEechhcCCHHHHHHHHHHH
Confidence 45788886 7899999999987
No 48
>KOG3953 consensus SOCS box protein SSB-1, contains SPRY domain [General function prediction only]
Probab=40.19 E-value=84 Score=32.90 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=30.6
Q ss_pred EEEEEEeCCeeee-eEEEEEcCCCChHHHHHHHHHhcC
Q 006321 9 VFLDVSIDGDPVE-KIVIELFADVVPKTAENFRALCTG 45 (650)
Q Consensus 9 V~fdtsigg~~~G-rIvIELf~d~APktv~NFl~Lc~g 45 (650)
=+++|+.-+.++| ..||.+++..||.+|.-|++|+-.
T Consensus 71 h~w~i~w~~r~~GT~avVGIaTk~Aplha~gy~aLlGs 108 (242)
T KOG3953|consen 71 HAWEIAWPNRQRGTHAVVGIATKVAPLHAVGYTALLGS 108 (242)
T ss_pred eEEEEEecCCccCCcceEEEEcccCchhhhHHHHHhCC
Confidence 3567777766777 679999999999999999999843
No 49
>KOG2236 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.88 E-value=15 Score=41.52 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=16.9
Q ss_pred CCCcceEEeeccCCCCCCCceEEEEEEcCHHHH
Q 006321 118 TNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIV 150 (650)
Q Consensus 118 s~gSqFFITL~~~p~LDgk~tVFGrVIeGmDVL 150 (650)
..+|-|||.- -..|-.-|-|||.|-.=++||
T Consensus 234 de~Svlf~ed--R~~lG~I~EiFGpV~~P~Yvv 264 (483)
T KOG2236|consen 234 DEDSVLFLED--RTALGQIFEIFGPVKNPYYVV 264 (483)
T ss_pred cccceEEeec--cccchhhhhhhcccCCceEEE
Confidence 3455555543 233333467888876655554
No 50
>KOG2548 consensus SWAP mRNA splicing regulator [RNA processing and modification]
Probab=37.95 E-value=25 Score=40.42 Aligned_cols=6 Identities=17% Similarity=0.157 Sum_probs=2.7
Q ss_pred HHHHHh
Q 006321 38 NFRALC 43 (650)
Q Consensus 38 NFl~Lc 43 (650)
.||++.
T Consensus 39 QflQ~h 44 (653)
T KOG2548|consen 39 QFLQAH 44 (653)
T ss_pred HHHHHh
Confidence 444443
No 51
>KOG3869 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.23 E-value=11 Score=42.05 Aligned_cols=9 Identities=22% Similarity=0.287 Sum_probs=4.2
Q ss_pred CCChHHHHH
Q 006321 30 DVVPKTAEN 38 (650)
Q Consensus 30 d~APktv~N 38 (650)
-|.|.+..|
T Consensus 11 sWhp~~mkN 19 (450)
T KOG3869|consen 11 SWHPELMKN 19 (450)
T ss_pred ccChhhhcc
Confidence 344554444
No 52
>COG2927 HolC DNA polymerase III, chi subunit [DNA replication, recombination, and repair]
Probab=31.64 E-value=1.3e+02 Score=29.24 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=48.2
Q ss_pred eEEEEEcCCCChH-HHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCCCCCCCCCCCcccCCcccCCCCC
Q 006321 22 KIVIELFADVVPK-TAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIYGGKFTDENFK 100 (650)
Q Consensus 22 rIvIELf~d~APk-tv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~~~~~gsgg~si~g~~~~dE~~~ 100 (650)
++.|-|..+.++. .+-.++.-| +..|..+ +|||+|.......... -.+|.++.|
T Consensus 3 ~~~FY~l~~~~~~~~~c~L~~k~--------------~~~G~rv-------lI~~~d~~q~e~LD~~---LWt~~~~sF- 57 (144)
T COG2927 3 EATFYLLSESTLLAAACRLAEKA--------------WRSGWRV-------LIQCEDEAQAEALDEH---LWTFSAESF- 57 (144)
T ss_pred eeEEEEecchhHHHHHHHHHHHH--------------HHcCCeE-------EEEeCCHHHHHHHHHh---hhccchhcc-
