Query 006327
Match_columns 650
No_of_seqs 562 out of 3709
Neff 8.7
Searched_HMMs 13730
Date Mon Mar 25 22:03:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006327.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006327hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 4.1E-26 3E-30 215.7 14.2 159 150-317 6-176 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 1.4E-25 1E-29 211.9 16.6 166 231-405 7-173 (183)
3 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 5.1E-18 3.7E-22 140.2 11.8 81 326-406 5-85 (93)
4 d1whwa_ d.58.7.1 (A:) Probable 99.7 7E-18 5.1E-22 141.3 12.2 81 327-407 7-87 (99)
5 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 5.6E-18 4.1E-22 138.5 11.1 81 327-407 6-86 (88)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 4.1E-18 3E-22 137.5 9.5 77 329-405 3-79 (82)
7 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 4.1E-18 3E-22 140.8 9.4 83 148-230 7-89 (93)
8 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 4.6E-18 3.4E-22 140.4 9.3 82 147-228 4-85 (93)
9 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 2.9E-18 2.1E-22 138.4 7.8 80 150-229 2-81 (82)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.7 5.3E-18 3.9E-22 136.0 9.3 77 330-406 2-78 (80)
11 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 1E-17 7.3E-22 141.2 10.8 83 327-410 9-91 (103)
12 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 1.1E-17 7.9E-22 135.0 10.5 78 329-406 3-80 (82)
13 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 7.3E-18 5.4E-22 136.7 9.0 79 329-407 2-80 (85)
14 d2cqca1 d.58.7.1 (A:109-191) A 99.7 1.2E-17 9.1E-22 134.9 10.3 76 327-402 8-83 (83)
15 d1cvja1 d.58.7.1 (A:11-90) Pol 99.7 5.7E-18 4.2E-22 135.8 8.2 77 152-228 2-78 (80)
16 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 4.8E-18 3.5E-22 139.6 7.7 84 147-230 5-88 (90)
17 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 6.5E-18 4.8E-22 138.0 8.5 82 147-228 4-85 (88)
18 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 1E-17 7.3E-22 135.2 9.3 80 150-229 2-81 (82)
19 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 1.2E-17 9E-22 137.8 9.9 80 328-407 9-88 (93)
20 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 1.7E-17 1.3E-21 148.1 11.6 79 328-406 42-120 (139)
21 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 1.5E-17 1.1E-21 132.5 9.9 76 330-406 2-77 (78)
22 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 7.8E-18 5.7E-22 136.2 8.3 78 149-227 5-82 (84)
23 d1fxla2 d.58.7.1 (A:119-203) H 99.7 2E-17 1.5E-21 134.1 10.6 77 328-404 6-84 (85)
24 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 1.7E-17 1.2E-21 136.3 10.2 80 327-406 7-86 (90)
25 d2cqca1 d.58.7.1 (A:109-191) A 99.7 5.8E-18 4.3E-22 136.9 7.4 77 148-224 7-83 (83)
26 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 2.1E-17 1.5E-21 134.2 10.7 78 328-405 6-85 (85)
27 d2cpza1 d.58.7.1 (A:383-484) C 99.7 2E-17 1.5E-21 139.0 10.9 81 327-407 17-97 (102)
28 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 8.8E-18 6.4E-22 137.6 8.4 80 327-406 4-83 (89)
29 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 1.1E-17 7.9E-22 137.0 8.8 82 146-229 4-85 (90)
30 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 5.8E-18 4.2E-22 134.4 6.9 76 329-405 1-76 (77)
31 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 8.9E-18 6.5E-22 136.2 8.2 79 151-229 2-80 (85)
32 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 4.2E-18 3.1E-22 139.6 5.7 81 149-229 4-84 (89)
33 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 1.4E-17 9.9E-22 131.7 8.5 75 152-227 1-75 (75)
34 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 3.3E-17 2.4E-21 132.4 10.6 79 327-406 5-83 (84)
35 d1fxla2 d.58.7.1 (A:119-203) H 99.7 2.2E-17 1.6E-21 134.0 9.4 77 149-225 5-83 (85)
36 d1whwa_ d.58.7.1 (A:) Probable 99.7 1.4E-17 1E-21 139.3 8.6 83 148-230 6-88 (99)
37 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 2.4E-17 1.7E-21 133.8 9.5 78 149-226 5-84 (85)
38 d2cpha1 d.58.7.1 (A:454-547) P 99.7 2E-17 1.5E-21 136.8 9.2 85 147-231 5-91 (94)
39 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 4.9E-18 3.5E-22 134.8 5.0 76 151-227 1-76 (77)
40 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 2E-17 1.5E-21 134.3 8.8 77 331-407 1-80 (85)
41 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 4.3E-17 3.1E-21 133.9 10.4 81 328-408 5-85 (90)
42 d2cpha1 d.58.7.1 (A:454-547) P 99.7 5.5E-17 4E-21 134.2 10.9 81 327-407 7-89 (94)
43 d2cpza1 d.58.7.1 (A:383-484) C 99.7 2.4E-17 1.7E-21 138.6 8.4 83 148-230 16-98 (102)
44 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 2.6E-17 1.9E-21 132.3 8.2 78 329-406 2-79 (81)
45 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 6.3E-17 4.6E-21 132.3 10.5 78 327-406 7-84 (90)
46 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 3.1E-17 2.3E-21 129.5 8.1 73 330-403 1-73 (75)
47 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 2.4E-17 1.7E-21 139.3 7.9 80 327-406 7-86 (104)
48 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 2.5E-17 1.8E-21 139.2 7.6 80 150-229 8-87 (104)
49 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 1.8E-17 1.3E-21 133.2 6.4 80 150-229 1-80 (81)
50 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 8.7E-17 6.3E-21 128.6 10.2 77 328-405 2-78 (79)
51 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 4.2E-17 3.1E-21 137.3 8.5 79 149-228 9-87 (103)
52 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 3.4E-17 2.5E-21 134.5 7.7 82 148-229 3-84 (90)
53 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 2.2E-17 1.6E-21 130.1 6.2 74 152-226 1-74 (75)
54 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 2.2E-17 1.6E-21 130.1 6.0 74 330-404 1-74 (75)
55 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 6.4E-17 4.7E-21 135.8 9.2 78 327-405 19-96 (103)
56 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 4.3E-17 3.1E-21 136.5 7.8 78 328-406 18-95 (101)
57 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 5.5E-17 4E-21 131.0 8.2 76 331-406 1-77 (83)
58 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 5E-17 3.6E-21 145.1 8.2 80 149-228 41-120 (139)
59 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 5.4E-17 3.9E-21 129.3 7.5 75 152-227 2-76 (78)
60 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 7.6E-17 5.5E-21 130.9 8.3 77 153-229 1-80 (85)
61 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 2.3E-17 1.6E-21 138.2 5.2 77 150-227 18-94 (101)
62 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 9.2E-17 6.7E-21 128.4 8.5 77 150-227 2-78 (79)
63 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 5.6E-17 4.1E-21 139.5 7.6 104 148-256 5-108 (114)
64 d2cq3a1 d.58.7.1 (A:110-202) R 99.7 3.3E-16 2.4E-20 129.2 11.5 79 327-407 10-88 (93)
65 d1x4ba1 d.58.7.1 (A:8-110) Het 99.6 6.2E-17 4.5E-21 135.9 7.1 79 150-229 20-98 (103)
66 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 2.7E-16 2E-20 128.9 10.7 78 328-407 8-85 (90)
67 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 6E-17 4.4E-21 130.8 6.5 77 153-229 1-78 (83)
68 d2msta_ d.58.7.1 (A:) Neural R 99.6 1.2E-16 8.5E-21 126.5 7.8 75 330-405 1-75 (75)
69 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 1.4E-16 1E-20 130.6 8.5 80 148-229 6-85 (90)
70 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.6 2.4E-16 1.7E-20 132.2 10.1 80 148-228 16-95 (101)
71 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.6 2.2E-16 1.6E-20 131.9 8.6 84 146-229 4-93 (98)
72 d2msta_ d.58.7.1 (A:) Neural R 99.6 1.2E-16 8.7E-21 126.4 6.5 75 152-227 1-75 (75)
73 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.6 5.4E-16 3.9E-20 129.5 10.6 80 327-406 7-92 (98)
74 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 1.9E-16 1.4E-20 129.5 7.4 77 328-406 8-84 (89)
75 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 4.3E-16 3.1E-20 128.5 9.2 81 147-229 8-88 (93)
76 d2cpea1 d.58.7.1 (A:353-453) R 99.6 4.7E-16 3.4E-20 130.6 9.2 80 327-406 7-94 (101)
77 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 2.7E-16 2E-20 127.6 7.4 78 328-406 4-83 (86)
78 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.6 1.9E-16 1.4E-20 124.1 6.1 71 153-223 1-71 (72)
79 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 7.7E-16 5.6E-20 132.3 10.4 78 327-407 6-83 (114)
80 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.6 1.6E-16 1.1E-20 124.6 5.4 70 331-400 1-70 (72)
81 d2cpia1 d.58.7.1 (A:101-189) E 99.6 3.4E-16 2.5E-20 127.8 7.6 76 328-403 8-89 (89)
82 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 2.1E-16 1.6E-20 129.2 6.3 79 149-229 7-85 (89)
83 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 1.3E-16 9.4E-21 129.6 5.0 80 149-229 3-84 (86)
84 d1zh5a2 d.58.7.1 (A:105-189) L 99.6 3.9E-16 2.8E-20 126.3 7.4 77 149-227 5-81 (85)
85 d1zh5a2 d.58.7.1 (A:105-189) L 99.6 8.6E-16 6.3E-20 124.2 9.3 77 328-406 6-82 (85)
86 d2cqpa1 d.58.7.1 (A:917-1002) 99.6 4.9E-16 3.6E-20 126.3 7.4 78 328-405 9-86 (86)
87 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 9.3E-16 6.8E-20 127.0 9.1 81 147-230 11-91 (95)
88 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 1.1E-15 7.9E-20 126.6 9.4 78 148-231 16-93 (96)
89 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 1.3E-15 9.7E-20 126.0 9.8 76 327-405 13-88 (95)
90 d2cpea1 d.58.7.1 (A:353-453) R 99.6 5.4E-16 3.9E-20 130.2 7.5 82 148-229 6-95 (101)
91 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.6 7.7E-16 5.6E-20 129.0 8.3 76 328-404 18-93 (101)
92 d3begb1 d.58.7.1 (B:121-207) S 99.6 5.4E-16 4E-20 126.1 7.1 70 329-405 1-70 (87)
93 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.6 2.1E-15 1.5E-19 127.2 10.8 78 327-406 14-92 (104)
94 d2cpxa1 d.58.7.1 (A:291-392) R 99.6 3.7E-16 2.7E-20 131.4 5.9 81 327-407 17-97 (102)
95 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 3.1E-15 2.2E-19 126.0 11.4 80 327-407 14-93 (104)
96 d2cpja1 d.58.7.1 (A:65-150) No 99.6 7.7E-16 5.6E-20 124.8 7.3 79 149-233 7-85 (86)
97 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 2E-15 1.5E-19 125.4 9.4 72 327-406 14-86 (98)
98 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 1.8E-15 1.3E-19 125.3 8.9 73 328-406 18-90 (96)
99 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 3.1E-15 2.2E-19 120.5 10.0 75 327-406 7-82 (83)
100 d1whxa_ d.58.7.1 (A:) Probable 99.6 3E-15 2.2E-19 127.9 10.5 76 327-408 9-84 (111)
101 d2cpxa1 d.58.7.1 (A:291-392) R 99.6 3.1E-16 2.3E-20 131.9 4.0 82 148-229 16-97 (102)
102 d2cpja1 d.58.7.1 (A:65-150) No 99.6 1.9E-15 1.4E-19 122.5 8.3 74 328-407 8-81 (86)
103 d2adca1 d.58.7.1 (A:335-443) P 99.6 3.4E-15 2.4E-19 127.1 10.0 74 329-407 3-77 (109)
104 d2cpya1 d.58.7.1 (A:536-638) R 99.6 5.6E-16 4.1E-20 130.5 4.8 79 328-407 8-86 (103)
105 d1wg4a_ d.58.7.1 (A:) Splicing 99.6 7.2E-15 5.3E-19 122.0 11.6 74 327-407 14-87 (98)
106 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.6 1.5E-16 1.1E-20 130.5 1.1 82 146-229 9-90 (91)
107 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.6 3.8E-16 2.7E-20 128.1 3.5 78 327-406 12-89 (91)
108 d2cpia1 d.58.7.1 (A:101-189) E 99.6 6.6E-16 4.8E-20 126.1 4.9 76 149-224 7-88 (89)
109 d2cpda1 d.58.7.1 (A:223-308) A 99.6 4.5E-15 3.3E-19 120.4 9.9 75 326-406 6-80 (86)
110 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 2.4E-15 1.7E-19 126.7 8.3 81 148-229 13-93 (104)
111 d1weza_ d.58.7.1 (A:) Heteroge 99.6 3.4E-15 2.5E-19 125.2 9.1 78 327-407 14-91 (102)
112 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 2.9E-15 2.1E-19 117.9 7.5 73 151-226 1-73 (75)
113 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 4.2E-15 3.1E-19 119.6 8.6 78 146-228 4-82 (83)
114 d1wg1a_ d.58.7.1 (A:) Probable 99.5 5.5E-15 4E-19 120.2 9.1 73 328-407 5-77 (88)
115 d2cqpa1 d.58.7.1 (A:917-1002) 99.5 1.2E-15 8.7E-20 123.9 5.0 78 149-226 8-85 (86)
116 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 5.4E-15 4E-19 122.6 9.2 81 329-409 2-86 (96)
117 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.5 3E-15 2.2E-19 126.2 7.7 79 149-229 14-93 (104)
118 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 2.5E-15 1.8E-19 120.0 6.6 73 329-407 2-75 (80)
119 d1whxa_ d.58.7.1 (A:) Probable 99.5 2.7E-15 1.9E-19 128.2 7.2 74 149-228 9-82 (111)
120 d3begb1 d.58.7.1 (B:121-207) S 99.5 3.5E-15 2.5E-19 121.3 7.4 70 151-227 1-70 (87)
121 d2ghpa2 d.58.7.1 (A:41-115) U4 99.5 6.7E-15 4.9E-19 115.8 8.8 73 329-404 1-73 (75)
122 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 6.3E-15 4.6E-19 122.2 8.6 93 230-325 1-93 (96)
123 d1fjca_ d.58.7.1 (A:) Nucleoli 99.5 6.5E-15 4.7E-19 122.1 8.6 75 327-406 15-89 (96)
124 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 8E-15 5.8E-19 116.7 8.7 72 327-406 4-75 (79)
125 d2adca2 d.58.7.1 (A:444-531) P 99.5 1.2E-14 8.9E-19 118.3 9.8 76 327-406 9-85 (88)
126 d2adca1 d.58.7.1 (A:335-443) P 99.5 7.7E-15 5.6E-19 124.8 8.8 75 150-229 2-77 (109)
127 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 1.6E-14 1.2E-18 113.6 9.7 70 331-407 1-70 (75)
128 d2adca2 d.58.7.1 (A:444-531) P 99.5 1.1E-14 7.8E-19 118.7 9.0 77 148-228 8-85 (88)
129 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 3E-15 2.2E-19 122.8 5.6 80 149-231 2-85 (91)
130 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 6.2E-15 4.5E-19 120.9 7.6 78 327-407 2-83 (91)
131 d1wela1 d.58.7.1 (A:412-523) R 99.5 4.7E-15 3.4E-19 126.6 7.0 81 325-406 15-95 (112)
132 d1fjca_ d.58.7.1 (A:) Nucleoli 99.5 2.1E-15 1.5E-19 125.1 4.3 80 146-230 12-91 (96)
133 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 4.6E-15 3.3E-19 120.8 6.2 72 327-405 4-75 (88)
134 d2cpda1 d.58.7.1 (A:223-308) A 99.5 9.5E-15 6.9E-19 118.4 8.1 75 149-229 7-81 (86)
135 d1weza_ d.58.7.1 (A:) Heteroge 99.5 4.1E-15 3E-19 124.7 5.8 80 147-229 12-91 (102)
136 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 9.3E-15 6.8E-19 114.9 7.2 74 153-233 1-74 (75)
137 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 9.5E-15 6.9E-19 116.3 7.4 75 147-229 2-76 (79)
138 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 3.3E-15 2.4E-19 119.2 4.6 74 151-230 2-76 (80)
139 d1wg1a_ d.58.7.1 (A:) Probable 99.5 3.7E-15 2.7E-19 121.3 4.9 79 149-234 4-82 (88)
140 d1whya_ d.58.7.1 (A:) Putative 99.5 1.8E-14 1.3E-18 119.5 9.0 73 327-405 16-90 (97)
141 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 1.7E-14 1.2E-18 119.7 8.5 72 148-226 13-84 (98)
142 d2adba1 d.58.7.1 (A:177-284) P 99.5 2.5E-14 1.8E-18 121.2 9.4 75 327-405 6-82 (108)
143 d1wexa_ d.58.7.1 (A:) Heteroge 99.5 7.4E-14 5.4E-18 117.3 12.2 77 326-408 13-91 (104)
144 d2cpya1 d.58.7.1 (A:536-638) R 99.5 3.4E-15 2.5E-19 125.6 3.7 78 149-227 7-84 (103)
145 d1whya_ d.58.7.1 (A:) Putative 99.5 2.7E-14 2E-18 118.4 8.9 76 148-229 15-92 (97)
146 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 9.6E-15 7E-19 121.2 5.7 73 149-229 14-87 (98)
147 d2adba1 d.58.7.1 (A:177-284) P 99.5 2.2E-14 1.6E-18 121.6 7.8 76 149-228 6-83 (108)
148 d1wela1 d.58.7.1 (A:412-523) R 99.5 5.4E-15 3.9E-19 126.2 3.5 79 148-227 16-94 (112)
149 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 8.2E-15 6E-19 119.3 4.2 75 148-229 3-77 (88)
150 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.5 2.3E-14 1.7E-18 119.2 6.0 81 147-233 15-98 (99)
151 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 1.1E-13 8.1E-18 112.5 9.9 75 326-406 6-82 (88)
152 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 5.6E-14 4.1E-18 114.3 7.8 78 146-229 4-83 (88)
153 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 9.9E-14 7.2E-18 116.5 9.3 79 145-229 10-90 (104)
154 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 1.2E-13 8.9E-18 114.7 9.1 76 327-408 17-95 (99)
155 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 5.3E-14 3.9E-18 114.4 6.2 82 146-233 4-88 (89)
156 d1u2fa_ d.58.7.1 (A:) Splicing 99.4 4.8E-15 3.5E-19 121.4 -0.6 77 151-228 2-83 (90)
157 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 3.2E-13 2.3E-17 109.7 9.1 76 326-407 6-84 (89)
158 d1u2fa_ d.58.7.1 (A:) Splicing 99.4 5.5E-15 4E-19 121.0 -2.7 74 329-403 2-80 (90)
159 d1weya_ d.58.7.1 (A:) Calcipre 99.4 3E-13 2.2E-17 113.2 7.6 76 327-408 4-84 (104)
160 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=4.1e-26 Score=215.69 Aligned_cols=159 Identities=26% Similarity=0.423 Sum_probs=138.6
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCC----
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTA---- 225 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~---- 225 (650)
.++|||+|||+++|+++|+++|++||.|.+|.++++..++.++|+|||+|.+.++|.+|+..+ +..+..+.+.+.
