Citrus Sinensis ID: 006329

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFSCMISANPRRKRGRKNLNQTYII

ccHHHHHHHHHHcccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccHHccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccEEcccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHcccccccccccHHHHHHcccccccEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccccccccc

ccHHHHHHHHHccccccccccccHccccccccccHHHHHHHccccccccEEEEcccccHcccccccccccccccccccEEcccEEEEEcccccccccccEcccccccEEEHHHHccccccccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEccccEEEEEEccccccccccHcHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccccEEEcccccHHHEcccccccHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHccccHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHcccccccEccHHHHHHHHHHHHHHHHHHHHHHcHHHccEEEccccHHHHHHHHHHHccccccccccHHcccEEEc

MGTSEAVLQVLSGanpllfnsakcsgnldatfpsrflyKYTKKRVSRYKRLFncsstlqsdlglnwlkglgyglsgcrevnrLQLLSckcqqaesvsgltaedgngtwfvdsakklnlksvantpnilefqDVQQFEQEKksftsngaagttidSVSKATVDCLEDEAWNLLRDSMVYycgspigtiaandptssnvlnydqvfiRDFIPSGIAFLLKGEYDIVRNFILHTLQlqswektmdchspgqglmpasfkvrtvpldgddsateevldpdfgeaaigrvapvdsgLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLadgfdmfptllvtdgscmidrrmgihghpLEIQALFYSALLCARemlapedgsADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRykteeysydavnkfniypdqippwlvewmpnkggylignlqpahmdfRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADmplkicypalegqewqiitgsdpkntpwsyhnagswptLLWQFTVACIKMNRPEIAARAVQVAEKRlsrdkwpeyydtKRARFIGKQAQLFQTWSIAGYLVSKIlladpsaakiltteeDSELVNAFSCmisanprrkrgrknlnqtyii

MGTSEAVLQVLSGANPLLFNSAKcsgnldatfpsrFLYKYTKKRVSRYKRLFNCSstlqsdlglNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSftsngaagttidsvsKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVaekrlsrdkwpeyyDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFScmisanprrkrgrknlnqtyii

******VLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDV*****************TTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHS****LM**SFKVRT************VLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFSCMI*******************

****EAV*QVLSGANPLLFNSAKCSGNLD*TFPS*F*YKYTKKRVSRYKRLFNCSSTLQ*********************************************************************************************************EDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNA*********************YII

*****AVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNI*******Q*************************VDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFSCMISAN****************

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		650
399138444		650	neutral invertase [Litchi chinensis]	1.0	1.0	0.853	0.0
255582448		663	beta-fructofuranosidase, putative [Ricin	0.998	0.978	0.817	0.0
359486945		714	PREDICTED: uncharacterized protein LOC10	0.996	0.907	0.818	0.0
384371330		663	neutral/alkaline invertase [Manihot escu	0.998	0.978	0.807	0.0
449465541		638	PREDICTED: uncharacterized protein LOC10	0.975	0.993	0.772	0.0
356525551		652	PREDICTED: uncharacterized protein LOC10	0.992	0.989	0.763	0.0
356512768		652	PREDICTED: uncharacterized protein LOC10	0.995	0.992	0.759	0.0
359479382		639	PREDICTED: uncharacterized protein LOC10	0.978	0.995	0.756	0.0
357519691		645	Alkaline/neutral invertase [Medicago tru	0.984	0.992	0.753	0.0
224100641		486	predicted protein [Populus trichocarpa]	0.747	1.0	0.917	0.0

>gi\|399138444\|gb\|AFP23358.1\| neutral invertase [Litchi chinensis]	Back alignment and taxonomy information

 Score = 1160 bits (3000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/650 (85%), Positives = 590/650 (90%)

Query: 1   MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQS 60
           MGTSE  LQ+LSGA   +F S  C  N++ T+PSR  YK  KKR   Y + + CSSTL S
Sbjct: 1   MGTSEMALQILSGAGRWVFTSDLCFCNVNCTYPSRLRYKCMKKRTFEYVKFWRCSSTLHS 60

Query: 61  DLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKS 120
            +G   LKGL  G+ G    NRLQLLSCKCQQAESVSGLTAEDGN TWFVDSA +LN+  
Sbjct: 61  HIGSEQLKGLRCGVFGDTAANRLQLLSCKCQQAESVSGLTAEDGNRTWFVDSANELNING 120

Query: 121 VANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYC 180
             N  NILEF+ VQQFEQEKK  TSNG  GT  ++V KA+V+ +EDEAW+LLRDSMVYYC
Sbjct: 121 GTNATNILEFEGVQQFEQEKKGLTSNGVVGTGRETVHKASVNSIEDEAWDLLRDSMVYYC 180

Query: 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT 240
           GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT
Sbjct: 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT 240

Query: 241 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA 300
           MDCHSPGQGLMPASFKV TVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA
Sbjct: 241 MDCHSPGQGLMPASFKVCTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA 300