Confidence 4566666666666 555666666 5566555 7888874211000000 012222221
Q ss_pred CCC---------CCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEE-EEEEcC
Q 006321 101 LDH---------NGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVF-GKVVKG 146 (650)
Q Consensus 101 l~h---------~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVF-GrVIeG 146 (650)
+.| ..+=+|++....+|.+.-.|.|.|.+....- ...| -+|+++
T Consensus 58 iPH~~~~e~~~~~qPIli~~~~~~pn~~~~~~lInl~d~~~~~--~~~~~~~v~d~ 111 (144)
T COG2927 58 IPHNLAGEPPPAGQPILIAWPGGNPNSARVDLLINLADEFPDF--AYEFVTRVFDF 111 (144)
T ss_pred cCCccCCCCCCCCCCEEEEcCCCCCCCCceeEEEeccccCCCc--cceEEEEEeec
Confidence 222 2232344433334444457999997654322 2334 667776
No 53
>KOG4676 consensus Splicing factor, arginine/serine-rich [RNA processing and modification]
Probab=31.61 E-value=40 Score=37.62 Aligned_cols=20 Identities=20% Similarity=0.564 Sum_probs=11.0
Q ss_pred CCeeeeeEEEEEcCCCChHHHHH
Q 006321 16 DGDPVEKIVIELFADVVPKTAEN 38 (650)
Q Consensus 16 gg~~~GrIvIELf~d~APktv~N 38 (650)
||..+| ||++. +++|.++..
T Consensus 3 gg~~~~--vIqva-nispsat~d 22 (479)
T KOG4676|consen 3 GGSSLG--VIQVA-NISPSATKD 22 (479)
T ss_pred CCCCCc--eeeec-ccCchhhHH
Confidence 444455 55544 567777643
No 54
>TIGR03260 met_CoM_red_D methyl-coenzyme M reductase operon protein D. Members of this protein family are protein D, a non-structural protein, of the operon for methyl coenzyme M reductase, also called coenzyme-B sulfoethylthiotransferase (EC 2.8.4.1). That enzyme, with alpha, beta, and gamma subunits, catalyzes the last step in methanogenesis; it has several modified sites, so accessory proteins are expected. Several methanogens have encode two such enzymes, designated I and II; this model does not separate the isozymes. Proteins in this family are expressed at much lower levels than the methyl-coenzyme M reductase itself and associate and have been shown to form at least transient associations. The precise function is unknown.
Probab=31.33 E-value=4.8e+02 Score=25.67 Aligned_cols=19 Identities=21% Similarity=0.391 Sum_probs=15.8
Q ss_pred EEEcCC--CChHHHHHHHHHh
Q 006321 25 IELFAD--VVPKTAENFRALC 43 (650)
Q Consensus 25 IELf~d--~APktv~NFl~Lc 43 (650)
||+|+. .-|.|++.||+-.
T Consensus 2 ieIfP~R~L~~eTtEklLN~l 22 (150)
T TIGR03260 2 VEIFPHRLLKAETTEKLLNKL 22 (150)
T ss_pred cEEechhhCCHHHHHHHHHHh
Confidence 567775 7899999999977
No 55
>KOG2740 consensus Clathrin-associated protein medium chain [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.40 E-value=16 Score=40.35 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=87.9
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeecCceEEeCCC----CCCCCCC-CCcccCCcccC
Q 006321 22 KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDF----SKGNGTG-GESIYGGKFTD 96 (650)
Q Consensus 22 rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVipgfvIQgGd~----~~~~gsg-g~si~g~~~~d 96 (650)
.+.+-.-.+.-|..|-.|+.-+... -.-||.++..-.|.+|+++.--.+ .+|-... .+.|..+-++.