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~-~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR-PHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC-SCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhc-CCcccccchhhhhhhh
Confidence 479999999999999999999999999999999999999999999999999999999999864 445555444322
Q ss_pred --------CCCCCCcceeCCcCCCccHHHHHHHHhhcCCcceEEEEEeccccccCCCcceEEEEecCHHHHHHHHHHhCC
Q 006327 226 --------PSEDNDTLFVGNICNTWTKEAIKQKLKDYGVEGVENINLVSDIQHEGLSRGFAFVMFSCHVDAMAAYKRLQK 297 (650)
Q Consensus 226 --------~~~~~~~l~v~nLp~~~te~~l~~~F~~~G~~~i~~i~i~~d~~~~g~srG~aFV~F~~~e~A~~A~~~l~~ 297 (650)
.....++|||+|||+.+|+++|+++|..||. |..+.|+.+. .++.++|||||+|.+.++|.+|++ +++
T Consensus 85 ~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~--v~~~~i~~~~-~~~~~~g~~fV~f~~~e~A~~Al~-~~~ 160 (183)
T d1u1qa_ 85 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK--IEVIEIMTDR-GSGKKRGFAFVTFDDHDSVDKIVI-QKY 160 (183)
T ss_dssp TTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSC--EEEEEEEECT-TTCCEEEEEEEEESCHHHHHHHHT-SSC
T ss_pred cccccccccccccceeEEccCCCcCCHHHHhhhhccCCc--eeeeeeeccc-ccCccceeEEEEECCHHHHHHHHH-hCC
Confidence 2234689999999999999999999999999 9999999874 478999999999999999999997 666
Q ss_pred CCeeeCCCCcceeecccCCC
Q 006327 298 PDVVFGHPERTVKVAFAEPL 317 (650)
Q Consensus 298 ~~~~~g~~~~~l~v~~a~~~ 317 (650)
..+ .++.|.|.+|.++
T Consensus 161 ~~~----~G~~i~V~~A~~k 176 (183)
T d1u1qa_ 161 HTV----NGHNCEVRKALSK 176 (183)
T ss_dssp EEE----TTEEEEEEECCCH
T ss_pred CeE----CCEEEEEEecCCc
Confidence 555 4899999988764
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=1.4e-25 Score=211.93 Aligned_cols=166 Identities=22% Similarity=0.409 Sum_probs=140.7
Q ss_pred CcceeCCcCCCccHHHHHHHHhhcCCcceEEEEEeccccccCCCcceEEEEecCHHHHHHHHHHhCCCCeeeCCCCccee
Q 006327 231 DTLFVGNICNTWTKEAIKQKLKDYGVEGVENINLVSDIQHEGLSRGFAFVMFSCHVDAMAAYKRLQKPDVVFGHPERTVK 310 (650)
Q Consensus 231 ~~l~v~nLp~~~te~~l~~~F~~~G~~~i~~i~i~~d~~~~g~srG~aFV~F~~~e~A~~A~~~l~~~~~~~g~~~~~l~ 310 (650)
++|||+|||+.+|+++|+++|+++|. |..+.++++. .++.++|+|||+|.+.++|.+|+..++. .+ ..+.+.
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~~G~--v~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~~~~-~~----~~~~~~ 78 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQWGT--LTDCVVMRDP-NTKRSRGFGFVTYATVEEVDAAMNARPH-KV----DGRVVE 78 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGGGSC--EEEEEEEECT-TTCCEEEEEEEEESSHHHHHHHHHTCSC-EE----TTEECE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHcCC--EEEEEeeecc-cCCCccCceecccCCHHHHHHHHHhcCC-cc----cccchh
Confidence 68999999999999999999999999 9999999885 4889999999999999999999985443 33 244455
Q ss_pred ecccCCCCC-CCccccccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHH
Q 006327 311 VAFAEPLRE-PDPEIMAHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINA 389 (650)
Q Consensus 311 v~~a~~~~~-~~~~~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~ 389 (650)
+....+... .........++|||+|||+.+|+++|+++|+.||.|..|.|+.+..++.++|||||+|.+.++|.+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~- 157 (183)
T d1u1qa_ 79 PKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI- 157 (183)
T ss_dssp EEECCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-
T ss_pred hhhhhhcccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-
Confidence 444433221 122233456799999999999999999999999999999999999999999999999999999999997
Q ss_pred hCCCeeCCCeeEEEEe
Q 006327 390 INNKEFSDGNSKVKLR 405 (650)
Q Consensus 390 lng~~~~g~~i~v~~~ 405 (650)
+++..|.|+.|.|.++
T Consensus 158 ~~~~~~~G~~i~V~~A 173 (183)
T d1u1qa_ 158 QKYHTVNGHNCEVRKA 173 (183)
T ss_dssp SSCEEETTEEEEEEEC
T ss_pred hCCCeECCEEEEEEec
Confidence 7999999999888765
No 3
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.1e-18 Score=140.20 Aligned_cols=81 Identities=16% Similarity=0.272 Sum_probs=77.6
Q ss_pred ccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 326 AHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 326 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
..+++|||+|||+.+|+++|+++|++||.|..|.|+.++.++.++|||||+|.+.++|..||+.|||..|.|+.|+|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 85 ~ 85 (93)
T d1h2vz_ 85 A 85 (93)
T ss_dssp S
T ss_pred C
Confidence 4
No 4
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=7e-18 Score=141.26 Aligned_cols=81 Identities=17% Similarity=0.255 Sum_probs=76.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+.+|+++|+++|++||.|..|.|+++..+++++|||||+|.+.++|.+||+.||+..|.|+.|+|.++.
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 87 ~ 87 (99)
T d1whwa_ 87 I 87 (99)
T ss_dssp C
T ss_pred C
Confidence 4
No 5
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.73 E-value=5.6e-18 Score=138.47 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=76.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
...+|||+|||..+|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|++||..|||..|.|+.|.|.++.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 86 ~ 86 (88)
T d1rk8a_ 86 V 86 (88)
T ss_dssp E
T ss_pred C
Confidence 3
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.73 E-value=4.1e-18 Score=137.51 Aligned_cols=77 Identities=16% Similarity=0.329 Sum_probs=74.8
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
++|||+|||..+|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|++||+.|||..|.|+.|+|.++
T Consensus 3 t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a 79 (82)
T d1b7fa1 3 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYA 79 (82)
T ss_dssp SEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999886
No 7
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4.1e-18 Score=140.75 Aligned_cols=83 Identities=24% Similarity=0.483 Sum_probs=78.6
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...++|||+|||+++|+++|+++|++||.|.+|+|++++.|+.++|||||+|.+.++|.+|++.|++..|.|+.|+|.++
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 006327 228 EDN 230 (650)
Q Consensus 228 ~~~ 230 (650)
...
T Consensus 87 ~~~ 89 (93)
T d1x5ua1 87 SAH 89 (93)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 8
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=4.6e-18 Score=140.43 Aligned_cols=82 Identities=17% Similarity=0.355 Sum_probs=77.9
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
.+.++||||+|||+++|+++|+++|++||+|++|.|++++.++.++|||||+|.+.++|..|++.||+..|.|+.|.|.+
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CC
Q 006327 227 SE 228 (650)
Q Consensus 227 ~~ 228 (650)
+.
T Consensus 84 a~ 85 (93)
T d1h2vz_ 84 DA 85 (93)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 9
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.72 E-value=2.9e-18 Score=138.41 Aligned_cols=80 Identities=23% Similarity=0.451 Sum_probs=76.5
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.++|||+|||+++|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|++||+.||+..|.|+.|+|.++.+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999987754
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=5.3e-18 Score=135.96 Aligned_cols=77 Identities=14% Similarity=0.360 Sum_probs=74.6
Q ss_pred eeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 330 TVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 330 ~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
+|||+|||+.+|+++|+++|++||.|..|+|++++.+++++|||||+|.++++|..||+.|||..|.|+.|+|.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999998864
No 11
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1e-17 Score=141.19 Aligned_cols=83 Identities=23% Similarity=0.430 Sum_probs=75.7
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+.+|+++|+++|++||.|..|.|+++..|++++|||||+|.+.++|.+||+.+|+ .|.|+.|.|.++.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 346899999999999999999999999999999999999999999999999999999999998876 7999999998775
Q ss_pred ccCC
Q 006327 407 RLSN 410 (650)
Q Consensus 407 ~~~~ 410 (650)
...+
T Consensus 88 ~~~~ 91 (103)
T d2cqda1 88 LGAK 91 (103)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 5433
No 12
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.1e-17 Score=135.00 Aligned_cols=78 Identities=19% Similarity=0.376 Sum_probs=74.9
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
++|||+|||..+++++|+++|++||.|..|.|+++..++.++|||||+|.+.++|++|++.|||..|.|+.|+|.++.
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999998863
No 13
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.3e-18 Score=136.71 Aligned_cols=79 Identities=18% Similarity=0.414 Sum_probs=75.8
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
.+|||+|||+.+|+++|+++|++||.|..|.|++++.|+.++|||||+|.++++|..|++.|||..|.|+.|.|.++..
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999988743
No 14
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.2e-17 Score=134.88 Aligned_cols=76 Identities=14% Similarity=0.267 Sum_probs=73.0
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEE
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKV 402 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v 402 (650)
+.++|||+|||..+|+++|+++|++||.|..|.|++++.+++++|||||+|.+.++|.+||..|||..|.|+.|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999998876
No 15
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=5.7e-18 Score=135.78 Aligned_cols=77 Identities=31% Similarity=0.535 Sum_probs=74.5
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
+|||+|||+++|+++|+++|++||+|.+|+|++++.|++++|||||+|.+.++|.+|++.|++..|.|+.|+|.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999988764
No 16
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.8e-18 Score=139.56 Aligned_cols=84 Identities=21% Similarity=0.356 Sum_probs=79.1
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
....++|||+|||.++|+++|+++|++||.|..|+|+.++.++.++|||||+|.+.++|.+|++.|++..|.|+.|.|.+
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ 84 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 84 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCC
Q 006327 227 SEDN 230 (650)
Q Consensus 227 ~~~~ 230 (650)
+.+.
T Consensus 85 akp~ 88 (90)
T d2cq0a1 85 AKPS 88 (90)
T ss_dssp SSCC
T ss_pred eeCC
Confidence 7654
No 17
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=6.5e-18 Score=138.04 Aligned_cols=82 Identities=20% Similarity=0.343 Sum_probs=76.8
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
..+.++|||+|||.++|+++|+++|++||.|.+|+|++++.|++++|||||+|.+.++|.+|+..||+..|.|+.|.|.+
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CC
Q 006327 227 SE 228 (650)
Q Consensus 227 ~~ 228 (650)
+.
T Consensus 84 a~ 85 (88)
T d1rk8a_ 84 CF 85 (88)
T ss_dssp SE
T ss_pred ec
Confidence 64
No 18
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1e-17 Score=135.20 Aligned_cols=80 Identities=23% Similarity=0.427 Sum_probs=76.1
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.++|||+|||+++|+++|+++|++||.|..|+|+++..+++++|||||+|.+.++|++|++.|++..|.|+.|.|.++.+
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999887764
No 19
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.2e-17 Score=137.82 Aligned_cols=80 Identities=19% Similarity=0.326 Sum_probs=76.3
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
.++|||+|||..+|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|.+||+.|||..|.|+.|+|.++..
T Consensus 9 ~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 9 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999987643
No 20
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.71 E-value=1.7e-17 Score=148.10 Aligned_cols=79 Identities=23% Similarity=0.446 Sum_probs=75.9
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
.++|||+|||+++|+++|+++|++||.|..|.|++++.|++++|||||+|.+.++|..||+.|||..|.|+.|+|.++.
