Query 006328
Match_columns 650
No_of_seqs 219 out of 575
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 22:05:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z07_A Putative uncharacterize 100.0 6.6E-32 2.3E-36 290.1 26.5 344 162-602 2-418 (420)
2 3c68_A Uncharacterized protein 100.0 3.5E-31 1.2E-35 306.2 33.7 374 160-606 279-757 (761)
3 2jg0_A Periplasmic trehalase; 100.0 4.6E-30 1.6E-34 286.5 27.6 311 198-608 121-504 (535)
4 3qde_A Cellobiose phosphorylas 100.0 4.6E-30 1.6E-34 298.7 23.8 323 203-598 356-720 (811)
5 3rrs_A Cellobiose phosphorylas 100.0 7.8E-30 2.7E-34 297.1 22.3 323 203-598 363-733 (822)
6 1v7w_A Chitobiose phosphorylas 100.0 3.1E-29 1.1E-33 290.0 19.3 309 202-563 344-669 (807)
7 2okx_A Rhamnosidase B; alpha b 99.9 6.2E-22 2.1E-26 233.9 28.9 327 160-613 545-885 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 1.3E-20 4.4E-25 217.1 29.3 310 160-610 310-642 (739)
9 1lf6_A Glucoamylase; (alpha/al 99.8 1E-18 3.5E-23 200.1 25.1 353 160-607 293-667 (684)
10 1ulv_A Glucodextranase; GH fam 99.8 9.3E-19 3.2E-23 208.0 25.6 352 160-609 281-670 (1020)
11 1gai_A Glucoamylase-471; hydro 99.4 2E-10 6.9E-15 126.7 28.8 324 183-608 33-430 (472)
12 2fba_A Glucoamylase Glu1; (alp 99.4 1.1E-10 3.8E-15 129.3 26.9 333 182-607 47-486 (492)
13 2p0v_A Hypothetical protein BT 99.3 7.2E-11 2.5E-15 129.7 21.7 362 161-606 72-468 (489)
14 2vn4_A Glucoamylase; hydrolase 99.3 5.1E-10 1.8E-14 126.7 29.0 185 183-407 32-231 (599)
15 3p2c_A Putative glycosyl hydro 99.1 3.7E-09 1.3E-13 115.5 20.2 363 161-606 50-450 (463)
16 3qry_B Putative uncharacterize 99.0 4.1E-08 1.4E-12 106.3 24.4 361 160-602 24-418 (426)
17 3qt9_A Putative uncharacterize 99.0 4.6E-08 1.6E-12 106.0 22.8 360 160-603 27-419 (427)
18 1h54_A Maltose phosphorylase; 94.0 1.6 5.6E-05 50.6 18.6 85 291-377 429-515 (754)
19 2eab_A Alpha-fucosidase; glyco 93.3 1.1 3.9E-05 53.0 15.8 83 291-376 508-595 (899)
20 2rdy_A BH0842 protein; PSI-II, 90.0 0.91 3.1E-05 53.1 10.0 99 291-391 450-556 (803)
21 2gz6_A N-acetyl-D-glucosamine 86.2 18 0.00061 37.4 16.0 99 288-405 53-153 (388)
22 2zbl_A Putative isomerase; N-a 60.3 1.5E+02 0.005 31.3 14.9 247 294-606 56-328 (421)
23 1fp3_A N-acyl-D-glucosamine 2- 35.4 2.4E+02 0.0084 29.0 11.5 103 289-407 52-162 (402)
24 3k7x_A LIN0763 protein; Q92DQ0 32.7 2.3E+02 0.0077 29.5 10.7 103 285-404 147-250 (349)
25 1dl2_A Class I alpha-1,2-manno 28.9 2E+02 0.007 31.9 9.9 145 162-329 124-277 (511)
26 2ooa_A E3 ubiquitin-protein li 26.1 64 0.0022 25.3 3.7 28 204-232 23-50 (52)
27 2d9s_A CBL E3 ubiquitin protei 23.7 75 0.0026 25.0 3.7 28 204-232 21-48 (53)
28 3gt5_A N-acetylglucosamine 2-e 23.4 2.7E+02 0.0091 29.1 9.3 102 289-409 53-154 (402)
29 2zzr_A Unsaturated glucuronyl 22.4 7E+02 0.024 26.5 12.3 100 527-631 235-346 (397)
No 1
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.6e-32 Score=290.14 Aligned_cols=344 Identities=15% Similarity=0.105 Sum_probs=248.0
Q ss_pred hHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHHH-hhhhhhc
Q 006328 162 DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ-LQSWEKT 240 (650)
Q Consensus 162 ~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~~-LQ~~~~~ 240 (650)
+.+.++|+..|+. |.+..+++++ ..+|...|+||+.+.+++++.. +++.+++.|..++. .|.
T Consensus 2 ~~l~~~a~~~l~~-----n~~~~~~vP~-------~~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q~---- 64 (420)
T 2z07_A 2 APLRTKAVEVLQR-----NSRGAFTVPA-------HGLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQG---- 64 (420)
T ss_dssp -CHHHHHHHHHHH-----HBCSSCBCSS-------TTCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHCC----
T ss_pred hHHHHHHHHHHHH-----cCCCCCcCCC-------CCCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHh----
Confidence 4588999999998 5444455555 1489999999999999998765 68888887777665 553
Q ss_pred cCCCCCCCCCCCCcceeecccCCCCCCCcccccCCC-CCC-CccC-ccCCCChHHHHHHHHHHHHHHhCC----HhHHHh
Q 006328 241 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGE-AAIG-RVAPVDSGLWWIILLRAYGKCSGD----LLVQER 313 (650)
Q Consensus 241 ~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd-~Ge-~~~~-~ygsVDAtLWfIial~~Y~~~TGD----~~f~e~ 313 (650)
.+|.||+.+ -+...+. . .-.++ .|. .++. ++.++|.++++++++++|++.||| .+|+++
T Consensus 65 ------~~G~ip~~v--~~~~~~~-----y-~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~ 130 (420)
T 2z07_A 65 ------PDGMLPHIV--FHEQSRD-----Y-FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARY 130 (420)
T ss_dssp ------TTCCCCSEE--ECCSCCC-----C-C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred ------hCCCcceec--ccCCCcc-----c-CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHH
Confidence 789999833 2211110 0 00011 111 2222 457899999999999999999999 899875
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCccccc------CCC----cccccc----cC------C--------------------
Q 006328 314 IDVQTGIKMILKLCLADGFDMFPTLLVT------DGS----CMIDRR----MG------I-------------------- 353 (650)
Q Consensus 314 ~e~~~~i~~IL~~~l~~~f~~~~~lLv~------dG~----~w~D~r----~g------r-------------------- 353 (650)
+.+.|+..++|+...+- ...++++. +|. .|.|.. .+ |
T Consensus 131 --~~p~l~~~~~~~~~~~d-~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~ 207 (420)
T 2z07_A 131 --LFPKLLAFHRWLYHARD-PYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRY 207 (420)
T ss_dssp --HHHHHHHHHHHHHHHHC-TTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHH
T ss_pred --HHHHHHHHHHHHhcCCC-CCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHH
Confidence 78999999999875210 11223321 232 455430 00 1
Q ss_pred -----------------------CCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 006328 354 -----------------------HGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (650)
Q Consensus 354 -----------------------~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l 410 (650)
.+.||++||++|.+++.+++|++.++.. ++++.++++++++.|++ ||+++.+.
T Consensus 208 ~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~ 283 (420)
T 2z07_A 208 LSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF 283 (420)
T ss_dssp HHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred HHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence 1347899999999999999999875443 67789999999999999 99876655
Q ss_pred hhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHH
Q 006328 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLM 490 (650)
Q Consensus 411 ~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~~gLl~~eqa~~Vl~~i 490 (650)
+..|... . +...+ .....+.+++++++++++++++|++.+
T Consensus 284 ~~d~~~~-----------------------------~-----g~~~~------~~~~~~~~pL~~g~~~~~~a~~v~~~l 323 (420)
T 2z07_A 284 YFSWDLV-----------------------------A-----GEPIA------VKTSAGFLPLFAGTPHQGRASLLAQEA 323 (420)
T ss_dssp ECCEETT-----------------------------T-----TEECC------CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred eEeeeCC-----------------------------C-----CCeec------cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence 4332110 0 00001 124456778999999999999999998
Q ss_pred HHhhhhhh--cCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 006328 491 EAKWADLV--ADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLS 568 (650)
Q Consensus 491 ~~~~~eL~--tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~ 568 (650)
. +++ +++||++++| +++.++|.+||+|++||++.+.++.++.++|+.++|.+++......+.
T Consensus 324 ~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~ 387 (420)
T 2z07_A 324 E----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALME 387 (420)
T ss_dssp H----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred H----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 6 577 8999999998 455677889999999999999999999999999999888876555555
Q ss_pred cCCCCccccCCCCCccCCCCchhhHHhHHHHHHH
Q 006328 569 RDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVS 602 (650)
Q Consensus 569 ~~~~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a 602 (650)
..++.|.||+.+|.|.| |.+|+||+|.+|.+
T Consensus 388 ~~~~~E~yd~~~g~~~g---~~~fgWs~~~~l~l 418 (420)
T 2z07_A 388 REGFREYYDPLTGQGRG---GEGFSWSAALALFW 418 (420)
T ss_dssp HHCSEEEECTTTCCEEE---EESCHHHHHHHHHH
T ss_pred cCCeeeeeCCCCCCcCC---CCCCchHHHHHHHH
Confidence 56788999999987765 45999999998765
No 2
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=3.5e-31 Score=306.20 Aligned_cols=374 Identities=15% Similarity=0.095 Sum_probs=261.8
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccC--CCCCcCCCCCc--ccchhhHHHHHHHhhcCCHHHHHHHHHHHHHhh
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAAND--PTSSNVLNYDQ--VFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQ 235 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d--~~~a~~~nY~~--vwgRDt~Is~lglL~~G~peiar~~L~~l~~LQ 235 (650)
..+++..+|+..|+... ..+.|.+.... +. ++.+||.. .|+||+.+.+++++ ..+++++|++|+.|+.+|
T Consensus 279 ~~~~l~~~a~~tL~~n~----~~~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~-~~~~elAr~~L~~l~~~Q 352 (761)
T 3c68_A 279 EQTRVAVKAIETLNGNW----RSPGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMA-HFNPDIAKENIRAVFSWQ 352 (761)
T ss_dssp HHHHHHHHHHHHHHHTE----ECCBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHT-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhc----cCccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHH-HcCHHHHHHHHHHHHHhh
Confidence 45678899999888842 23344443210 11 56789998 99999999999876 458999999999999887
Q ss_pred hhhhccCCCCC-CCCCCCCcceeecccCCCCCCCcccccCCC-CCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHh
Q 006328 236 SWEKTMDCHSP-GQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER 313 (650)
Q Consensus 236 ~~~~~~d~~~~-~~GliP~~fki~h~~~r~~~~~~~~~l~pd-~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~ 313 (650)
.+. .|+++. .+|.||+.+ .+.+ .|+ +|+.+. ++.....+++|++++++|+++|||.+|+++
T Consensus 353 ~~~--~d~~r~~~~G~IP~~~--~~~~------------~p~r~g~~~~-~~~~~sqPPl~~~av~~yy~~tgD~~fL~e 415 (761)
T 3c68_A 353 IQP--GDSVRPQDVGFVPDLI--AWNL------------SPERGGDGGN-WNERNTKPSLAAWSVMEVYNVTQDKTWVAE 415 (761)
T ss_dssp CCT--TCSSCGGGTTCCCSBB--CSSC------------CGGGTSCCSS-CBCSCCCCCCHHHHHHHHHHHHCCHHHHHH
T ss_pred hhc--ccCCccCCCCEeeeee--ccCC------------cccccCcccc-ccCCCCCcHHHHHHHHHHHHHhCCHHHHHH
Confidence 432 244443 679999954 1110 111 122221 122223358899999999999999999985
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCccccc------------CC--------------------------------------
Q 006328 314 IDVQTGIKMILKLCLADGFDMFPTLLVT------------DG-------------------------------------- 343 (650)
Q Consensus 314 ~e~~~~i~~IL~~~l~~~f~~~~~lLv~------------dG-------------------------------------- 343 (650)
+.+.|+..++|+...+- ....+++. .|
T Consensus 416 --~~P~L~~~~~w~~~~rd-~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 492 (761)
T 3c68_A 416 --MYPKLVAYHDWWLRNRD-HNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQ 492 (761)
T ss_dssp --HHHHHHHHHHHHHHHSC-TTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHH
T ss_pred --HHHHHHHHHHHHHhCCC-CCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhh
Confidence 79999999999975321 00112110 01
Q ss_pred -----Cccccc-------------------------------ccCCCCC---------chhHHHHHHHHHHHHHHhhCCC
Q 006328 344 -----SCMIDR-------------------------------RMGIHGH---------PLEIQALFYSALLCAREMLAPE 378 (650)
Q Consensus 344 -----~~w~D~-------------------------------r~gr~G~---------pVEIQALwY~ALr~aaeL~~~~ 378 (650)
.+++|. ..+..|. +|++||+||.|++.+++|++.
T Consensus 493 ~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~- 571 (761)
T 3c68_A 493 VAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATI- 571 (761)
T ss_dssp HHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHH-
T ss_pred hhccccCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHH-
Confidence 012221 0022343 899999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCC
Q 006328 379 DGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPA 458 (650)
Q Consensus 379 ~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~ 458 (650)
.|+.+.++++.++++++++.|+++||+++.+.+..|....+... + + ..|.+.++
T Consensus 572 LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~~~~-----------~--------------~-~~g~~~sn 625 (761)
T 3c68_A 572 LGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLA-----------N--------------G-CAGKPIVE 625 (761)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSSCCT-----------T--------------S-CSSCBCGG
T ss_pred hCChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCCccc-----------c--------------c-cccceeec
Confidence 56778889999999999999999999987766543322100000 0 0 00000010
Q ss_pred ccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchh
Q 006328 459 HMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPT 538 (650)
Q Consensus 459 ~~d~r~~slGN~LAI~~gLl~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~ 538 (650)
+.+..+|++++++++++++++++|++.|.+. ..|.+++|+|+++| . ++.++|.+||||++||.
T Consensus 626 ----~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~--~----------~p~y~p~~yw~GpvW~~ 688 (761)
T 3c68_A 626 ----RGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL--T----------NPAFGADIYWRGRVWVD 688 (761)
T ss_dssp ----GCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCT--T----------CTTCCTTCTTTTCEEHH
T ss_pred ----chhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCC--C----------CcccCCCccccCCcccc
Confidence 1245678889999999999999999999862 26889999999999 2 45567789999999998
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH---hc-cCCCCccccCCCCCccCCCCchhhHHhHHHHHHHHHhh
Q 006328 539 LLWQFTVACIKMNRPEIAARAVQVAEKR---LS-RDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILL 606 (650)
Q Consensus 539 llg~~~~AllK~G~~~~A~~~L~~~e~~---l~-~~~~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL 606 (650)
..|+++.++.++|+.++|.+++..+... +. ...++|.||+.++.|.|+ .+|+||+|.+|.+....