Query: 301 YGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI 360
           YGKCSGDL VQER+DVQTGIKMIL+LCLADGFDMFPTLLVTDGSCM+DRRMGIHGHPLEI
Sbjct: 301 YGKCSGDLSVQERVDVQTGIKMILRLCLADGFDMFPTLLVTDGSCMVDRRMGIHGHPLEI 360

Query: 361 QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE 420
           QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE
Sbjct: 361 QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE 420

Query: 421 YSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATR 480
           YSYDAVNKFNIYPDQI PWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGN+WSIV+ LAT 
Sbjct: 421 YSYDAVNKFNIYPDQISPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNLWSIVSSLATT 480

Query: 481 DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL 540
           DQSHAILDL++ KWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL
Sbjct: 481 DQSHAILDLIDTKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL 540

Query: 541 WQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYL 600
           WQ TVACIKMNRPEI+ARAVQVAE+++SRDKWPEYYDTKRARFIGKQA+LFQTWSIAGYL
Sbjct: 541 WQLTVACIKMNRPEISARAVQVAERQISRDKWPEYYDTKRARFIGKQARLFQTWSIAGYL 600

Query: 601 VSKILLADPSAAKILTTEEDSELVNAFSCMISANPRRKRGRKNLNQTYII 650
           V+K+LLADPSAAKIL TEEDSELVN+FSCMISANPRRKRGRK+  QTYI+
Sbjct: 601 VAKLLLADPSAAKILITEEDSELVNSFSCMISANPRRKRGRKDSKQTYIV 650

Source: Litchi chinensis

Species: Litchi chinensis

Genus: Litchi

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255582448\|ref\|XP_002532011.1\| beta-fructofuranosidase, putative [Ricinus communis] gi\|223528323\|gb\|EEF30366.1\| beta-fructofuranosidase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359486945\|ref\|XP_002264960.2\| PREDICTED: uncharacterized protein LOC100248981 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|384371330\|gb\|AFH77954.1\| neutral/alkaline invertase [Manihot esculenta]	Back alignment and taxonomy information

>gi\|449465541\|ref\|XP_004150486.1\| PREDICTED: uncharacterized protein LOC101217778 [Cucumis sativus] gi\|449516272\|ref\|XP_004165171.1\| PREDICTED: uncharacterized protein LOC101226610 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356525551\|ref\|XP_003531388.1\| PREDICTED: uncharacterized protein LOC100788719 [Glycine max]	Back alignment and taxonomy information

>gi\|356512768\|ref\|XP_003525088.1\| PREDICTED: uncharacterized protein LOC100813457 [Glycine max]	Back alignment and taxonomy information

>gi\|359479382\|ref\|XP_003632264.1\| PREDICTED: uncharacterized protein LOC100854602 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357519691\|ref\|XP_003630134.1\| Alkaline/neutral invertase [Medicago truncatula] gi\|355524156\|gb\|AET04610.1\| Alkaline/neutral invertase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|224100641\|ref\|XP_002311958.1\| predicted protein [Populus trichocarpa] gi\|222851778\|gb\|EEE89325.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		650
TAIR\|locus:2171112		617	INV-E "alkaline/neutral invert	0.775	0.816	0.835	7.4e-240
TAIR\|locus:2027600		616	A/N-InvA "alkaline/neutral inv	0.730	0.771	0.735	1.3e-203
TAIR\|locus:2084329		664	A/N-InvC "alkaline/neutral inv	0.787	0.771	0.668	2e-198
TAIR\|locus:2074434		659	INVH "invertase H" [Arabidopsi	0.78	0.769	0.680	9e-196
TAIR\|locus:2133737		558	CINV2 "cytosolic invertase 2"	0.695	0.810	0.601	1.4e-156
TAIR\|locus:2014676		551	CINV1 "cytosolic invertase 1"	0.690	0.814	0.614	3e-156
TAIR\|locus:2116870		571	A/N-InvB "alkaline/neutral inv	0.693	0.789	0.586	6.7e-152
TAIR\|locus:2199690		534	A/N-InvD "alkaline/neutral inv	0.693	0.844	0.587	5.4e-150
TAIR\|locus:2016064		499	A/N-InvF "alkaline/neutral inv	0.695	0.905	0.575	6.4e-147

TAIR\|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2312 (818.9 bits), Expect = 7.4e-240, P = 7.4e-240
 Identities = 422/505 (83%), Positives = 471/505 (93%)

Query:   146 NGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFI 205
             NG+  +  ++ S  T   +EDEAW+LLR S+V+YCGSPIGTIAANDP S++VLNYDQVFI
Sbjct:   114 NGSVSSNGNAQSVGTKS-IEDEAWDLLRQSVVFYCGSPIGTIAANDPNSTSVLNYDQVFI 172

Query:   206 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGD 265
             RDFIPSGIAFLLKGEYDIVRNFIL+TLQLQSWEKTMDCHSPGQGLMP SFKV+TVPLDGD
Sbjct:   173 RDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGD 232