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999998864
No 21
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.5e-17 Score=132.55 Aligned_cols=76 Identities=8% Similarity=0.204 Sum_probs=72.8
Q ss_pred eeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 330 TVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 330 ~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
+|||+|||+.+|+++|+++|++||.|..|.|+.+. +++++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 69999999999999999999999999999999885 78999999999999999999999999999999999999874
No 22
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.8e-18 Score=136.15 Aligned_cols=78 Identities=26% Similarity=0.515 Sum_probs=73.5
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
..++|||+|||+++|+++|+++|++||.|..|.|++++.|++++|||||+|.+.++|.+||+ +++..|.|+.|.|..+
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 45799999999999999999999999999999999999999999999999999999999998 6889999999988665
No 23
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2e-17 Score=134.13 Aligned_cols=77 Identities=21% Similarity=0.401 Sum_probs=72.2
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCe--eEEEE
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGN--SKVKL 404 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~--i~v~~ 404 (650)
.++|||+|||..+|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|.+|++.|||..+.|+. |.|.|
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 468999999999999999999999999999999999999999999999999999999999999999999855 66655
No 24
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.7e-17 Score=136.27 Aligned_cols=80 Identities=20% Similarity=0.381 Sum_probs=76.3
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||..+|+++|+++|++||.|..|.|+.+..++.++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999998864
No 25
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=5.8e-18 Score=136.85 Aligned_cols=77 Identities=27% Similarity=0.434 Sum_probs=73.2
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGT 224 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v 224 (650)
.++++|||+|||+.+|+++|+++|++||.|.+|.|++++.+++++|||||+|.+.++|.+|+++|++..|.|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999998764
No 26
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.71 E-value=2.1e-17 Score=134.18 Aligned_cols=78 Identities=19% Similarity=0.375 Sum_probs=73.5
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCC--CeeEEEEe
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSD--GNSKVKLR 405 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g--~~i~v~~~ 405 (650)
.++|||+|||+.+|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|.+||+.|||..+.| ++|.|.++
T Consensus 6 ~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 6 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999987 77888764
No 27
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2e-17 Score=139.01 Aligned_cols=81 Identities=19% Similarity=0.355 Sum_probs=76.6
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+++++++|+++|++||.|..|.++.+..++.++|||||+|.+.++|..||+.|||..|.|+.|+|.++.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 97 ~ 97 (102)
T d2cpza1 97 S 97 (102)
T ss_dssp C
T ss_pred C
Confidence 3
No 28
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=8.8e-18 Score=137.64 Aligned_cols=80 Identities=20% Similarity=0.449 Sum_probs=76.2
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+++|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|.+||+.||+..|.|+.|.|.++.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999998763
No 29
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.1e-17 Score=136.98 Aligned_cols=82 Identities=26% Similarity=0.574 Sum_probs=74.9
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTA 225 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~ 225 (650)
..+..++|||+|||+++|+++|+++|++||.|..|+|++++.||+++|||||+|.+.++|.+||+.+ ..|.|+.|.|.
T Consensus 4 ~~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~ 81 (90)
T d2cqga1 4 AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCK 81 (90)
T ss_dssp CCCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEE
T ss_pred CCcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999999854 47899999887
Q ss_pred CCCC
Q 006327 226 PSED 229 (650)
Q Consensus 226 ~~~~ 229 (650)
.+..
T Consensus 82 ~a~~ 85 (90)
T d2cqga1 82 LPNS 85 (90)
T ss_dssp CCCT
T ss_pred eCCC
Confidence 7654
No 30
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=5.8e-18 Score=134.37 Aligned_cols=76 Identities=16% Similarity=0.364 Sum_probs=72.5
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
++|||+|||+++|+++|+++|++||.|..|.|++++.|++++|||||+|.+.++|.+||+ +|++.|+|+.|.|.++
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999997 7999999999888764
No 31
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=8.9e-18 Score=136.21 Aligned_cols=79 Identities=23% Similarity=0.433 Sum_probs=75.8
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.+|||+|||+.+|+++|+++|++||+|+.|+|++++.||.++|||||+|.+.++|.+|++.|++..|.|+.|.|.++..
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999988764
No 32
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4.2e-18 Score=139.59 Aligned_cols=81 Identities=20% Similarity=0.521 Sum_probs=77.5
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..+||||+|||+++|+++|+++|++||+|.+|+|+.++.++.++|||||+|.+.++|.+|++.|++..|.|+.|.|.++.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q 006327 229 D 229 (650)
Q Consensus 229 ~ 229 (650)
+
T Consensus 84 p 84 (89)
T d2cqba1 84 P 84 (89)
T ss_dssp C
T ss_pred C
Confidence 4
No 33
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.4e-17 Score=131.66 Aligned_cols=75 Identities=31% Similarity=0.605 Sum_probs=70.9
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
+|||+|||+++|+++|+++|++||+|..|.|++++.|++++|||||+|.+.++|++||+ +++..|.|+.|.|..+
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 49999999999999999999999999999999999999999999999999999999997 7888999999987653
No 34
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.3e-17 Score=132.41 Aligned_cols=79 Identities=18% Similarity=0.410 Sum_probs=74.0
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+.+|+++|+++|++||.|..|.|+++..++.++|||||+|.+.++|.+||+ +++..|.|+.|+|..++
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 34789999999999999999999999999999999999999999999999999999999996 79999999998887653
No 35
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.2e-17 Score=133.96 Aligned_cols=77 Identities=19% Similarity=0.475 Sum_probs=71.5
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCc--CCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKR--CGTA 225 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~--i~v~ 225 (650)
..++|||+|||+++|+++|+++|++||+|.+|+|++++.+++++|||||+|.+.++|.+|++.||+..+.|+. |.|.
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 4578999999999999999999999999999999999999999999999999999999999999999998854 5544
No 36
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=1.4e-17 Score=139.31 Aligned_cols=83 Identities=29% Similarity=0.462 Sum_probs=78.1
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...++|||+|||+++|+++|+++|++||.|..|+|+.++.|++++|||||+|.+.++|.+||+.||+..|.|+.|.|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCC
Q 006327 228 EDN 230 (650)
Q Consensus 228 ~~~ 230 (650)
...
T Consensus 86 ~~~ 88 (99)
T d1whwa_ 86 TIK 88 (99)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 37
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.69 E-value=2.4e-17 Score=133.83 Aligned_cols=78 Identities=22% Similarity=0.503 Sum_probs=72.6
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccC--CcCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICG--KRCGTAP 226 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g--~~i~v~~ 226 (650)
..++|||+|||+++|+++|+++|++||.|..|+|++++.+++++|||||+|.+.++|.+|++.||+..+.| ++|.|.+
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999998876 6676654
No 38
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2e-17 Score=136.82 Aligned_cols=85 Identities=26% Similarity=0.500 Sum_probs=77.5
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecC-CCCCCcceEEEEEeCHHHHHHHHHhc-cCCcccCCcCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNF-STNRNKGYAFVKFANKEHAKRALTEM-KNPVICGKRCGT 224 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~-~tg~~~G~afV~F~~~e~A~~Al~~l-~~~~l~g~~i~v 224 (650)
....++|||+|||+++|+++|+++|++||.|..|+|+++. .+|+++|||||+|.+.++|.+||+.| ++..|.|++|.|
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 3467899999999999999999999999999999998875 47999999999999999999999998 889999999999
Q ss_pred CCCCCCC
Q 006327 225 APSEDND 231 (650)
Q Consensus 225 ~~~~~~~ 231 (650)
.++....
T Consensus 85 ~~A~~~~ 91 (94)
T d2cpha1 85 EWADSEV 91 (94)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 8887543
No 39
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=4.9e-18 Score=134.80 Aligned_cols=76 Identities=29% Similarity=0.509 Sum_probs=71.7
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
++|||+|||+++|+++|+++|++||.|++|+|++++.|++++|||||+|.+.++|++||+ ++++.|.|+.|.|..+
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 589999999999999999999999999999999999999999999999999999999997 6999999999887543
No 40
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2e-17 Score=134.30 Aligned_cols=77 Identities=13% Similarity=0.343 Sum_probs=71.4
Q ss_pred eeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCC---CcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 331 VFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTA---KRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 331 l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~---~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
|||+|||+++|+++|+++|++||.|..|.|++++.++ .++|||||+|.+.++|.+||+.|||..|.|+.|.|.++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999999887665 4699999999999999999999999999999999987643
No 41
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=4.3e-17 Score=133.87 Aligned_cols=81 Identities=19% Similarity=0.419 Sum_probs=76.7
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
..+|||+|||+.+|+++|+++|++||.|..|.++++..++.++|||||+|.++++|..||..|||..|.|+.|+|.++..
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~ 84 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEEC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred c
Q 006327 408 L 408 (650)
Q Consensus 408 ~ 408 (650)
.
T Consensus 85 ~ 85 (90)
T d1x5sa1 85 S 85 (90)
T ss_dssp C
T ss_pred C
Confidence 3
No 42
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=5.5e-17 Score=134.17 Aligned_cols=81 Identities=19% Similarity=0.436 Sum_probs=75.4
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecC-CCCCcccEEEEEeCCHHHHHHHHHHh-CCCeeCCCeeEEEE
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNM-STAKRKDYGFIDFSTHEAAVACINAI-NNKEFSDGNSKVKL 404 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~-~~~~~~G~afV~F~~~~~A~~Ai~~l-ng~~~~g~~i~v~~ 404 (650)
..++|||+|||+.+++++|+++|++||.|..|.|+++. .+|.++|||||+|.+.++|.+||..| |+..|.|+.|.|.+
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 45789999999999999999999999999999999875 47899999999999999999999998 89999999999998
Q ss_pred eec
Q 006327 405 RAR 407 (650)
Q Consensus 405 ~~~ 407 (650)
+..
T Consensus 87 A~~ 89 (94)
T d2cpha1 87 ADS 89 (94)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 43
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.4e-17 Score=138.60 Aligned_cols=83 Identities=23% Similarity=0.336 Sum_probs=78.4
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.+.++|||+|||+++|+++|+++|++||.|..|.++.++.++.++|||||+|.+.++|..||+.||+..|.|+.|.|.++
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 006327 228 EDN 230 (650)
Q Consensus 228 ~~~ 230 (650)
...
T Consensus 96 ~~k 98 (102)
T d2cpza1 96 RSK 98 (102)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 44
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.68 E-value=2.6e-17 Score=132.30 Aligned_cols=78 Identities=18% Similarity=0.379 Sum_probs=68.0
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
++|||+|||+++|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+||+.|||..|.|+.|.|.++.
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~ 79 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSN 79 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcc
Confidence 689999999999999999999999999999998888899999999999999999999999999999999999998763
No 45
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=6.3e-17 Score=132.34 Aligned_cols=78 Identities=18% Similarity=0.420 Sum_probs=71.7
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+++|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|.+||+. +..|+|+.|.|.++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCC
Confidence 457899999999999999999999999999999999999999999999999999999999974 458999988887653
No 46
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.1e-17 Score=129.55 Aligned_cols=73 Identities=16% Similarity=0.381 Sum_probs=69.7
Q ss_pred eeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEE
Q 006327 330 TVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVK 403 (650)
Q Consensus 330 ~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~ 403 (650)
+|||+|||+++|+++|+++|++||.|..|.|++++.+++++|||||+|.+.++|++||+ +++..|.|+.|.|.
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~ 73 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPK 73 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEEC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEee
Confidence 58999999999999999999999999999999999999999999999999999999997 89999999998764
No 47
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.4e-17 Score=139.35 Aligned_cols=80 Identities=29% Similarity=0.530 Sum_probs=76.0
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+++|+++|+++|++||.|..|.|++++.+++++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999998753
No 48
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.5e-17 Score=139.23 Aligned_cols=80 Identities=24% Similarity=0.524 Sum_probs=75.9
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.+||||+|||+++|+++|+++|++||+|.+|+|+.++.|++++|||||+|.+.++|.+|++.|++..|.|+.|.|.++..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999998877653
No 49
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=1.8e-17 Score=133.22 Aligned_cols=80 Identities=19% Similarity=0.277 Sum_probs=68.8
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.+||||+|||+++|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+|++.||+..+.|++|.|..+.+
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 47999999999999999999999999999998888888899999999999999999999999999999999999877653
No 50
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=8.7e-17 Score=128.55 Aligned_cols=77 Identities=21% Similarity=0.465 Sum_probs=72.7
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
.++|||+|||+++|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+|++ |||..|.|+.|+|..+
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 4799999999999999999999999999999999999999999999999999999999985 8999999999888754
No 51
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.2e-17 Score=137.31 Aligned_cols=79 Identities=29% Similarity=0.529 Sum_probs=73.4
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..++|||+|||+.+|+++|+++|++||.|.+|+|++++.|++++|||||+|.+.++|.+||+.+++ .|.|+.|.|.++.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 457899999999999999999999999999999999999999999999999999999999998875 7999999886654
No 52
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.4e-17 Score=134.51 Aligned_cols=82 Identities=29% Similarity=0.581 Sum_probs=76.9
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.+.++|||+|||+++|+++|+++|++||.|..|.++.+..++.++|||||+|.+.++|.+|+..|++..|.|+.|.|.++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 35788999999999999999999999999999999999899999999999999999999999999999999999998766
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 83 ~~ 84 (90)
T d1x5sa1 83 GK 84 (90)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 53
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.2e-17 Score=130.10 Aligned_cols=74 Identities=30% Similarity=0.589 Sum_probs=69.1
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
+|||+|||+++|+++|+++|++||.|..|+|++++.|++++|||||+|.+.++|++||+ +++..|.|+.|.|..
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~ 74 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKV 74 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEEC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEE
Confidence 59999999999999999999999999999999999999999999999999999999997 477789999887654
No 54
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.2e-17 Score=130.11 Aligned_cols=74 Identities=26% Similarity=0.502 Sum_probs=69.7
Q ss_pred eeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEE
Q 006327 330 TVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKL 404 (650)
Q Consensus 330 ~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~ 404 (650)
+|||+|||+++|+++|+++|++||.|..|.|+.++.+++++|||||+|.+.++|.+||+ +++..|+|+.|.|.+
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~ 74 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKV 74 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEEC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEE
Confidence 59999999999999999999999999999999999999999999999999999999996 577899999987764
No 55
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=6.4e-17 Score=135.79 Aligned_cols=78 Identities=17% Similarity=0.376 Sum_probs=72.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
..++|||+|||+++|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|.+||+ +|+..|.|+.|.|.++
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a 96 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRA 96 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEEC
Confidence 34789999999999999999999999999999999999999999999999999999999995 8999999999888654
No 56
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=4.3e-17 Score=136.45 Aligned_cols=78 Identities=13% Similarity=0.260 Sum_probs=74.0
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
.++|||+|||+.+|+++|+++|++||.|..|.|+++..+++++|||||+|.+.++|.+||. |||..|.|+.|.|.++.
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 4689999999999999999999999999999999999999999999999999999999995 99999999999988753
No 57
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=5.5e-17 Score=131.04 Aligned_cols=76 Identities=24% Similarity=0.485 Sum_probs=71.7
Q ss_pred eeecCCCCCCCHHHHHHHhcccCCeeEE-EEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 331 VFLDGVPPHWKENQIRDQIKGYGDVIRI-VLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 331 l~V~nLp~~~t~~~l~~~F~~~G~i~~v-~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
|||+|||+++|+++|+++|++||.|..+ .|+++..+++++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~ 77 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAF 77 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEec
Confidence 7999999999999999999999999764 788999999999999999999999999999999999999999998864
No 58
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.66 E-value=5e-17 Score=145.08 Aligned_cols=80 Identities=24% Similarity=0.413 Sum_probs=76.3
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..++|||+|||+++|+++|+++|++||.|++|.|++++.|++++|||||+|.+.++|.+||+.||+..|.|+.|.|..+.