T Consensus 689 ~~~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~G~---~~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 689 QFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGA---PNFSWSAAHLYMLYNDF 757 (761)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEESC---SSCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcCcC---CCchHHHHHHHHHHHHH
Confidence 8888899999999999999988655432 22 234899999999887755 49999999988776543
No 3
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.97 E-value=4.6e-30 Score=286.50 Aligned_cols=311 Identities=14% Similarity=0.158 Sum_probs=234.0
Q ss_pred CCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCC
Q 006328 198 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 277 (650)
Q Consensus 198 ~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~ 277 (650)
-+|..+|+||+.++++|++..|.++++|++|..|+.+|. ..|.||+..
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~---------------------- 168 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGN---------------------- 168 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBS----------------------
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCC----------------------
Confidence 599999999999999999999999999999999998875 468899821
Q ss_pred CCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhCCCCC-----------CCcc--ccc---
Q 006328 278 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDM-----------FPTL--LVT--- 341 (650)
Q Consensus 278 Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~~f~~-----------~~~l--Lv~--- 341 (650)
-.+|.+++.++.|++++++|+++|+| +|+++ +.+.++..++|....+-.. .+.+ +..
T Consensus 169 ----r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~--~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~ 241 (535)
T 2jg0_A 169 ----RSYYLSRSQPPFFALMVELLAQHEGD-AALKQ--YLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWD 241 (535)
T ss_dssp ----BGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHH--HHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCCC
T ss_pred ----CccCCCCCCccHHHHHHHHHHHcCCH-HHHHH--HHHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeecc
Confidence 12578888888899999999999886 88875 7999999999976533110 0111 110
Q ss_pred ---------------------C---CCcccccc---------cCC--------------CCCchhHHHHHHHHHHHHHHh
Q 006328 342 ---------------------D---GSCMIDRR---------MGI--------------HGHPLEIQALFYSALLCAREM 374 (650)
Q Consensus 342 ---------------------d---G~~w~D~r---------~gr--------------~G~pVEIQALwY~ALr~aaeL 374 (650)
+ ..+|+|.+ .+| ...|||+||+||+|++.+++|
T Consensus 242 ~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~l 321 (535)
T 2jg0_A 242 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARA 321 (535)
T ss_dssp SCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHH
Confidence 0 00122110 022 125799999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceecc
Q 006328 375 LAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGN 454 (650)
Q Consensus 375 ~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~ 454 (650)
++. .|+.+.+.++.++++.+++.|+++||+++.+.+..|...+ +
T Consensus 322 A~~-lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~----------------------------------~- 365 (535)
T 2jg0_A 322 SKA-AGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKS----------------------------------H- 365 (535)
T ss_dssp HHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTT----------------------------------T-
T ss_pred HHH-hCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCC----------------------------------C-
Confidence 986 5677788999999999999999999997766443321100 0
Q ss_pred ccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCC
Q 006328 455 LQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAG 534 (650)
Q Consensus 455 v~P~~~d~r~~slGN~LAI~~gLl~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGg 534 (650)
++. ..++..+.+.+++|+++++++++|++.+.+ +|+++.|||++++ .+.+||+|+
T Consensus 366 -~~~----~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~-----------------~s~~yW~Gp 420 (535)
T 2jg0_A 366 -KVR----NQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV-----------------KSGQQWDAP 420 (535)
T ss_dssp -EEC----CCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC-----------------CCSSSSSTT
T ss_pred -CEe----eeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC-----------------CCccccCCC
Confidence 111 123556677889999999999999999996 8999999999885 234899999
Q ss_pred -CchhhHHHHHHHHHHcCCHHHHHHHHHH----HHHHhc-cCCCCccccCCCCCccCC----CCchhhHHhHHHHHHHHH
Q 006328 535 -SWPTLLWQFTVACIKMNRPEIAARAVQV----AEKRLS-RDKWPEYYDTKRARFIGK----QAQLFQTWSIAGYLVSKI 604 (650)
Q Consensus 535 -vWP~llg~~~~AllK~G~~~~A~~~L~~----~e~~l~-~~~~pElFDG~~g~p~G~----~ac~~QAWSaA~~L~a~~ 604 (650)
+||++.++++.++.++|+.++|.++... +...+. .+.++|+|||.++.+.|. +.+.+|+||+|.+|.+..
T Consensus 421 NvW~~~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~ 500 (535)
T 2jg0_A 421 NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 500 (535)
T ss_dssp EECHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 9999999999999999999998776643 333332 256999999998765553 123699999999886666
Q ss_pred hhcC
Q 006328 605 LLAD 608 (650)
Q Consensus 605 lL~~ 608 (650)
...+
T Consensus 501 ~y~~ 504 (535)
T 2jg0_A 501 LICP 504 (535)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 5543
No 4
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.97 E-value=4.6e-30 Score=298.72 Aligned_cols=323 Identities=16% Similarity=0.121 Sum_probs=236.6
Q ss_pred ccc-hhhHHHHHHHhhcCCHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCc
Q 006328 203 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAA 281 (650)
Q Consensus 203 vwg-RDt~Is~lglL~~G~peiar~~L~~l~~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~ 281 (650)
-|| ||...-+++++.. +|+++|..|+.++..|. .+|.+|..+. |... -|...
T Consensus 356 ~~G~RD~~qd~~~~~~~-~p~~~r~~il~~~~~Q~----------~dG~~~h~~~----p~~~------------~g~~~ 408 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVHQ-IPERARERLLDLAATQL----------EDGSAYHQYQ----PLTK------------KGNNE 408 (811)
T ss_dssp CEEHHHHHHHHHTTTTT-CHHHHHHHHHHHHTTBC----------TTSCBCSEEC----TTTC------------CEECT
T ss_pred CCccHHHHHHHHHHHhc-CHHHHHHHHHHHHhhcc----------cCCCccceec----CCCC------------CCCCC
Confidence 566 9999999998754 79999999999986554 7899998551 1100 01111
Q ss_pred cCccCCCChHHHHHHHHHHHHHHhCCHhHHHhh-----------hHHHHHHHHHHHHHhCCCCCCCccccc-CCCccccc
Q 006328 282 IGRVAPVDSGLWWIILLRAYGKCSGDLLVQERI-----------DVQTGIKMILKLCLADGFDMFPTLLVT-DGSCMIDR 349 (650)
Q Consensus 282 ~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~-----------e~~~~i~~IL~~~l~~~f~~~~~lLv~-dG~~w~D~ 349 (650)
+ .+..+|.+||+|+++++|++.|||.+|+++. .+.++++.++++++.. ++ +.+|.. ...+|+|.
T Consensus 409 ~-~~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g--~~GL~~~g~~DWnD~ 484 (811)
T 3qde_A 409 I-GSNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN-LG--PHGLPLIGRADWNDC 484 (811)
T ss_dssp T-CCCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC-BC--TTSSBBCBTCSSSTT
T ss_pred C-CCCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc-CC--CCCCcccccCCchhh
Confidence 1 1456999999999999999999999998641 3678899999998752 12 233332 34578875
Q ss_pred c--------c-----------CCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 006328 350 R--------M-----------GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (650)
Q Consensus 350 r--------~-----------gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l 410 (650)
- + ++.|.+|++++|||+||+.+++|++. .++.+.++++++++++|++.|+++||+. . .
T Consensus 485 ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~-lGd~~~A~~~~~~A~~lk~a~~~~~Wdg-~-~ 561 (811)
T 3qde_A 485 LNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEY-MGLEEEARKAQQHIDAMKEAILKYGYDG-E-W 561 (811)
T ss_dssp CCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHSBCS-S-S
T ss_pred ccccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCc-C-e
Confidence 2 1 25789999999999999999999986 5678889999999999999999999964 1 1
Q ss_pred hhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceec--cccCCccccccccccchhhhhcCCCCHH-HHHHHH
Q 006328 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIG--NLQPAHMDFRFFSLGNIWSIVNGLATRD-QSHAIL 487 (650)
Q Consensus 411 ~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g--~v~P~~~d~r~~slGN~LAI~~gLl~~e-qa~~Vl 487 (650)
+.. .+..+| -.++ ..++++ +++.++.+++++|+++++ |++++|
T Consensus 562 y~r-----------------------------a~~~dg-~~~gs~~~~~~q----i~~~~q~~avlsGia~~e~ra~~~m 607 (811)
T 3qde_A 562 FLR-----------------------------AYDDFG-RKVGSKENEEGK----IFIESQGFCVMAEIGLEDGKALKAL 607 (811)
T ss_dssp BCC-----------------------------EECTTS-CEESSTTSSSCC----EESHHHHHHHHTTCSSSSSHHHHHH
T ss_pred EEE-----------------------------EEcCCC-CCCCccCCCCce----EEecchhHHHHhCCCCchHHHHHHH
Confidence 111 000111 1111 122333 457777789999999999 999999
Q ss_pred HHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 006328 488 DLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRL 567 (650)
Q Consensus 488 ~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l 567 (650)
+.|.+ +|++|+|||+++||+....+.+ +.-..+.|.+||||++|||.....+.|+.|+|+.++|.+++..+....
T Consensus 608 ~~v~~---~L~t~~Glrll~p~f~~~~~d~--g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~ 682 (811)
T 3qde_A 608 DSVKK---YLDTPYGLVLQNPAFTRYYIEY--GEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAY 682 (811)
T ss_dssp HHHHH---HHCCTTCCCSEESCCCSCCTTT--GGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGG
T ss_pred HHHHH---HhCCCcceEeecCCccccCCCC--CceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhh
Confidence 99998 8999999999999865332211 222457899999999999997777778889999999999997764422
Q ss_pred c------cCCCCccccCCCC-CccCCCCchhhHHhHHH
Q 006328 568 S------RDKWPEYYDTKRA-RFIGKQAQLFQTWSIAG 598 (650)
Q Consensus 568 ~------~~~~pElFDG~~g-~p~G~~ac~~QAWSaA~ 598 (650)
. ....||+|+|... ......+|.+|+|..|+
T Consensus 683 ~~~~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~tGs 720 (811)
T 3qde_A 683 IEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGT 720 (811)
T ss_dssp SGGGHHHHCSCTTSCEEEECCTTSTTTTCEEEESCSTH
T ss_pred hcchhhhcCcCcEEeccccccccCCCCCCCcchhHHHH
Confidence 2 2458999998652 11123466699997655
No 5
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.97 E-value=7.8e-30 Score=297.08 Aligned_cols=323 Identities=17% Similarity=0.115 Sum_probs=235.5
Q ss_pred ccc-hhhHHHHHHHhhcCCHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCc
Q 006328 203 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAA 281 (650)
Q Consensus 203 vwg-RDt~Is~lglL~~G~peiar~~L~~l~~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~ 281 (650)
-|| ||...-+++++.. +|+++|..|+.++..|. .+|.+|..+. |.. ..|...
T Consensus 363 ~~G~RD~~qd~~~~~~~-~pe~ar~~il~~~~~Q~----------~dG~v~h~~~----p~~------------~~g~~~ 415 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVHL-IPERARERIIDIASTQF----------ADGSAYHQYQ----PLT------------KRGNND 415 (822)
T ss_dssp CEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHTTCC----------TTSCCCSEEE----TTT------------TEECTT
T ss_pred CCchHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhc----------ccCcccceec----CcC------------CCCccC
Confidence 466 9999999998754 79999999999986554 7899999551 111 001111
Q ss_pred cCccCCCChHHHHHHHHHHHHHHhCCHhHHHhh-----------hHHHHHHHHHHHHHhCCCCCCCccccc-CCCccccc
Q 006328 282 IGRVAPVDSGLWWIILLRAYGKCSGDLLVQERI-----------DVQTGIKMILKLCLADGFDMFPTLLVT-DGSCMIDR 349 (650)
Q Consensus 282 ~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~-----------e~~~~i~~IL~~~l~~~f~~~~~lLv~-dG~~w~D~ 349 (650)
+ .+..+|.+||+|+++++|++.|||.+|+++. .+.++++.++++++.. + .+.+|.. ...+|+|.
T Consensus 416 ~-~~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~--g~~GLp~~g~gDWnD~ 491 (822)
T 3rrs_A 416 I-GSGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTH-R--GPHGLPLIGRADWNDC 491 (822)
T ss_dssp T-CSCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHS-B--CTTSSBBCBTCSSSTT
T ss_pred C-CCcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhc-C--CCCCCcccCCCcchhh
Confidence 1 1456999999999999999999999998641 3677899999998852 1 2233333 24578875
Q ss_pred c--------c-----------CCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 006328 350 R--------M-----------GIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL 410 (650)
Q Consensus 350 r--------~-----------gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l 410 (650)
- + ++.|.+|++++|||+||+.+++|++. .|+.+.+++++++|++|+++|+++||+.. .
T Consensus 492 ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~-~G~~~~A~~~~~~A~~lk~a~~~~~Wdg~--~ 568 (822)
T 3rrs_A 492 LNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAAR-RGLADVADRARGHVAEMRDALLTDGWDGS--W 568 (822)
T ss_dssp CCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHTTTBCSS--S
T ss_pred cccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHHHhccCcc--e
Confidence 2 1 25789999999999999999999986 57788899999999999999999999641 1
Q ss_pred hhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceec--cccCCccccccccccchhhhhcCCCCHH-------
Q 006328 411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIG--NLQPAHMDFRFFSLGNIWSIVNGLATRD------- 481 (650)
Q Consensus 411 ~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g--~v~P~~~d~r~~slGN~LAI~~gLl~~e------- 481 (650)
+.. .+..+|. .+| ..++++ +++.+..+++++|+++++
T Consensus 569 y~r-----------------------------a~d~dg~-~~gs~~~~~~~----i~~~~q~~avlsGia~~e~~~~~~~ 614 (822)
T 3rrs_A 569 FLR-----------------------------AYDYYGN-PIGTDAHDEGK----IWIEPQGFAVMAGVGVGEGPQDTDA 614 (822)
T ss_dssp BCC-----------------------------EECTTSC-EESCTTSSSCC----EEHHHHHHHHHTTTTCCSSTTCTTS
T ss_pred eEE-----------------------------EEcCCCC-CccccCCCCce----EEeccchhHhhcCCCCcccccchHH
Confidence 111 0001111 111 112333 456666778999999999
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHH
Q 006328 482 QSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQ 561 (650)
Q Consensus 482 qa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~ 561 (650)
+++++|+.|.+ +|++|+|||+++||+... ..-.+.-..+.|.+||||++|||.....+.|+.++|+.++|.+++.