Query:   266 DSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILK 325
             DS TEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKC+GDL VQER+DVQTGIKMILK
Sbjct:   233 DSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKMILK 292

Query:   326 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLI 385
             LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSAL+CAREML PEDGSADLI
Sbjct:   293 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSADLI 352

Query:   386 RALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMP 445
             RALNNRLVAL+FHIREYYW+DL+K+NEIYRY+TEEYSYDAVNKFNIYPDQIP WLV++MP
Sbjct:   353 RALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMP 412

Query:   446 NKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKI 505
             N+GGYLIGNLQPAHMDFRFF+LGN+WSIV+ LA+ DQSHAILD +EAKWA+LVADMPLKI
Sbjct:   413 NRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLASNDQSHAILDFIEAKWAELVADMPLKI 472

Query:   506 CYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEK 565
             CYPA+EG+EW+IITGSDPKNTPWSYHN G+WPTLLWQ TVA IKM RPEIA +AV++AE+
Sbjct:   473 CYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVELAER 532

Query:   566 RLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVN 625
             R+S DKWPEYYDTKRARFIGKQA+L+QTWSIAGYLV+K+LLA+P+AAK LT+EEDS+L N
Sbjct:   533 RISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRN 592

Query:   626 AFSCMISANPRRKRGRKNLNQTYII 650
             AFSCM+SANPRR RG K   Q +I+
Sbjct:   593 AFSCMLSANPRRTRGPKKAQQPFIV 617

GO:0003824 "catalytic activity" evidence=IEA

GO:0004564 "beta-fructofuranosidase activity" evidence=ISS

GO:0004575 "sucrose alpha-glucosidase activity" evidence=IDA;IMP

GO:0005982 "starch metabolic process" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005987 "sucrose catabolic process" evidence=IDA

GO:0048825 "cotyledon development" evidence=IMP

TAIR\|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
4th Layer	2.4.1.25	LOW CONFIDENCE prediction!
3rd Layer	3.2.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034936001	SubName- Full=Chromosome chr13 scaffold_74, whole genome shotgun sequence; (651 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		650
PLN02703		618	PLN02703, PLN02703, beta-fructofuranosidase	0.0
pfam12899		437	pfam12899, Glyco_hydro_100, Alkaline and neutral i	0.0
PLN03005		550	PLN03005, PLN03005, beta-fructofuranosidase	0.0
PLN02973		571	PLN02973, PLN02973, beta-fructofuranosidase	0.0

>gnl\|CDD\|178306 PLN02703, PLN02703, beta-fructofuranosidase	Back alignment and domain information

 Score = 1003 bits (2595), Expect = 0.0
 Identities = 450/658 (68%), Positives = 517/658 (78%), Gaps = 48/658 (7%)

Query: 1   MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYK---YTKKRVS-----RYKRLF 52
           M  SE VL+V  G+     + +    +          +K   Y +K+V       Y  + 
Sbjct: 1   MAASETVLRVPLGS----LSQSCYLASFFVNSTPNLSFKPVSYNRKKVRCTNSHEYSSVS 56

Query: 53  NCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDS 112
            C              G  +  + C +  +   + CKCQ+ +    + +     T     
Sbjct: 57  ACQDA----------DGSFHSSNECLKGKKFVQMRCKCQKHDVEESIRS-----TLLPSD 101

Query: 113 AKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLL 172
             K +L  +    N               SF+SNG A     SV   +++   DEAW+LL
Sbjct: 102 GLKSDLDEMPLPVN--------------GSFSSNGNA----QSVGTKSIE---DEAWDLL 140

Query: 173 RDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232
           R S+V+YCGSPIGTIAANDP+S++VLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFIL+TL
Sbjct: 141 RQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTL 200

Query: 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGL 292
           QLQSWEKTMDCHSPGQGLMP SFKV+TVPLDGDDS TEEVLDPDFGEAAIGRVAPVDSGL
Sbjct: 201 QLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGL 260

Query: 293 WWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG 352
           WWIILLRAYGKC+GDL VQER+DVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG
Sbjct: 261 WWIILLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG 320

Query: 353 IHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNE 412
           IHGHPLEIQALFYSAL+CAREML PEDGS DLIRALNNRLVAL+FHIREYYW+DL+K+NE
Sbjct: 321 IHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINE 380

Query: 413 IYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWS 472
           IYRY+TEEYSYDAVNKFNIYPDQIP WLV++MPN+GGYLIGNLQPAHMDFRFF+LGN+WS
Sbjct: 381 IYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWS 440

Query: 473 IVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHN 532
           IV+ LAT DQSHAILDL+EAKWA+LVADMPLKICYPA+EG+EW+IITGSDPKNTPWSYHN
Sbjct: 441 IVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHN 500

Query: 533 AGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQ 592
            G+WPTLLWQ TVA IKM RPEIA +AV++AE+R+S DKWPEYYDTKRARFIGKQA+L+Q
Sbjct: 501 GGAWPTLLWQLTVASIKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQ 560