T Consensus 66 ~~~~~st~e~pPL~~iefL~rv~dv--------~~eyFg~~s~~~Ik~N~~vv~ell~emiDnGfpl~tE~NiLke~i~p 137 (418)
T KOG2740|consen 66 FFCAVSTVETPPLMVIEFLHRVVDV--------LLEYFGGLSESKIKDNVVVVYELLDEMIDNGFPLVTEPNILKELIPP 137 (418)
T ss_pred EEEEEEeccCCChhHHHHHHHHHHH--------HHHHhcccCHhHhhcceeeHHHHHHHHHHcCCCcccChhHHHhhcCC
Confidence 4555555667799999998766432 123889999988888875542211 1111111 11111111111
Q ss_pred CC----------------CCCCCCCCceEeeccCCCCCCCcceEEeeccC--CCCC-CCceEEEEEEcCHHHHHHHHhcC
Q 006321 97 EN----------------FKLDHNGPGILSMANSGANTNGSQFFITFRRQ--HHLD-GKHVVFGKVVKGLNIVKKIEQVG 157 (650)
Q Consensus 97 E~----------------~~l~h~~~G~Lsma~~g~ns~gSqFFITL~~~--p~LD-gk~tVFGrVIeGmDVLdkIe~v~ 157 (650)
.+ -.|.....-+|-|..++....+.+|||-+-+. ..+| ..-+|||.|-.-+|+.-+|..+|
T Consensus 138 ps~l~~~~~svTg~~n~~~~lPtg~~s~VPWR~~~~Ky~nNE~yvdvlEeidai~~k~gslv~~eI~g~vd~~~qLsgmP 217 (418)
T KOG2740|consen 138 PSFLSKKFNSVTGNSNVSDTLPTGALSNVPWRTAGVKYTNNEAYVDVLEEIDAIVDKKGSLVFGEIQGIVDVCSQLSGMP 217 (418)
T ss_pred hHHHHHHHhhhhccccccccCCCcccccccccccCcccccchhhhhhhheeheEecCCCCEEEEEEEEEEEEEEeecCCC
Confidence 11 11223333456676777777778999977432 1222 23599999988888888888777
Q ss_pred C-----CCCCcccCceeceeeecccc
Q 006321 158 T-----GDGKPAQPVKIIDCGEFSES 178 (650)
Q Consensus 158 t-----~~gkP~~~I~I~~cgel~~~ 178 (650)
. .++..+.++....|..+..-
T Consensus 218 dltlsl~np~~L~dvsfHpcVr~krw 243 (418)
T KOG2740|consen 218 DLTLSLNNPRLLGDVSFHPCVRYKRW 243 (418)
T ss_pred ceEEEccCccccCCcccccceeeccc
Confidence 5 25677777778888776553
No 56
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=28.93 E-value=29 Score=38.38 Aligned_cols=51 Identities=18% Similarity=0.248 Sum_probs=34.6
Q ss_pred CCCceEeeccCCCCCCCcceEEeeccCCCCCCCceEEEEEEc-CHHHHHHHHh
Q 006321 104 NGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK-GLNIVKKIEQ 155 (650)
Q Consensus 104 ~~~G~Lsma~~g~ns~gSqFFITL~~~p~LDgk~tVFGrVIe-GmDVLdkIe~ 155 (650)
-..|.|.+.|......-.+.-|++.+.|. |....|+|+|++ -|.+|+-|..
T Consensus 298 r~~G~ItIdN~~ygRY~GElQI~~~dlp~-d~rvNViG~V~~~d~~LLd~I~~ 349 (357)
T PF05913_consen 298 RKRGDITIDNENYGRYKGELQIVKKDLPA-DERVNVIGRVDEEDLPLLDYIKP 349 (357)
T ss_dssp B-TTEEEEE-GGGGGGTT-EEEESS-B----TTEEEEEEE-GGGGGGGGG--T
T ss_pred ccCceEEEeCCCccccccEEEEEcccCCC-CCCeeEEEEECHHHHHHHHhcCC
Confidence 45899999987666667799999999876 888999999995 6888888875
No 57
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=22.20 E-value=1.2e+02 Score=33.91 Aligned_cols=52 Identities=15% Similarity=0.266 Sum_probs=41.5
Q ss_pred cceEEeec---------cCCCCCCCceEEEEEEcCHH-HHHHHHhcCCCCCCcccCceecee
Q 006321 121 SQFFITFR---------RQHHLDGKHVVFGKVVKGLN-IVKKIEQVGTGDGKPAQPVKIIDC 172 (650)
Q Consensus 121 SqFFITL~---------~~p~LDgk~tVFGrVIeGmD-VLdkIe~v~t~~gkP~~~I~I~~c 172 (650)
-+||+|-. +-+|--|.||+=|-.+.=|| -|..|..+|..+-....+..++|+