T Consensus 615 ~a~~al~~v~~---~L~t~~Girll~p~f~~~--~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~ 689 (822)
T 3rrs_A 615 PAIKALDSVNE---MLATDHGMVLQYPAYTTY--QVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYK 689 (822)
T ss_dssp HHHHHHHHHHH---HTEETTEEBSEESCCSSC--CTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHH---HcCCCCeEEEcCCCcccc--cCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999998 899999999999986421 1222334457899999999999997777778889999999999987
Q ss_pred HHHHHh------ccCCCCccccCCCC-CccCCCCchhhHHhHHH
Q 006328 562 VAEKRL------SRDKWPEYYDTKRA-RFIGKQAQLFQTWSIAG 598 (650)
Q Consensus 562 ~~e~~l------~~~~~pElFDG~~g-~p~G~~ac~~QAWSaA~ 598 (650)
.+.... .....||+|+|... ......+|.+|+|..|+
T Consensus 690 ~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tGs 733 (822)
T 3rrs_A 690 RITPAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTGT 733 (822)
T ss_dssp HHCHHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSSTH
T ss_pred HhCcccccchhHhhccCcEEEeccccccCCCCCCCccchhhhhh
Confidence 653321 12358999998652 11123466799997665
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.96 E-value=3.1e-29 Score=290.05 Aligned_cols=309 Identities=16% Similarity=0.098 Sum_probs=213.6
Q ss_pred cccc-hhhHHHHHHHhhcCCHHHHHHHHHHHHHhhhhhhccCCCCCCCC-CCCCcceeecccCCCCC-CCcccccCCCCC
Q 006328 202 QVFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQG-LMPASFKVRTVPLDGDD-SATEEVLDPDFG 278 (650)
Q Consensus 202 ~vwg-RDt~Is~lglL~~G~peiar~~L~~l~~LQ~~~~~~d~~~~~~G-liP~~fki~h~~~r~~~-~~~~~~l~pd~G 278 (650)
..|| ||++|++++++ .++|+++|++|+.++..|. .+| ++|..+...++|..+.. ......++++.|
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~----------~~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~ 412 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQV----------KAGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPS 412 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBC----------TTSCBCSEECGGGGCC------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccc----------cCCCcceeeeeccccccccccCCccccccccCCC
Confidence 4699 99999999866 8899999999999998775 345 45653211111100000 000000011111
Q ss_pred C----CccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhh---------hHHHHHHHHHHHHHhCCCCCCCccccc-CCC
Q 006328 279 E----AAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERI---------DVQTGIKMILKLCLADGFDMFPTLLVT-DGS 344 (650)
Q Consensus 279 e----~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~---------e~~~~i~~IL~~~l~~~f~~~~~lLv~-dG~ 344 (650)
+ .++ .....|+++||++++++|+++|||.+|+++. .+..+|+.+++|+... . .+.+++. ...
T Consensus 413 ~~~~~~g~-~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~-~--~~~GL~~~~~~ 488 (807)
T 1v7w_A 413 DEDKIHGI-KDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEY-V--GQTGICKGLRA 488 (807)
T ss_dssp ----CCCG-GGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS-B--CTTSCBEEETC
T ss_pred cchhhcCC-CCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhc-C--CCCCCcccCCC
Confidence 1 111 1233499999999999999999999998862 2344799999999862 1 2234433 245
Q ss_pred cccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhh
Q 006328 345 CMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYD 424 (650)
Q Consensus 345 ~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~ 424 (650)
+|.|.--+..|.++|+|||||.||+.+++|++. .|+.+.++++++++++|++.|+++||+++.+.+... |
T Consensus 489 DW~D~~~~~~g~~v~~~a~~y~al~~~a~la~~-lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~------~--- 558 (807)
T 1v7w_A 489 DWNDCLNLGGGESSMVSFLHFWALQEFIDLAKF-LGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRG------L--- 558 (807)
T ss_dssp SSSTTCCCEEEEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCE------E---
T ss_pred CCCCcCCCCCCeehhHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeee------e---
Confidence 897752112789999999999999999999986 567788999999999999999999998754332211 0
Q ss_pred hhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCc
Q 006328 425 AVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLK 504 (650)
Q Consensus 425 a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~~gLl~~eqa~~Vl~~i~~~~~eL~tp~pLR 504 (650)
..++.. .+... ..+.+.++.+|.+||++|+++++|++++++.|.+ .|.++.|+|
T Consensus 559 --------------------~~d~~~-~g~~~--~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~G~~ 612 (807)
T 1v7w_A 559 --------------------TKNGDK-IGTAQ--QQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLH 612 (807)
T ss_dssp --------------------CTTSCE-ESCTT--CSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEEC
T ss_pred --------------------ccCCCC-cCCcc--CCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCCcee
Confidence 000000 01000 0122356678888999999999999999999998 898999999
Q ss_pred cccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 006328 505 ICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVA 563 (650)
Q Consensus 505 tl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~ 563 (650)
+++||+..... ..+.-..+.|..||||++|||....++.|+.++|+.++|.+++..+
T Consensus 613 ~~~p~~~~~~~--~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~ 669 (807)
T 1v7w_A 613 LNAPSFSTPND--DIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDAL 669 (807)
T ss_dssp SEESCCCSCCT--TTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ecCCcccccCc--CCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 99997642211 1112234678899999999999888899999999999999998765
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.90 E-value=6.2e-22 Score=233.93 Aligned_cols=327 Identities=14% Similarity=0.098 Sum_probs=228.8
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHHh-hcCCHHHHHHHHHHHHHhhhhh
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWE 238 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL-~~G~peiar~~L~~l~~LQ~~~ 238 (650)
.+|++++.++..|+..+..+ | .-+ .-.....|.||+.+++++++ ..|+++++|+.|..++..|.
T Consensus 545 ~lN~l~~~a~~tl~~n~~~~---~---tD~-------p~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q~-- 609 (956)
T 2okx_A 545 LLNATWEISRHTTRLCMEDT---F---VDC-------PSYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSAD-- 609 (956)
T ss_dssp HHHHHHHHHHHHHHHTBSSS---B---CSC-------TTTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGTT--
T ss_pred HHHHHHHHHHHHHHHhcccC---c---cCC-------CcccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc--
Confidence 47788888888888854322 1 111 11134589999999999985 57899999999999876553
Q ss_pred hccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhHHH
Q 006328 239 KTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQT 318 (650)
Q Consensus 239 ~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~~~ 318 (650)
.+|.+|..+ |+.. .....|.++||++++++|+++|||.+|+++ +.+
T Consensus 610 --------~dG~ip~~~-------------------p~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e--~yp 655 (956)
T 2okx_A 610 --------ETPLYLDQV-------------------PSAW-----SSVIPNWTFFWILACREYAAHTGNEAFAAR--IWP 655 (956)
T ss_dssp --------TCTTCCSBS-------------------SCSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHH--HHH
T ss_pred --------cCCCcCccc-------------------cccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHHHH--HHH
Confidence 679999844 1110 124568899999999999999999999875 799
Q ss_pred HHHHHHHHHHhCCCCCCCccccc--C--CCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHH
Q 006328 319 GIKMILKLCLADGFDMFPTLLVT--D--GSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVA 394 (650)
Q Consensus 319 ~i~~IL~~~l~~~f~~~~~lLv~--d--G~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~ 394 (650)
.|+.+++|+.... + +.+++. . -.+|.|..-++.|.++..|+|+|.||+.+++|++. .++.+.++++++++++
T Consensus 656 ~lk~~l~~~~~~~-d--~~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~-LG~~~~a~~y~~~A~~ 731 (956)
T 2okx_A 656 AVKHTLTHYLEHI-D--DSGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAA-AGATEEADAFAARADL 731 (956)
T ss_dssp HHHHHHHHHHTTB-C--TTSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHH-TTCGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-C--CCCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 9999999998631 1 233332 1 24788763257888999999999999999999986 5566678889999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhh
Q 006328 395 LSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIV 474 (650)
Q Consensus 395 L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~ 474 (650)
|++.|+++||.+..+++..+ +.+.-.|.. .....+|+++++
T Consensus 732 lk~ai~~~~wd~~~g~y~d~------------------------------------~~~~g~~~~---~~~~~s~~lall 772 (956)
T 2okx_A 732 LAETINAVLWDEEKRAYIDC------------------------------------IHADGRRSD---VYSMQTQVVAYL 772 (956)
T ss_dssp HHHHHHHHSEETTTTEECSE------------------------------------ECTTSCBCC---CCBHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEee------------------------------------ecCCCCccc---ccccHHHHHHHH
Confidence 99999999998765443221 000001110 112457788999
Q ss_pred cCCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCccccc-CCCchhhHHHHHHHHHHcCCH
Q 006328 475 NGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHN-AGSWPTLLWQFTVACIKMNRP 553 (650)
Q Consensus 475 ~gLl~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHN-GgvWP~llg~~~~AllK~G~~ 553 (650)
+|+++++++++| +.+.+ +. |.+||+ |++||+ +.++.|+.++|+.
T Consensus 773 ~Gl~p~~~~~av-~~Ll~-------~~-------------------------~~gy~~~Gt~w~~--~~li~aLar~G~~ 817 (956)
T 2okx_A 773 CGVAQGEREAVI-EGYLS-------SP-------------------------PPAFVQIGSPFMS--FFYYEALEKAGRQ 817 (956)
T ss_dssp TTCSCHHHHHHH-HHHHH-------SC-------------------------CTTSBCCCSHHHH--HHHHHHHHHTTCH
T ss_pred hCCCCHHHHHHH-HHHhc-------CC-------------------------CcccccCCChhHH--HHHHHHHHHCCCH
Confidence 999999998877 33332 10 347887 999997 6677888899999
Q ss_pred HHHHHHHHHHHH-Hhcc--CCCCccccCCCCCcc---CCCCchhhHHhHHHHHHHHHhhc--CCCCcc
Q 006328 554 EIAARAVQVAEK-RLSR--DKWPEYYDTKRARFI---GKQAQLFQTWSIAGYLVSKILLA--DPSAAK 613 (650)
Q Consensus 554 ~~A~~~L~~~e~-~l~~--~~~pElFDG~~g~p~---G~~ac~~QAWSaA~~L~a~~lL~--~p~~~~ 613 (650)
++|.+++...-. .... ..++|.||+.++... +...+..|+|++|....+.+.+- .|...+
T Consensus 818 d~A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~pG 885 (956)
T 2okx_A 818 TLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGADG 885 (956)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSGG
T ss_pred HHHHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCcHHHHHHHHHHHHHhcCccccCCC
Confidence 999999854332 2222 248999998663211 12113369999987555555433 454333
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.87 E-value=1.3e-20 Score=217.14 Aligned_cols=310 Identities=16% Similarity=0.190 Sum_probs=215.0
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCC-CcccchhhHHHHHHHh-hcCCHHHHHHHHHHHHHhhhh
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNY-DQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSW 237 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY-~~vwgRDt~Is~lglL-~~G~peiar~~L~~l~~LQ~~ 237 (650)
.+|++++.++..++..+.. .| +-+ |-+ ...|..|+.|+++..+ ..++++++++.|..+ |
T Consensus 310 ~lN~i~~~~~~t~~~n~~~---~~---~Dc--------P~RER~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~-- 370 (739)
T 3cih_A 310 ELNCIWEVGAYTMHLTTRE---FF---IDG--------IKRDRWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R-- 370 (739)
T ss_dssp HHHHHHHHHHHHHHHTBSS---SB---CSB--------SSSCCCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H--
T ss_pred HHHHHHHHHHHHHHHhccC---CC---ccC--------cccccceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c--
Confidence 4677888888888774321 12 111 222 4599999999998865 467899999887544 2
Q ss_pred hhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCC-CChHHHHHHHHHHHHHHhCCHhHHHhhhH
Q 006328 238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAP-VDSGLWWIILLRAYGKCSGDLLVQERIDV 316 (650)
Q Consensus 238 ~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygs-VDAtLWfIial~~Y~~~TGD~~f~e~~e~ 316 (650)
|.+|.. + ++++ +|.++||++++++|+++|||.+|+++ +
T Consensus 371 -----------g~~p~~--------------------~--------~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e--~ 409 (739)
T 3cih_A 371 -----------GKDPVT--------------------S--------HSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQ--L 409 (739)
T ss_dssp -----------CCSSCC--------------------S--------SGGGBHHHHHHHHHHHHHHHHHHCCHHHHHH--H
T ss_pred -----------cCCCCc--------------------c--------ccCCccchhHHHHHHHHHHHHHhCCHHHHHH--H
Confidence 223430 0 1233 68999999999999999999999875 8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccccc--CC----CcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHH
Q 006328 317 QTGIKMILKLCLADGFDMFPTLLVT--DG----SCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNN 390 (650)
Q Consensus 317 ~~~i~~IL~~~l~~~f~~~~~lLv~--dG----~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ 390 (650)
.+.|+.+++|+.... .+.+++. .| .+|+|..+++.|.++++|+|||.||+.+++|++. .|+.+.++++++
T Consensus 410 ~p~l~~~ld~~~~~~---d~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~-lG~~~~A~~y~~ 485 (739)
T 3cih_A 410 YPRMQTMMDYVLGRT---NKNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADL-VGDKDGQQKYEK 485 (739)
T ss_dssp HHHHHHHHHHHHTTB---CTTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---CCCCCcccCCCCcccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHH
Confidence 999999999998631 1233432 23 3788866788999999999999999999999986 567788999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccch
Q 006328 391 RLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNI 470 (650)
Q Consensus 391 ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~ 470 (650)
++++|++.|+++||+++.+.+.. +..+....|. ....+|+
T Consensus 486 ~A~~lk~a~~~~~wd~~~G~y~~---------------------------------------~~~~G~~~d~-~~~~s~~ 525 (739)
T 3cih_A 486 LASALKAKLEPTFWNNQKQAFVH---------------------------------------NCVDGRQSDA-VTRYANM 525 (739)
T ss_dssp HHHHHHHHHHHHHEETTTTEECS---------------------------------------EEETTEECSC-CCHHHHH
T ss_pred HHHHHHHHHHHhccCcccCeeEe---------------------------------------ecCCCCcCcc-cchHHhH
Confidence 99999999999999865432221 1111000110 1234678
Q ss_pred hhhhcCCCCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHc
Q 006328 471 WSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKM 550 (650)
Q Consensus 471 LAI~~gLl~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~ 550 (650)
+||++|+++++++++|++.+..+ + ..||+| |||+.+.++.|+.++
T Consensus 526 laL~~Gl~~~e~~~~v~~~L~~~--------------~-------------------~~~~~~--tp~~~~~~~~aL~~~ 570 (739)
T 3cih_A 526 FSVFFDYLNADKQQAIKQSVLLN--------------D-------------------EILKIT--TPYMRFYELEALCAL 570 (739)
T ss_dssp HHHHTTCSCHHHHHHHHHHTTTC--------------T-------------------TSCCCC--SHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCHHHHHHHHHHHhcC--------------c-------------------cccccc--chhHHHHHHHHHHHc
Confidence 89999999999999888766431 0 125777 689988899999999
Q ss_pred CCHHHHHHHHHHH-HHHhccC--CCCccccCCCCC---c------cCCCCchhhHHhHHH-HHHHHHhhc-CCC
Q 006328 551 NRPEIAARAVQVA-EKRLSRD--KWPEYYDTKRAR---F------IGKQAQLFQTWSIAG-YLVSKILLA-DPS 610 (650)
Q Consensus 551 G~~~~A~~~L~~~-e~~l~~~--~~pElFDG~~g~---p------~G~~ac~~QAWSaA~-~L~a~~lL~-~p~ 610 (650)
|+.++|.+++... ...+... .++|.||+.... + .+...|. +|+++. ..+...++- .|.