Query: 593 TWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFSCMISANPRRKRGRKNLNQTYII 650
           TWSIAGYLV+K+LLA+P+AAK LT+EEDS+L NAFSCMISANPRR RG K   Q +I+
Sbjct: 561 TWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANPRRTRGPKKAQQPFIV 618

Length = 618

>gnl\|CDD\|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase	Back alignment and domain information

>gnl\|CDD\|178582 PLN03005, PLN03005, beta-fructofuranosidase	Back alignment and domain information

>gnl\|CDD\|178556 PLN02973, PLN02973, beta-fructofuranosidase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		650
PLN02703		618	beta-fructofuranosidase	100.0
PLN02973		571	beta-fructofuranosidase	100.0
PLN03005		550	beta-fructofuranosidase	100.0
PF12899		436	Glyco_hydro_100: Alkaline and neutral invertase; I	100.0
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	100.0
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	100.0
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	100.0
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	100.0
PRK10137		786	alpha-glucosidase; Provisional	99.97
KOG3625		1521	consensus Alpha amylase [Carbohydrate transport an	99.93
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	99.89
PRK13271		569	treA trehalase; Provisional	99.73
PLN02567		554	alpha,alpha-trehalase	99.63
PRK13272		542	treA trehalase; Provisional	99.6
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	99.59
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.53
PRK13270		549	treF trehalase; Provisional	99.51
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	99.51
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	99.49
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	99.39
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	99.26
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	99.14
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	98.64
PF00723		448	Glyco_hydro_15: Glycosyl hydrolases family 15; Int	98.61
KOG2161		849	consensus Glucosidase I [Carbohydrate transport an	98.08
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	98.04
KOG0602		600	consensus Neutral trehalase [Carbohydrate transpor	98.01
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	97.86
COG3538		434	Uncharacterized conserved protein [Function unknow	96.99
KOG2119		879	consensus Predicted bile acid beta-glucosidase [Ca	95.78
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	83.48

>PLN02703 beta-fructofuranosidase	Back alignment and domain information

Probab=100.00  E-value=2.3e-150  Score=1217.18  Aligned_cols=615  Identities=72%  Similarity=1.195  Sum_probs=581.1

Q ss_pred             CchhHHHHHhhcCCCCccccccCCCCCCCcccCcchhhhhhccchhhcccccccchhhhcccccccccCCCcCCC---Cc
Q 006329            1 MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLS---GC   77 (650)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   77 (650)
                      |+|||+|||+++|+++.+++++++|+|+.+..  .|+       +.+|++....+...+....+..||+.+-.++   .+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (618)
T PLN02703          1 MAASETVLRVPLGSLSQSCYLASFFVNSTPNL--SFK-------PVSYNRKKVRCTNSHEYSSVSACQDADGSFHSSNEC   71 (618)
T ss_pred             CchhhhHHhccccccCCcchhhhhhcCCcccc--ccc-------cccccccccccccccceeccCcccccccccccchhh
Confidence            89999999999999999999999999987665  222       6777788788888888888999988875554   45


Q ss_pred             ccccccccccccccccccccCccccCCCCceeeecccccccccCCCCCccccccccchhhhccccccccCCcccccccCC
Q 006329           78 REVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVS  157 (650)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (650)
                      .+.+|+..++||||+++..++..            +..+|+||..|.-.-   -    -...+++++++|+..       
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~-------  125 (618)
T PLN02703         72 LKGKKFVQMRCKCQKHDVEESIR------------STLLPSDGLKSDLDE---M----PLPVNGSFSSNGNAQ-------  125 (618)
T ss_pred             hhhhhHHHHhhhhhhhhhhcccc------------ccccccccccccccc---c----cCcccCcCCCCCccc-------
Confidence            56899999999999999777766            889999998775211   1    125677888887664       


Q ss_pred             cccchHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHHHhhhh
Q 006329          158 KATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSW  237 (650)
Q Consensus       158 ~~~~~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~~LQ~~  237 (650)
                      ++..+++.++||++|++++|+||++|+||+||.|++...+.||++||+||++||++++|++|++||||+||.++++||++
T Consensus       126 ~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq~~  205 (618)
T PLN02703        126 SVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSW  205 (618)
T ss_pred             ccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhhhh
Confidence            44889999999999999999999999999999988643569999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhHH
Q 006329          238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ  317 (650)
Q Consensus       238 ~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~~e~~  317 (650)
                      ++++|+|++++|+||++|||.|+|++++|..++++++||||+++|+|+++|||+|||||++++|.+.|||.+|++++++|
T Consensus       206 ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~~Q  285 (618)
T PLN02703        206 EKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQ  285 (618)
T ss_pred             HHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhhHH
Confidence            99999999999999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 006329          318 TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSF  397 (650)
Q Consensus       318 ~~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~  397 (650)
                      ++|+.||+||++++|+++|+++||||++|+|+||+++|||+|||||||.||||+.+|+.+..+..+.++++..|+..|++
T Consensus       286 ~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~  365 (618)
T PLN02703        286 TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNF  365 (618)
T ss_pred             HHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999998877788999999999999999