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999987764
No 59
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=5.4e-17 Score=129.26 Aligned_cols=75 Identities=20% Similarity=0.375 Sum_probs=70.9
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
+|||+|||+++|+++|+++|++||.|..|+|+.++ +++++|||||+|.+.++|.+|++.||+..|.|++|.|..+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a 76 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 76 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 69999999999999999999999999999999885 7999999999999999999999999999999999987654
No 60
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=7.6e-17 Score=130.85 Aligned_cols=77 Identities=25% Similarity=0.500 Sum_probs=71.9
Q ss_pred EEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCC---CCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 153 IFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTN---RNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 153 lfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg---~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
|||+|||+++|+++|+++|++||.|++|.|++++.++ .++|||||+|.+.++|.+|++.||+..|.|+.|.|.++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999999999987765 4689999999999999999999999999999999988754
No 61
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.3e-17 Score=138.18 Aligned_cols=77 Identities=22% Similarity=0.371 Sum_probs=72.8
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.+||||+|||+++|+++|+++|+.||.|.+|+|+++..||+++|||||+|.+.++|.+||+ |++..|.|+.|.|..+
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQAS 94 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEEC
Confidence 3699999999999999999999999999999999999999999999999999999999995 9999999999887654
No 62
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=9.2e-17 Score=128.42 Aligned_cols=77 Identities=22% Similarity=0.582 Sum_probs=72.6
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
-++|||+|||+++|+++|+++|++||.|..+.++.++.++.++|||||+|.+.++|.+|++ +++..|.|+.|.|..+
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 4799999999999999999999999999999999999999999999999999999999996 8999999999987654
No 63
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=5.6e-17 Score=139.53 Aligned_cols=104 Identities=18% Similarity=0.318 Sum_probs=88.1
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
..+++|||+|||+++|+++|.++|++||.|++|+|..+ +.++|||||+|.+.++|.+|++.||+..|.|+.|.|..+
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 35789999999999999999999999999999999754 677999999999999999999999999999999999876
Q ss_pred CCCCcceeCCcCCCccHHHHHHHHhhcCC
Q 006327 228 EDNDTLFVGNICNTWTKEAIKQKLKDYGV 256 (650)
Q Consensus 228 ~~~~~l~v~nLp~~~te~~l~~~F~~~G~ 256 (650)
.... ....+.....++.+..+.+.+|.
T Consensus 82 ~~~~--~~~~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 82 NANR--AFQKMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp CHHH--HTTTSCHHHHHHHHHHHHHHHCC
T ss_pred CCCc--hhhhhHHHHHHHHHHHHHHHhCC
Confidence 5322 12334444567888888888884
No 64
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.3e-16 Score=129.20 Aligned_cols=79 Identities=14% Similarity=0.334 Sum_probs=72.8
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+.+++++|+++|++||.|..|.|+.+.. .++|||||+|.+.++|.+||..||+..|.|+.|+|.++.
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 457899999999999999999999999999999998854 378999999999999999999999999999999998874
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 88 ~ 88 (93)
T d2cq3a1 88 A 88 (93)
T ss_dssp S
T ss_pred c
Confidence 3
No 65
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=6.2e-17 Score=135.89 Aligned_cols=79 Identities=23% Similarity=0.490 Sum_probs=74.0
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
.++|||+|||+++|+++|+++|++||.|..|.|++++.++.++|||||+|.+.++|.+||+ +++..|.|+.|.|.++..
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 3689999999999999999999999999999999999999999999999999999999996 788899999998877653
No 66
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.7e-16 Score=128.88 Aligned_cols=78 Identities=18% Similarity=0.310 Sum_probs=72.3
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
.++|||+|||..+|+++|+++|++||.|..|.|+.+..+ .+|||||+|.+.++|..|+..|||..|.|+.|+|.++..
T Consensus 8 ~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 468999999999999999999999999999999998655 478999999999999999999999999999999988743
No 67
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=6e-17 Score=130.80 Aligned_cols=77 Identities=25% Similarity=0.517 Sum_probs=72.1
Q ss_pred EEEcCCCcCCCHHHHHHHHhccCCeEE-EEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCC
Q 006327 153 IFIGGLDRDATQEDVRKVFERIGEVIE-VRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSED 229 (650)
Q Consensus 153 lfV~nLp~~~teedL~~~F~~~G~V~~-v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~ 229 (650)
|||+|||+++|+++|+++|++||.|.. ++|++++.+++++|||||+|.+.++|.+||+.|++..|.|++|.|.++..
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~ 78 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 78 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecC
Confidence 899999999999999999999999866 47888989999999999999999999999999999999999999887754
No 68
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1.2e-16 Score=126.47 Aligned_cols=75 Identities=16% Similarity=0.373 Sum_probs=71.5
Q ss_pred eeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 330 TVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 330 ~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
+|||+|||+++|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+|++ |||+.|.|+.|+|..+
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999996 9999999999998753
No 69
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.4e-16 Score=130.60 Aligned_cols=80 Identities=25% Similarity=0.448 Sum_probs=73.6
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...+||||+|||.++|+++|+++|++||+|..|+|+.+..++ ++||||+|.+.++|.+|++.|++..|.|+.|+|.++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 457899999999999999999999999999999999886554 799999999999999999999999999999998877
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 84 ~~ 85 (90)
T d2cqia1 84 TT 85 (90)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 70
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.4e-16 Score=132.17 Aligned_cols=80 Identities=18% Similarity=0.425 Sum_probs=74.8
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...++|||+|||+++|+++|+++|++||.|..+.++.+ .++.++|||||+|.+.++|.+|++.||+..|.|+++.|.++
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 35689999999999999999999999999999999887 57899999999999999999999999999999999998776
Q ss_pred C
Q 006327 228 E 228 (650)
Q Consensus 228 ~ 228 (650)
.
T Consensus 95 ~ 95 (101)
T d1x5oa1 95 E 95 (101)
T ss_dssp S
T ss_pred C
Confidence 5
No 71
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=2.2e-16 Score=131.89 Aligned_cols=84 Identities=23% Similarity=0.398 Sum_probs=75.9
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhcc------CCcccC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMK------NPVICG 219 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~------~~~l~g 219 (650)
...+.++|||+|||+++|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+||+.|+ +..|.|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 34567899999999999999999999999999999999999999999999999999999999999886 456788
Q ss_pred CcCCCCCCCC
Q 006327 220 KRCGTAPSED 229 (650)
Q Consensus 220 ~~i~v~~~~~ 229 (650)
+.|.|.++..
T Consensus 84 r~l~v~~a~~ 93 (98)
T d1x4ha1 84 RQLKVDLAVT 93 (98)
T ss_dssp CEEEEECCCC
T ss_pred EEEEEEECCC
Confidence 8888877654
No 72
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=1.2e-16 Score=126.39 Aligned_cols=75 Identities=31% Similarity=0.533 Sum_probs=71.0
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
+|||+|||+++|+++|+++|++||.|..+.++.++.++.+++||||+|.+.++|.+||+ |++..|.|+.|.|..+
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999997 9999999999987643
No 73
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=5.4e-16 Score=129.46 Aligned_cols=80 Identities=25% Similarity=0.392 Sum_probs=74.3
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhC------CCeeCCCee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAIN------NKEFSDGNS 400 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~ln------g~~~~g~~i 400 (650)
..++|||+|||+.+|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+||+.|| |..|.|+.|
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l 86 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQL 86 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEE
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEE
Confidence 45789999999999999999999999999999999999999999999999999999999999987 677899998
Q ss_pred EEEEee
Q 006327 401 KVKLRA 406 (650)
Q Consensus 401 ~v~~~~ 406 (650)
+|.++.
T Consensus 87 ~v~~a~ 92 (98)
T d1x4ha1 87 KVDLAV 92 (98)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 888764
No 74
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.9e-16 Score=129.49 Aligned_cols=77 Identities=22% Similarity=0.403 Sum_probs=71.5
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..+|||+|||+.+|+++|+++|++||.|..|.|+.+.. .++|||||+|.+.++|.+||+.|||..|.|+.|.|.++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~--~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT--BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 35799999999999999999999999999999998853 478999999999999999999999999999999998764
No 75
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.3e-16 Score=128.45 Aligned_cols=81 Identities=21% Similarity=0.435 Sum_probs=74.4
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
....++|||+|||+++|+++|+++|++||+|..|.|+.+. +.++|||||+|.+.++|.+||+.|++..|.|+.|.|.+
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 3467899999999999999999999999999999999875 34799999999999999999999999999999999988
Q ss_pred CCC
Q 006327 227 SED 229 (650)
Q Consensus 227 ~~~ 229 (650)
+..
T Consensus 86 A~~ 88 (93)
T d2cq3a1 86 ATA 88 (93)
T ss_dssp CCS
T ss_pred cCc
Confidence 764
No 76
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.7e-16 Score=130.59 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=73.5
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCee--------EEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCC
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVI--------RIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDG 398 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~--------~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~ 398 (650)
..++|||+|||..+|+++|+++|++||.|. .+.+..+..+++++|||||+|.+.++|.+||+.|||..|.|+
T Consensus 7 ~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 86 (101)
T d2cpea1 7 DNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGS 86 (101)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCE
Confidence 457999999999999999999999999874 566778888899999999999999999999999999999999
Q ss_pred eeEEEEee
Q 006327 399 NSKVKLRA 406 (650)
Q Consensus 399 ~i~v~~~~ 406 (650)
.|+|.++.
T Consensus 87 ~i~V~~a~ 94 (101)
T d2cpea1 87 KLKVSLAR 94 (101)
T ss_dssp ECEEECSS
T ss_pred EEEEEEcC
Confidence 99998764
No 77
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.62 E-value=2.7e-16 Score=127.63 Aligned_cols=78 Identities=15% Similarity=0.351 Sum_probs=68.0
Q ss_pred ceeeeecCCCCCCC-HHHHHHHhcccCCeeEEEEeec-CCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 328 VKTVFLDGVPPHWK-ENQIRDQIKGYGDVIRIVLARN-MSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 328 ~~~l~V~nLp~~~t-~~~l~~~F~~~G~i~~v~i~~~-~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
.++|||+|||+++| +++|+++|++||.|..|.|+.+ ..+++++|||||+|.+.++|.+||+ ||+..|.|+.|+|.++
T Consensus 4 ~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a 82 (86)
T d2ghpa3 4 GREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLA 82 (86)
T ss_dssp TTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEEC
T ss_pred CCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEc
Confidence 47999999999876 4569999999999999999764 5688999999999999999999996 9999999999999876
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 83 ~ 83 (86)
T d2ghpa3 83 D 83 (86)
T ss_dssp C
T ss_pred C
Confidence 4
No 78
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.9e-16 Score=124.13 Aligned_cols=71 Identities=27% Similarity=0.503 Sum_probs=68.7
Q ss_pred EEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCC
Q 006327 153 IFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCG 223 (650)
Q Consensus 153 lfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~ 223 (650)
|||+|||+++|+++|+++|++||.|..++++.++.++.++|+|||+|.+.++|.+|++.||+..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 89999999999999999999999999999999999999999999999999999999999999999998774
No 79
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=7.7e-16 Score=132.28 Aligned_cols=78 Identities=9% Similarity=0.187 Sum_probs=71.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||..+|+++|+++|++||.|..|.|..+ +.++|||||+|.+.++|..||+.|||..|.|+.|.|.++.
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~ 82 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYN 82 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3478999999999999999999999999999999865 5679999999999999999999999999999999999864
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 83 ~ 83 (114)
T d2f9da1 83 A 83 (114)
T ss_dssp H
T ss_pred C
Confidence 3
No 80
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.6e-16 Score=124.55 Aligned_cols=70 Identities=21% Similarity=0.447 Sum_probs=67.9
Q ss_pred eeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCee
Q 006327 331 VFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNS 400 (650)
Q Consensus 331 l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i 400 (650)
|||+|||.++|+++|+++|++||.|..+++++++.++.++|||||+|.+.++|.+||+.|||+.|.|+.|
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~ 70 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMA 70 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999765
No 81
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=3.4e-16 Score=127.84 Aligned_cols=76 Identities=17% Similarity=0.344 Sum_probs=69.8
Q ss_pred ceeeeecCCCCCCCHHHH---HHHhcccCCeeEEEEeecCCCCCc---ccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeE
Q 006327 328 VKTVFLDGVPPHWKENQI---RDQIKGYGDVIRIVLARNMSTAKR---KDYGFIDFSTHEAAVACINAINNKEFSDGNSK 401 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l---~~~F~~~G~i~~v~i~~~~~~~~~---~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~ 401 (650)
.++|||+|||+.+++++| +++|++||.|..|.|++++.++.+ +|||||+|.+.++|.+||+.|||..|.|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 468999999999999999 778999999999999999877654 48999999999999999999999999999988
Q ss_pred EE
Q 006327 402 VK 403 (650)
Q Consensus 402 v~ 403 (650)
|.
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 74
No 82
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=2.1e-16 Score=129.21 Aligned_cols=79 Identities=24% Similarity=0.453 Sum_probs=72.7
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
...+|||+|||+++|+++|+++|++||.|..|+|+.+. +.++|||||+|.+.++|.+||+.||+..|.|+.|.|..+.
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 45689999999999999999999999999999999885 3478999999999999999999999999999999988776
Q ss_pred C
Q 006327 229 D 229 (650)
Q Consensus 229 ~ 229 (650)
.
T Consensus 85 ~ 85 (89)
T d1cvja2 85 S 85 (89)
T ss_dssp C
T ss_pred C
Confidence 4
No 83
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61 E-value=1.3e-16 Score=129.58 Aligned_cols=80 Identities=24% Similarity=0.409 Sum_probs=69.5
Q ss_pred CCCEEEEcCCCcCCCH-HHHHHHHhccCCeEEEEEEec-CCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 149 KEHEIFIGGLDRDATQ-EDVRKVFERIGEVIEVRLHKN-FSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 149 ~~~tlfV~nLp~~~te-edL~~~F~~~G~V~~v~l~~d-~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
+.++|||+|||+++|+ ++|+++|++||.|+.|+|+.+ ..+++++|||||+|.+.++|.+||+ ||+..|.|+.|.|..
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 5789999999999874 569999999999999998764 5689999999999999999999996 999999999999887
Q ss_pred CCC
Q 006327 227 SED 229 (650)
Q Consensus 227 ~~~ 229 (650)
+..
T Consensus 82 a~~ 84 (86)
T d2ghpa3 82 ADK 84 (86)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 84
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3.9e-16 Score=126.30 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=71.1
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
..++|||+|||.++|+++|+++|++||.|..|+|..+ .+++++|||||+|.+.++|.+||+ +++..+.|+.|.|.+.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~-~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRT-LHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEEC-TTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeee-ccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 3579999999999999999999999999999999887 579999999999999999999996 7999999999987654
No 85
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=8.6e-16 Score=124.23 Aligned_cols=77 Identities=17% Similarity=0.380 Sum_probs=71.8
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
.++|||+|||.++|+++|+++|++||.|..|.|+.+. +++++|||||+|.+.++|.+||+ +++..|.|+.|.|.++.
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4689999999999999999999999999999998874 78999999999999999999995 89999999999998764
No 86
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=4.9e-16 Score=126.25 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=70.9
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
.++|||+|||+++++++|+++|+.||.|..+.++....+++++|||||+|.+.++|.+||+.||++.|.|+.|+|.++
T Consensus 9 ~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 468999999999999999999999999977555555578999999999999999999999999999999999999863
No 87
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=9.3e-16 Score=126.99 Aligned_cols=81 Identities=21% Similarity=0.359 Sum_probs=73.5
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
....++|||+|||+++|+++|+++|++||.|..|.+..+ ..+++||||+|.+.++|++||+.||+..|.|++|+|.+
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~ 87 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 456789999999999999999999999999999988544 56789999999999999999999999999999999988
Q ss_pred CCCC
Q 006327 227 SEDN 230 (650)
Q Consensus 227 ~~~~ 230 (650)
+...
T Consensus 88 a~~~ 91 (95)
T d1x4aa1 88 PRSG 91 (95)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7653
No 88
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.1e-15 Score=126.63 Aligned_cols=78 Identities=26% Similarity=0.532 Sum_probs=72.3
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...++|||+|||..+|+++|+++|++||.|++|+|+.+ +|||||+|.+.++|.+|+..|++..|.|+.|+|.++
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 45689999999999999999999999999999999865 789999999999999999999999999999999888
Q ss_pred CCCC
Q 006327 228 EDND 231 (650)
Q Consensus 228 ~~~~ 231 (650)
....