T Consensus 571 G~~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~H--aW~ag~~~~l~~~ilGI~p~ 642 (739)
T 3cih_A 571 GEQETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCH--AWGASPIYLLGKYYLGVKPT 642 (739)
T ss_dssp TCHHHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSB--GGGCTHHHHHHHHTSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCCCceeEEecccccCCcccccccccccCccccc--ccccchHHHHHHHHhccCcC
Confidence 9999999988543 3333322 388999986311 1 1223344 799874 333444443 454
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.82 E-value=1e-18 Score=200.08 Aligned_cols=353 Identities=14% Similarity=0.082 Sum_probs=226.2
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCC-------CcCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHH
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTS-------SNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~-------a~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~ 232 (650)
..+.++.+++..|+.+. ..+|.|.+.|+...+ .....|.-+|+||+.+++.+++..|++++++.+|..++
T Consensus 293 ~~~~~~~rs~~~Lk~l~---~~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~ 369 (684)
T 1lf6_A 293 KANSLYYNSMMILKASE---DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLA 369 (684)
T ss_dssp TCCHHHHHHHHHHHTTB---CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CCCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 55788999999998853 124667774432110 01236889999999999999998899999999999999
Q ss_pred HhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHH
Q 006328 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (650)
Q Consensus 233 ~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e 312 (650)
..|.. +|-++..+.+ + | .|..| -...|++..+|+++..|. .+|
T Consensus 370 ~~q~~----------~G~~~~~~~~-----~-----G----~p~w~------~~Q~D~~g~~l~~~~~~~-~~g------ 412 (684)
T 1lf6_A 370 KVVKD----------NGMIPQNTWI-----S-----G----KPYWT------GIQLDEQADPIILSYRLK-RYD------ 412 (684)
T ss_dssp HHHHH----------HSSCCSCBCT-----T-----S----CBCCC------CCCHHHHHHHHHHHHHTT-CGG------
T ss_pred hhcCC----------CCCcccceeC-----C-----C----CcccC------CccccchHHHHHHHHHHH-HcC------
Confidence 88762 3444443311 0 1 01111 235899999999998554 444
Q ss_pred hhhHHHH-HHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 006328 313 RIDVQTG-IKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNR 391 (650)
Q Consensus 313 ~~e~~~~-i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~r 391 (650)
+.+. ++.+++|+...+ -.++...|-++ .|.-..+.++.|.||+++++|++. .++.+.++++.+.
T Consensus 413 ---~~~~~v~~al~~i~~~~-------~~~~~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~-~g~~~~a~~~~~~ 477 (684)
T 1lf6_A 413 ---LYDSLVKPLADFIIKIG-------PKTGQERWEEI----GGYSPATMAAEVAGLTCAAYIAEQ-NKDYESAQKYQEK 477 (684)
T ss_dssp ---GTTTTHHHHHHHHHHHC-------SSBSSCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ---chHHHHHHHHHHHHHhC-------CCCCccccccc----CCcCHHHHHHHHHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 3455 888888887632 23454568876 366678899999999999999986 5677889999999
Q ss_pred HHHHHHHHHHHhhhhh-----hhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCc-ceeccccCC-cccccc
Q 006328 392 LVALSFHIREYYWIDL-----RKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGG-YLIGNLQPA-HMDFRF 464 (650)
Q Consensus 392 a~~L~~~~~~~FW~d~-----~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~gg-YL~g~v~P~-~~d~r~ 464 (650)
+++|+..|+++||+++ ++.+... ++|. -++.|+ +...+-.+. ..+...
T Consensus 478 a~~i~~~i~~~~w~~~~~~g~~~~f~r~-----------------~~d~--------~~~~~~~~~~~~~~~~~~~~~~l 532 (684)
T 1lf6_A 478 ADNWQKLIDNLTYTENGPLGNGQYYIRI-----------------AGLS--------DPDADFMINIANGGGVYDQKEIV 532 (684)
T ss_dssp HHHHHHHHHHHHEESSCSSTTSCEECSC-----------------BSSS--------CTTSCCEEEETTTTEEEEGGGCC
T ss_pred HHHHHHHHHHhccCCCcccccCCeeEEE-----------------eccC--------CCccccccccccccccCCCCCcE
Confidence 9999999999999875 2222110 0000 000000 111110000 001112
Q ss_pred ccccch-hhhhcCCCCHH--HHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCccc-cc--CCCchh
Q 006328 465 FSLGNI-WSIVNGLATRD--QSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSY-HN--AGSWPT 538 (650)
Q Consensus 465 ~slGN~-LAI~~gLl~~e--qa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SY-HN--GgvWP~ 538 (650)
++ ++ +++++|+++++ +....++.|++ +|...+|-...+.-+...+|... .+...| |+ |++||.
T Consensus 533 Da--s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~~~~RY~~d~y~~~------~~G~~f~~~g~g~~W~~ 601 (684)
T 1lf6_A 533 DP--SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRYNHDGYGEP------SKTELYHGAGKGRLWPL 601 (684)
T ss_dssp CG--GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSSTTCCCSCS------BTTBCCSSSSCCCBBHH
T ss_pred eH--HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEeccCCCCCCcc------cCCCccccCCCCCchHH
Confidence 22 33 35689988655 78888888886 55322110000000001111110 111223 35 799999
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHHHHhhc
Q 006328 539 LLWQFTVACIKMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA 607 (650)
Q Consensus 539 llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~ 607 (650)
....++.++++.|+ +|.++++.+..+-...+ +||-||+.+|+|.|. |.|||||.|++|.+...+.
T Consensus 602 ~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G~--a~PqaWSha~~i~~~~~l~ 667 (684)
T 1lf6_A 602 LTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI 667 (684)
T ss_dssp HHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCCC--CcchHHHHHHHHHHHHHHh
Confidence 98888999999998 78888887766544434 899999999888764 3499999999998876654
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.82 E-value=9.3e-19 Score=207.99 Aligned_cols=352 Identities=16% Similarity=0.116 Sum_probs=226.2
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCCC-------cCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHH
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSS-------NVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a-------~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~ 232 (650)
..++++.+++..|+.+. +..++-+++|+...+-- .-..|.-+|+||+.+++.+++..|++++++.+|..++
T Consensus 281 ~~~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~ 358 (1020)
T 1ulv_A 281 ALRTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLF 358 (1020)
T ss_dssp HHHHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788999999998753 22224566666432110 0113888999999999999998999999999999999
Q ss_pred HhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccC--CCChHHHHHHHHHHHHHHhCCHhH
Q 006328 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVA--PVDSGLWWIILLRAYGKCSGDLLV 310 (650)
Q Consensus 233 ~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~yg--sVDAtLWfIial~~Y~~~TGD~~f 310 (650)
..|.. .+|.++..|.+. |+. +++ ..|.+.++|+++++|.+ + |.
T Consensus 359 ~~Q~~---------~~G~~~~~y~i~-------------------G~~---~w~~~Q~D~~g~~l~~~~~~~~-~-d~-- 403 (1020)
T 1ulv_A 359 TYQQQ---------PDGHFPQTSRVD-------------------GTI---GQNGIQLDETAFPILLANQIGR-T-DA-- 403 (1020)
T ss_dssp HHTCC---------TTSCCCSCBCTT-------------------SCB---CCCCCBTHHHHHHHHHHHHHTC-C-CH--
T ss_pred HHhcC---------CCCCeeeEEecC-------------------CCc---CCCCccCccchHHHHHHHHHHh-c-CH--
Confidence 88741 456666655211 111 122 78999999999999976 4 52
Q ss_pred HHhhhHHH-HHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHH
Q 006328 311 QERIDVQT-GIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALN 389 (650)
Q Consensus 311 ~e~~e~~~-~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~ 389 (650)
++.+ .|+.+++|+...+ ..++-..|-|+ .|+-....++.|.||+++++|++. .++.+.+++++
T Consensus 404 ----~~w~~~v~~al~~i~~~g-------~~~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~-~G~~~~a~~w~ 467 (1020)
T 1ulv_A 404 ----GFYRNELKPAADYLVAAG-------PKTPQERWEET----GGYSTSTLASQIAALAAAADIAGK-NGDAGSAAVYR 467 (1020)
T ss_dssp ----HHHHHTHHHHHHHHHHHC-------SCBSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHhC-------CCCChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHH
Confidence 2566 8999999988742 23444468775 467788999999999999999986 56778899999
Q ss_pred HHHHHHHHHHHHHhhhhh-----hhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCcccccc
Q 006328 390 NRLVALSFHIREYYWIDL-----RKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRF 464 (650)
Q Consensus 390 ~ra~~L~~~~~~~FW~d~-----~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~ 464 (650)
+.+++|++.|+++||+++ ++.+... ..+. ++ + . -..-|+.+.+..+ .+ +...
T Consensus 468 ~~Ad~i~~~i~~~~w~~~g~~~~~g~f~r~--~~dg------~~-~--~-----~~~~~~~n~~~~~----~~---~~~l 524 (1020)
T 1ulv_A 468 ATADEWQRSTEKWMFTTNGPVGDGKYYLRI--SATG------NP-N--D-----GATRDWGNGAGVH----PE---NAVL 524 (1020)
T ss_dssp HHHHHHHHTHHHHHEESSCSSTTSCEECSE--ESSS------CT-T--S-----CCEEECSTTCCEE----EG---GGCC
T ss_pred HHHHHHHHHHHHhCCCCcccccccCeeEEE--ecCC------Cc-c--c-----ccccccccccccC----CC---CCee
Confidence 999999999999999875 2222210 0000 00 0 0 0000111111100 01 1111
Q ss_pred ccccchh-hhhcCCCCHH--HHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccc---c------
Q 006328 465 FSLGNIW-SIVNGLATRD--QSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYH---N------ 532 (650)
Q Consensus 465 ~slGN~L-AI~~gLl~~e--qa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYH---N------ 532 (650)
+ .+++ .+.+|+++++ +...-++.|++ .|...+ | .+| +-.+|++.+|| |
T Consensus 525 D--as~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~------~----~G~-----~~~RY~~D~Y~~~~dG~~~~~ 584 (1020)
T 1ulv_A 525 D--GGFLEFVRLGVKAPADPYVADSLAETDA---SISQET------P----GGR-----MWHRYTYDGYGEKADGSPWDG 584 (1020)
T ss_dssp B--GGGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEE------T----TEE-----EECSBTTCCCSCCTTSCCCSS
T ss_pred e--HHHHHHHHhCCCCCCcHHHHHHHHHHHH---HhcccC------C----CCc-----eeecCCccccccccCCCcccC
Confidence 1 2333 3358886655 55666777776 453211 1 011 11234444555 3
Q ss_pred ---CCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC-CCCccccC-CC----CCccCCC--CchhhHHhHHHHHH
Q 006328 533 ---AGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRD-KWPEYYDT-KR----ARFIGKQ--AQLFQTWSIAGYLV 601 (650)
Q Consensus 533 ---GgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~-~~pElFDG-~~----g~p~G~~--ac~~QAWSaA~~L~ 601 (650)
|++||..-.-++.++++.|+ +|.++++.+..+-... .+||.||. .+ +-+.|.+ +|.+||||.+++|.
T Consensus 585 ~g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~~~~~~tG~p~~g~~PqaWSha~~I~ 662 (1020)
T 1ulv_A 585 TGIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVR 662 (1020)
T ss_dssp CCCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeecccccccccCCcCCccccCCcHHHHHHHHHHH
Confidence 77999886777888888887 6888887776654443 48999994 21 1123443 67799999999988
Q ss_pred HHHhhcCC
Q 006328 602 SKILLADP 609 (650)
Q Consensus 602 a~~lL~~p 609 (650)
+.+.+.+.
T Consensus 663 ~~~~l~~~ 670 (1020)
T 1ulv_A 663 LAAGVKAG 670 (1020)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhCC
Confidence 88776543
No 11
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.37 E-value=2e-10 Score=126.67 Aligned_cols=324 Identities=13% Similarity=0.066 Sum_probs=188.5
Q ss_pred cceeeeccCCCCCcCCCCCcccchhhHHHHHHHh---hcCCHHHHHHHHHHHHH---hhhhhhccCCCCCCCCCCC----
Q 006328 183 PIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL---LKGEYDIVRNFILHTLQ---LQSWEKTMDCHSPGQGLMP---- 252 (650)
Q Consensus 183 p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL---~~G~peiar~~L~~l~~---LQ~~~~~~d~~~~~~GliP---- 252 (650)
|.|.+.|+.+. ..+.|.-+|.||+.+++.+++ ..|..++++.++..+.. +|.... ..|-++
T Consensus 33 ~tGaiIASptt--snpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~~gl 103 (472)
T 1gai_A 33 DSGIVVASPST--DNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSSGGL 103 (472)
T ss_dssp CTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTTTGG
T ss_pred CCceEEeeCCC--CCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCccccCCC
Confidence 44555443322 247899999999999999998 78888887777777665 553211 334344
Q ss_pred --CcceeecccCCCCCCCcccccCCCCCCCccCccCCCCh-----HHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHH
Q 006328 253 --ASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDS-----GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILK 325 (650)
Q Consensus 253 --~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDA-----tLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~ 325 (650)
-+|.| + |+ ...++.| --..|. +-..+.+++ +..+|+..+++. .+.+.|+.+++
T Consensus 104 gE~~y~v-----d-----G~-~~~~~w~------~~Q~D~~g~ra~~~~~~~~~--l~~~g~~~~~~~-~~w~~i~~~l~ 163 (472)
T 1gai_A 104 GEPKFNV-----D-----ET-AYTGSWG------RPQRDGPALRATAMIGFGQW--LLDNGYTSAATE-IVWPLVRNDLS 163 (472)
T ss_dssp GCCEECT-----T-----SC-BCCSCCS------CCCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-THHHHHHHHHH
T ss_pred CCceEcc-----C-----CC-ccCCcCC------CccccccchhHHHHHHHHHH--HHHcCCccccch-hHHHHHHHHHH
Confidence 33321 1 11 1111221 123455 334466665 556788876643 47889999999
Q ss_pred HHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 006328 326 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWI 405 (650)
Q Consensus 326 ~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~ 405 (650)
++....- .++-.-|=.+ .|+-....++-+.||..+++|++..+.. ++++.+.+..++..| ++||.