Q ss_pred             HHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhhcCC
Q 006329          398 HIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGL  477 (650)
Q Consensus       398 ~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~~gL  477 (650)
                      +++++||++.+++++||||+||+|+++|+|+|||+|++||+||.||||++||||+|||+|+++|||||++||+|||++||
T Consensus       366 hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs~L  445 (618)
T PLN02703        366 HIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL  445 (618)
T ss_pred             HHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHH
Q 006329          478 ATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAA  557 (650)
Q Consensus       478 l~~eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~  557 (650)
                      ++++|+++||++|+++|.+|++.||||+||||+++++||++|+++|+|.||||||||+||+++|++++|++|+|+++.|+
T Consensus       446 at~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~  525 (618)
T PLN02703        446 ATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAE  525 (618)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCccccCCCCCccCCCCchhhHHhHHHHHHHHHhhcCCCCcccccccccHhhHhhhhhhcccCccc
Q 006329          558 RAVQVAEKRLSRDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLADPSAAKILTTEEDSELVNAFSCMISANPRR  637 (650)
Q Consensus       558 ~~L~~~e~~l~~~~~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  637 (650)
                      ++++.++.++..++|||||||++|+|+|++||.+||||||++|+++++|+||+++.+|+++||+++.++++|.+++++|+
T Consensus       526 ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~~~~~~~  605 (618)
T PLN02703        526 KAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANPRR  605 (618)
T ss_pred             HHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeecccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccC
Q 006329          638 KRGRKNLNQTYII  650 (650)
Q Consensus       638 ~~~~~~~~~~~~~  650 (650)
                      |++|+++||+|||
T Consensus       606 ~~~~~~~~~~~~~  618 (618)
T PLN02703        606 TRGPKKAQQPFIV  618 (618)
T ss_pred             cCCCccccCCccC
Confidence            9999999999997

>PLN02973 beta-fructofuranosidase	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		650
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	5e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807	Back alignment and structure

 Score = 61.7 bits (149), Expect = 5e-10
 Identities = 54/418 (12%), Positives = 105/418 (25%), Gaps = 69/418 (16%)

Query: 206 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGD 265
           RD     I+       ++ R  I+  L+ Q                P    V        
Sbjct: 349 RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPT- 406

Query: 266 DSATEEVLDPDFGEAAIG-RVAPVDSGLWWIILLRAYGKCSGDL-LVQERIDVQTGIKMI 323
                 V  P   +   G +    D  LW I  +  Y   +G+     + I    G +  
Sbjct: 407 -----VVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEAS 461

Query: 324 LKLCLADGFDMFPTLLVTDGSCMI---------DRRMGIHGHPLEIQALFYSALLCAREM 374
           +   +    D         G   I         D      G    +  L + AL    + 
Sbjct: 462 VYEHMKAALD---FSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFID- 517

Query: 375 LAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPD 434
           LA   G    +         +      + W                             D
Sbjct: 518 LAKFLGKDQDVNTYTEMAANVREACETHLW-----------------------------D 548

Query: 435 QIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKW 494
               W +  +   G  +         + R     N  ++++GLA++++    +D ++   
Sbjct: 549 DEGGWYIRGLTKNGDKIGT---AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDEH- 604

Query: 495 ADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPE 554
             L +   L +  P+          G   +       N   +        VA  K+ R +
Sbjct: 605 --LFSPYGLHLNAPSF--STPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGD 660

Query: 555 IAARAVQVAEKRLSRDKW----------PEYYDTKRARFIGKQAQLFQTWSIAGYLVS 602
            A +           D             ++   +  +  G+    + T +      +
Sbjct: 661 RAMKFYDALNPYNQNDIIEKRIAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYFA 718

PyMOL of 1v7w

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		650
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	100.0
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	100.0
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	99.97
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	99.97
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	99.97
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.96
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.9
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.87
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	99.82
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	99.82
1gai_A		472	Glucoamylase-471; hydrolase, glycosidase, polysacc	99.37
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	99.37
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	99.32
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	99.32
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	99.09
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	99.02
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	98.98
1h54_A		754	Maltose phosphorylase; hydrolase, maltose metaboli	94.0
2eab_A		899	Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi	93.28
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	90.0
2gz6_A		388	N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C	86.15

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

Probab=100.00  E-value=6.6e-32  Score=290.14  Aligned_cols=344  Identities=15%  Similarity=0.105  Sum_probs=248.0