T Consensus 90 k~~p 93 (96)
T d1x4ga1 90 KESP 93 (96)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7644
No 89
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.3e-15 Score=126.02 Aligned_cols=76 Identities=16% Similarity=0.368 Sum_probs=69.8
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
..++|||+|||..+|+++|+++|++||.|..+.+..+ ..++|||||+|.+.++|..||+.||+..|.|+.|+|.++
T Consensus 13 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 13 NDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 3468999999999999999999999999999988655 457899999999999999999999999999999999875
No 90
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=5.4e-16 Score=130.20 Aligned_cols=82 Identities=21% Similarity=0.328 Sum_probs=75.5
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCe--------EEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEV--------IEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICG 219 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V--------~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g 219 (650)
...++|||+|||+.+|+++|+++|++||.| ..+.+.++..+++++|||||+|.+.++|.+||+.|++..|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 467899999999999999999999999987 457777888889999999999999999999999999999999
Q ss_pred CcCCCCCCCC
Q 006327 220 KRCGTAPSED 229 (650)
Q Consensus 220 ~~i~v~~~~~ 229 (650)
+.|.|.++..
T Consensus 86 r~i~V~~a~~ 95 (101)
T d2cpea1 86 SKLKVSLARK 95 (101)
T ss_dssp EECEEECSSC
T ss_pred EEEEEEEcCC
Confidence 9999988764
No 91
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=7.7e-16 Score=129.01 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=70.5
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEE
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKL 404 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~ 404 (650)
.++|||+|||.++|+++|+++|++||.|..+.++.+ .++.++|||||+|.+.++|.+||+.|||+.|.|+.+.|..
T Consensus 18 ~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~ 93 (101)
T d1x5oa1 18 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAP 93 (101)
T ss_dssp TTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCC
Confidence 468999999999999999999999999999999888 4788999999999999999999999999999999876643
No 92
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=5.4e-16 Score=126.12 Aligned_cols=70 Identities=20% Similarity=0.421 Sum_probs=65.2
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
++|||+|||+.+|+++|+++|++||.|..|.|+.+ |||||+|.+.++|++||..|||..|.|+.|.|.+.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~ 70 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 70 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBC
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEE
Confidence 47999999999999999999999999999998643 89999999999999999999999999999887764
No 93
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=2.1e-15 Score=127.24 Aligned_cols=78 Identities=18% Similarity=0.437 Sum_probs=69.5
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecC-CCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNM-STAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~-~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
+.++|||+|||+.+|+++|+++|++|| |+.+.++.+. .+++++|||||+|.+.++|++|+ .||+..|.|+.|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 458999999999999999999999999 7778777664 57889999999999999998776 59999999999999876
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 92 ~ 92 (104)
T d1wi8a_ 92 D 92 (104)
T ss_dssp C
T ss_pred C
Confidence 4
No 94
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.7e-16 Score=131.43 Aligned_cols=81 Identities=15% Similarity=0.244 Sum_probs=76.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
++++|||+|||..+++++|+++|++||.|..+.++.+..++.++|||||+|.+.++|..||+.|||..|.|+.|.|.++.
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 46799999999999999999999999999999999988899999999999999999999999999999999999999875
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 97 ~ 97 (102)
T d2cpxa1 97 N 97 (102)
T ss_dssp C
T ss_pred C
Confidence 4
No 95
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.1e-15 Score=126.02 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=72.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
...+|||+|||+++|+++|+++|.++|.|..+.++.+..++.++|||||+|.+.++|++|++ +|+..|.|+.|.|.+..
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~ 92 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSS 92 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECC
Confidence 34679999999999999999999999999988788887889999999999999999999996 99999999999988764
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 93 ~ 93 (104)
T d1wg5a_ 93 R 93 (104)
T ss_dssp T
T ss_pred H
Confidence 3
No 96
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=7.7e-16 Score=124.79 Aligned_cols=79 Identities=32% Similarity=0.562 Sum_probs=72.3
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..++|||+|||.++++++|+++|++||+|.+|++.++ ++||||+|.+.++|.+|++.||+..|.|+.|.|.++.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 4578999999999999999999999999999999754 7899999999999999999999999999999998887
Q ss_pred CCCcc
Q 006327 229 DNDTL 233 (650)
Q Consensus 229 ~~~~l 233 (650)
....|
T Consensus 81 ~~~~l 85 (86)
T d2cpja1 81 HSASL 85 (86)
T ss_dssp CCSCC
T ss_pred CcCCC
Confidence 65543
No 97
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2e-15 Score=125.38 Aligned_cols=72 Identities=15% Similarity=0.332 Sum_probs=66.0
Q ss_pred cceeeeecCCC-CCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 327 HVKTVFLDGVP-PHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp-~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
..++|||+||+ ..+++++|+++|++||.|+.|.| ++|||||+|.+.++|.+||+.|||+.|.|+.|+|.++
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 44689999997 57889999999999999999998 4789999999999999999999999999999999886
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 86 ~ 86 (98)
T d1wf2a_ 86 A 86 (98)
T ss_dssp T
T ss_pred C
Confidence 3
No 98
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.8e-15 Score=125.31 Aligned_cols=73 Identities=25% Similarity=0.432 Sum_probs=68.8
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
.++|||+|||..+++++|+++|++||.|..|+|+++ +|||||+|.+.++|.+||..|||..|.|+.|+|.|+.
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak 90 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 90 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 468999999999999999999999999999999865 7899999999999999999999999999999998763
No 99
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.58 E-value=3.1e-15 Score=120.47 Aligned_cols=75 Identities=19% Similarity=0.309 Sum_probs=68.5
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeC-CCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFS-DGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~-g~~i~v~~~ 405 (650)
++++|||+|||..+|+++|+++|++||.|..|.++++ .+|||||+|.+.++|..|+..|||..|. |+.|+|.|+
T Consensus 7 P~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~a 81 (83)
T d2b0ga1 7 PNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFA 81 (83)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEe
Confidence 4579999999999999999999999999999999865 4789999999999999999999999985 688999886
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 82 k 82 (83)
T d2b0ga1 82 K 82 (83)
T ss_dssp C
T ss_pred c
Confidence 4
No 100
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=3e-15 Score=127.91 Aligned_cols=76 Identities=11% Similarity=0.164 Sum_probs=70.0
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+.+++++|+++|++||.|..|.|.. .+|||||+|.+.++|.+||+.|||..|.|+.|.|.++.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 457999999999999999999999999999998843 57999999999999999999999999999999999876
Q ss_pred cc
Q 006327 407 RL 408 (650)
Q Consensus 407 ~~ 408 (650)
..
T Consensus 83 ~~ 84 (111)
T d1whxa_ 83 IG 84 (111)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 101
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.1e-16 Score=131.92 Aligned_cols=82 Identities=24% Similarity=0.331 Sum_probs=77.3
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.++++|||+|||.++|+++|+++|++||.|..+.++.+..+++++|||||+|.+.++|.+||+.||+..|.|+.|.|.++
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 35789999999999999999999999999999999988888999999999999999999999999999999999999887
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 96 k~ 97 (102)
T d2cpxa1 96 KN 97 (102)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 102
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=1.9e-15 Score=122.49 Aligned_cols=74 Identities=20% Similarity=0.462 Sum_probs=69.0
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
.++|||+|||..+++++|+++|++||.|..|.+.++ +|||||+|.+.++|.+|++.|||..|.|+.|+|.++..
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 367999999999999999999999999999999755 78999999999999999999999999999999998754
No 103
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.4e-15 Score=127.12 Aligned_cols=74 Identities=15% Similarity=0.311 Sum_probs=68.5
Q ss_pred eeeeecCCCC-CCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 329 KTVFLDGVPP-HWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 329 ~~l~V~nLp~-~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
++|||+||++ .+|+++|+++|++||.|..|.|+++ .+|||||+|.+.++|.+||+.|||..|.|+.|+|.++..
T Consensus 3 ~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~-----~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 3 SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFN-----KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp SEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCT-----TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CEEEEeCCCcccCCHHHHHHHHhhccccceEEEEec-----ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 6899999965 5999999999999999999999887 378999999999999999999999999999999998643
No 104
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=5.6e-16 Score=130.48 Aligned_cols=79 Identities=9% Similarity=0.094 Sum_probs=71.5
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
..+|||+|||+++|+++|+++|..||.|..+.++....+|.++|||||+|.+.++|++||. ||+..|+|+.|.|.+...
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 4689999999999999999999999999876666666789999999999999999999996 999999999999987643
No 105
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=7.2e-15 Score=122.00 Aligned_cols=74 Identities=15% Similarity=0.341 Sum_probs=68.5
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
...+|||+|||+.+++++|+++|++||.|+.|.|.. +|||||+|.+.++|++||+.|||..|.|+.|+|.+..
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 457899999999999999999999999999999853 5899999999999999999999999999999998864
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 87 ~ 87 (98)
T d1wg4a_ 87 V 87 (98)
T ss_dssp E
T ss_pred c
Confidence 4
No 106
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.57 E-value=1.5e-16 Score=130.46 Aligned_cols=82 Identities=15% Similarity=0.327 Sum_probs=74.0
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTA 225 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~ 225 (650)
......+|||+|||+++|+++|+++|++||.|..|.|+.+ .+|+++|||||+|.+.++|.+||+ |++..|.|+.|.|.
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~ 86 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLE 86 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEE
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEE
Confidence 3446779999999999999999999999999999888654 689999999999999999999996 99999999999988
Q ss_pred CCCC
Q 006327 226 PSED 229 (650)
Q Consensus 226 ~~~~ 229 (650)
.+..
T Consensus 87 ~ak~ 90 (91)
T d1fjeb1 87 KPKG 90 (91)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 7753
No 107
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.57 E-value=3.8e-16 Score=128.07 Aligned_cols=78 Identities=12% Similarity=0.241 Sum_probs=71.3
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
...+|||+|||+.+|+++|+++|++||.|..|.|+.+ .+++++|||||+|.+.++|.+||+ |||..|.|+.|.|.++.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 4578999999999999999999999999999988755 678999999999999999999996 99999999999888653
No 108
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=6.6e-16 Score=126.08 Aligned_cols=76 Identities=22% Similarity=0.411 Sum_probs=69.5
Q ss_pred CCCEEEEcCCCcCCCHHHH---HHHHhccCCeEEEEEEecCCCCCC---cceEEEEEeCHHHHHHHHHhccCCcccCCcC
Q 006327 149 KEHEIFIGGLDRDATQEDV---RKVFERIGEVIEVRLHKNFSTNRN---KGYAFVKFANKEHAKRALTEMKNPVICGKRC 222 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL---~~~F~~~G~V~~v~l~~d~~tg~~---~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i 222 (650)
..++|||+|||+++|+++| .++|++||+|..|.|++++.++.+ +|||||+|.+.++|.+|++.||+..|.|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 4678999999999999999 678999999999999999877654 4899999999999999999999999999988
Q ss_pred CC
Q 006327 223 GT 224 (650)
Q Consensus 223 ~v 224 (650)
++
T Consensus 87 kv 88 (89)
T d2cpia1 87 KA 88 (89)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 109
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.5e-15 Score=120.39 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=67.9
Q ss_pred ccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 326 AHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 326 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
...++|||+|||..+|+++|+++|++||.|..+.+.. ++|||||+|.+.++|..||..|||..|.|+.|.|.++
T Consensus 6 ~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~a 79 (86)
T d2cpda1 6 SSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 79 (86)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECC
T ss_pred cCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 3457999999999999999999999999988877743 5889999999999999999999999999999998876
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
.
T Consensus 80 k 80 (86)
T d2cpda1 80 K 80 (86)
T ss_dssp C
T ss_pred c
Confidence 4
No 110
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.4e-15 Score=126.72 Aligned_cols=81 Identities=22% Similarity=0.223 Sum_probs=73.2
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
....+|||+|||+++|+++|+++|..||.|..+.++.+..+++++|+|||+|.+.++|++||+ +++..|.|+.|.|..+
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 356789999999999999999999999999887777777889999999999999999999996 8999999999988765
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 92 ~~ 93 (104)
T d1wg5a_ 92 SR 93 (104)
T ss_dssp CT
T ss_pred CH
Confidence 43
No 111
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.4e-15 Score=125.23 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=69.8
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
...+|||+|||+++|+++|+++|..|| |+.|.++.+. ++.++|||||+|.+.++|++||+ ||++.|.|+.|+|.++.
T Consensus 14 ~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 14 TGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 457999999999999999999999997 5578887774 57899999999999999999986 89999999999998865
Q ss_pred c
Q 006327 407 R 407 (650)
Q Consensus 407 ~ 407 (650)
.
T Consensus 91 ~ 91 (102)
T d1weza_ 91 T 91 (102)
T ss_dssp C
T ss_pred C
Confidence 3
No 112
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.55 E-value=2.9e-15 Score=117.92 Aligned_cols=73 Identities=22% Similarity=0.340 Sum_probs=66.3
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
.||||+|||+++|+++|+++|++||.|+.|+|+.++. ..+++|||+|.+.++|.+||. +++..|.|+.|.|..
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~ 73 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSH 73 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEE
Confidence 4899999999999999999999999999999998864 346799999999999999996 899999999987754
No 113
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.55 E-value=4.2e-15 Score=119.62 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=68.8
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCccc-CCcCCC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVIC-GKRCGT 224 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~-g~~i~v 224 (650)
+..+++||||+|||.++|+++|.++|++||.|+.|+++++ .+|||||+|.+.++|.+|++.|++..|. |+.|.|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEE
Confidence 3446899999999999999999999999999999999754 3689999999999999999999998884 678887
Q ss_pred CCCC
Q 006327 225 APSE 228 (650)
Q Consensus 225 ~~~~ 228 (650)
.+++
T Consensus 79 ~~ak 82 (83)
T d2b0ga1 79 TFAK 82 (83)
T ss_dssp EECC
T ss_pred EEec
Confidence 7664
No 114
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=5.5e-15 Score=120.25 Aligned_cols=73 Identities=16% Similarity=0.311 Sum_probs=64.2
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
+++|||+|||+.+++++|+++|++|| +..+.+ +..+|||||+|.+.++|.+||..||+..|.|+.|.|.++..
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 47899999999999999999999999 333333 34689999999999999999999999999999999998743
No 115
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=1.2e-15 Score=123.91 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
...+|||+|||+++|+++|+++|+.||.|..+.++....+++++|+|||+|.+.++|.+||..||+..|.|++|+|..
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 456799999999999999999999999987644444457899999999999999999999999999999999998753
No 116
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=5.4e-15 Score=122.56 Aligned_cols=81 Identities=16% Similarity=0.333 Sum_probs=71.4
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCC-eeEEEEeecC-CCCCcccEEEEEeCCHHHHHHHHHHhCCC--eeCCCeeEEEE
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGD-VIRIVLARNM-STAKRKDYGFIDFSTHEAAVACINAINNK--EFSDGNSKVKL 404 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~-i~~v~i~~~~-~~~~~~G~afV~F~~~~~A~~Ai~~lng~--~~~g~~i~v~~ 404 (650)
++|||+|||..+|+++|+++|++||. |..|.|+++. .+++++|||||+|.++++|..||+.|++. .+.|+.|.|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 68999999999999999999999995 8999999875 46889999999999999999999999654 45689999998
Q ss_pred eeccC
Q 006327 405 RARLS 409 (650)
Q Consensus 405 ~~~~~ 409 (650)
+....
T Consensus 82 A~p~~ 86 (96)
T d2disa1 82 AEPEI 86 (96)
T ss_dssp SCSSC
T ss_pred cCCCC
Confidence 85433
No 117
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3e-15 Score=126.17 Aligned_cols=79 Identities=23% Similarity=0.457 Sum_probs=70.2
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecC-CCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNF-STNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~-~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
+.++|||+|||+++|+++|+++|++|| |+.++++.+. .+++++|||||+|.+.++|++|++ |++..|.|+.|.|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEEC
Confidence 568999999999999999999999999 7778777665 468899999999999999987775 9999999999998776
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 92 ~~ 93 (104)
T d1wi8a_ 92 DQ 93 (104)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 118
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.5e-15 Score=120.00 Aligned_cols=73 Identities=14% Similarity=0.306 Sum_probs=66.3
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCC-eeCCCeeEEEEeec
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNK-EFSDGNSKVKLRAR 407 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~-~~~g~~i~v~~~~~ 407 (650)
++|||+|||.++|+++|+++|++||.|..+.++. ++|||||+|.+.++|.+||+.|||. .|.|+.|+|.++..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 5799999999999999999999999998877765 4789999999999999999999996 69999999988653
No 119
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=2.7e-15 Score=128.23 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=67.9
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..++|||+|||+++|+++|+++|++||+|+.|.|. .++|||||+|.+.++|.+||+.||+..|.|+.|.|.++.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 45799999999999999999999999999999883 457999999999999999999999999999999886653
No 120
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.5e-15 Score=121.27 Aligned_cols=70 Identities=20% Similarity=0.334 Sum_probs=64.6
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.+|||+|||+++|+++|+++|++||.|..|.|++ .|||||+|.+.++|++||+.|++..|.|+.|.|...