T Consensus 164 ~v~~~w~-------~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~~i-~~~w~ 228 (472)
T 1gai_A 164 YVAQYWN-------QTGYDLWEEV----NGSSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILCYL-QSFWT 228 (472)
T ss_dssp HHHHHTT-------SCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHH-GGGBC
T ss_pred HHHHhcC-------CCCCCCCccc----CCCCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHHHH-HhhcC
Confidence 9875210 1232345444 3566778899999999999999864333 567788888999988 88985
Q ss_pred hhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhhcCC--------
Q 006328 406 DLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGL-------- 477 (650)
Q Consensus 406 d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~~gL-------- 477 (650)
+-+... |. +. +....|.+ -+|+...+.
T Consensus 229 ---g~f~~~-----------------------------------~~-~~-~~~~lDas-----~LL~~~~~f~p~~~~~~ 263 (472)
T 1gai_A 229 ---GSYILA-----------------------------------NF-DS-SRSGKDTN-----TLLGSIHTFDPEAGCDD 263 (472)
T ss_dssp ---SSSBCS-----------------------------------EE-SC-CSCCCCTH-----HHHHHHTTCCTTCCSCT
T ss_pred ---CceEEe-----------------------------------ec-CC-CCCCcCHH-----HHHhhhccCCccccccc
Confidence 100000 00 00 01113321 112222222
Q ss_pred ----CCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHH----
Q 006328 478 ----ATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIK---- 549 (650)
Q Consensus 478 ----l~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK---- 549 (650)
.+.++...-++.|++ +|..-||+..=-| .+-.+ +=-+|..-.|..|+.|.---.-++.++.+
T Consensus 264 ~~~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~----~g~g~---~v~RY~~D~y~gg~pw~lcT~wlae~l~~a~~~ 333 (472)
T 1gai_A 264 STFQPCSPRALANHKEVVD---SFRSIYTLNDGLS----DSEAV---AVGRYPEDSYYNGNPWFLCTLAAAEQLYDALYQ 333 (472)
T ss_dssp TTTCTTSHHHHHHHHHHHH---TTTTTCGGGTTCC----TTSCC---CCCSCTTCCGGGSCCBHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH---HHHHhcCcCCCCc----Ccccc---eEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 144566666667766 4543333321000 01000 11123333567799887653334444332
Q ss_pred -------------------------cC----------CHHH-----HHHHHHHHHHHhccCC-CCccccCCCCCccCCCC
Q 006328 550 -------------------------MN----------RPEI-----AARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQA 588 (650)
Q Consensus 550 -------------------------~G----------~~~~-----A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~a 588 (650)
.| +.++ |.++++.+..+-...+ +||=||-.+|+|.|-.
T Consensus 334 ~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~gn~- 412 (472)
T 1gai_A 334 WDKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSAR- 412 (472)
T ss_dssp HHHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEESSS-
T ss_pred hhccCceeecchhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCCcc-
Confidence 34 4445 7777777766555555 8999998899888555
Q ss_pred chhhHHhHHHHHHHHHhhcC
Q 006328 589 QLFQTWSIAGYLVSKILLAD 608 (650)
Q Consensus 589 c~~QAWSaA~~L~a~~lL~~ 608 (650)
+||||-+++|.+...+..
T Consensus 413 --PlawSha~lI~aa~~l~~ 430 (472)
T 1gai_A 413 --DLTWSYAALLTANNRRNS 430 (472)
T ss_dssp --SCHHHHHHHHHHHHHHTT
T ss_pred --chHHHHHHHHHHHHHHhc
Confidence 999999999999988863
No 12
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.37 E-value=1.1e-10 Score=129.33 Aligned_cols=333 Identities=16% Similarity=0.078 Sum_probs=198.3
Q ss_pred CcceeeeccCCCCCcCCCCCcccchhhHHHHHHHhhcCC--------HHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCC
Q 006328 182 SPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGE--------YDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPA 253 (650)
Q Consensus 182 ~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL~~G~--------peiar~~L~~l~~LQ~~~~~~d~~~~~~GliP~ 253 (650)
.|.|.+.|+.+. ..+.|.-+|.||+.+++.+++..|. .++++.++.....+|.... ..|-++.
T Consensus 47 ~~~GaiIASptt--snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~~~ 117 (492)
T 2fba_A 47 GVPGTVIASPST--SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSFDD 117 (492)
T ss_dssp SCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCTTS
T ss_pred CCCCeEEEeCCC--CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCcCc
Confidence 346766664332 2478999999999999999876665 8888888886555664211 3344442
Q ss_pred -cceeeccc---CCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHH-------------HhhhH
Q 006328 254 -SFKVRTVP---LDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQ-------------ERIDV 316 (650)
Q Consensus 254 -~fki~h~~---~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~-------------e~~e~ 316 (650)
...++-|| ++ |+ ...+.. .--..|.+-+.++++..|.++..+.... ...++
T Consensus 118 ~~~~glgep~y~vd-----G~-~~~~~w------~~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (492)
T 2fba_A 118 ENHKGLGEPKFNTD-----GS-AYTGAW------GRPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDI 185 (492)
T ss_dssp GGGGGGGCCEECTT-----SC-BCCSCC------SCCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHH
T ss_pred ccccccCceeeccC-----CC-cCCccc------CCccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHH
Confidence 11111111 01 00 001111 1245788999999999987765433321 00124
Q ss_pred H-HHHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 006328 317 Q-TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVAL 395 (650)
Q Consensus 317 ~-~~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L 395 (650)
. +.|+.+++++.... -.|+-.-|=.+ .|+-....+.-+.||.++++|++. .++.+.++++.+.++.+
T Consensus 186 ~~~~i~~~l~~v~~~w-------~~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~-~g~~~~a~~w~~~ad~i 253 (492)
T 2fba_A 186 YKNIIKPDLEYVIGYW-------DSTGFDLWEEN----QGRHFFTSLVQQKALAYAVDIAKS-FDDGDFANTLSSTASTL 253 (492)
T ss_dssp HHHTHHHHHHHHHHHT-------TSCEECTTSCC----EECCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-------CCCCCCCcCcc----CCCChHHHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHH
Confidence 3 78999999987621 01333345444 356677999999999999999986 56778888999999999
Q ss_pred HHHHHHH---hhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccc------cCCcccccccc
Q 006328 396 SFHIREY---YWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNL------QPAHMDFRFFS 466 (650)
Q Consensus 396 ~~~~~~~---FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v------~P~~~d~r~~s 466 (650)
+..|.++ ||.+.++. ++... ....+|.+
T Consensus 254 ~~~I~~~~~~~w~~~~~~----------------------------------------f~~~~~~~~~~~~~~lDas--- 290 (492)
T 2fba_A 254 ESYLSGSDGGFVNTDVNH----------------------------------------IVENPDLLQQNSRQGLDSA--- 290 (492)
T ss_dssp HHHHHSTTTCCEETTTTE----------------------------------------ECSSHHHHHTTSCCSCCTH---
T ss_pred HHHHHHhhhcCCCCCCCE----------------------------------------EEEeccccccCCCCcccHH---
Confidence 9999888 88754332 11111 11123322
Q ss_pred ccchhhh--hcC-------CC--CHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCccccc---
Q 006328 467 LGNIWSI--VNG-------LA--TRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHN--- 532 (650)
Q Consensus 467 lGN~LAI--~~g-------Ll--~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHN--- 532 (650)
-+++. -++ ++ +.++...-++.|++ +|...+|+..=-+ ....+ .||..| .|..
T Consensus 291 --~Ll~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~~pin~~~~--~g~~v-~RY~~D------~y~g~~~ 356 (492)
T 2fba_A 291 --TYIGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE---DNKDRYSVNSAYS--AGAAI-GRYPED------VYNGDGS 356 (492)
T ss_dssp --HHHHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---HHHHHCGGGTTCS--SCCCC-CSCTTC------CBCSSSB
T ss_pred --HHHHHHhccccccccCCccCCCCHHHHHHHHHHHH---HHhcccCccccCc--ceeEE-EeCCCC------CCCCCCc
Confidence 01111 122 22 33456666667776 6665554421000 01111 122222 2333
Q ss_pred --CCCchhhHHHHHH----HH----HHcC-------------------------C----------------------HHH
Q 006328 533 --AGSWPTLLWQFTV----AC----IKMN-------------------------R----------------------PEI 555 (650)
Q Consensus 533 --GgvWP~llg~~~~----Al----lK~G-------------------------~----------------------~~~ 555 (650)
|+.|+-.-..++. |+ .+.| + .++
T Consensus 357 ~~g~pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~ 436 (492)
T 2fba_A 357 SEGNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTF 436 (492)
T ss_dssp SSCCCBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHH
Confidence 7888855222333 32 2444 3 568
Q ss_pred HHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHHHHhhc
Q 006328 556 AARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA 607 (650)
Q Consensus 556 A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~ 607 (650)
|..+++.+..+-...| +||=||..+|+|.|-. +||||-+++|.+...+.
T Consensus 437 A~~~l~~~~~~~~~~GllsEq~d~~tG~~~ga~---PltwSha~li~aa~~~~ 486 (492)
T 2fba_A 437 GDSFLQVILDHINDDGSLNEQLNRYTGYSTGAY---SLTWSSGALLEAIRLRN 486 (492)
T ss_dssp HHHHHHHHHHHSCTTSCCCSEECTTTCCEESST---TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCccccCCCCCCCCCcc---chHHHHHHHHHHHHHHh
Confidence 8888887777655555 8999998899888555 99999999999877664
No 13
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.32 E-value=7.2e-11 Score=129.72 Aligned_cols=362 Identities=14% Similarity=0.115 Sum_probs=224.1
Q ss_pred chHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHHh--hcCCHHHHHHHHHHHHHhhhhh
Q 006328 161 VDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL--LKGEYDIVRNFILHTLQLQSWE 238 (650)
Q Consensus 161 ~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL--~~G~peiar~~L~~l~~LQ~~~ 238 (650)
+..+++.++--=-...|.+.+.|.-||..-| | ..-|-||+.-.+.-.+ +..+|++ ++.++.....|..-
T Consensus 72 l~~lF~n~fpnTldTtv~~~~~~~tfViTGD-----I---~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~ 142 (489)
T 2p0v_A 72 LAWMFENCFPNTLDTTVHFDGKEDTFVYTGD-----I---HAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKC 142 (489)
T ss_dssp HHHHHHHHTTHHHHHTEEECSSSCEEECCBS-----S---SSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhheeeCCCCCEEEEeCC-----c---cchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHH
Confidence 3445555544222345666777777776632 2 3689999988777653 5667877 77888888888877
Q ss_pred hccCCCCCCCCCCCC-cceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhHH
Q 006328 239 KTMDCHSPGQGLMPA-SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ 317 (650)
Q Consensus 239 ~~~d~~~~~~GliP~-~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~~ 317 (650)
-.+|+|. +.+-|. +-. .|.. ..+.+.|-. +.+=-.+|+.-.+|.+++.|++.|||.+|+.. .+.
T Consensus 143 i~~dPYa--NAF~~~~~~~-~~~~-------d~t~~~P~v----~E~KyElDSla~~L~la~~Yy~~TgD~~~f~~-~w~ 207 (489)
T 2p0v_A 143 INIDPYA--NAFNMNSEGG-EWMS-------DLTDMKPEL----HERKWEIDSLCYPIRLAYHYWKTTGDASVFSD-EWL 207 (489)
T ss_dssp HHHCTTC--SEECSSSCCC-GGGG-------SSSCCCTTE----EECCCCHHHHHHHHHHHHHHHHHHCCCTTSSH-HHH
T ss_pred hccCccc--cccCCCCCCC-CCCC-------CCCCCCccc----ccccchhhhhHHHHHHHHHHHHHhCCchhhHH-HHH
Confidence 7778884 222221 100 1110 011222321 11222899999999999999999999999864 467
Q ss_pred HHHHHHHHHHHhC-CCCC------C--------Cccc-------cc-CCCccccccc----CCCCCchhHHHHHHHHHHH
Q 006328 318 TGIKMILKLCLAD-GFDM------F--------PTLL-------VT-DGSCMIDRRM----GIHGHPLEIQALFYSALLC 370 (650)
Q Consensus 318 ~~i~~IL~~~l~~-~f~~------~--------~~lL-------v~-dG~~w~D~r~----gr~G~pVEIQALwY~ALr~ 370 (650)
.+|+.|++++..+ +... | +++- +. -|..|---|- -+.|+-+..|++.|-+|+.