Q ss_pred             hHHHHHHHHHHHHhhccccCCcceeeeccCCCCCcCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHHH-hhhhhhc
Q 006329          162 DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ-LQSWEKT  240 (650)
Q Consensus       162 ~~~~~~A~~lLr~~~v~~~~~p~G~iAa~d~~~a~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~~-LQ~~~~~  240 (650)
                      +.+.++|+..|+.     |.+..+++++       ..+|...|+||+.+.+++++.. +++.+++.|..++. .|.    
T Consensus         2 ~~l~~~a~~~l~~-----n~~~~~~vP~-------~~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q~----   64 (420)
T 2z07_A            2 APLRTKAVEVLQR-----NSRGAFTVPA-------HGLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQG----   64 (420)
T ss_dssp             -CHHHHHHHHHHH-----HBCSSCBCSS-------TTCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHCC----
T ss_pred             hHHHHHHHHHHHH-----cCCCCCcCCC-------CCCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHh----
Confidence            4588999999998     5444455555       1489999999999999998765 68888887777665 553    


Q ss_pred             cCCCCCCCCCCCCcceeecccCCCCCCCcccccCCC-CCC-CccC-ccCCCChHHHHHHHHHHHHHHhCC----HhHHHh
Q 006329          241 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGE-AAIG-RVAPVDSGLWWIILLRAYGKCSGD----LLVQER  313 (650)
Q Consensus       241 ~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd-~Ge-~~~~-~ygsVDAtLWfIial~~Y~~~TGD----~~f~e~  313 (650)
                            .+|.||+.+  -+...+.     . .-.++ .|. .++. ++.++|.++++++++++|++.|||    .+|+++
T Consensus        65 ------~~G~ip~~v--~~~~~~~-----y-~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~  130 (420)
T 2z07_A           65 ------PDGMLPHIV--FHEQSRD-----Y-FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARY  130 (420)
T ss_dssp             ------TTCCCCSEE--ECCSCCC-----C-C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             ------hCCCcceec--ccCCCcc-----c-CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHH
Confidence                  789999833  2211110     0 00011 111 2222 457899999999999999999999    899875


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCccccc------CCC----cccccc----cC------C--------------------
Q 006329          314 IDVQTGIKMILKLCLADGFDMFPTLLVT------DGS----CMIDRR----MG------I--------------------  353 (650)
Q Consensus       314 ~e~~~~i~~IL~~~l~~~f~~~~~lLv~------dG~----~w~D~r----~g------r--------------------  353 (650)
                        +.+.|+..++|+...+- ...++++.      +|.    .|.|..    .+      |                    
T Consensus       131 --~~p~l~~~~~~~~~~~d-~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~  207 (420)
T 2z07_A          131 --LFPKLLAFHRWLYHARD-PYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRY  207 (420)
T ss_dssp             --HHHHHHHHHHHHHHHHC-TTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHH
T ss_pred             --HHHHHHHHHHHHhcCCC-CCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHH
Confidence              78999999999875210 11223321      232    455430    00      1                    


Q ss_pred             -----------------------CCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 006329          354 -----------------------HGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKL  410 (650)
Q Consensus       354 -----------------------~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~~L~~~~~~~FW~d~~~l  410 (650)
                                             .+.||++||++|.+++.+++|++.++..   ++++.++++++++.|++ ||+++.+.
T Consensus       208 ~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~  283 (420)
T 2z07_A          208 LSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF  283 (420)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred             HHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence                                   1347899999999999999999875443   67789999999999999 99876655


Q ss_pred             hhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHH
Q 006329          411 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLM  490 (650)
Q Consensus       411 ~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~~d~r~~slGN~LAI~~gLl~~eqa~~Vl~~i  490 (650)
                      +..|...                             .     +...+      .....+.+++++++++++++++|++.+
T Consensus       284 ~~d~~~~-----------------------------~-----g~~~~------~~~~~~~~pL~~g~~~~~~a~~v~~~l  323 (420)
T 2z07_A          284 YFSWDLV-----------------------------A-----GEPIA------VKTSAGFLPLFAGTPHQGRASLLAQEA  323 (420)
T ss_dssp             ECCEETT-----------------------------T-----TEECC------CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred             eEeeeCC-----------------------------C-----CCeec------cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence            4332110                             0     00001      124456778999999999999999998


Q ss_pred             HHhhhhhh--cCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 006329          491 EAKWADLV--ADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAARAVQVAEKRLS  568 (650)
Q Consensus       491 ~~~~~eL~--tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~AllK~G~~~~A~~~L~~~e~~l~  568 (650)
                      .    +++  +++||++++|            +++.++|.+||+|++||++.+.++.++.++|+.++|.+++......+.
T Consensus       324 ~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~  387 (420)
T 2z07_A          324 E----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALME  387 (420)
T ss_dssp             H----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             H----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence            6    577  8999999998            455677889999999999999999999999999999888876555555


Q ss_pred             cCCCCccccCCCCCccCCCCchhhHHhHHHHHHH
Q 006329          569 RDKWPEYYDTKRARFIGKQAQLFQTWSIAGYLVS  602 (650)
Q Consensus       569 ~~~~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a  602 (650)
                      ..++.|.||+.+|.|.|   |.+|+||+|.+|.+
T Consensus       388 ~~~~~E~yd~~~g~~~g---~~~fgWs~~~~l~l  418 (420)
T 2z07_A          388 REGFREYYDPLTGQGRG---GEGFSWSAALALFW  418 (420)
T ss_dssp             HHCSEEEECTTTCCEEE---EESCHHHHHHHHHH
T ss_pred             cCCeeeeeCCCCCCcCC---CCCCchHHHHHHHH
Confidence            56788999999987765   45999999998765