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~ 70 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR-------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 70 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT-------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBC
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccccccc-------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEE
Confidence 3699999999999999999999999999999854 389999999999999999999999999999987654
No 121
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.54 E-value=6.7e-15 Score=115.78 Aligned_cols=73 Identities=21% Similarity=0.379 Sum_probs=66.8
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEE
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKL 404 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~ 404 (650)
++|||+|||+.+++++|+++|++||.|..|.|+.+..+ .++||||+|.+.++|.+||. ||++.|+|+.|.|..
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~ 73 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSH 73 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEE
Confidence 47999999999999999999999999999999988653 45799999999999999985 899999999988864
No 122
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=6.3e-15 Score=122.19 Aligned_cols=93 Identities=27% Similarity=0.414 Sum_probs=80.6
Q ss_pred CCcceeCCcCCCccHHHHHHHHhhcCCcceEEEEEeccccccCCCcceEEEEecCHHHHHHHHHHhCCCCeeeCCCCcce
Q 006327 230 NDTLFVGNICNTWTKEAIKQKLKDYGVEGVENINLVSDIQHEGLSRGFAFVMFSCHVDAMAAYKRLQKPDVVFGHPERTV 309 (650)
Q Consensus 230 ~~~l~v~nLp~~~te~~l~~~F~~~G~~~i~~i~i~~d~~~~g~srG~aFV~F~~~e~A~~A~~~l~~~~~~~g~~~~~l 309 (650)
+++|||+|||..+|+++|+++|+++|. .|..+.|+++...+++++|||||+|.++++|..|++.|++..+.++ ++.|
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~-~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~--g~~i 77 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTE-GVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLW--GHQI 77 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHST-TEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBT--TBCC
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCC-cceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEEC--CEEE
Confidence 357999999999999999999999994 3889999998777899999999999999999999999987766543 7899
Q ss_pred eecccCCCCCCCcccc
Q 006327 310 KVAFAEPLREPDPEIM 325 (650)
Q Consensus 310 ~v~~a~~~~~~~~~~~ 325 (650)
.|.||.|+.......+
T Consensus 78 ~V~~A~p~~~~~~~~~ 93 (96)
T d2disa1 78 AVDWAEPEIDVDEDVM 93 (96)
T ss_dssp EEEESCSSCSTTTCCS
T ss_pred EEEEcCCCCCCChHHh
Confidence 9999998776655443
No 123
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.54 E-value=6.5e-15 Score=122.05 Aligned_cols=75 Identities=11% Similarity=0.221 Sum_probs=68.2
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+|||+++|+++|+++|++||.|..+.. ++.++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.
T Consensus 15 ~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 15 AARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp GGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 4579999999999999999999999998866643 57789999999999999999999999999999999998763
No 124
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=8e-15 Score=116.74 Aligned_cols=72 Identities=15% Similarity=0.364 Sum_probs=66.4
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
..++|||+||+ +|+++|+++|++||.|..|.+.++ +|||||+|.+.++|..|+..|||..|.|+.|+|.++.
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 45799999996 899999999999999999999654 7899999999999999999999999999999998874
No 125
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.2e-14 Score=118.35 Aligned_cols=76 Identities=18% Similarity=0.345 Sum_probs=68.4
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCee-CCCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEF-SDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~-~g~~i~v~~~ 405 (650)
++++|||+|||..+|+++|+++|++||.|..+.++.. +.+|||||+|.+.++|.+|+..|||..| .|+.|+|.++
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 4679999999999999999999999999988877654 3578999999999999999999999998 5899999886
Q ss_pred e
Q 006327 406 A 406 (650)
Q Consensus 406 ~ 406 (650)
+
T Consensus 85 k 85 (88)
T d2adca2 85 K 85 (88)
T ss_dssp S
T ss_pred C
Confidence 4
No 126
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.7e-15 Score=124.85 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=69.0
Q ss_pred CCEEEEcCCCc-CCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 150 EHEIFIGGLDR-DATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 150 ~~tlfV~nLp~-~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
+++|||+||++ .+|+++|+++|++||.|..|+|++++ +|||||+|.+.++|.+|++.|++..|.|+.|.|..+.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 58999999965 59999999999999999999998763 7899999999999999999999999999999998875
Q ss_pred C
Q 006327 229 D 229 (650)
Q Consensus 229 ~ 229 (650)
.
T Consensus 77 ~ 77 (109)
T d2adca1 77 H 77 (109)
T ss_dssp C
T ss_pred C
Confidence 3
No 127
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.6e-14 Score=113.57 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=63.0
Q ss_pred eeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 331 VFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 331 l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
|||+|||.++++++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|+..|||..|.|+.|+|.++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~ 70 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPT 70 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCS
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCC
Confidence 79999999999999999999999 555554 34689999999999999999999999999999999998743
No 128
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.1e-14 Score=118.69 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=69.0
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcc-cCCcCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVI-CGKRCGTAP 226 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l-~g~~i~v~~ 226 (650)
.+++||||+|||.++|+++|+++|++||.|..+.++. ++++++|||+|.+.++|.+|+..|++..| .|+.|+|..
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 4688999999999999999999999999998887754 35688999999999999999999999888 589998887
Q ss_pred CC
Q 006327 227 SE 228 (650)
Q Consensus 227 ~~ 228 (650)
++
T Consensus 84 sk 85 (88)
T d2adca2 84 SK 85 (88)
T ss_dssp CS
T ss_pred CC
Confidence 65
No 129
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3e-15 Score=122.83 Aligned_cols=80 Identities=23% Similarity=0.477 Sum_probs=71.5
Q ss_pred CCCEEEEcCCCcCCCHHHHHH----HHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRK----VFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGT 224 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~----~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v 224 (650)
+++||||+|||+.+|+++|++ +|++||+|.+|++.. +++++|||||+|.+.++|.+|++.||+..+.|+.|.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 578999999999999999864 689999999998854 4678999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 006327 225 APSEDND 231 (650)
Q Consensus 225 ~~~~~~~ 231 (650)
.++....
T Consensus 79 ~~ak~~~ 85 (91)
T d1nu4a_ 79 QYAKTDS 85 (91)
T ss_dssp EECSSCC
T ss_pred EEeCCCc
Confidence 8876543
No 130
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=6.2e-15 Score=120.86 Aligned_cols=78 Identities=14% Similarity=0.394 Sum_probs=69.7
Q ss_pred cceeeeecCCCCCCCHHHHHH----HhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEE
Q 006327 327 HVKTVFLDGVPPHWKENQIRD----QIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKV 402 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~----~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v 402 (650)
+.++|||+|||+.+|+++|++ +|++||.|..|.+.. +++++|||||+|.+.++|.+|++.|||..|.|+.|.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 357999999999999998864 689999999998865 3668999999999999999999999999999999999
Q ss_pred EEeec
Q 006327 403 KLRAR 407 (650)
Q Consensus 403 ~~~~~ 407 (650)
.++..
T Consensus 79 ~~ak~ 83 (91)
T d1nu4a_ 79 QYAKT 83 (91)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 88754
No 131
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.7e-15 Score=126.57 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=73.1
Q ss_pred cccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEE
Q 006327 325 MAHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKL 404 (650)
Q Consensus 325 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~ 404 (650)
.....+|||+|||+.+|+++|+++|+.||.|..+.++.+..+|.++|||||+|.+.++|.+|+. ||+..|+|+.|.|..
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEE
Confidence 3356799999999999999999999999999887777777789999999999999999999996 999999999999987
Q ss_pred ee
Q 006327 405 RA 406 (650)
Q Consensus 405 ~~ 406 (650)
..
T Consensus 94 ~~ 95 (112)
T d1wela1 94 IT 95 (112)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 132
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.52 E-value=2.1e-15 Score=125.11 Aligned_cols=80 Identities=21% Similarity=0.402 Sum_probs=71.1
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTA 225 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~ 225 (650)
.....++|||+|||+++|+++|+++|++||.|..+.. ++.+++||||+|.+.++|.+|++.||+..|.|+.|.|.
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~ 86 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLY 86 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3446789999999999999999999999998866543 57889999999999999999999999999999999998
Q ss_pred CCCCC
Q 006327 226 PSEDN 230 (650)
Q Consensus 226 ~~~~~ 230 (650)
++...
T Consensus 87 ~a~~k 91 (96)
T d1fjca_ 87 YTGEK 91 (96)
T ss_dssp ECSSS
T ss_pred EeCCC
Confidence 77653
No 133
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.6e-15 Score=120.82 Aligned_cols=72 Identities=15% Similarity=0.341 Sum_probs=64.9
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
.+++|||+|||+.+|+++|+++|++||.|..|+++. .++|||||+|.+.++|++||. ++..|.|+.|.|.++
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 357999999999999999999999999999998754 368999999999999999984 888999999888765
No 134
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=9.5e-15 Score=118.45 Aligned_cols=75 Identities=23% Similarity=0.374 Sum_probs=68.6
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
..++|||+|||+++|+++|+++|++||.|..+.+. +++|||||+|.+.++|.+|+..||+..|.|+.|.|.++.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 45799999999999999999999999999887774 458899999999999999999999999999999998876
Q ss_pred C
Q 006327 229 D 229 (650)
Q Consensus 229 ~ 229 (650)
+
T Consensus 81 P 81 (86)
T d2cpda1 81 P 81 (86)
T ss_dssp C
T ss_pred C
Confidence 4
No 135
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.1e-15 Score=124.72 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=70.4
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
.....+|||+|||+++|+++|+++|..||. ..|+++.+ .++.++|||||+|.+.++|++||+ |++..|.|+.|.|.+
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~-~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIG-PDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEES-SSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEe-cCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 345689999999999999999999999984 57888777 468999999999999999999996 899999999998866
Q ss_pred CCC
Q 006327 227 SED 229 (650)
Q Consensus 227 ~~~ 229 (650)
+..
T Consensus 89 s~~ 91 (102)
T d1weza_ 89 NST 91 (102)
T ss_dssp ECC
T ss_pred cCC
Confidence 543
No 136
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=9.3e-15 Score=114.93 Aligned_cols=74 Identities=23% Similarity=0.356 Sum_probs=66.0
Q ss_pred EEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCCCCc
Q 006327 153 IFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSEDNDT 232 (650)
Q Consensus 153 lfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~~~~ 232 (650)
|||+|||+++|+++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|+..||+..+.|++|.|..+.....
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~~ 73 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDAL 73 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTTC
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCCc
Confidence 79999999999999999999999 555554 46789999999999999999999999999999999988876554
Q ss_pred c
Q 006327 233 L 233 (650)
Q Consensus 233 l 233 (650)
|
T Consensus 74 l 74 (75)
T d1wi6a1 74 L 74 (75)
T ss_dssp C
T ss_pred c
Confidence 4
No 137
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=9.5e-15 Score=116.28 Aligned_cols=75 Identities=20% Similarity=0.382 Sum_probs=68.1
Q ss_pred cCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 147 IKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
+...+||||+||+ +|+++|+++|++||.|.+|.+.+ .++||||+|.+.++|.+|+..||+..|.|+.|+|.+
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 73 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDP------PRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNI 73 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEET------TTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeecc------CCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEE
Confidence 3467899999995 89999999999999999999964 478999999999999999999999999999999988
Q ss_pred CCC
Q 006327 227 SED 229 (650)
Q Consensus 227 ~~~ 229 (650)
+..
T Consensus 74 a~~ 76 (79)
T d2bz2a1 74 ARK 76 (79)
T ss_dssp CCS
T ss_pred ecC
Confidence 754
No 138
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.3e-15 Score=119.24 Aligned_cols=74 Identities=24% Similarity=0.428 Sum_probs=66.6
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCC-cccCCcCCCCCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNP-VICGKRCGTAPSED 229 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~-~l~g~~i~v~~~~~ 229 (650)
.+|||+|||.++|+++|+++|++||.|..+.+.+ ++|||||+|.+.++|.+|++.||+. .|.|+.|.|.++.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 4799999999999999999999999998877764 3789999999999999999999986 59999999988765
Q ss_pred C
Q 006327 230 N 230 (650)
Q Consensus 230 ~ 230 (650)
.
T Consensus 76 k 76 (80)
T d2cqha1 76 K 76 (80)
T ss_dssp C
T ss_pred c
Confidence 3
No 139
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.7e-15 Score=121.28 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=68.4
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSE 228 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~ 228 (650)
.+++|||+|||+++|+++|+++|++|| |..+.+ +++++||||+|.+.++|++|++.||+..|.|+.|.|..+.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 568999999999999999999999999 333433 3568999999999999999999999999999999998887
Q ss_pred CCCcce
Q 006327 229 DNDTLF 234 (650)
Q Consensus 229 ~~~~l~ 234 (650)
....+.
T Consensus 77 ~~~~~~ 82 (88)
T d1wg1a_ 77 TDALLC 82 (88)
T ss_dssp CCCCCS
T ss_pred CCCCCC
Confidence 655443
No 140
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=1.8e-14 Score=119.53 Aligned_cols=73 Identities=12% Similarity=0.318 Sum_probs=66.1
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCC--eeEEEE
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDG--NSKVKL 404 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~--~i~v~~ 404 (650)
++++|||+|||.++|+++|+++|++||.|..|++.++ ++||||+|.+.++|.+|++.||+..|.|. .|+|.|
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ 89 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 89 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEe
Confidence 4589999999999999999999999999999999754 67999999999999999999999999875 566666
Q ss_pred e
Q 006327 405 R 405 (650)
Q Consensus 405 ~ 405 (650)
+
T Consensus 90 a 90 (97)
T d1whya_ 90 A 90 (97)
T ss_dssp C
T ss_pred C
Confidence 5
No 141
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=1.7e-14 Score=119.72 Aligned_cols=72 Identities=18% Similarity=0.381 Sum_probs=66.0
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
....+|||+|||+++++++|+++|++||+|+.|.|.+ +|||||+|.+.++|++||+.||+..|.|+.|.|..
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~ 84 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSY 84 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEE
Confidence 4577899999999999999999999999999999853 58999999999999999999999999999987644
No 142
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.5e-14 Score=121.22 Aligned_cols=75 Identities=7% Similarity=0.153 Sum_probs=66.3
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeC--CCeeEEEE
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFS--DGNSKVKL 404 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~--g~~i~v~~ 404 (650)
+..+|||+|||+.+|+++|+++|++||.|..|.|+.++ .+|||||+|.+.++|+.||..|||..|. +..|.|.+
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 45789999999999999999999999999999998773 5899999999999999999999999996 44555554
Q ss_pred e
Q 006327 405 R 405 (650)
Q Consensus 405 ~ 405 (650)
+
T Consensus 82 s 82 (108)
T d2adba1 82 S 82 (108)
T ss_dssp C
T ss_pred c
Confidence 3
No 143
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=7.4e-14 Score=117.33 Aligned_cols=77 Identities=10% Similarity=0.220 Sum_probs=68.6
Q ss_pred ccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHh--CCCeeCCCeeEEE
Q 006327 326 AHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAI--NNKEFSDGNSKVK 403 (650)
Q Consensus 326 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~l--ng~~~~g~~i~v~ 403 (650)
.++++|||+|||..+|+++|+++|++||.|+.|.+.+. +|+|||+|.+.++|.+||..| ++..+.|+.|+|.