T Consensus 208 ~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~ 287 (489)
T 2p0v_A 208 QAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRK 287 (489)
T ss_dssp HHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHH
Confidence 8999999999762 2110 0 0000 00 1223332211 4688999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcc
Q 006328 371 AREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGY 450 (650)
Q Consensus 371 aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggY 450 (650)
+++|++...++.+.++++++.++.|++.|.++.|++..+.-.+|+|..+.|+. +
T Consensus 288 aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G~--------------------------~ 341 (489)
T 2p0v_A 288 AAEILNTVNRKPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGN--------------------------Q 341 (489)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC--------------------------E
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCCC--------------------------c
Confidence 99999875667888999999999999999999998764443466665554432 1
Q ss_pred eeccccCCccccccc-cccchhhh-hcCCCCH--HHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCC
Q 006328 451 LIGNLQPAHMDFRFF-SLGNIWSI-VNGLATR--DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNT 526 (650)
Q Consensus 451 L~g~v~P~~~d~r~~-slGN~LAI-~~gLl~~--eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nr 526 (650)
+ .|| + +.+.+|++ .+|.++. +.-+.-++.|++ ++ .|+-.+ +....+. |.|
T Consensus 342 ~-------~mD---DanvpSLLslPylG~~~~dDpiy~nTr~~IlS---~~-NPyy~~-------G~~~~GI--Gsp--- 395 (489)
T 2p0v_A 342 L-------LMD---DANVPSLIALPYLGDVKVTDPIYQNTRKFVWS---ED-NPYFFK-------GSAGEGI--GGP--- 395 (489)
T ss_dssp E-------CCC---CSSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-STTEEE-------CSSCEEE--CCT---
T ss_pred c-------cCC---CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHh---hc-CCcccc-------cccccCC--CCC---
Confidence 1 022 1 23455665 5666543 355556666665 33 122221 1111111 211
Q ss_pred CcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHHHHh
Q 006328 527 PWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKIL 605 (650)
Q Consensus 527 P~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~l 605 (650)
|-|--.||.+..+..| +..++.+++++.|..+.+.-..-+ ++|=||-+++.+. .+.+.|||-+.|..+..-
T Consensus 396 ----H~~~~~~Wpmsll~~a-lts~d~~E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~~---TR~wFaWanslF~e~il~ 467 (489)
T 2p0v_A 396 ----HIGYDMIWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNF---TRAWFAWQNTLFGELILK 467 (489)
T ss_dssp ----TTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSCSCCSEEETTEEEEE---ECSCBHHHHHHHHHHHHH
T ss_pred ----CCCCCchHHHHHHHHH-HhcCCHHHHHHHHHHHHhhCCCCCeeeeeECCCCCCcC---CCcccHHHHHHHHHHHHH
Confidence 5544334444555555 457889999999987766433344 7999998886655 445999999997655544
Q ss_pred h
Q 006328 606 L 606 (650)
Q Consensus 606 L 606 (650)
+
T Consensus 468 l 468 (489)
T 2p0v_A 468 L 468 (489)
T ss_dssp H
T ss_pred H
Confidence 3
No 14
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.32 E-value=5.1e-10 Score=126.71 Aligned_cols=185 Identities=12% Similarity=-0.010 Sum_probs=117.5
Q ss_pred cceeeeccCCCCCcCCCCCcccchhhHHHHHHHh----hcCCHHHHHHHHHHHH---HhhhhhhccCCCCCCCCCCCCcc
Q 006328 183 PIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL----LKGEYDIVRNFILHTL---QLQSWEKTMDCHSPGQGLMPASF 255 (650)
Q Consensus 183 p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL----~~G~peiar~~L~~l~---~LQ~~~~~~d~~~~~~GliP~~f 255 (650)
|.|.+.|+.+. ..+.|.-+|.||+.+++.+++ ..|..++++.++..+. .+|.+-. ..|-.|..
T Consensus 32 ~tGaiIAsptt--s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-------~~G~~~~~- 101 (599)
T 2vn4_A 32 SAGAVIASPST--IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-------PSGSLADG- 101 (599)
T ss_dssp CTTCBCSCSCC--SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-------TTBCSTTS-
T ss_pred CCceEEEECCC--CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-------CCCCcccc-
Confidence 45555553332 357999999999999999998 8899999999998886 4675321 34444321
Q ss_pred eeecccCCCCCCCcccccCCCCCCC---ccCccCCCCh-----HHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHH
Q 006328 256 KVRTVPLDGDDSATEEVLDPDFGEA---AIGRVAPVDS-----GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLC 327 (650)
Q Consensus 256 ki~h~~~r~~~~~~~~~l~pd~Ge~---~~~~ygsVDA-----tLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~ 327 (650)
+.+.|| ....| |.. +.+ --.-|. +-..+.+++ +..+|+.++++. .+.+.|+.+++++
T Consensus 102 ~~l~E~----------~~~ld-G~~~~~~w~-~~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~~~-~~w~~v~~~l~~v 166 (599)
T 2vn4_A 102 SGLGEP----------KFELT-LKPFTGNWG-RPQRDGPALRAIALIGYSKW--LINNNYQSTVSN-VIWPIVRNDLNYV 166 (599)
T ss_dssp GGGGCC----------EECTT-SCBCCSCCS-CCCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-HTHHHHHHHHHHH
T ss_pred cCcCce----------EEecC-CccccCcCC-CeeccccchhHHHHHHHHHH--HHHhCCcccccH-HHHHHHHHHHHHH
Confidence 011111 00001 111 111 123344 444555555 456899887653 4788999999998
Q ss_pred HhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 006328 328 LADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDL 407 (650)
Q Consensus 328 l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~ 407 (650)
....- .++-.-|=.+ .|+-....+.-+.||.++++|++..+.. ++++.+.+..|+..| ++||.+.
T Consensus 167 ~~~w~-------~~d~dlWEer----~g~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w~~~ad~i~~~i-~~~w~~~ 231 (599)
T 2vn4_A 167 AQYWN-------QTGFDLWEEV----NGSSFFTVANQHRALVEGATLAATLGQS---GSAYSSVAPQVLCFL-QRFWVSS 231 (599)
T ss_dssp HHHTT-------SCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHH-GGGEETT
T ss_pred HHhCC-------CCCCCeeeec----CCcchHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHH-HhhcCCC
Confidence 76210 1232345444 3556678899999999999999864333 566778888899888 8899754
No 15
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=99.09 E-value=3.7e-09 Score=115.48 Aligned_cols=363 Identities=12% Similarity=0.079 Sum_probs=223.9
Q ss_pred chHHHHHHHHHHHHhhccccC----CcceeeeccCCCCCcCCCCCcccchhhHHHHHHHh--hcCCHHHHHHHHHHHHHh
Q 006328 161 VDCLEDEAWNLLRDSMVYYCG----SPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL--LKGEYDIVRNFILHTLQL 234 (650)
Q Consensus 161 ~~~~~~~A~~lLr~~~v~~~~----~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL--~~G~peiar~~L~~l~~L 234 (650)
+..+++.++--=-...|.+.. .|.-||..-| =..-|-||+.-.+.-.+ +..++++ ++.++.....
T Consensus 50 l~~lF~n~~pnTldTTv~~~~~~~~~~~tFviTGD--------I~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~r 120 (463)
T 3p2c_A 50 LAWMFTNCFPNTLDTTVHFRKGSDGKPDTFVYTGD--------IHAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILR 120 (463)
T ss_dssp HHHHHHHHTTHHHHHTEEEEECTTSCEEEEECCBS--------SCSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHH
T ss_pred HHHHHHHhccccHhhheeeeccCCCCCCEEEEeCC--------CcchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHH
Confidence 344555554322233455533 3555555522 23689999988777653 6678877 7788888888
Q ss_pred hhhhhccCCCCCCCCCCCC--cceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHH
Q 006328 235 QSWEKTMDCHSPGQGLMPA--SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (650)
Q Consensus 235 Q~~~~~~d~~~~~~GliP~--~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e 312 (650)
|..--.+|+|. +.+-|. +- -.|. ...+.+.| .-+.+=-.+||--.+|.+.+.|++.|||.+|+.
T Consensus 121 Q~~~i~~dPYa--NAF~~~~~sg-~~~~-------~d~t~~~p----~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~ 186 (463)
T 3p2c_A 121 QFKCINIDPYA--NAFNDGAIPD-GHWM-------SDLTDMKP----ELHERKWEIDSLCYPLRLAYHYWKTTGDASIFN 186 (463)
T ss_dssp HHHHHHHCTTC--SEECSSCCTT-CTTT-------TSBSCCCT----TEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCS
T ss_pred HHHHhccCccc--cccCCCCCCC-Cccc-------CCCCCCCC----cEEEEecHhhhhhHHHHHHHHHHHhhCChhhhc
Confidence 88766667773 221121 10 0000 00001111 112234579999999999999999999999876
Q ss_pred hhhHHHHHHHHHHHHHhC-CCC-CC------------Cccc-------cc-CCCcccccc----cCCCCCchhHHHHHHH
Q 006328 313 RIDVQTGIKMILKLCLAD-GFD-MF------------PTLL-------VT-DGSCMIDRR----MGIHGHPLEIQALFYS 366 (650)
Q Consensus 313 ~~e~~~~i~~IL~~~l~~-~f~-~~------------~~lL-------v~-dG~~w~D~r----~gr~G~pVEIQALwY~ 366 (650)
. +...+++.||+-+..+ +.. .. +++- ++ -|..|-.=| --.+|+.|--|++..-
T Consensus 187 ~-~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v 265 (463)
T 3p2c_A 187 E-EWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVS 265 (463)
T ss_dssp H-HHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHH
Confidence 4 6788999999988742 221 00 0110 01 122333111 1468888999999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCC
Q 006328 367 ALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPN 446 (650)
Q Consensus 367 ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~ 446 (650)
+|+.+++|+....++.+.++++++.+..|++.|.++.+++....-.+|+|+.+.|+.
T Consensus 266 ~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs----------------------- 322 (463)
T 3p2c_A 266 SLRKAAEILEKVNKKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGN----------------------- 322 (463)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC-----------------------
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCCC-----------------------
Confidence 999999999865678889999999999999999999998765555677776665552
Q ss_pred CCcceeccccCCccccccccccchhhh-hcCCCCH--HHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCC
Q 006328 447 KGGYLIGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDP 523 (650)
Q Consensus 447 ~ggYL~g~v~P~~~d~r~~slGN~LAI-~~gLl~~--eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~ 523 (650)
+++ ||- -+.+.+|++ .+|.++. +.-+.-.+.|++ +. ++-| +.|..
T Consensus 323 ---~~l-------mDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~--------------NPyY---~~G~~ 370 (463)
T 3p2c_A 323 ---HHL-------MDD--ANVPSLLAMPYLGDVNVNDPIYQNTRRFVWS---ED--------------NPYF---FKGKA 370 (463)
T ss_dssp ---EEC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT--------------STTE---EECSS
T ss_pred ---ccC-------CCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHHh---cc--------------CCce---eccCc
Confidence 111 220 123556666 5666443 333444444544 11 1111 11111
Q ss_pred CCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHH
Q 006328 524 KNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVS 602 (650)
Q Consensus 524 ~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a 602 (650)
..--.+-|.|.-.||.+..++.+ +..+..+++++.|..+.+.-..-+ +.|=||-+++.+. .+...|||=+.|..+
T Consensus 371 ~~GiG~PH~~~~~~Wpmsll~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaNs~F~el 446 (463)
T 3p2c_A 371 GEGIGGPHIGYDMVWPMSIMMKA-FTSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKF---TRAWFAWQNTLFGEL 446 (463)
T ss_dssp CEEECCTTTCTTEECHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCBHHHHHHHHHH
T ss_pred cccCCCCCCCCCCchHHHHHHHH-hccCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcC---CCCchhhhhHHHHHH
Confidence 11112448877667776666554 445788999999988777544445 6999998886544 445999999997555
Q ss_pred HHhh
Q 006328 603 KILL 606 (650)
Q Consensus 603 ~~lL 606 (650)
..-+
T Consensus 447 il~l 450 (463)
T 3p2c_A 447 ILKL 450 (463)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 16
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=99.02 E-value=4.1e-08 Score=106.35 Aligned_cols=361 Identities=13% Similarity=0.041 Sum_probs=225.1
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHH--HhhcCCHHHHHHHHHHHHHhhhh
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIA--FLLKGEYDIVRNFILHTLQLQSW 237 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lg--lL~~G~peiar~~L~~l~~LQ~~ 237 (650)
+...+++.++--=-...|.+.+.+.-|+..-| =..-|-||+.-.+.- .|+..++++ ++.++.....|..
T Consensus 24 ~l~~lF~n~~pnTldTtv~~~~~~~tFviTGD--------I~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~ 94 (426)
T 3qry_B 24 EWVDVFERCYTDTLDNTVEILEDGSTFVLTGD--------IPAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMT 94 (426)
T ss_dssp HHHHHHHHHHHHHHHHSEEECTTSCEEECSSS--------SSEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhccchhhheeEecCCCCEEEEeCC--------CcchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHH
Confidence 45567777775444557788777777777632 237899999955544 356778887 7788888888887
Q ss_pred hhccCCCCCCCCCCCC-cceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhH
Q 006328 238 EKTMDCHSPGQGLMPA-SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDV 316 (650)
Q Consensus 238 ~~~~d~~~~~~GliP~-~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~ 316 (650)
--..|+|. +.+-|. +-. .|. ... .++....-+.+=-.+||--.+|.+.+.|++.|||.+|+.. +.
T Consensus 95 ~i~~dPYa--NAF~~~~~~~-~~~-------~~d---~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w 160 (426)
T 3qry_B 95 LVLKDPYA--NSFNIEENWK-GHH-------ETD---HTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IF 160 (426)
T ss_dssp HHHHCTTC--SEEESSSCCC-SST-------TTE---ESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HH
T ss_pred HhccCccc--ccCCCCCCCC-Ccc-------CCC---CCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HH
Confidence 66667773 221111 000 000 000 0111112223455799999999999999999999998765 57
Q ss_pred HHHHHHHHHHHHhC-CCCCC------------Cccc-------cc-CCCcccccc----cCCCCCchhHHHHHHHHHHHH
Q 006328 317 QTGIKMILKLCLAD-GFDMF------------PTLL-------VT-DGSCMIDRR----MGIHGHPLEIQALFYSALLCA 371 (650)
Q Consensus 317 ~~~i~~IL~~~l~~-~f~~~------------~~lL-------v~-dG~~w~D~r----~gr~G~pVEIQALwY~ALr~a 371 (650)
..+++.||+-+..+ +.... +++- ++ -|..|-.=| --.+|+.|--|++..-+|+.+
T Consensus 161 ~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~ 240 (426)
T 3qry_B 161 VAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYV 240 (426)
T ss_dssp HHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHH
Confidence 88999999888753 22111 0110 00 122333211 146888899999999999999
Q ss_pred HHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCc
Q 006328 372 REMLA--PEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGG 449 (650)
Q Consensus 372 aeL~~--~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~gg 449 (650)
++|+. ...++.+.++++++.+..|++.|.++..++....-.+|+|+.+.|+..
T Consensus 241 aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs~------------------------- 295 (426)
T 3qry_B 241 QEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGNA------------------------- 295 (426)
T ss_dssp HHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSCB-------------------------
T ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCCc-------------------------
Confidence 99997 234677889999999999999999999988766667777776665531
Q ss_pred ceeccccCCccccccccccchhhh-hcCCCC--HHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCC
Q 006328 450 YLIGNLQPAHMDFRFFSLGNIWSI-VNGLAT--RDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNT 526 (650)
Q Consensus 450 YL~g~v~P~~~d~r~~slGN~LAI-~~gLl~--~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nr 526 (650)
.+ ||- -+.+.+|++ ..|.++ .+.-+.-.+.|++ ++ . +-| +.|....-
T Consensus 296 ~l--------mDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-N-------------Pyy---~~G~~~~G 345 (426)
T 3qry_B 296 SI--------MDD--PNVPSLLAAPYLGYCSVDDEVYQATRRTILS---SE-N-------------PYF---YQGEYASG 345 (426)
T ss_dssp CC--------CCC--SSSSCSTTTTTTTSSCTTCHHHHHHHHHHTS---TT-S-------------TTE---EECSSCEE
T ss_pred cc--------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-C-------------Cce---eccCccCc
Confidence 11 220 123556666 556543 3333444455554 22 1 111 11111111
Q ss_pred CcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHH
Q 006328 527 PWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVS 602 (650)
Q Consensus 527 P~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a 602 (650)
-.+-|.|.-.||.+..+..+ +..+..+++++.|..+.+.-..-+ +.|=||-+++... .+...||+=+.|--+
T Consensus 346 iG~PH~~~~~~Wpmsl~~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~el 418 (426)
T 3qry_B 346 LGSSHTFYRYIWPIALSIQG-LTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLY---SREWFSWANMMFCEL 418 (426)
T ss_dssp ECCTTSCTTEECHHHHHHHH-HTCSCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHH-HhCCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCchhhhhHHHHHH
Confidence 12448877666666666554 234678889999987766544444 6999998774333 345899998876443
No 17
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.98 E-value=4.6e-08 Score=106.05 Aligned_cols=360 Identities=14% Similarity=0.089 Sum_probs=225.7
Q ss_pred cchHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHH--hhcCCHHHHHHHHHHHHHhhhh
Q 006328 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAF--LLKGEYDIVRNFILHTLQLQSW 237 (650)
Q Consensus 160 ~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lgl--L~~G~peiar~~L~~l~~LQ~~ 237 (650)
+...+++.++--=-...|.+ +.|.-|+..-| | ..-|-||+.-.+.-. |+..+++++ +.++.....|..
T Consensus 27 ~l~~lF~n~~pnTldTtv~~-~~~~tFviTGD-----I---~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~ 96 (427)
T 3qt9_A 27 KLQELFYNCFINTMDTTVEV-SEGDAFVITGD-----I---PAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVK 96 (427)
T ss_dssp HHHHHHHHHHHHHHHHTEEE-ETTEEEECCBS-----S---CSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHH
T ss_pred HHHHHHHHhcccchhheeEe-CCCCEEEEeCC-----C---cchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHH
Confidence 45567777775333456677 66666777632 2 368999999555543 566788766 677777788877
Q ss_pred hhccCCCCCCCCCCCC-cceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhH
Q 006328 238 EKTMDCHSPGQGLMPA-SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDV 316 (650)
Q Consensus 238 ~~~~d~~~~~~GliP~-~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~ 316 (650)
--.+|+|. +.+-|. +-. .|. .+ .++....-+.+=-.+||--.+|.+.+.|++.|||.+|+.. +.
T Consensus 97 ~i~~dPYa--NAF~~~~~~~-~~~---------~d--~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w 161 (427)
T 3qt9_A 97 CIFIDPYA--NAFNKEPNGQ-KWD---------ND--ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DI 161 (427)
T ss_dssp HHHHCTTC--SEECSSSCCC-CSS---------CC--BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HH
T ss_pred HhccCccc--ccCCCCCCCc-CcC---------CC--CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HH
Confidence 66667773 222221 000 000 00 1111112223455799999999999999999999998764 57
Q ss_pred HHHHHHHHHHHHhC---------CCCCC-----Cccc-------cc-CCCcccccc----cCCCCCchhHHHHHHHHHHH
Q 006328 317 QTGIKMILKLCLAD---------GFDMF-----PTLL-------VT-DGSCMIDRR----MGIHGHPLEIQALFYSALLC 370 (650)
Q Consensus 317 ~~~i~~IL~~~l~~---------~f~~~-----~~lL-------v~-dG~~w~D~r----~gr~G~pVEIQALwY~ALr~ 370 (650)
..+++.||+-+..+ .|... +++- +. -|..|-.=| --.+|+.|--|++..-||+.
T Consensus 162 ~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~ 241 (427)
T 3qt9_A 162 KKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRY 241 (427)
T ss_dssp HHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHH
Confidence 88999999887642 12211 1111 11 133333211 14688999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcc
Q 006328 371 AREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGY 450 (650)
Q Consensus 371 aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggY 450 (650)
+++|+....++.+.++++++.+..|++.|.++..++....-.+|+|+.+.|+. +
T Consensus 242 ~aei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs--------------------------~ 295 (427)
T 3qt9_A 242 ISEIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGN--------------------------Y 295 (427)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC--------------------------E
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC--------------------------c
Confidence 99999865577889999999999999999999998766555677776666552 1
Q ss_pred eeccccCCccccccccccchhhh-hcCCCCH--HHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCC
Q 006328 451 LIGNLQPAHMDFRFFSLGNIWSI-VNGLATR--DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTP 527 (650)
Q Consensus 451 L~g~v~P~~~d~r~~slGN~LAI-~~gLl~~--eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP 527 (650)
++ ||- -+.+.+|++ ..|.++. +.-+.-.+.|++ ++ . +-| +.|....--
T Consensus 296 ~l-------MDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-N-------------Pyy---~~G~~~~GI 346 (427)
T 3qt9_A 296 NF-------MDD--ANVPSLLSIPYLEYKGIEDEVYQNTRKFILS---KN-N-------------RFF---FEGKAAKGI 346 (427)
T ss_dssp EC-------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-S-------------TTE---EECSSCEEE
T ss_pred cc-------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-C-------------Cce---eccCccCcC
Confidence 11 220 124556666 5665443 333444445554 21 1 111 111111111
Q ss_pred cccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHHH
Q 006328 528 WSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSK 603 (650)
Q Consensus 528 ~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~ 603 (650)
.+-|.|...||.+..+..+ +..+..+++++.|..+.+.-..-+ +.|=||-+++... .+...||+=+.|--+.
T Consensus 347 G~PH~~~~~~Wpmsl~~~~-lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~eli 419 (427)
T 3qt9_A 347 GSPHTPDQYIWHIALSMQG-LTTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKF---TRDWFAWSNSLFSHFI 419 (427)
T ss_dssp CCTTSCTTEEEHHHHHHHH-HTCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---SCSCBHHHHHHHHHHH
T ss_pred CCCCCCCCCchHHHHHHHH-hhcCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCcchhhhHHHHHHH
Confidence 2458887666666666554 445778899999988776544445 6999998775433 4458999998864443
No 18
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=94.00 E-value=1.6 Score=50.65 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhC-CCCCCCcccccCCCcccccccCC-CCCchhHHHHHHHHH
Q 006328 291 GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLAD-GFDMFPTLLVTDGSCMIDRRMGI-HGHPLEIQALFYSAL 368 (650)
Q Consensus 291 tLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~-~f~~~~~lLv~dG~~w~D~r~gr-~G~pVEIQALwY~AL 368 (650)
+.|...++++|+++|||.+|+++ ...+-|+.+-+++..- .++...+-++=.|.+=-|. ++. --.+.++|+++.+.|
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~-~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdE-y~e~v~nn~ytn~~a~~~l 506 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLH-EGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADE-YENNVDNNWDTNMLAQWTL 506 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTT-HHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSST-TSCSBSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHh-CChHHHHHHHHHHHHheEEeCCCCEEEEccccCccc-ccCCCCCcHHHHHHHHHHH
Confidence 57888889999999999999864 3578888888887641 1111111110001000111 110 113478999999999
Q ss_pred HHHHHhhCC
Q 006328 369 LCAREMLAP 377 (650)
Q Consensus 369 r~aaeL~~~ 377 (650)
+.+.++++.
T Consensus 507 ~~a~~~~~~ 515 (754)
T 1h54_A 507 KYTLEILGK 515 (754)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999999843
No 19
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=93.28 E-value=1.1 Score=53.03 Aligned_cols=83 Identities=14% Similarity=-0.031 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHh-C-CCCCC--CcccccCCCcccccccCC-CCCchhHHHHHH
Q 006328 291 GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLA-D-GFDMF--PTLLVTDGSCMIDRRMGI-HGHPLEIQALFY 365 (650)
Q Consensus 291 tLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~-~-~f~~~--~~lLv~dG~~w~D~r~gr-~G~pVEIQALwY 365 (650)
..|....+++|+++|||.+|+ + ...|-|+.+.+++.. - .++.. ..-++-..+ +-.+-.+. ---+.++|++..
T Consensus 508 ~aWla~~lweyy~yTgD~~fL-~-~~yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps-~SPE~~~~~~~~~tydn~l~~ 584 (899)
T 2eab_A 508 VPWILQNVYEAYEYSGDPALL-D-RVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVA-YSPEQGPLGTDGNTYESSLVW 584 (899)
T ss_dssp HHHHHHHHHHHHHTTCCHHHH-H-HHHHHHHHHHHHHHHHTCEECCGGGCSSEECSEE-EETTEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHH-H-HHHHHHHHHHHHHHhhheEecCcCCCCeEEEccc-cCCCCCCCCCCCcHHHHHHHH
Confidence 578889999999999999999 3 378999999999876 2 11110 111111110 00010000 002457888877
Q ss_pred HHHHHHHHhhC
Q 006328 366 SALLCAREMLA 376 (650)
Q Consensus 366 ~ALr~aaeL~~ 376 (650)
..|..+.+.++
T Consensus 585 ~ll~~~i~aa~ 595 (899)
T 2eab_A 585 QMLNDAIEAAK 595 (899)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777766653
No 20
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=90.00 E-value=0.91 Score=53.08 Aligned_cols=99 Identities=16% Similarity=0.103 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhCC-CCCCCcccccCCCccccccc---C----CCCCchhHHH
Q 006328 291 GLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADG-FDMFPTLLVTDGSCMIDRRM---G----IHGHPLEIQA 362 (650)
Q Consensus 291 tLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~~-f~~~~~lLv~dG~~w~D~r~---g----r~G~pVEIQA 362 (650)
+.|...++++|+++|||.+|+++ ...+-|+.+.+++..-- ++. ..-++-.+++--|... + .---+.+.|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~-~~~p~l~e~A~F~~~~l~~~~-~g~y~i~p~~sPE~~~~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRD-TAYPIMKEAALFCLDWLIENE-AGYLVTSPSTSPEQRFRIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHH-THHHHHHHHHHHHHHHCEECT-TSCEECSSBCBTTBCEEETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHh-hchHHHHHHHHHHHHhhEECC-CCcEEECCCCcccccccCCCcccccccChHHHHH
Confidence 57888999999999999999875 36899999999987521 111 1112222221112100 0 1113578999
Q ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 006328 363 LFYSALLCAREMLAPEDGSADLIRALNNR 391 (650)
Q Consensus 363 LwY~ALr~aaeL~~~~~g~~~~a~~~~~r 391 (650)
++...|+.+.++++.++-+.++.+++++.
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~ 556 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSIDEDFVKALSDA 556 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 99999999999887655555555444433
No 21
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=86.15 E-value=18 Score=37.45 Aligned_cols=99 Identities=4% Similarity=-0.251 Sum_probs=51.8
Q ss_pred CChHHHHHHHHHHHHHH-hCCHhHHHhhhHHHHHHHHHHHHHhCCCCCCCcccccCCCcc-cccccCCCCCchhHHHHHH
Q 006328 288 VDSGLWWIILLRAYGKC-SGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCM-IDRRMGIHGHPLEIQALFY 365 (650)
Q Consensus 288 VDAtLWfIial~~Y~~~-TGD~~f~e~~e~~~~i~~IL~~~l~~~f~~~~~lLv~dG~~w-~D~r~gr~G~pVEIQALwY 365 (650)
.|.++ .|+++.+-++. |||..+.+ ..+.++++++..-.+. .+++.. .+ .|.........++.||++.
T Consensus 53 ~~nar-~i~~~a~a~~~~~~~~~~~~------~A~~~~~~l~~~~~~~-~Gg~~~---~~d~dg~~~~~~~~~~~~af~i 121 (388)
T 2gz6_A 53 WLQNR-QVWTFSMLCNQLEKRENWLK------IARNGAKFLAQHGRDD-EGNWYF---ALTRGGEPLVQPYNIFSDCFAA 121 (388)
T ss_dssp HHHHH-HHHHHHHHHHHTCCCHHHHH------HHHHHHHHHHHHSBCT-TSCBCS---EECTTSCBCCCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHhcCCHHHHH------HHHHHHHHHHHhcCCC-CCCEEE---EEcCCCCcccCCcchHHHHHHH
Confidence 34455 34444444455 79987743 4577777776531111 111110 00 1111111135678999998
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 006328 366 SALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWI 405 (650)
Q Consensus 366 ~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~ 405 (650)
.||..+.+... +++ +.+.|.++.+.+.++||.
T Consensus 122 ~al~~~y~~tg----~~~----~l~~A~~~~~~i~~~~~d 153 (388)
T 2gz6_A 122 MAFSQYALASG----EEW----AKDVAMQAYNNVLRRKDN 153 (388)
T ss_dssp HHHHHHHHHHC----CHH----HHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhC----CHH----HHHHHHHHHHHHHHHhcC
Confidence 88877666643 332 346667777778888874
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=60.27 E-value=1.5e+02 Score=31.32 Aligned_cols=247 Identities=10% Similarity=0.031 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHH
Q 006328 294 WIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCARE 373 (650)
Q Consensus 294 fIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aae 373 (650)
.|.++..-++ +|+... ....+.+++++...-++...+++. -+.-.|...+. .+.+|.||....|+.. .+
T Consensus 56 ~i~~~a~a~~-~g~~~~------l~~A~~~~~fl~~~~~D~~~GG~~--~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~ 124 (421)
T 2zbl_A 56 MLHVYSVAAS-MGRPGA------YDLVDHGIKAMNGALRDKKYGGWY--ACVNDQGVVDA-SKQGYQHFFALLGAAS-AV 124 (421)
T ss_dssp HHHHHHHHHH-TTCTTH------HHHHHHHHHHHTTTTBCTTTSSBC--SEEETTEEEEC-CEEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHH-cCChhH------HHHHHHHHHHHHHhccCcCCCeEE--EEeCCCCCcCC-chhHHHHHHHHHHHHH-HH
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceec
Q 006328 374 MLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIG 453 (650)
Q Consensus 374 L~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g 453 (650)
.... ..+.+.+..+.+.+.++||. ++.|||...