T Consensus 248 vE~Fv~~dg~llvNEiAPRvHNSGH~T~~gc~~SQFEqHlRAv~glPLg~~~~~~p~vMvNl 309 (375)
T COG0026 248 VEFFVTPDGELLVNEIAPRVHNSGHWTIDGCETSQFEQHLRAVLGLPLGSTTLLSPSVMVNL 309 (375)
T ss_pred EEEEEECCCcEEEeeccCCCCCccccchhhccccHHHHHHHHHhCCCCCCccccCceEEEEe
Confidence 48999865 34688899999999998888 689999999877666667666665
No 58
>KOG3064 consensus RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger [RNA processing and modification]
Probab=22.12 E-value=45 Score=35.29 Aligned_cols=9 Identities=33% Similarity=0.892 Sum_probs=4.7
Q ss_pred cceEEeecc
Q 006321 121 SQFFITFRR 129 (650)
Q Consensus 121 SqFFITL~~ 129 (650)
+|++|.+.-
T Consensus 116 TQylir~rk 124 (303)
T KOG3064|consen 116 TQYLIRMRK 124 (303)
T ss_pred HHHHHHHHH
Confidence 455555543
No 59
>KOG4146 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones]
Probab=21.96 E-value=4e+02 Score=24.25 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=24.3
Q ss_pred CCCCCCCeEEE----EEEeCCeeeeeEEEEEcCCCChHHHHHHHHHhcC
Q 006321 1 MSEKKNPLVFL----DVSIDGDPVEKIVIELFADVVPKTAENFRALCTG 45 (650)
Q Consensus 1 m~~~~np~V~f----dtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g 45 (650)
|++..+.+|-| ++..++..+-.+.++. .+.|.|+.+.+....+
T Consensus 1 ~~~~~~vkvef~Gg~dllfn~~k~~~~~l~~--~e~~~tvgdll~yi~~ 47 (101)
T KOG4146|consen 1 IPEAHEVKVEFLGGLDLLFNKQKIHLTRLEV--GESPATVGDLLDYIFG 47 (101)
T ss_pred CCcceeEEEEEcCceeeeECCeEEEEEeccc--CCCcccHHHHHHHHHH
Confidence 45555555543 3333433333333333 6789999999887754
No 60
>COG0219 CspR Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]
Probab=21.76 E-value=91 Score=30.68 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=29.5
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCCCCccccCceEEEeec
Q 006321 22 KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIK 69 (650)
Q Consensus 22 rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~FhRVip 69 (650)
.|.|.||.-+.|..+.|.+.+|. ..|+.+|-|.|
T Consensus 2 ~~~IvL~~PeIP~NTGNI~R~ca--------------~tga~LhlI~P 35 (155)
T COG0219 2 MLNIVLYQPEIPPNTGNIIRTCA--------------ATGAELHLIEP 35 (155)
T ss_pred ccEEEEECCCCCCchhHHHHHHH--------------hcCCeEEEEcc
Confidence 36899999999999999999994 67889998866
No 61
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=21.35 E-value=1.5e+02 Score=36.74 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=25.7
Q ss_pred CCCCCcceEEee-----------ccCCCCCCCceEE---EEEEcCHHH
Q 006321 116 ANTNGSQFFITF-----------RRQHHLDGKHVVF---GKVVKGLNI 149 (650)
Q Consensus 116 ~ns~gSqFFITL-----------~~~p~LDgk~tVF---GrVIeGmDV 149 (650)
-+.+|.|..|+. .-.|.||..-++| |.|+-+|..
T Consensus 1274 FHP~g~eVIINSEIwD~RTF~lLh~VP~Ldqc~VtFNstG~VmYa~~~ 1321 (1516)
T KOG1832|consen 1274 FHPSGNEVIINSEIWDMRTFKLLHSVPSLDQCAVTFNSTGDVMYAMLN 1321 (1516)
T ss_pred ccCCCceEEeechhhhhHHHHHHhcCccccceEEEeccCccchhhhhh
Confidence 367788888874 3458999988888 778877773
Done!