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~ 86 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFN 86 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEE
Confidence 35689999999999999999999999999999999754 789999999999999999987 5567889999999
Q ss_pred Eeecc
Q 006327 404 LRARL 408 (650)
Q Consensus 404 ~~~~~ 408 (650)
++...
T Consensus 87 ~s~~~ 91 (104)
T d1wexa_ 87 YSTSK 91 (104)
T ss_dssp ECSSS
T ss_pred EcCCC
Confidence 87543
No 144
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=3.4e-15 Score=125.62 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=69.6
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
...+|||+|||+++|+++|+++|+.||.|..+.++....+|+++|+|||+|.+.++|++||+ |++..|.|+.|.|.++
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 45789999999999999999999999999876565666789999999999999999999996 8999999998877553
No 145
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=2.7e-14 Score=118.43 Aligned_cols=76 Identities=17% Similarity=0.419 Sum_probs=67.9
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCC--cCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGK--RCGTA 225 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~--~i~v~ 225 (650)
.+.++|||+|||.++|+++|+++|++||.|+.|+++++ ++||||+|.+.++|.+|++.||+..|.|. +|+|.
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 36799999999999999999999999999999999654 78999999999999999999999999874 67776
Q ss_pred CCCC
Q 006327 226 PSED 229 (650)
Q Consensus 226 ~~~~ 229 (650)
+++.
T Consensus 89 ~ak~ 92 (97)
T d1whya_ 89 FAKS 92 (97)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 6654
No 146
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=9.6e-15 Score=121.25 Aligned_cols=73 Identities=25% Similarity=0.545 Sum_probs=66.5
Q ss_pred CCCEEEEcCCC-cCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 149 KEHEIFIGGLD-RDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp-~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
..++|||+||| ..+++++|+++|++||.|+.|.| ++|||||+|.+.++|.+||+.||+..|.|+.|.|.++
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45789999996 57889999999999999999998 3689999999999999999999999999999999877
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
..
T Consensus 86 ~~ 87 (98)
T d1wf2a_ 86 AE 87 (98)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 147
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.2e-14 Score=121.55 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=67.4
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCccc--CCcCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVIC--GKRCGTAP 226 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~--g~~i~v~~ 226 (650)
...+|||+|||+.+|+++|+++|++||.|..|.|+.+ +++|+|||+|.+.++|++|+..|++..|. ++.|.+..
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~----~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK----NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEE----TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEee----CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 4568999999999999999999999999999999876 35899999999999999999999999884 56666655
Q ss_pred CC
Q 006327 227 SE 228 (650)
Q Consensus 227 ~~ 228 (650)
+.
T Consensus 82 s~ 83 (108)
T d2adba1 82 SK 83 (108)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 148
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=5.4e-15 Score=126.20 Aligned_cols=79 Identities=19% Similarity=0.271 Sum_probs=71.1
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
....+|||+|||+++|+++|+++|+.||.|..+.++.+..+|.++|+|||+|.+.++|.+||+ ||+..|.|+.|.|.++
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 357799999999999999999999999999877777777889999999999999999999996 8999999999877543
No 149
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=8.2e-15 Score=119.27 Aligned_cols=75 Identities=24% Similarity=0.468 Sum_probs=66.9
Q ss_pred CCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 148 KKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
..+++|||+|||+++|+++|+++|++||.|..|++. ..+++||||+|.+.++|++||. ++..|.|++|.|.++
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 357899999999999999999999999999999774 3568999999999999999995 677899999998877
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
.+
T Consensus 76 ~~ 77 (88)
T d1wf0a_ 76 EP 77 (88)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 150
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=2.3e-14 Score=119.19 Aligned_cols=81 Identities=21% Similarity=0.222 Sum_probs=71.2
Q ss_pred cCCCCEEEEcCCCcC-CCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHH--hccCCcccCCcCC
Q 006327 147 IKKEHEIFIGGLDRD-ATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALT--EMKNPVICGKRCG 223 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~-~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~--~l~~~~l~g~~i~ 223 (650)
...+++|||+|||.+ +|+++|.++|++||.|..|.|+++ +++|||+|.+.++|.+|++ .+++..|.|+.|.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~ 88 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVK 88 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEE
Confidence 346789999999985 899999999999999999999754 6899999999999999998 4678889999999
Q ss_pred CCCCCCCCcc
Q 006327 224 TAPSEDNDTL 233 (650)
Q Consensus 224 v~~~~~~~~l 233 (650)
|..+.....|
T Consensus 89 V~~s~~~~~l 98 (99)
T d1x4fa1 89 VDLSEKYKKL 98 (99)
T ss_dssp EEEECSCSSS
T ss_pred EEEcCCcccC
Confidence 9888766554
No 151
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.1e-13 Score=112.49 Aligned_cols=75 Identities=17% Similarity=0.323 Sum_probs=67.9
Q ss_pred ccceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHh--CCCeeCCCeeEEE
Q 006327 326 AHVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAI--NNKEFSDGNSKVK 403 (650)
Q Consensus 326 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~l--ng~~~~g~~i~v~ 403 (650)
.++++|||+|||..+++++|+++|++||.|..|.+.++ ++||||+|.+.++|.+|+..+ ++..|.|+.|.|.
T Consensus 6 ~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~ 79 (88)
T d2cq1a1 6 APSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQ 79 (88)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEE
Confidence 35689999999999999999999999999999998754 689999999999999999865 6789999999998
Q ss_pred Eee
Q 006327 404 LRA 406 (650)
Q Consensus 404 ~~~ 406 (650)
++.
T Consensus 80 ~sk 82 (88)
T d2cq1a1 80 YSN 82 (88)
T ss_dssp ECS
T ss_pred ECC
Confidence 874
No 152
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=5.6e-14 Score=114.29 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=69.3
Q ss_pred ccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhc--cCCcccCCcCC
Q 006327 146 KIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEM--KNPVICGKRCG 223 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l--~~~~l~g~~i~ 223 (650)
...++++|||+|||.++|+++|+++|++||.|..|+++++ +++|||+|.+.++|.+|++.+ ++..+.|++|.
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~ 77 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIY 77 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEE
Confidence 3558999999999999999999999999999999998754 689999999999999999865 56789999999
Q ss_pred CCCCCC
Q 006327 224 TAPSED 229 (650)
Q Consensus 224 v~~~~~ 229 (650)
|..+..
T Consensus 78 v~~sk~ 83 (88)
T d2cq1a1 78 IQYSNH 83 (88)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 877653
No 153
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=9.9e-14 Score=116.54 Aligned_cols=79 Identities=23% Similarity=0.285 Sum_probs=69.3
Q ss_pred hccCCCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhcc--CCcccCCcC
Q 006327 145 RKIKKEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMK--NPVICGKRC 222 (650)
Q Consensus 145 ~~~~~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~--~~~l~g~~i 222 (650)
....++++|||+|||..+|+++|.++|++||.|+.|+|.+ .+++|||+|.+.++|..|+..|+ ...+.|++|
T Consensus 10 ~~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~------~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l 83 (104)
T d1wexa_ 10 HKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMP------FKRQALVEFENIDSAKECVTFAADVPVYIAGQQA 83 (104)
T ss_dssp CCCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEET------TTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBC
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEe------cceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEE
Confidence 3455789999999999999999999999999999999964 47899999999999999999874 456789999
Q ss_pred CCCCCCC
Q 006327 223 GTAPSED 229 (650)
Q Consensus 223 ~v~~~~~ 229 (650)
.|..+..
T Consensus 84 ~v~~s~~ 90 (104)
T d1wexa_ 84 FFNYSTS 90 (104)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9877754
No 154
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=1.2e-13 Score=114.70 Aligned_cols=76 Identities=22% Similarity=0.384 Sum_probs=68.4
Q ss_pred cceeeeecCCCCC-CCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHH--HhCCCeeCCCeeEEE
Q 006327 327 HVKTVFLDGVPPH-WKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACIN--AINNKEFSDGNSKVK 403 (650)
Q Consensus 327 ~~~~l~V~nLp~~-~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~--~lng~~~~g~~i~v~ 403 (650)
.+++|||+|||.. +|+++|.++|++||.|..|.|+++ +|+|||+|.+.++|.+||+ .+++..|.|+.|+|.
T Consensus 17 ~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~ 90 (99)
T d1x4fa1 17 LGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVD 90 (99)
T ss_dssp CCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEE
T ss_pred CCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEE
Confidence 4578999999985 899999999999999999999765 6899999999999999997 578889999999999
Q ss_pred Eeecc
Q 006327 404 LRARL 408 (650)
Q Consensus 404 ~~~~~ 408 (650)
++...
T Consensus 91 ~s~~~ 95 (99)
T d1x4fa1 91 LSEKY 95 (99)
T ss_dssp EECSC
T ss_pred EcCCc
Confidence 88543
No 155
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=5.3e-14 Score=114.43 Aligned_cols=82 Identities=16% Similarity=0.264 Sum_probs=71.2
Q ss_pred ccCCCCEEEEcCCCcC-CCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhc--cCCcccCCcC
Q 006327 146 KIKKEHEIFIGGLDRD-ATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEM--KNPVICGKRC 222 (650)
Q Consensus 146 ~~~~~~tlfV~nLp~~-~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l--~~~~l~g~~i 222 (650)
..+.+++|||+|||.. +|+++|.++|++||.|..|.|+.+ +++|||+|.+.++|..|++.| ++..+.|++|
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l 77 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPV 77 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEEC
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceE
Confidence 4568899999999986 899999999999999999999754 569999999999999999976 5678999999
Q ss_pred CCCCCCCCCcc
Q 006327 223 GTAPSEDNDTL 233 (650)
Q Consensus 223 ~v~~~~~~~~l 233 (650)
.|..+....+|
T Consensus 78 ~V~~s~~~~~l 88 (89)
T d1x4da1 78 RVHLSQKYKRI 88 (89)
T ss_dssp EEEEECCCTTS
T ss_pred EEEECCCcccc
Confidence 99887654443
No 156
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=4.8e-15 Score=121.37 Aligned_cols=77 Identities=14% Similarity=0.311 Sum_probs=68.0
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEE-----ecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLH-----KNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTA 225 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~-----~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~ 225 (650)
++|||+|||+++|+++|+++|++||.|..+.+. .+..+++++|||||+|.+.++|++|++ ||+..|.|+.|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 689999999999999999999999987666553 345678899999999999999999995 99999999999997
Q ss_pred CCC
Q 006327 226 PSE 228 (650)
Q Consensus 226 ~~~ 228 (650)
...
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 157
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.40 E-value=3.2e-13 Score=109.73 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=68.0
Q ss_pred ccceeeeecCCCCC-CCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHh--CCCeeCCCeeEE
Q 006327 326 AHVKTVFLDGVPPH-WKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAI--NNKEFSDGNSKV 402 (650)
Q Consensus 326 ~~~~~l~V~nLp~~-~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~l--ng~~~~g~~i~v 402 (650)
..+++|||+|||.. +|+++|.++|++||.|..|.++.+ +++|||+|++.++|..|+..| ++..+.|+.|+|
T Consensus 6 ~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 6 ETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp CCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 35689999999986 889999999999999999999765 568999999999999999966 678899999999
Q ss_pred EEeec
Q 006327 403 KLRAR 407 (650)
Q Consensus 403 ~~~~~ 407 (650)
.++..
T Consensus 80 ~~s~~ 84 (89)
T d1x4da1 80 HLSQK 84 (89)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 99754
No 158
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=5.5e-15 Score=121.01 Aligned_cols=74 Identities=12% Similarity=0.306 Sum_probs=65.8
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEe-----ecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEE
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLA-----RNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVK 403 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~-----~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~ 403 (650)
++|||+|||..+|+++|+++|++||.|..+.+. .+..+++++|||||+|.+.++|++|+. |||..|.|+.|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 589999999999999999999999988766553 345677899999999999999999985 99999999998885
No 159
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=3e-13 Score=113.18 Aligned_cols=76 Identities=13% Similarity=0.084 Sum_probs=67.0
Q ss_pred cceeeeecCCCCCC-CH----HHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeE
Q 006327 327 HVKTVFLDGVPPHW-KE----NQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSK 401 (650)
Q Consensus 327 ~~~~l~V~nLp~~~-t~----~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~ 401 (650)
..++|||+||+..+ ++ ++|+++|++||.|+.|.+++ ++++|||+|.+.++|.+||..|||..|.|+.|+
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 35789999999876 33 56999999999999999974 478999999999999999999999999999999
Q ss_pred EEEeecc
Q 006327 402 VKLRARL 408 (650)
Q Consensus 402 v~~~~~~ 408 (650)
|.|+...
T Consensus 78 v~~a~~~ 84 (104)
T d1weya_ 78 LYFAQTL 84 (104)
T ss_dssp EECCCCS
T ss_pred EeecccC
Confidence 9987543
No 160
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=5e-14 Score=117.98 Aligned_cols=77 Identities=18% Similarity=0.240 Sum_probs=71.8
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEe
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLR 405 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~ 405 (650)
...++|.+++..+++++|+++|++||.|..|.|+++ .+++++|||||+|.+.++|.+|+..|||+.|.|+.|.|++.
T Consensus 27 ~~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 27 VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred cchHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 356889999999999999999999999999999877 57899999999999999999999999999999999999874
No 161
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=1.8e-12 Score=110.36 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=65.9
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCH-HHHHHHHHHhCCCeeCCCeeEEEEeec
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTH-EAAVACINAINNKEFSDGNSKVKLRAR 407 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~-~~A~~Ai~~lng~~~~g~~i~v~~~~~ 407 (650)
..+||+|||..+|+++|+++|++||.|..|.|+++ +|||||+|.+. ++|..|+..||+..|.++.+.|.+.+.
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 45699999999999999999999999999999854 78999999985 789999999999999999888888653
No 162
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.31 E-value=5.2e-13 Score=111.67 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=67.9
Q ss_pred CCCCEEEEcCCCcCC-C----HHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcC
Q 006327 148 KKEHEIFIGGLDRDA-T----QEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRC 222 (650)
Q Consensus 148 ~~~~tlfV~nLp~~~-t----eedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i 222 (650)
....+|||+||+.++ + +++|+++|++||.|++|.+++ ++++|||+|.+.++|.+|+..||+..|.|+.|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 357899999999886 3 356999999999999999974 47899999999999999999999999999999
Q ss_pred CCCCCCCC
Q 006327 223 GTAPSEDN 230 (650)
Q Consensus 223 ~v~~~~~~ 230 (650)
.|.++...
T Consensus 77 ~v~~a~~~ 84 (104)
T d1weya_ 77 KLYFAQTL 84 (104)
T ss_dssp EEECCCCS
T ss_pred EEeecccC
Confidence 99887643
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.6e-12 Score=108.05 Aligned_cols=73 Identities=22% Similarity=0.312 Sum_probs=61.8
Q ss_pred cceeeeecC--CCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeC-CCeeEEE
Q 006327 327 HVKTVFLDG--VPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFS-DGNSKVK 403 (650)
Q Consensus 327 ~~~~l~V~n--Lp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~-g~~i~v~ 403 (650)
++++|+|.| ||..+|+++|+++|++||.|..|.++.+ ++||||+|.+.++|.+|+..|||+.|. +..+++.
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~~~~~~~i~ 90 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKIT 90 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEECTTSCEEE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCCCCCCcEEE
Confidence 356788855 9999999999999999999999998765 679999999999999999999999874 4444454
Q ss_pred Ee
Q 006327 404 LR 405 (650)
Q Consensus 404 ~~ 405 (650)
+.