T Consensus 125 ~tg~--------~~~l~~a~~~~~~l~~~~~d---------------------------------------~~~Ggf~~~ 157 (421)
T 2zbl_A 125 TTGH--------PEARKLLDYTIEVIEKYFWS---------------------------------------EEEQMCLES 157 (421)
T ss_dssp TTTC--------TTHHHHHHHHHHHHHHHTEE---------------------------------------TTTTEECCE
T ss_pred HhCC--------ccHHHHHHHHHHHHHHHhcc---------------------------------------CCCCCeeee
Q ss_pred -------cccCCccccccccccchhhhhcCCCCH---HHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeC---
Q 006328 454 -------NLQPAHMDFRFFSLGNIWSIVNGLATR---DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITG--- 520 (650)
Q Consensus 454 -------~v~P~~~d~r~~slGN~LAI~~gLl~~---eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~--- 520 (650)
..++..++..-..+-+++.+.--.-++ ++++++++.+.. .+..+-+-+..-- -+++|....+
T Consensus 158 ~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~---~~~~~~~~~l~~~--f~~~~~~~~~~~~ 232 (421)
T 2zbl_A 158 WDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIH---DVARNGDYRVNEH--FDSQWNPIRDYNK 232 (421)
T ss_dssp ECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCC---CCCGGGTTCCCCE--ECTTSCBCTTTTT
T ss_pred ecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH---HhccCCCCchhhh--cCCccccchhccC
Q ss_pred --CCCCCCCcccccCCC--chhhHHHHHHHHHHcCC--H-HHHHHHHHHHHHHhccCCCCc------cccCCCCCccCCC
Q 006328 521 --SDPKNTPWSYHNAGS--WPTLLWQFTVACIKMNR--P-EIAARAVQVAEKRLSRDKWPE------YYDTKRARFIGKQ 587 (650)
Q Consensus 521 --gd~~nrP~SYHNGgv--WP~llg~~~~AllK~G~--~-~~A~~~L~~~e~~l~~~~~pE------lFDG~~g~p~G~~ 587 (650)
...+.+|+..-=|-. |-|++..+..+.-+.|. . +..+.+...++..+...-=+| ++....+.+.-..
T Consensus 233 dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~ 312 (421)
T 2zbl_A 233 DNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRE 312 (421)
T ss_dssp TSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCC
T ss_pred CCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCC
Q ss_pred CchhhHHhHHHHHHHHHhh
Q 006328 588 AQLFQTWSIAGYLVSKILL 606 (650)
Q Consensus 588 ac~~QAWSaA~~L~a~~lL 606 (650)
...|.-++.+.+...|
T Consensus 313 ---k~~w~~aea~~all~l 328 (421)
T 2zbl_A 313 ---RVRWPIVEAMGTAYAL 328 (421)
T ss_dssp ---EEHHHHHHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHHHH
No 23
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=35.42 E-value=2.4e+02 Score=29.03 Aligned_cols=103 Identities=12% Similarity=-0.036 Sum_probs=57.6
Q ss_pred ChHHHH----HHHHHHHHHHh---CCHhHHHhhhHHHHHHHHHHHHHhCCCCCCCc-ccccCCCcccccccCCCCCchhH
Q 006328 289 DSGLWW----IILLRAYGKCS---GDLLVQERIDVQTGIKMILKLCLADGFDMFPT-LLVTDGSCMIDRRMGIHGHPLEI 360 (650)
Q Consensus 289 DAtLWf----Iial~~Y~~~T---GD~~f~e~~e~~~~i~~IL~~~l~~~f~~~~~-lLv~dG~~w~D~r~gr~G~pVEI 360 (650)
+-.+|+ |+++..-++.+ |+..++ ...+.+++++....++...+ ++..- .-.|...+...+-++.
T Consensus 52 ~k~l~~nar~l~~~a~a~~~~~~~~~~~~l------~~A~~~~~fl~~~~~d~~gg~g~~~s--~d~dg~~~~~~~~lyd 123 (402)
T 1fp3_A 52 LKYVWLQGRQVWMYCRLYRKLERFHRPELL------DAAKAGGEFLLRHARVAPPEKKCAFV--LTRDGRPVKVQRSIFS 123 (402)
T ss_dssp CEEHHHHHHHHHHHHHHHHHCGGGCCHHHH------HHHHHHHHHHHHHTBSSTTSCCBCSE--ECTTSCEEECCSSSHH
T ss_pred ccchhhhHHHHHHHHHHHHHhcccCCHHHH------HHHHHHHHHHHHhccCcCCCCceEEE--ECCCCCccccccchHH
Confidence 356777 77666555554 887664 34677777777643222111 11100 0012211222466889
Q ss_pred HHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 006328 361 QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDL 407 (650)
Q Consensus 361 QALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~ 407 (650)
||++-.|+..+.+... +.. +.+.+.++-..+.++||.+.
T Consensus 124 ~af~~~a~~~~~~atg----d~~----~~~~A~~l~~~~~~~~~d~~ 162 (402)
T 1fp3_A 124 ECFYTMAMNELWRVTA----EAR----YQSEAVDMMDQIVHWVREDP 162 (402)
T ss_dssp HHHHHHHHHHHHHHHC----CHH----HHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHhC----CHH----HHHHHHHHHHHHHHHhccCC
Confidence 9999999877666642 332 34556666777778888443
No 24
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=32.71 E-value=2.3e+02 Score=29.46 Aligned_cols=103 Identities=12% Similarity=-0.120 Sum_probs=58.0
Q ss_pred cCCCChHHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhCCCCCCCcccccCCCcc-cccccCCCCCchhHHHH
Q 006328 285 VAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCM-IDRRMGIHGHPLEIQAL 363 (650)
Q Consensus 285 ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~~f~~~~~lLv~dG~~w-~D~r~gr~G~pVEIQAL 363 (650)
-++++-++ +++++.++++.|||..+++. -+.+.+|+...-++ +.+++-||.+- .+........=.+-|+.
T Consensus 147 knaisN~~-~~~~la~l~~~tgd~~Yl~~------A~~~~~w~~~~l~d--~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~ 217 (349)
T 3k7x_A 147 KNTPVNAP-FIILSCWLYNELNETKYLEW------AMKTYEWQTKVLVR--EDGFVEDGINRLEDGTIDYEWKFTYNQGV 217 (349)
T ss_dssp EEHHHHHH-HHHHHHHHHHHHCCHHHHHH------HHHHHHHHHHHHBC--TTSCBCCEECTTSSSCBCTTCCCHHHHHH
T ss_pred cchhhHHH-HHHHHHHHHHHhCCHHHHHH------HHHHHHHHHhcCCC--CCCeEecCCccCCCCccCCcCeeeHHHHH
Confidence 45564455 67777777889999987553 45666776552112 22445554321 01101111233567888
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 006328 364 FYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYW 404 (650)
Q Consensus 364 wY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW 404 (650)
+..++..+-+.- +++ ++.+++.+|...+.++||
T Consensus 218 ~l~g~~~LY~~T----~d~----~yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 218 YIGANLELYRIT----KEA----IYLDTANKTAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHHHH----CCH----HHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHhh----CcH----HHHHHHHHHHHHHHHHhc
Confidence 666665444443 333 356777788877777887
No 25
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=28.95 E-value=2e+02 Score=31.86 Aligned_cols=145 Identities=17% Similarity=0.071 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHH-------h--hcCCHHHHHHHHHHHH
Q 006328 162 DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAF-------L--LKGEYDIVRNFILHTL 232 (650)
Q Consensus 162 ~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lgl-------L--~~G~peiar~~L~~l~ 232 (650)
..++++|.++=.+++.-|+.||.|.=-+.=+-..+.......=.+.+.++..|. | .+|++...+.+-+.+.
T Consensus 124 ~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~ 203 (511)
T 1dl2_A 124 TVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYE 203 (511)
T ss_dssp HHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHH
Confidence 578899999999999888768877532210000111101111134566666552 2 4788876555544444
Q ss_pred HhhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHH
Q 006328 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQE 312 (650)
Q Consensus 233 ~LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e 312 (650)
.+...... .....|++|..+- | +. | .+....++-=+.+||- +=.++..|... +|..+.+
T Consensus 204 ~l~~~~~~---~~~~~GL~p~~i~----~-~t----g------~~~~~~~~lGa~~DS~--YEYLlK~~il~-~d~~y~~ 262 (511)
T 1dl2_A 204 PLYKNNDL---LNTYDGLVPIYTF----P-DT----G------KFGASTIRFGSRGDSF--YEYLLKQYLLT-HETLYYD 262 (511)
T ss_dssp HHHHHHTH---HHHHTTCCBSEEC----T-TT----C------CBCSCCBCSSTTTHHH--HHHHHHHHHHH-CCHHHHH
T ss_pred HHHhcccc---cCCCCCCcceEEc----C-CC----C------CccCCeeeecCCCCcH--HHHHHHHHHhc-CCHHHHH
Confidence 44332200 0015799998441 1 10 0 1111111112345553 45666666655 8888755
Q ss_pred hhhHHHHHHHHHHHHHh
Q 006328 313 RIDVQTGIKMILKLCLA 329 (650)
Q Consensus 313 ~~e~~~~i~~IL~~~l~ 329 (650)
. +..++..|.+.+..
T Consensus 263 m--~~~a~~~i~~~L~~ 277 (511)
T 1dl2_A 263 L--YRKSMEGMKKHLLA 277 (511)
T ss_dssp H--HHHHHHHHHHHTEE
T ss_pred H--HHHHHHHHHHHhcc
Confidence 3 67888888888764
No 26
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=26.06 E-value=64 Score=25.29 Aligned_cols=28 Identities=4% Similarity=0.205 Sum_probs=24.0
Q ss_pred cchhhHHHHHHHhhcCCHHHHHHHHHHHH
Q 006328 204 FIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (650)
Q Consensus 204 wgRDt~Is~lglL~~G~peiar~~L~~l~ 232 (650)
|.|+.+|.+|.. ..|+.+.+.++|+.|.
T Consensus 23 Fsr~~ai~AL~~-a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 23 YAFEEVKRALEI-AQNNVEVARSILREFA 50 (52)
T ss_dssp CCHHHHHHHHHH-TTTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHH-hCCCHHHHHHHHHHhc
Confidence 569999999975 6789999999999873
No 27
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.70 E-value=75 Score=25.00 Aligned_cols=28 Identities=7% Similarity=0.189 Sum_probs=24.3
Q ss_pred cchhhHHHHHHHhhcCCHHHHHHHHHHHH
Q 006328 204 FIRDFIPSGIAFLLKGEYDIVRNFILHTL 232 (650)
Q Consensus 204 wgRDt~Is~lglL~~G~peiar~~L~~l~ 232 (650)
|.|+.+|.+|.. ..|+.|.+.++|+.|.
T Consensus 21 F~r~~ai~AL~~-a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 21 YSYQDIQKALVI-AHNNIEMAKNILREFS 48 (53)
T ss_dssp CCHHHHHHHHHH-TTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHH-hcCCHHHHHHHHHHhc
Confidence 569999999975 5789999999999885
No 28
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=23.37 E-value=2.7e+02 Score=29.11 Aligned_cols=102 Identities=10% Similarity=-0.031 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHHHhCCHhHHHhhhHHHHHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHH
Q 006328 289 DSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSAL 368 (650)
Q Consensus 289 DAtLWfIial~~Y~~~TGD~~f~e~~e~~~~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~AL 368 (650)
+.+. .|.++..-++.+|+..+++ ..+.+++++...-++...+++. ..+.|.+....-..++.||+.-.||
T Consensus 53 ~n~r-~i~~~a~a~~~~g~~~~l~------~A~~~~~fl~~~~~d~~~Gg~~---~~~~dG~~~~~~~~lyd~Af~i~al 122 (402)
T 3gt5_A 53 SSTR-FVFNYAMAYLQFGTAEYLD------AVHHGLSYVRDVHRNPATGGYA---WTLCDDRVEDDTNHCYGLAFVMLAY 122 (402)
T ss_dssp HHHH-HHHHHHHHHHHHCCHHHHH------HHHHHHHHHHHTTBCTTTSCBC---SEEETTEEEECCEEHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHhhCChHHHH------HHHHHHHHHHHhCccCCCCcEE---EEeeCCCCCcCCcchHHHHHHHHHH
Confidence 3444 4555555556689887743 3466777776632111101110 0111221111225589999988887
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 006328 369 LCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRK 409 (650)
Q Consensus 369 r~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~ 409 (650)
..+. .. ++++ +.+.|.++-+.+.++||.+..+
T Consensus 123 ~~~~-~t----gd~~----~l~~A~~l~~~i~~~f~d~~~G 154 (402)
T 3gt5_A 123 SCGL-KV----GIKQ----AREWMDETWCLLERHFWDAEYG 154 (402)
T ss_dssp HHHH-HT----TCTT----HHHHHHHHHHHHHHHTEETTTT
T ss_pred HHHH-Hh----CChh----HHHHHHHHHHHHHHHhcCCcCC
Confidence 7633 22 2332 2356677777888999975433
No 29
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=22.41 E-value=7e+02 Score=26.50 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=56.3
Q ss_pred CcccccCCCch----hhHHHHHHHHHHcCCH---HHHHHHHHHHHHHhccCCCCccccCCC-CCccCCCCchhhHHhHHH
Q 006328 527 PWSYHNAGSWP----TLLWQFTVACIKMNRP---EIAARAVQVAEKRLSRDKWPEYYDTKR-ARFIGKQAQLFQTWSIAG 598 (650)
Q Consensus 527 P~SYHNGgvWP----~llg~~~~AllK~G~~---~~A~~~L~~~e~~l~~~~~pElFDG~~-g~p~G~~ac~~QAWSaA~ 598 (650)
--.|++.+.|. |++..+.+.+.-.+.. +.|.++...+.+++..++.| +||-.. ..+..+. .+-|-|+++
T Consensus 235 ~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~p-ywdt~~~~~~~~~~--D~Sa~aiaA 311 (397)
T 2zzr_A 235 RQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVS-YWDLIFTDGSGQPR--DTSATATAV 311 (397)
T ss_dssp TTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCC-BSBTTCCTTSCCCB--CHHHHHHHH
T ss_pred ccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCc-cccCCCCCCCCCcC--CCCHHHHHH
Confidence 44889999994 8888888877777754 55666656666676555555 555422 1222222 255566655
Q ss_pred --HHHHHHhhcCCCCcc--cccccccHhhHhhhhhhc
Q 006328 599 --YLVSKILLADPSAAK--ILTTEEDSELVNAFSCMI 631 (650)
Q Consensus 599 --~L~a~~lL~~p~~~~--~~~~~~~~~~~~~~~~~~ 631 (650)
+|++.+++.+..... .... -..++.+++...
T Consensus 312 ~~Ll~L~~~~~~~~~~~~~Y~~~--A~~~l~~l~~~y 346 (397)
T 2zzr_A 312 CGIHEMLKYLPEVDPDKETYKYA--MHTMLRSLIEQY 346 (397)
T ss_dssp HHHHHHHTTSCTTCTTHHHHHHH--HHHHHHHHHHHT
T ss_pred HHHHHHHHhcCccchhhHHHHHH--HHHHHHHHHHHH
Confidence 566666664322222 2221 125566666544
Done!