PyMOL of 2z07

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3	Back alignment and structure

>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*	Back alignment and structure

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		650
d1v7wa1		531	a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb	1e-13

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 71.5 bits (174), Expect = 1e-13
 Identities = 54/409 (13%), Positives = 107/409 (26%), Gaps = 53/409 (12%)

Query: 157 SKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL 216
           +K  V         ++    +Y        + +   +   V     +  RD     I+  
Sbjct: 32  AKFQVKSPNQGLDTMINAWTLYQA--ETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVP 89

Query: 217 LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD 276
                ++ R  I+  L+ Q                P    V         S T      D
Sbjct: 90  H-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAP-----SKSPTVVPTPSD 143

Query: 277 FGEAAIGRVAPVDSGLWWIILLRAYGKCSGDL-LVQERIDVQTGIKMILKLCLADGFDMF 335
             +    +    D  LW I  +  Y   +G+     + I    G +  +   +    D  
Sbjct: 144 EDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFS 203

Query: 336 PTLLVTDGSCMI------DRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALN 389
              +   G C        D      G    +  L + AL    ++ A   G    +    
Sbjct: 204 AEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFIDL-AKFLGKDQDVNTYT 262

Query: 390 NRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGG 449
                +      + W D                                W +  +   G 
Sbjct: 263 EMAANVREACETHLWDDEGG-----------------------------WYIRGLTKNGD 293

Query: 450 YLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPA 509
            +         + R     N  ++++GLA++++    +D +      L +   L +  P+
Sbjct: 294 KI---GTAQQQEGRVHLESNTLAVLSGLASQERGEQAMDAV---DEHLFSPYGLHLNAPS 347

Query: 510 LEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACIKMNRPEIAAR 558
                  I   +  +       N   +        VA  K+ R + A +
Sbjct: 348 FSTPNDDIGFVT--RVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMK 394

PyMOL of d1v7wa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		650
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	99.94
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.9
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	99.85
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	99.84
d2fbaa1		492	Glucoamylase {Yeast (Saccharomycopsis fibuligera)	99.14
d1gaia_		472	Glucoamylase {Aspergillus awamori, variant x100 [T	98.92
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	98.09
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	97.91
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	92.12

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]

Probab=99.94  E-value=7.1e-26  Score=237.88  Aligned_cols=361  Identities=15%  Similarity=0.081  Sum_probs=238.7

Q ss_pred             chHHHHHHHHHHHHhhccccCCcce-eeeccCCCC------CcCCCCCcccchhhHHHHHHHhhcCCHHHHHHHHHHHHH
Q 006329          161 VDCLEDEAWNLLRDSMVYYCGSPIG-TIAANDPTS------SNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ  233 (650)
Q Consensus       161 ~~~~~~~A~~lLr~~~v~~~~~p~G-~iAa~d~~~------a~~~nY~~vwgRDt~Is~lglL~~G~peiar~~L~~l~~  233 (650)
                      ..+++++++-.|+.++   +.++.| ++|+.+++.      ..-+.|.-+|+||++|++.+++..|++++++.+|..+++
T Consensus         7 ~~~~~~~s~~~lk~~~---~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~   83 (397)
T d1lf6a1           7 ANSLYYNSMMILKASE---DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK   83 (397)
T ss_dssp             CCHHHHHHHHHHHTTB---CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcc---CCCCCceEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            4689999999998642   234444 555533221      012469999999999999999999999999999999998


Q ss_pred             hhhhhhccCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCChHHHHHHHHHHHHHHhCCHhHHHh
Q 006329          234 LQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER  313 (650)
Q Consensus       234 LQ~~~~~~d~~~~~~GliP~~fki~h~~~r~~~~~~~~~l~pd~Ge~~~~~ygsVDAtLWfIial~~Y~~~TGD~~f~e~  313 (650)
                      .|.          .+|.+|.++-      .            + |... +.....|++.|+++++++|.+.+....    
T Consensus        84 ~~~----------~~G~~~~~~~------~------------~-G~~~-~~~~q~D~~g~~i~a~~~~~~~~~~~~----  129 (397)
T d1lf6a1          84 VVK----------DNGMIPQNTW------I------------S-GKPY-WTGIQLDEQADPIILSYRLKRYDLYDS----  129 (397)
T ss_dssp             HHH----------HHSSCCSCBC------T------------T-SCBC-CCCCCHHHHHHHHHHHHHTTCGGGTTT----
T ss_pred             Hhc----------ccCCCCCCCC------c------------C-CCcc-ccCCCCchHHHHHHHHHHHHhcchhHH----
Confidence            876          4577888651      1            1 1111 123478999999999999976544333    