T Consensus 91 ~~ 92 (101)
T d2cq2a1 91 LY 92 (101)
T ss_dssp CE
T ss_pred EE
Confidence 43
No 164
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=2.4e-13 Score=113.73 Aligned_cols=75 Identities=23% Similarity=0.306 Sum_probs=68.6
Q ss_pred EEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 152 EIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 152 tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
.|+|++++.+++++.|+++|++||.|++|+|+++ .+++++|+|||+|.+.++|.+|++.||+..+.|+.|.|..+
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 4667888888999999999999999999999877 68999999999999999999999999999999999987543
No 165
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=3.8e-12 Score=105.78 Aligned_cols=66 Identities=20% Similarity=0.386 Sum_probs=59.1
Q ss_pred cCCCCEEEEcC--CCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCccc
Q 006327 147 IKKEHEIFIGG--LDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVIC 218 (650)
Q Consensus 147 ~~~~~tlfV~n--Lp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~ 218 (650)
..+.++|+|.| ||.++|+++|+++|++||.|+.|.++.+ ++||||+|.+.++|.+|+..||+..|.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 44678999965 9999999999999999999999988654 679999999999999999999998763
No 166
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=4e-12 Score=108.09 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=61.5
Q ss_pred CCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCH-HHHHHHHHhccCCcccCCcCCCCC
Q 006327 150 EHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANK-EHAKRALTEMKNPVICGKRCGTAP 226 (650)
Q Consensus 150 ~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~-e~A~~Al~~l~~~~l~g~~i~v~~ 226 (650)
-..+||+|||..+|+++|+++|++||+|..|.|+++ +|||||.|.+. ++|..|+..|++..|.++.+.|.+
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~ 82 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW 82 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEE
Confidence 345699999999999999999999999999999744 79999999985 789999999999888877665433
No 167
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.21 E-value=4e-12 Score=100.70 Aligned_cols=73 Identities=14% Similarity=0.302 Sum_probs=61.6
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCc-CCCCCC
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKR-CGTAPS 227 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~-i~v~~~ 227 (650)
+.+.|+|.+||+++|++.| .+|++||+|.++++. ++++||||+|.+.++|++||+ +|+..|.|+. |.|.+.
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 3578999999999997555 689999999999873 458999999999999999996 8999999974 556665
Q ss_pred CC
Q 006327 228 ED 229 (650)
Q Consensus 228 ~~ 229 (650)
.+
T Consensus 75 ~~ 76 (81)
T d1wwha1 75 ID 76 (81)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 168
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.3e-11 Score=102.13 Aligned_cols=76 Identities=16% Similarity=0.383 Sum_probs=65.9
Q ss_pred ccceeeeecCC--CCCCC---------HHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCe
Q 006327 326 AHVKTVFLDGV--PPHWK---------ENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKE 394 (650)
Q Consensus 326 ~~~~~l~V~nL--p~~~t---------~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~ 394 (650)
..+++|+|+|| |.++. .++|++.|++||.|..|.+..+ ..+|||||+|.+.++|.+|+..|||+.
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 35689999999 54321 3689999999999999998765 467999999999999999999999999
Q ss_pred eCCCeeEEEEe
Q 006327 395 FSDGNSKVKLR 405 (650)
Q Consensus 395 ~~g~~i~v~~~ 405 (650)
|+|+.|.|.+.
T Consensus 82 ~~gr~i~v~~~ 92 (99)
T d2dita1 82 FGGRQITAQAW 92 (99)
T ss_dssp ETTEECEEEEC
T ss_pred ECCEEEEEEEe
Confidence 99999999985
No 169
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.1e-11 Score=102.50 Aligned_cols=81 Identities=19% Similarity=0.348 Sum_probs=69.3
Q ss_pred ccCCCCEEEEcCC--CcCC---------CHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccC
Q 006327 146 KIKKEHEIFIGGL--DRDA---------TQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKN 214 (650)
Q Consensus 146 ~~~~~~tlfV~nL--p~~~---------teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~ 214 (650)
+.+.+++|+|+|| |.++ .+++|++.|++||.|..|.+..+ ..+|+|||+|.+.++|.+|+..||+
T Consensus 4 ~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 4 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCC
Confidence 4568899999999 5443 23689999999999999998654 5689999999999999999999999
Q ss_pred CcccCCcCCCCCCCCC
Q 006327 215 PVICGKRCGTAPSEDN 230 (650)
Q Consensus 215 ~~l~g~~i~v~~~~~~ 230 (650)
..+.|++|.|......
T Consensus 80 ~~~~gr~i~v~~~~g~ 95 (99)
T d2dita1 80 RWFGGRQITAQAWDGT 95 (99)
T ss_dssp CEETTEECEEEECCSC
T ss_pred cEECCEEEEEEEeCCc
Confidence 9999999998876543
No 170
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=1.9e-11 Score=102.20 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=68.0
Q ss_pred cceeeeecCC--CCCCC--------HHHHHHHhcccCCeeEEEEeecCCC--CCcccEEEEEeCCHHHHHHHHHHhCCCe
Q 006327 327 HVKTVFLDGV--PPHWK--------ENQIRDQIKGYGDVIRIVLARNMST--AKRKDYGFIDFSTHEAAVACINAINNKE 394 (650)
Q Consensus 327 ~~~~l~V~nL--p~~~t--------~~~l~~~F~~~G~i~~v~i~~~~~~--~~~~G~afV~F~~~~~A~~Ai~~lng~~ 394 (650)
++++|.|.|| +..+. .++|++.|++||.|..|.|+++..+ ....|++||+|.+.++|.+|+..|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4678999999 44432 3679999999999999999886544 3456899999999999999999999999
Q ss_pred eCCCeeEEEEee
Q 006327 395 FSDGNSKVKLRA 406 (650)
Q Consensus 395 ~~g~~i~v~~~~ 406 (650)
|+|+.|.|.+..
T Consensus 83 f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 83 FANRVVVTKYCD 94 (104)
T ss_dssp SSSSCCEEEEEC
T ss_pred ECCeEEEEEEcC
Confidence 999999999853
No 171
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.12 E-value=4.9e-11 Score=94.26 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=56.2
Q ss_pred ceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCe
Q 006327 328 VKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGN 399 (650)
Q Consensus 328 ~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~ 399 (650)
.+.|+|.+||+.++++.| .+|++||.|..+.+. +.+|||||+|.+.++|++||+ +||..|+|+.
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~ 67 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALS-KDGRIFGESI 67 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHT-TTTCEETTTE
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHh-cCCCeECCcE
Confidence 367999999999987655 579999999999874 347899999999999999996 9999999985
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=8.5e-11 Score=98.09 Aligned_cols=80 Identities=15% Similarity=0.216 Sum_probs=67.5
Q ss_pred CCCCEEEEcCC--CcCC--------CHHHHHHHHhccCCeEEEEEEecCCC--CCCcceEEEEEeCHHHHHHHHHhccCC
Q 006327 148 KKEHEIFIGGL--DRDA--------TQEDVRKVFERIGEVIEVRLHKNFST--NRNKGYAFVKFANKEHAKRALTEMKNP 215 (650)
Q Consensus 148 ~~~~tlfV~nL--p~~~--------teedL~~~F~~~G~V~~v~l~~d~~t--g~~~G~afV~F~~~e~A~~Al~~l~~~ 215 (650)
.++++|.|.|| +.++ ..++|++.|++||.|++|.|.++..+ ....|++||+|.+.++|.+|++.|++.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 36889999999 4443 34679999999999999999876544 345689999999999999999999999
Q ss_pred cccCCcCCCCCC
Q 006327 216 VICGKRCGTAPS 227 (650)
Q Consensus 216 ~l~g~~i~v~~~ 227 (650)
.+.|+.|.+...
T Consensus 82 ~f~gR~v~v~f~ 93 (104)
T d1o0pa_ 82 KFANRVVVTKYC 93 (104)
T ss_dssp CSSSSCCEEEEE
T ss_pred EECCeEEEEEEc
Confidence 999999877654
No 173
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.96 E-value=0.00047 Score=52.79 Aligned_cols=53 Identities=9% Similarity=0.349 Sum_probs=47.9
Q ss_pred HHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEE
Q 006327 343 NQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKL 404 (650)
Q Consensus 343 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~ 404 (650)
.+|.+.|..||+|+-|+++.+ ...|+|.+-+.|.+|++ |+|.++.|+.|+|..
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISG 91 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEEC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEec
Confidence 578889999999999999876 58999999999999986 999999999988874
No 174
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.00032 Score=53.71 Aligned_cols=71 Identities=13% Similarity=0.228 Sum_probs=56.3
Q ss_pred cCCCCEEEEcCCCcCCCH---------HHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcc
Q 006327 147 IKKEHEIFIGGLDRDATQ---------EDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVI 217 (650)
Q Consensus 147 ~~~~~tlfV~nLp~~~te---------edL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l 217 (650)
-....||.|.=+..+..+ .+|.+.|..||+|.-|+++.+ ..+|+|.+-++|.+|+. +++..+
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v 82 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKV 82 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEE
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEE
Confidence 345667777544433333 368889999999999999876 69999999999999998 899999
Q ss_pred cCCcCCCCC
Q 006327 218 CGKRCGTAP 226 (650)
Q Consensus 218 ~g~~i~v~~ 226 (650)
+|+.|.+..
T Consensus 83 ~G~~l~It~ 91 (95)
T d1ufwa_ 83 KGRAVKISG 91 (95)
T ss_dssp TTEEEEEEC
T ss_pred cceEEEEec
Confidence 999887643
No 175
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.90 E-value=0.0014 Score=51.05 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=58.0
Q ss_pred CEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCC--CcceEEEEEeCHHHHHHHHHhccCCcccC
Q 006327 151 HEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNR--NKGYAFVKFANKEHAKRALTEMKNPVICG 219 (650)
Q Consensus 151 ~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~--~~G~afV~F~~~e~A~~Al~~l~~~~l~g 219 (650)
++|.|++||+.+|++++.+.+...|.+.....+..+.+-. .-.-|||.|.+.+++....+..++..+..
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 5799999999999999999999999998888876654422 22569999999999999999998877654
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.67 E-value=0.003 Score=49.12 Aligned_cols=70 Identities=14% Similarity=0.271 Sum_probs=59.0
Q ss_pred eeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCC--cccEEEEEeCCHHHHHHHHHHhCCCeeCCC
Q 006327 329 KTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAK--RKDYGFIDFSTHEAAVACINAINNKEFSDG 398 (650)
Q Consensus 329 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~--~~G~afV~F~~~~~A~~Ai~~lng~~~~g~ 398 (650)
++|.|+.||+.+|++++.+.+...+.+........+.+.+ .-..|+|.|.+.+++....+.++|+.|-+.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~ 73 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDN 73 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECT
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcC
Confidence 5899999999999999999999999988887766544322 234699999999999999999999988754
No 177
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.0057 Score=44.27 Aligned_cols=61 Identities=11% Similarity=0.224 Sum_probs=51.5
Q ss_pred HHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhCCCeeCCCeeEEEEee
Q 006327 343 NQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAINNKEFSDGNSKVKLRA 406 (650)
Q Consensus 343 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~lng~~~~g~~i~v~~~~ 406 (650)
+.|.+.|.+++.|..+.|..-.. + .=.|-|...+.++|.-|+..|+-+.|++++|.|.+..
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~d-g--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTD-Y--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCS-T--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccC-C--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 55778899999999999965522 2 2359999999999999999999999999999998763
No 178
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.19 E-value=0.0067 Score=43.90 Aligned_cols=60 Identities=22% Similarity=0.233 Sum_probs=49.8
Q ss_pred HHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCC
Q 006327 165 EDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPS 227 (650)
Q Consensus 165 edL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~ 227 (650)
+-|.+.|++++.|.++.|... ....-.|-|...+.++|.-|+..|+...|.+|+|.|..+
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~---~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~ 70 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPH---TDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLA 70 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSC---CSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred HHHHHHHHhheeEEEEEEEec---cCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 456778999999999999654 233456999999999999999999999999998877543
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.07 E-value=0.12 Score=39.86 Aligned_cols=57 Identities=19% Similarity=0.340 Sum_probs=47.2
Q ss_pred CCCEEEEcCCCcCCCHHHHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhcc
Q 006327 149 KEHEIFIGGLDRDATQEDVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMK 213 (650)
Q Consensus 149 ~~~tlfV~nLp~~~teedL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~ 213 (650)
...-||.-..|..+...||.++|+.||.|.--.| -+ | .|||.....++|+.+++.+.
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 4567899999999999999999999998854444 22 1 79999999999999887643
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.44 E-value=0.3 Score=37.54 Aligned_cols=57 Identities=18% Similarity=0.369 Sum_probs=45.6
Q ss_pred cceeeeecCCCCCCCHHHHHHHhcccCCeeEEEEeecCCCCCcccEEEEEeCCHHHHHHHHHHhC
Q 006327 327 HVKTVFLDGVPPHWKENQIRDQIKGYGDVIRIVLARNMSTAKRKDYGFIDFSTHEAAVACINAIN 391 (650)
Q Consensus 327 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~G~afV~F~~~~~A~~Ai~~ln 391 (650)
...-||.-.+|..+...+|.++|+.||.|.=-.| .+ | -|||...+.++|+.++..++
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 3467888889999999999999999998753333 33 1 59999999999999887554
No 181
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=29.30 E-value=1.1e+02 Score=23.10 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=54.4
Q ss_pred ceEEEEEeCHHHHHHHHHhccCCcccCCcCCCCCCCCCCcceeCCcCCCccHHHHHHHHhhcCCcceEEEEEeccccccC
Q 006327 193 GYAFVKFANKEHAKRALTEMKNPVICGKRCGTAPSEDNDTLFVGNICNTWTKEAIKQKLKDYGVEGVENINLVSDIQHEG 272 (650)
Q Consensus 193 G~afV~F~~~e~A~~Al~~l~~~~l~g~~i~v~~~~~~~~l~v~nLp~~~te~~l~~~F~~~G~~~i~~i~i~~d~~~~g 272 (650)
.|..+.|.+..+....+..... ..+.+.+.|.+.| .....+.+-.+..+
T Consensus 8 s~t~~dF~se~dmel~~~~~e~----------------------------~~~~~~~~Lk~~G---l~r~~~~~iwNk~~ 56 (109)
T d2od6a1 8 SFTTADFINDVDMELFIDAVEK----------------------------TAPVWVKEMKSRG---LLKFSMNRVWNKGE 56 (109)
T ss_dssp EEEEEEESSHHHHHHHHHHHHH----------------------------HHHHHHHHHHTTT---EEEEEEEEECSSSS
T ss_pred EEEEEEcCCHHHHHHHHHHHHH----------------------------HHHHHHHHHHHcC---CceEEEEEEeCCCC
Confidence 4677899999999999886431 2356777888888 55655555444577
Q ss_pred CCcceEEEEecCHHHHHHHHHHhC
Q 006327 273 LSRGFAFVMFSCHVDAMAAYKRLQ 296 (650)
Q Consensus 273 ~srG~aFV~F~~~e~A~~A~~~l~ 296 (650)
..+-...-+|++.++-.+|.+-+.
T Consensus 57 ~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 57 VFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHH
T ss_pred cEEEEEEEEECCHHHHHHHHHHHH
Confidence 777778889999999999987654
No 182
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=20.56 E-value=76 Score=24.36 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=29.1
Q ss_pred HHHHHHhccCCeEEEEEEecCCCCCCcceEEEEEeCHHHHHHHHHhcc
Q 006327 166 DVRKVFERIGEVIEVRLHKNFSTNRNKGYAFVKFANKEHAKRALTEMK 213 (650)
Q Consensus 166 dL~~~F~~~G~V~~v~l~~d~~tg~~~G~afV~F~~~e~A~~Al~~l~ 213 (650)
+|.+.+..+|. ++| || +-.++|+.|.+.++|.+|++.+.
T Consensus 61 ~~~~~L~~~g~---~~M-----SG-SGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 61 AVLSWLLEYAP---SRL-----TG-TGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHTTTSC---EEE-----CT-TSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHhhccc---cee-----cC-CCCEEEEEeCCHHHHHHHHHHcC
Confidence 56677778885 334 22 23479999999999999999874
Done!