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCcccccCCCcccccccCCCCCchhHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 006329          314 IDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLV  393 (650)
Q Consensus       314 ~e~~~~i~~IL~~~l~~~f~~~~~lLv~dG~~w~D~r~gr~G~pVEIQALwY~ALr~aaeL~~~~~g~~~~a~~~~~ra~  393 (650)
                           .|+.+++++....       ..++...|..    +.|+..++++++|.||++++.|+.. .++...+..+.+.+.
T Consensus       130 -----~i~~~~~~l~~~~-------~~~~~~lWEe----~~g~~~~t~~~~~~aL~~~a~la~~-~g~~~~a~~~~~~A~  192 (397)
T d1lf6a1         130 -----LVKPLADFIIKIG-------PKTGQERWEE----IGGYSPATMAAEVAGLTCAAYIAEQ-NKDYESAQKYQEKAD  192 (397)
T ss_dssp             -----THHHHHHHHHHHC-------SSBSSCTTSS----CCBBCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHhC-------CCCccccccc----cCCcccchhHHHHHHHHHHHHHHHh-cCChhHHHHHHHHHH
Confidence                 3566667766421       1233345653    4678899999999999999999986 677888999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhcccccchhhhhcccCCCCCCCCcccccccCCCCcceeccccCCc---cccccccccch
Q 006329          394 ALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAH---MDFRFFSLGNI  470 (650)
Q Consensus       394 ~L~~~~~~~FW~d~~~l~~iy~~~~e~y~~~a~n~fn~~pd~ip~~l~~f~~~~ggYL~g~v~P~~---~d~r~~slGN~  470 (650)
                      .|+..|.++||.+.......      .|...  ..-+..++             .+......++..   .+..+++ ..+
T Consensus       193 ~i~~~i~~~~~~~~~~~~~~------~~~~r--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~lDa-sll  250 (397)
T d1lf6a1         193 NWQKLIDNLTYTENGPLGNG------QYYIR--IAGLSDPD-------------ADFMINIANGGGVYDQKEIVDP-SFL  250 (397)
T ss_dssp             HHHHHHHHHHEESSCSSTTS------CEECS--CBSSSCTT-------------SCCEEEETTTTEEEEGGGCCCG-GGG
T ss_pred             HHHHHHHHhccCcccccccc------cceec--cccccCcc-------------ccccccccccccccccCCCcCH-HHh
Confidence            99999999999876543221      00000  00000000             011111111110   0101122 233


Q ss_pred             hhhhcCCCCH--HHHHHHHHHHHHhhhhhhcCCCCccccCCcCCCCceeeeCCCCCCCCcccccCCCchhhHHHHHHHHH
Q 006329          471 WSIVNGLATR--DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQFTVACI  548 (650)
Q Consensus       471 LAI~~gLl~~--eqa~~Vl~~i~~~~~eL~tp~pLRtl~Pp~~d~~wr~~t~gd~~nrP~SYHNGgvWP~llg~~~~All  548 (650)
                      ++++++++++  ++....++.+.+   +|..+.|+....|......|   +.....+.+..+|+|+.||.....++.+++
T Consensus       251 ~~~~~g~~~~~d~~~~~tl~~i~~---~l~~~~g~~~~~~RY~~D~y---~~~~~~~~~~~~~~g~pW~i~T~~~a~~~~  324 (397)
T d1lf6a1         251 ELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRYNHDGY---GEPSKTELYHGAGKGRLWPLLTGERGMYEI  324 (397)
T ss_dssp             HHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSSTTCCC---SCSBTTBCCSSSSCCCBBHHHHHHHHHHHH
T ss_pred             hccccCCCCCCCHHHHHHHHHHHH---HhccCCCccccccccccccc---cccCCcCCccCCcCCchHHHHHHHHHHHHH
Confidence            4567776554  555556667776   88888888876663222221   112233456677777777777777888888


Q ss_pred             HcCCHHHHHHHHHHHHHHhccCC-CCccccCCCCCccCCCCchhhHHhHHHHHHHHHhhc
Q 006329          549 KMNRPEIAARAVQVAEKRLSRDK-WPEYYDTKRARFIGKQAQLFQTWSIAGYLVSKILLA  607 (650)
Q Consensus       549 K~G~~~~A~~~L~~~e~~l~~~~-~pElFDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~  607 (650)
                      +.|+  +|++.|+.+..+....+ +||.||+.+|.|.|.  +.+||||.|++|++.+.++
T Consensus       325 ~~g~--~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~--a~plaWS~A~~i~~~~~l~  380 (397)
T d1lf6a1         325 AAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI  380 (397)
T ss_dssp             HTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred             HccH--HHHHHHHHHHHhcCCCCccceeecCCCCCcCCC--CccHHHHHHHHHHHHHHHh
Confidence            8885  58888887777655555 899999999988864  3489999999999888776

PyMOL of d1lf6a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]}	Back information, alignment and structure

>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure